CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022315	Virgibacillus phasianinus strain LM2416 chromosome, complete genome	3 crisprs	DEDDh,RT,DinG,csa3,cas3,WYL,c2c10_CAS-V-U3	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022315_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022315_1

334276-334378

Orphan

Consensus_repeat	Method
TAGTGTAGTGGGGGACTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022315_1

>merge|NZ_CP022315|1|334276-334378|CRISPRCasFinder
TAGTGTAGTGGGGGACTGTCCCCAACAAAAAAGCTTACCTCCATGGAGATAAGCTTTTCGCTTAAGGCGCTTTAACACATTAGCGTAGTGGGGGACTGTCCCC

>NZ_CP022315|1|1|334276-334378|CRISPRCasFinder
TAGTGTAGTGGGGGACTGTCCCC	AACAAAAAAGCTTACCTCCATGGAGATAAGCTTTTCGCTTAAGGCGCTTTAACACAT
TAGCGTAGTGGGGGACTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022315.1\|WP_089060275.1\|328963_330433_-\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|273981
NZ_CP022315.1\|WP_089063504.1\|339780_340239_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP022315.1\|WP_089060276.1\|330784_331216_-\|DUF4064-domain-containing-protein	unknown	unknown	gnl\|CDD\|372544
NZ_CP022315.1\|WP_089060284.1\|340622_341114_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022315.1\|WP_089060277.1\|331361_332408_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022315.1\|WP_089060282.1\|336684_338454_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP022315.1\|WP_089060283.1\|338610_339846_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP022315.1\|WP_089060286.1\|341657_342200_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP022315.1\|WP_089060279.1\|333655_334138_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022315.1\|WP_089060274.1\|328337_328844_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022315.1\|WP_172840441.1\|332780_332930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022315.1\|WP_089060288.1\|342819_343422_-\|diphthine--ammonia-ligase	unknown	unknown	gnl\|CDD\|238952
NZ_CP022315.1\|WP_089060281.1\|335954_336695_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP022315.1\|WP_089060278.1\|332999_333509_-\|DUF664-domain-containing-protein	unknown	unknown	gnl\|CDD\|368218
NZ_CP022315.1\|WP_089060287.1\|342332_342737_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP022315.1\|WP_089060272.1\|326995_327412_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP022315.1\|WP_172840440.1\|332459_332609_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379389
NZ_CP022315.1\|WP_089060280.1\|334382_335822_-\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|224877
NZ_CP022315.1\|WP_089060285.1\|341142_341388_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022315.1\|WP_089060273.1\|327467_328226_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008

Protein	Function_ID	Function_description	E-value
NZ_CP022315.1\|WP_089060275.1\|328963_330433_-\|sodium/proline-symporter-PutP	gnl\|CDD\|273981	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP022315.1\|WP_089063504.1\|339780_340239_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.13745e-27
NZ_CP022315.1\|WP_089060276.1\|330784_331216_-\|DUF4064-domain-containing-protein	gnl\|CDD\|372544	pfam13273, DUF4064, Protein of unknown function (DUF4064).	2.01119e-05
NZ_CP022315.1\|WP_089060284.1\|340622_341114_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.04384e-07
NZ_CP022315.1\|WP_089060282.1\|336684_338454_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	0
NZ_CP022315.1\|WP_089060283.1\|338610_339846_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.95234e-47
NZ_CP022315.1\|WP_089060286.1\|341657_342200_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	7.48356e-32
NZ_CP022315.1\|WP_089060279.1\|333655_334138_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.18263e-17
NZ_CP022315.1\|WP_089060274.1\|328337_328844_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.94457e-14
NZ_CP022315.1\|WP_089060281.1\|335954_336695_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.27547e-59
NZ_CP022315.1\|WP_089060278.1\|332999_333509_-\|DUF664-domain-containing-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	1.03392e-07
NZ_CP022315.1\|WP_089060287.1\|342332_342737_-\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	2.31802e-12
NZ_CP022315.1\|WP_089060272.1\|326995_327412_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	7.71019e-09
NZ_CP022315.1\|WP_172840440.1\|332459_332609_-\|hypothetical-protein	gnl\|CDD\|379389	pfam13829, DUF4191, Domain of unknown function (DUF4191).	0.00465793
NZ_CP022315.1\|WP_089060280.1\|334382_335822_-\|carbon-starvation-protein-A	gnl\|CDD\|224877	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms].	8.47073e-118
NZ_CP022315.1\|WP_089060288.1\|342819_343422_-\|diphthine--ammonia-ligase	gnl\|CDD\|238952	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	2.68987e-53
NZ_CP022315.1\|WP_089060273.1\|327467_328226_-\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.00281267

>NZ_CP022315.1|WP_089060279.1|333655_334138_-|GNAT-family-N-acetyltransferase
MTVTLLPMTQDDFAHYTSKSIQSYASEKVEAGTWTKEEAPEKSEKEFERLLPEGLDSEYQNLFAITKVDNDKKVGWLWYHFKPENPQKEAFIYDFLIFDEYQGQGYGKAALKALDDYALANGIEKISLHVFAHNKRAIHLYEKLNYEAKDLIMSKWLNEE
>NZ_CP022315.1|WP_089060278.1|332999_333509_-|DUF664-domain-containing-protein
MEFKVKEIENYSPQIGHLVSMMNYVRLTTLQAVKGLTTEQLDFLPTENSNSIGALLLHMAAVEFGFQLETFDERKPNKQEGMEWGAAYELGDQGRNEINGNPLEYYLNKLETVRNRTLSEFQKRDDDWLYSSCTWEGFQANNYFIWFHTFEDEINHRGQIRIQRKLLPK
>NZ_CP022315.1|WP_172840441.1|332780_332930_-|hypothetical-protein
MKYDGGVAFIGCMFLGIGVGMLFGEIAIGTLIGMGVGFLALSFQSKRPN
>NZ_CP022315.1|WP_172840440.1|332459_332609_-|hypothetical-protein
MMRFDRGIIVFVGCMLLGIGLGILFGGAAVGTLIGMGTGLLAMFFTKRA
>NZ_CP022315.1|WP_089060277.1|331361_332408_+|hypothetical-protein
MIALSKSKWIWYFLLVSLIFAANSALYYSPVYDSVPSLAVWGSVFDLMFMIPLLTYLLILRRRYPFKYLGGVVLACYLLANLVIPSQHMQQITMFSYLIIAFESIFVCLELYILFTIIVKLPRIISSFRSNNTVPYFYTKAINAYSDHLSVNRMAEVLLSEMSLFYYALFSWRKKVPEAADNYFTYHKNSSVITIYIMLIHATVLETVGLHYLLHEWNVIISWGILGLNAYGVLFFIGEINAIRLSPFIIQHKRLYMQVGLTKSAVIPFDSIEQLRTYEGPEKLSKSDQKRTMDATVKDIFNNKPSLEIVLREKIVVRYMYGFKKSVDRILLNVDNDESFRTALTRED
>NZ_CP022315.1|WP_089060276.1|330784_331216_-|DUF4064-domain-containing-protein
MKRTGEVTLGIIGAFFYAFFAIIGAVMVWVENNREQVESFFREAAAQDPSASISMTDLNDALDAVGNSGLILTIISVVAIILGIISMIFLKGNKKPKAAGIILIVTAVVVAFISYGAGIIAGIFYLIAGIMALARKPKTIIYE
>NZ_CP022315.1|WP_089060275.1|328963_330433_-|sodium/proline-symporter-PutP
MEVGVFISLGIYMVGMLLIGYYSYRKTKNLSDYMLGGRGLGPAVTALSAGASDMSGWMVMGLPGAMYMTGLASAWLAIGLTIGAYVNYLILAPRLRTYTEVAQDSITIPDYLENRFFDSSNVLRLVSGIFILIFFALYACAGMVSGGKLFESAFGLDYHIGLFLTVAVIVAYTLFGGFLAVSMTDFVQGVIMFVALILVPIVALTNVGGTETMLDDIRQIDPSLLDFFKGTSVLGIISFLAWGLGYFGQPHIIVRFMAISSVKELKTARRIGIGWMIISIIGAMLVGLIGVSYFSDKPDMLGDPETVLIVFAEVLFNPYITGFILAAILAAIMSTVSSQLLVTSSAVTEDFYRTFFRRNASDKELVLVGRLAVLGVAIVALILAYTPNDTILGLVGNAWAGFGAVFGPVVLLSLYWKRMTKWGALAGMIAGGITVIVWLSIPGLSDWLYEIIPGFILSLLAVIVVSNMTKNPEKQVQEQFEQMEQKMKE
>NZ_CP022315.1|WP_089060274.1|328337_328844_-|GNAT-family-N-acetyltransferase
MEIKLLTATDAENYWNLRLEALKQCPEAFATSYEEAISRKNPIEQVAQNLDVKGNYTFGAFENNTLMGMVTLMKERHQKLQHRANIFAMYVTPKKQGKGIGKSLLQEVIETAKLTDEIEKLNLTVVKTNKKAKQLYSTLGFQTFGLEEKALKINGSYYDEEYMALVIK
>NZ_CP022315.1|WP_089060273.1|327467_328226_-|hypothetical-protein
MALFINNGSHGDIYKNKGAIDEPNQSYFKRDHFEELVNGQLKVNESLNHSIHGLKVLYEKQENAQTGKWKEISNRLNELKRINVQHEKDQHYVLERLRNLESQNKKLEVTLANEQLSGKELMDQLNKLGNSHQAIVEQLETYCLENEVFKSKVNDQYELQHQMADRISQHEDAHGKVLDRLENQEALMEKVTRQIEYFRTILFERTNFLAEKIENGYHHTSSYIANLITGSDQSPKKFMLNQKQDEDHKVHK
>NZ_CP022315.1|WP_089060272.1|326995_327412_-|VOC-family-protein
MNGKIYRVGTIYIPVRDPYKSASWYQKVLGAVVNFQDEQKTILDFANQSVFLVKAKADEKLNFTDANGYEHFTVTFEVNGEKELEDLHNTFKEGGVKIGDIEDRGHPGRNFIFYDLDGNKFDVWSELSPDYIKRYNID
>NZ_CP022315.1|WP_089060280.1|334382_335822_-|carbon-starvation-protein-A
MVTFLVSIALLIVGYFTYGKYVEKVFGSNTNRRTPAYSMADDVDYVPMNTKKNSLIQLLNIAGVGPIFGPILGALYGPVAFLWIVLGAIFAGAVHDYLTGMISIRNRGAHLPELAGKFLGKGMKHVVNAFSVLLLLLVGTVFVTAPATLLHDLASNWVGLGVIVAAIFIYYIMATILPVDKIIGKVYPLFGALLLISAAGVGIGLIVTGAPIPEMNLTNMHPDNLPIFPLLFLTVSCGALSGFHATQSPIISRTTENESQGRKIFYGMMIAEAIIAMIWAAAAMSLFSGNELNEILAAGGPAAVVSEVSIRMLGAIGGTLAILGVIVLPITSGDTSFRGLRMIVADYFKIGQKKVLNRIWIIVPFFALSFALTKIDFNLLWRYFSWANQSTAMIALWVGAMYLMLAKKNYWIAFIPAVFITMATMSYIFYAEIGFGLPINISYVVAAVITTVIIGLFYRSANKQKQKTIALDDGMDKVA
>NZ_CP022315.1|WP_089060281.1|335954_336695_-|response-regulator-transcription-factor
MSSKKLKVIIIDDELYSREELKHLLSNHPSIMIVAEAESGEKGLEKSLTLKPDILFVDIEMSDMSGMEMVAALDNMKNPPKVVFATAYSDYAVKAFRYGAVDYLLKPFSDEEVAETVQRLEKIVFVSDEKRVNKEKPNGKLAVEEDGKIVYLTPQDVIYCNHQQRETVIHTKQHTYHVKSTLKELEVKLAGYSFYRTHKSFLVNLKEVEQLIPWFNGAYELKLNNLEEKIPVSRNYVKTLREQLEL
>NZ_CP022315.1|WP_089060282.1|336684_338454_-|sensor-histidine-kinase
MWNLLLLMLERIGIIVTVAFLMTRVRYFRTVIHQRDVTDRQRLPVMIMFGLFGILGTYTGLVVSTNSLGLSSWAMGLDENEAIANSRVIGIVIAGLIGGWKIGFGAGLIAGIHRYMLGGFTAFSCSISGILAGLLAGLVHKRLQKSRRYVPPVVALIVGGLAEALQMGLILLISRPFDQAYQLVAEIGLPMIVANGIGTAIFVLVISSVFHEEEKMGAIQAQKALRLAEMTIGHLRQGLSTKTAEATCNILLKEVQASAVAITNQQVILAHVGVASDHHQPNQQIQTEGTQHVLHEGKLLIADKDAINCHYQDCPLDQAVIAPLKRKSETVGTLKFYFQNEKDISTVTIEFIKGLSSLLSQQLEIADADRYFQLMKEAEIKALQAQVSPHFLFNALNTIVSLVRIDPDKARKLLISLSRYFRKNLESSTHPMTTLSQEFEHVNAYLSIEKERFIEKMEVFYEVEDEKVMGHKIPTMTLQPLVENALKHGMKGLTMKGTITISVQKQGPGVLVTVKDNGKGIRKERMNELLHKPISSETGTGIGLYNVNRRLEMMFGKGSMLDIRSSEGKGTAVRFYLSSESKGGRNDVQ
>NZ_CP022315.1|WP_089060283.1|338610_339846_+|MFS-transporter
MYSTIIQNKNIRYYLIGGGVSRLGDVLSGMAFLFLAYDLTGSAIHTTGMAIAETVPYLLFGLIGGVIADWLPRKRLLIILDCIRIPLVFSVVLFHHFNIMSYAYLLLVSFLIQSIGCFFNPAHRAVLPLITKPSDRTAVNSLNDTVGRGVTVLSPIISVWLLSYGVIYFFVLDALTYFASVFCLTRLYFTEHNMQTEKSVSHVFLAIKEFFIWLKGQQTLKCLFILTFIVVFFNTWVWEVGLLLALTDMTSRSEEVYSILQGVFGVTVIVTNIFVPYFVKKMTIRIYLVGAAFWGTGILYYGVLYDVEHFFIGAILVGIGLPVSSLVRVYLIQSLVSENKLGRAFSSNAVLLYLANTISLTIFGLLASIISIQWLMISSGALILLTGFCGLLIPIMKHSKSGWRFPINFFK
>NZ_CP022315.1|WP_089063504.1|339780_340239_-|helix-turn-helix-transcriptional-regulator
MLFNQDASEKSQQLFIENALTQLVILMLQYGPGSHLKELPTFQANDELHKVINALKDSYDDDWTLDEMAMQSGLSKYQFAHLFKQTTGLSPYSWLQIYRLIRSQELLTRTTSSILEIALQVGFKNVGAYNQLFKKVYGKTPTAFRMFHDGNK
>NZ_CP022315.1|WP_089060284.1|340622_341114_-|GNAT-family-N-acetyltransferase
MHLETRKITKDYAVEILHWKYEKPYDLYNNELNTESIDEMLNNTYFAIVDRDDDLIGYYCTGSATQVPAGNKIKAYDENYIDIGIGMKPNLTGKGFGSTFFSFILKDIQEAHLNTPMRLTVATFNKRAIRLYEKFGFVGQIKFNTDVTEFITMIRHETRNKDI
>NZ_CP022315.1|WP_089060285.1|341142_341388_-|hypothetical-protein
MAIKKYTRAGNIIFYIGLIVFIFGLSMNENIGWKKFYPEHYTSYSTPIMIVGVVIVIVTNFFRKKKLDESGKGETEKNDRR
>NZ_CP022315.1|WP_089060286.1|341657_342200_-|GNAT-family-N-acetyltransferase
MDFPTFETQRLKLVHIDHQYDQAYFDIMSEDKVTEYYGMDSLKKVNQASKIIDSFEDTYMKKHGIRWGIIWKETRTFIGTIGLNNLSTWSKRAEIGYELHPDHWRKGIATEAIRSVLGYSFREMGLFRMGAITFPDNVSSNNLLEKVGFKKEGILRGYLYQGDKSHDAYVFSMLRSEWLD
>NZ_CP022315.1|WP_089060287.1|342332_342737_-|VOC-family-protein
MKFNDFTAAQIRIARPTDKFDEVIDFYEKGLGLERMTDFTGHRGYTGVIYGLPGISYHLEFTKHVDGSPCSAPTHDNLLVLYIPDKQEIDAIYDRLKQMGYDAVEPENHYWKEKGITIEDPDGWRVVLMNTNGI
>NZ_CP022315.1|WP_089060288.1|342819_343422_-|diphthine--ammonia-ligase
MTKKEVVLSFSGGKDSCFTLYKLQQQNIKVSCLITTIWQQSQATVAHDEKRAKLEAQASSIGIPIHFMETDFATYTEDFVRNLKQLKRQYPINSIAFGDIYLDGHREWGEQVANKAGLEPLYPIWTEQEKVLDLLHEFVGAGFKAEVIKVDQTKLPESWVGRKLDQFFINDILQKDVCPMGESGEYHTAVYEGPIFKKGE

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Crispr_ID: NZ_CP022315_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022315_2

1400594-1400699

Orphan

Consensus_repeat	Method
TTTGGCTGATATATTTTGAGAAAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022315_2

>merge|NZ_CP022315|2|1400594-1400699|CRISPRCasFinder
TTTGGCTGATATATTTTGAGAAAGGCGGATAAACCCGGAATTTGGCCGATATATCTTGAGAAAGGCGGATAAAACCGGAATTTGGCTGATATATTCTGAGAAAGGC

>NZ_CP022315|2|2|1400594-1400699|CRISPRCasFinder
TTTGGCTGATATATTTTGAGAAAGGC	GGATAAACCCGGAATTTGGCCGATATATCTTGAGAAAGGCGGATAAAACCGGAA
TTTGGCTGATATATTCTGAGAAAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022315.1\|WP_089061225.1\|1402931_1403726_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224026
NZ_CP022315.1\|WP_089061213.1\|1392826_1393642_+\|phenylacetate-CoA-oxygenase-subunit-PaaC	unknown	unknown	gnl\|CDD\|131213
NZ_CP022315.1\|WP_089061219.1\|1397104_1398310_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181624
NZ_CP022315.1\|WP_089061216.1\|1394620_1395394_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|180295
NZ_CP022315.1\|WP_089061215.1\|1394322_1394628_+\|EthD-family-reductase	unknown	unknown	gnl\|CDD\|131173
NZ_CP022315.1\|WP_089061214.1\|1393654_1394161_+\|phenylacetate-CoA-oxygenase-subunit-PaaJ	unknown	unknown	gnl\|CDD\|131214
NZ_CP022315.1\|WP_089061221.1\|1399185_1400136_+\|DUF561-domain-containing-protein	unknown	unknown	gnl\|CDD\|132195
NZ_CP022315.1\|WP_089061227.1\|1405100_1406513_+\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_CP022315.1\|WP_089061229.1\|1407199_1407304_+\|putative-holin-like-toxin	unknown	unknown	unknown
NZ_CP022315.1\|WP_089061217.1\|1395397_1396180_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|236163
NZ_CP022315.1\|WP_089061231.1\|1409071_1409968_-\|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236582
NZ_CP022315.1\|WP_089061222.1\|1400154_1400553_+\|thioesterase	unknown	unknown	gnl\|CDD\|227783
NZ_CP022315.1\|WP_089061220.1\|1398322_1399099_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|181069
NZ_CP022315.1\|WP_089061218.1\|1396232_1397108_+\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236434
NZ_CP022315.1\|WP_089063563.1\|1410208_1411405_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP022315.1\|WP_089061224.1\|1401955_1402930_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
NZ_CP022315.1\|WP_089061228.1\|1406646_1407021_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|377953
NZ_CP022315.1\|WP_089061230.1\|1407458_1409012_-\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NZ_CP022315.1\|WP_089061226.1\|1403775_1404870_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP022315.1\|WP_089061223.1\|1400843_1401857_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380548

Protein	Function_ID	Function_description	E-value
NZ_CP022315.1\|WP_089061225.1\|1402931_1403726_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	2.01002e-125
NZ_CP022315.1\|WP_089061213.1\|1392826_1393642_+\|phenylacetate-CoA-oxygenase-subunit-PaaC	gnl\|CDD\|131213	TIGR02158, 12-phenylacetyl-CoA_epoxidase_subunit_C, phenylacetate-CoA oxygenase, PaaI subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	1.79102e-73
NZ_CP022315.1\|WP_089061219.1\|1397104_1398310_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181624	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.	0
NZ_CP022315.1\|WP_089061216.1\|1394620_1395394_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|180295	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional.	1.86561e-86
NZ_CP022315.1\|WP_089061215.1\|1394322_1394628_+\|EthD-family-reductase	gnl\|CDD\|131173	TIGR02118, TIGR02118, conserved hypothetical protein. This model represents a small family of proteins of unknown function, each about 105 amino acids in length. Conserved sites in the multiple alignment include a pair of aromatic residues, a histidine, and an aspartate. [Hypothetical proteins, Conserved].	1.05375e-37
NZ_CP022315.1\|WP_089061214.1\|1393654_1394161_+\|phenylacetate-CoA-oxygenase-subunit-PaaJ	gnl\|CDD\|131214	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	5.59404e-59
NZ_CP022315.1\|WP_089061221.1\|1399185_1400136_+\|DUF561-domain-containing-protein	gnl\|CDD\|132195	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.	1.56941e-104
NZ_CP022315.1\|WP_089061227.1\|1405100_1406513_+\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	1.51742e-152
NZ_CP022315.1\|WP_089061217.1\|1395397_1396180_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|236163	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.	3.95528e-80
NZ_CP022315.1\|WP_089061231.1\|1409071_1409968_-\|decarboxylating-6-phosphogluconate-dehydrogenase	gnl\|CDD\|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP022315.1\|WP_089061222.1\|1400154_1400553_+\|thioesterase	gnl\|CDD\|227783	COG5496, COG5496, Predicted thioesterase [General function prediction only].	8.28795e-21
NZ_CP022315.1\|WP_089061220.1\|1398322_1399099_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|181069	PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.	5.41742e-112
NZ_CP022315.1\|WP_089061218.1\|1396232_1397108_+\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236434	PRK09260, PRK09260, 3-hydroxyacyl-CoA dehydrogenase.	1.62531e-162
NZ_CP022315.1\|WP_089063563.1\|1410208_1411405_+\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.66595e-96
NZ_CP022315.1\|WP_089061224.1\|1401955_1402930_+\|ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.60215e-98
NZ_CP022315.1\|WP_089061228.1\|1406646_1407021_-\|PH-domain-containing-protein	gnl\|CDD\|377953	pfam08000, bPH_1, Bacterial PH domain. This family contains many bacterial hypothetical proteins. The structures of Structure 3hsa and Structure 3dcx show similarities to the PH or pleckstrin homology domain. First evidence of PH-like domains in bacteria suggests role in cell envelope stress response.	5.5228e-62
NZ_CP022315.1\|WP_089061230.1\|1407458_1409012_-\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NZ_CP022315.1\|WP_089061226.1\|1403775_1404870_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	4.45081e-64
NZ_CP022315.1\|WP_089061223.1\|1400843_1401857_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	1.34515e-101

>NZ_CP022315.1|WP_089061222.1|1400154_1400553_+|thioesterase
MKSGMDIGRTETIEIEVTEDMFASFEGSVVHPVYSTVAMVYHMEWVSRKIILPFLEDHEEGMGGAVQLKHISPSPLHSKVKLTATLVEYKNQQVRTKVEAYNEQGLIGKGEVKQVILPKEMINQKLSSGQTH
>NZ_CP022315.1|WP_089061221.1|1399185_1400136_+|DUF561-domain-containing-protein
MNPVCKLLKINYPIIQGGMGNISNAQLATAVSEAGGLGTIGCGTMSPDEVEKIIVDTKRNTDKPFAVNIAINVTPYLDELIQLVIKHKVPVITLSAGNPAPYIPLLHEHNKTVIAVIASVKHAEKAEQAGADMLVAEGFEAAGINSGLELTTFTLIPQIAKHVGIPVLAAGGIGDGNGLAAALMLGASGVQIGTRFIATKEAPFHNDYKKRLVEAEDTATVVIGRPVGRVRRILKNPYAAKLLSLEKEGLTLDQYGRLTSETQHVLGALKGDMENGFINSGQVAGLISHIPTVKELLDHMVKEAQEQLSKSADLLN
>NZ_CP022315.1|WP_089061220.1|1398322_1399099_+|enoyl-CoA-hydratase/isomerase-family-protein
MKTIFVKKDNGIAYVTINREEALNCLNYETLHQLQEEVSAIHLDQDVKVVIFTGYGEKAFCAGADLKERKYLSDTEVRRNVKAIRNLFTSIADLPQPTIAAVNGYALGGGFELMIACDFSIAVDGAKMGLTETSWAIIPGAGGTQRLPRLVGEMKAKELIFTAKKLTAEEAVQLGVVLKAVKKADLYPACEQLAQDIMRNGPVAVKQAKYAITQGMNTDLQTGMAIESKAYELTIPTEDRMEALQAFNEKRSPRFKGR
>NZ_CP022315.1|WP_089061219.1|1397104_1398310_+|acetyl-CoA-C-acyltransferase
MREVVIVDAVRTPIGRYKGALKDIRSDDLGAIVIKALLDRNPELPVDQLEEVILGNANQAGEDNRNVARMSALLAGLPVAIGGATINRLCGSGLDAVMSAARAIAVGEGDIYIAGGTESMTRAPLVMAKPEKGFPRGNMELFDTTIGWRFTNKKLDEMYGTDSMPQTAENVADRFGISREEQDKFAYDSQQRAKAAMEGGRLDPEIVPVIYQDRKGNEIVVSKDEHPRPETTLEKLGKLKPIFEGGTITAGNASGVNDGASALLVMSAEKAKELSLKPLVKYVVSATAGLEPAVMGLGPIYATQKALKRAKLTVNDIDLVELNEAFASQSLECMKQLELNPEKVNVNGGAIAFGHPLGASGARILTTLVHEMQKRRSKYGLATMCVGVGQGIATIVENVTE
>NZ_CP022315.1|WP_089061218.1|1396232_1397108_+|3-hydroxyacyl-CoA-dehydrogenase
MTIQNVTVMGAGVMGRGIAYVSALAGFHTTLVDISDKQLKDAYNHAEQTSQKGIKKGKLTEQEAQSLLHNLHTSLHFEAAMATSDLLIEAVPEMRDLKRQVMEKAEAHAPKHTIFASNTSTISPTELASYSKRPEQVAVMHFFNPVHLMPLVEIVRGLETSDQTVEFIRQAAEQMSKETVEVNEFPGFVTSRISALVGNEAFHMLQEGVATAEDIDKAIRLGLNYPMGPLELGDLVGLDARLNNLRYLHETLGEKYRPAPLLEQYVKAGRLGRKSGKGIYDYTDNDKLVKK
>NZ_CP022315.1|WP_089061217.1|1395397_1396180_+|enoyl-CoA-hydratase/isomerase-family-protein
MAKDYQTILFEKKNTVASIILNRPASYNAFTEEMNKDIIDALKLASKDEEVRSIVITGEGKAFCAGEDLAGVDEDTDHGTFLRTRYHPMMKAIKQTPKPIVAAVNGIAAGAGMSLALGADFRLVKPESKFVSAFMNIGLIPDSGFLYILPRLIGYAKALEVAVLGKPITGTEAYQIGLATELIENADWETGVDAFAQTLSSLPTKSFSLIKRNMMDGMHLPFDEMLEKEAQAQRIAGKTTDHQEGLQAFKEKRKPRFSGN
>NZ_CP022315.1|WP_089061216.1|1394620_1395394_+|enoyl-CoA-hydratase/isomerase-family-protein
MTNTHITSYIDGKVGIIQLNRPKVANALNRLMIDEIVKQMEVYDSDDAIRVIMVKGNEKAFAAGADIDEMMEDTPLSLELLDPFAVWDRMLLIKKPMIAAINGFALGGGFELALHCDLIVAGETAKFGFPEVQLGVMPGAGGTQYLTREMGRRKALEMVWLGEPVSASYLLQNGVINRVVAPELVEEESMKLANKLSKQAPISLRLIKEAVDAAGDLSLRDGLKLERKNFYLTFASGDQKEGMQAFAEKRRPSFKGV
>NZ_CP022315.1|WP_089061215.1|1394322_1394628_+|EthD-family-reductase
MVKLIALYKQPEDKEAFDEHYFQTHTPITKQIPGLREMKVTRIVGSPMGKSDYYLLCEMFYDDHDSLQKAMKTDEGKASGKDVMKFAGDIVTLMIGEELDD
>NZ_CP022315.1|WP_089061214.1|1393654_1394161_+|phenylacetate-CoA-oxygenase-subunit-PaaJ
MKDNQRQTEILAVLKTVDDPELPSVSVFDLGMVHDVVVLQSRVFISMVPTFAGCPALEIIEANVQKAVDAVDWVKECQVEFSFKHNWSTDSITAVGRENLKKHGISPPPKNYHPGEEWTVDCPYCGSDYTSMDNVFGPTACRSILYCGSCKNPFEAMKPVIKQSIIQN
>NZ_CP022315.1|WP_089061213.1|1392826_1393642_+|phenylacetate-CoA-oxygenase-subunit-PaaC
MTIRETAADAKQDPSYLKALTELLYQLADDDFITSFRGSEWLGLAPHIEEDVAYSSITQNTMGHAVLFYDLLEELGAGKADVLAHERPPKERRNGIYLEKKNGEGSYLEEPYYDWALTVVRNYLYETFKKTKLEAVATSSYQPLAMVAQKVLMEQTYHLAHWKMWLKQLQGSNDDARKRIQSRIKEAWNEFQDVLELGSESQSMEQFNLITGEQIVKERWLEDVTATLNNIPDAPLDKRYGSGRNGEHTADLEQALGILAEVYVSDKQAIW
>NZ_CP022315.1|WP_089061223.1|1400843_1401857_+|ABC-transporter-substrate-binding-protein
MKRGLQLIVIAIISILVLAACGSEDTSGTSKSKDSKDNGGKKTYHIGATQIVEHPSLDEAYRGFQAALKDAGLDVEYDLQSAQGDQNNVAPIANNFVADNVDLIFANSTPSALGAVQATSEIPIVFTSVTDAVAAGLVKSMDEPGQNVTGVLDLHPDAIKKTVEFIDENFDGATVGLIYNAGEQNSVTQIEAVKKAAEGTSLTLSERTVASSAEVQQAATTLVGEADVFYIVTDNTVVSALDSVIGVANEQDIPLIVGEPDSLKKGGFATFGIDYYTIGYRSGEMAAAILTGEKKISEIPVEYPKEIQLFINKQAAEKQGVEWNKEWDEKAKLVEQE
>NZ_CP022315.1|WP_089061224.1|1401955_1402930_+|ABC-transporter-permease
MLISLFGALESGVIYAIMALGVYLTFRVLDFPDLTVDGSFVTGAAVASISIMGGVSPILATILAAFAGFLAGCITGVLHTKGKINALLSGIIMMIALYSINLRIMGQPTLSLLRESTVFTQLQSLWEATGIDAALNGLLTLLGAEQLPGTWSIVILMVVVTFIIKLLTDYYLKTDVGLALRATGDNQKMIRSLSANTDSLIIVGVGISNALVAFSGALIAQHGGFADVGMGIGMIIIGLASVIIGEALFGTKTIARTTLAVVGGAIVYRIVVTMALRVEFLETGDMKLITALLVIAALVAPKILQARKEKKRRLQKRAKLKMEV
>NZ_CP022315.1|WP_089061225.1|1402931_1403726_+|ABC-transporter-ATP-binding-protein
MLKLEDIAITFNEGTPDEKQALQSINLELAKGDFVTVIGSNGAGKSTLMNAISGNISPDIGGVYINGRQVVHLPEYKRSAFIGRVFQDPMSGTSPSMSIEENLAMAYTRDKRRTLRPGVTTKRKKMFKEYLETLNLGLENRLNAKVGLLSGGERQALSLLMATFTEPKILLLDEHTAALDPSRAELITNLTHDVVEKFELTTLMVTHNMQQALDLGNRLIMMDKGQIILDVAEKEKQQLTIEKLLQEFRRIRGSQFEDDRAVLG
>NZ_CP022315.1|WP_089061226.1|1403775_1404870_-|N-acetylmuramoyl-L-alanine-amidase
MKETLRILLAGMSVLLLSFIISPSVDAHEGSTYGVGTSSLNVRSGPTDNAPIVGSLHPGDQVVVFEEHYGWAQTYYGGKEAWVASQFLYPLSSTEQIKQQVSVNKSITVNEAGVHVRSGPGTDYSIIGLATAGDTYEKIATKGDWHKILLDDGSTGWIAAWLTDGYTAENSTDESLKITPKSNTNGSLAGINIVLDPGHGGNDPGAIGFKGVVEKNLTLSTAEVVASSLRKAGATVKVTRQSDQYVSLEKRVLFSNKFQTDAFISLHYNAYPFIAVNGIGTYYYENGRGLASSIQSAIGKQVKLNDRGIHFGNYHVLRENSDLAVLIELGFITNPNDLFTIQTSEYQNNVAQAVTTGVKNYFLD
>NZ_CP022315.1|WP_089061227.1|1405100_1406513_+|amidase
MAEQYTAIDLVKRIKSKSISPVEVMNHYMNEIDKHNDQVNAFVTMNPHSMEEAKQAEQDVQQGKQLGPLHGVPVGIKDLTPTKGIKTSFGTKVFADHVPDRDATIVKRLKAAGAIIMGKTNTPDFGHKGTTDNLLFGATKNPWNLEKTAGGSSGGSAAAVAAGMVPFAEGSDGGGSIRIPASFCGVYGFKPSYGRIPMDNSLANAFGSNNPFVNHGSLSRTVRDAALFVDVTQGPSTTDPFSLPRFDEELLEQLEGSLQGVKIAYTKDFGMYTVDKEVLHIVDQQVERLRELGAEVEEISMDFDMTLHQFLGFFKNTWYASASAGGSAMLRDYPELLTPSYHTMIERGYDVSTSEYIGYQQKRTAVWRELQRHFERFDLIMSPSLSVPAFDYQLLGPEEIEGKKIEADSDWMMTHIYNMTGLPAASIPAGFTKSGLPIGMQLAGNRFNDGLVLRASLAYEKLIEGFPVIK
>NZ_CP022315.1|WP_089061228.1|1406646_1407021_-|PH-domain-containing-protein
MGIFDGMMGNASEISASDAEKEISELLTATEKVEHAYKLIRDLVIFTNKRLILIDKQGMTGKKIQYHSIPYKSITHYLIETAGTFDLEAELKIWISGSSTPIEKTFNKQLNIYHVQRVLSDYIG
>NZ_CP022315.1|WP_089061229.1|1407199_1407304_+|putative-holin-like-toxin
MSLYEIFMVLIGFGSLLIALIALVISLINRINRK
>NZ_CP022315.1|WP_089061230.1|1407458_1409012_-|gluconokinase
MAQSSYLGVDIGTTSTKTVLFNKQGKVITSHTINYPLYTPNPLVAEQNPDEIFDAVVDCMREVMKKNTADAHSLQFVSFSSAMHSVIAVDENNHALTNSITWADTRSAEHAQQIKEQHNGHEIYMRTGTPIHAMSPLAKLVWLRDTHPDTFAKAAKFISIKEYVFYKLFGEYVVDHSIASATGLMNLESLDWDKEAMQLAGITADQLSTLVPTTHQMTTLKDSYRSYVGFDSEVPFIVGASDGVLSNLGVNAIEPGVIAVTIGTSGAIRTVADQPRTDPKGRIFCYALTENHWIIGGPVNNGGIILRWLRDEFAAAEVETAKRLGIDSYDVLTKIASGVQAGSDGLIFHPYMTGERAPLWNENARGSFFGLSIHHKKEHMIRAVLEGIIYNLYTVLLALEELTGEPKQIQATGGFARSEMWRQLMANIFDKPVIVPESYESSCLGAIVLGMYAVGEIDDFRIVSDMIGQTHTHHPDETTTNVYRELLPVYIRLSRIFGEEYDSITAFQRKYVKETDD
>NZ_CP022315.1|WP_089061231.1|1409071_1409968_-|decarboxylating-6-phosphogluconate-dehydrogenase
MNIGIVGLGKMGLNLTLNLLDHGHRVVGFDSNAAVSDELTHEQFQFEASLLKLVDKLPEPRTIWLMVPAGDITEKVIDELTPLLSSGDALIDGGNSNYKDTLRRASALEEKGIYFFDCGTSGGTDGARNGACTMVGGDAEKFTEIEQVFNDVSIENGYLYTGKPGSGHFLKMVHNGIEYGMMQSIAEGFDILNKSDFDYDYEKVAKVWNHGSVIRSWLMELIENAFSKDAKLDDIRGVMNSSGEGKWTVETALDFQVAAPVIALSLMMRYRSQEDDTFTGKVVAALRNEFGGHDVVKK
>NZ_CP022315.1|WP_089063563.1|1410208_1411405_+|MFS-transporter
MGSTAAKTVTLPDKIWTRDFILVCVANFFIFLGFQMTLPTIPLFVRELGGSDQLIGLITGIFTFSALLLRPYAGHALESKGRRFVYMTGLAIFVLSVGSFAFIASIFILFMMRMVQGIGWGFSTTATGTIATDLIPPKRRGEGMGYFGLSGNLALAFGPSLGLTLVGIMSFKELFLICSALGLTALLLSSKIRYKKVEQSPNKTVTVKFDIFEKSAIQPSLLLFFITVTFGGIASFLPLYATDKGISGIESYFLVFAVFLMISRTFAGKIYDSKGHVYVFIPGTVLIFGAMCLLSWLPSTTVMLIAGGMYGLGFGSVQPALQAWAVDKASDNRKGMANATFFSFFDLGVGLGAMVFGQLAFMYDYSVIYSTAAGSVMLSLILYIYLLLKSRKSSGKIS

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Crispr_ID: NZ_CP022315_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022315_3

1762366-1762464

Orphan

Consensus_repeat	Method
GGGACATGGGGACAGGTCCCGTGTCCCGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022315_3

>merge|NZ_CP022315|3|1762366-1762464|CRISPRCasFinder
GGGACATGGGGACAGGTCCCGTGTCCCGGAAACCCGGGCGTGAAAGAGTGAAAGGGACATGGGGAGAAAGGGACATGGGGACAGGTCCCTTGTCCCGGA

>NZ_CP022315|3|3|1762366-1762464|CRISPRCasFinder
GGGACATGGGGACAGGTCCCGTGTCCCGGA	AACCCGGGCGTGAAAGAGTGAAAGGGACATGGGGAGAAA
GGGACATGGGGACAGGTCCCTTGTCCCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022315.1\|WP_172840477.1\|1747689_1750359_+\|discoidin-domain-containing-protein	unknown	unknown	gnl\|CDD\|227068
NZ_CP022315.1\|WP_089061500.1\|1769668_1770256_+\|DUF1062-domain-containing-protein	unknown	unknown	gnl\|CDD\|226782
NZ_CP022315.1\|WP_089063587.1\|1758363_1759041_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP022315.1\|WP_089061492.1\|1760302_1761469_+\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_CP022315.1\|WP_089061502.1\|1771475_1771904_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379209
NZ_CP022315.1\|WP_089061504.1\|1773907_1775302_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP022315.1\|WP_089063586.1\|1757939_1758197_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
NZ_CP022315.1\|WP_089061495.1\|1763938_1764664_+\|toxin-regulator	unknown	unknown	gnl\|CDD\|227278
NZ_CP022315.1\|WP_089061494.1\|1762693_1763686_+\|tagatose-1,6-diphosphate-aldolase	unknown	unknown	gnl\|CDD\|237236
NZ_CP022315.1\|WP_089061488.1\|1755115_1756345_+\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP022315.1\|WP_089061501.1\|1770562_1771435_+\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270704
NZ_CP022315.1\|WP_089061497.1\|1766610_1767222_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238872
NZ_CP022315.1\|WP_089061485.1\|1746222_1747626_+\|sulfatase	unknown	unknown	gnl\|CDD\|293755
NZ_CP022315.1\|WP_089061498.1\|1767710_1768457_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP022315.1\|WP_089061490.1\|1756728_1757730_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|273806
NZ_CP022315.1\|WP_089061486.1\|1750427_1753466_+\|DUF4981-domain-containing-protein	unknown	unknown	gnl\|CDD\|236673
NZ_CP022315.1\|WP_089061491.1\|1759140_1760316_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|131862
NZ_CP022315.1\|WP_089061487.1\|1753484_1755119_+\|DUF4091-domain-containing-protein	unknown	unknown	gnl\|CDD\|379121
NZ_CP022315.1\|WP_089061496.1\|1766034_1766577_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP022315.1\|WP_089061499.1\|1768639_1769275_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276

Protein	Function_ID	Function_description	E-value
NZ_CP022315.1\|WP_172840477.1\|1747689_1750359_+\|discoidin-domain-containing-protein	gnl\|CDD\|227068	COG4724, COG4724, Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism].	0
NZ_CP022315.1\|WP_089061500.1\|1769668_1770256_+\|DUF1062-domain-containing-protein	gnl\|CDD\|226782	COG4332, COG4332, Uncharacterized protein conserved in bacteria [Function unknown].	1.03472e-40
NZ_CP022315.1\|WP_089063587.1\|1758363_1759041_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	4.92705e-77
NZ_CP022315.1\|WP_089061492.1\|1760302_1761469_+\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	1.15739e-150
NZ_CP022315.1\|WP_089061502.1\|1771475_1771904_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379209	pfam13474, SnoaL_3, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.35379e-08
NZ_CP022315.1\|WP_089061504.1\|1773907_1775302_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.04303e-35
NZ_CP022315.1\|WP_089063586.1\|1757939_1758197_+\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	3.45168e-05
NZ_CP022315.1\|WP_089061495.1\|1763938_1764664_+\|toxin-regulator	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	1.1749e-06
NZ_CP022315.1\|WP_089061494.1\|1762693_1763686_+\|tagatose-1,6-diphosphate-aldolase	gnl\|CDD\|237236	PRK12858, PRK12858, tagatose 1,6-diphosphate aldolase; Reviewed.	9.5556e-132
NZ_CP022315.1\|WP_089061488.1\|1755115_1756345_+\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	8.93564e-53
NZ_CP022315.1\|WP_089061501.1\|1770562_1771435_+\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|270704	cd05155, APH_ChoK_like_1, Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase and Choline kinase. This subfamily is composed of uncharacterized bacterial proteins with similarity to APH and ChoK. Other APH/ChoK-like proteins include ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). These proteins catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	3.05972e-89
NZ_CP022315.1\|WP_089061497.1\|1766610_1767222_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238872	cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	4.10011e-58
NZ_CP022315.1\|WP_089061485.1\|1746222_1747626_+\|sulfatase	gnl\|CDD\|293755	cd16031, G6S_like, unchracterized sulfatase homologous to glucosamine (N-acetyl)-6-sulfatase(G6S, GNS). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficiency of N-acetylglucosamine-6-sulfatase results in the disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease.	0
NZ_CP022315.1\|WP_089061498.1\|1767710_1768457_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	8.40104e-112
NZ_CP022315.1\|WP_089061490.1\|1756728_1757730_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	1.0047e-09
NZ_CP022315.1\|WP_089061486.1\|1750427_1753466_+\|DUF4981-domain-containing-protein	gnl\|CDD\|236673	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed.	0
NZ_CP022315.1\|WP_089061491.1\|1759140_1760316_+\|SIS-domain-containing-protein	gnl\|CDD\|131862	TIGR02815, agaS_fam, putative sugar isomerase, AgaS family. Some members of this protein family are found in regions associated with N-acetyl-galactosamine and galactosamine untilization and are suggested to be isomerases.	1.92394e-144
NZ_CP022315.1\|WP_089061487.1\|1753484_1755119_+\|DUF4091-domain-containing-protein	gnl\|CDD\|379121	pfam13320, DUF4091, Domain of unknown function (DUF4091). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length. There is a single completely conserved residue G that may be functionally important.	7.08187e-27
NZ_CP022315.1\|WP_089061496.1\|1766034_1766577_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	4.27742e-32
NZ_CP022315.1\|WP_089061499.1\|1768639_1769275_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	7.76192e-19

>NZ_CP022315.1|WP_089061492.1|1760302_1761469_+|N-acetylglucosamine-6-phosphate-deacetylase
MTTNKYYLKADRFLLENGEKSDAFLAVENGRFGDFVEKVPENAAVVDWSGYTIAPGLVDTHIHGINGYDIMDGTVEAVRGVSAALPALGVTRFLPTTLTAYEADLQKAIQAVVAAVNEGLSGAQSEGIFLEGPYFTEKHKGAQNPGYFRDPDYEEFQLWQELSQHTIVKIALAPERDGASDFIRKVSSKGVLASIAHTDAGYDRCKDALDAGARNFVHLFNGMSGLHHREPGVAGAALISKDAFAELICDGHHVHRDIASMVVGIKGDKTVLITDCMRAGLLPDGNYHLGEFPVVLKDGVARTETGSLAGSTLRLIDGVKKLHAWSGRPLSEIWHLASLSPAKSLARDNELGSLQTGKLADFVVMDDELNIQATAIEGKIAYQAGVES
>NZ_CP022315.1|WP_089061491.1|1759140_1760316_+|SIS-domain-containing-protein
MLNLTNEILETRSAVHTAREIYQQPDVWQELFALLAEQEVALKDFIESIYKKHDQVRVIFTGAGTSAFAGDTVVPELRRQNSNAQVQFESIATTDIVSNPTTYLHQKVPTIMVSFARSGNSPESVAAVSLGEELIQQFYQVVITCNQEGQLAKNVKGDTNSMTVVMPEDVHDQGFAMTSSFTSMVIAAYALFAEESFTIGEAKQLIESAAALRDLTPDTVDDILNFDFERIVYLGSGLLGQLSHEASLKMLELSAGQVTAIHESSLGFRHGPKSILNDKSVTVLFMSQDPYTRKYDVDILRELAADDSGMKIVALTEKKDLEVEALADWMVTVNDGYDRFANDFQLAVVYIIFAQTLALKKSLQLGITPDNPSPDGRVNRVVQGVTIYDYE
>NZ_CP022315.1|WP_089063587.1|1758363_1759041_+|GntR-family-transcriptional-regulator
MEDLINKIKNQAYRENEKLPSERELCDLYDLSRITVRQALQELEREGYIYKLHGKGTFVAPESYNQHLVKLYSFTEEMKQIGKKPTTNVMSFKEMAVDERLADKMNLSPSEEVFQVVRLRLADDEPLMYETSYLPKKVFPHLTGHDLKHKPMYDVFYEGYHVNVTKAVERFSATMIRKEEAGHLQMLPEQPAMLIKRHAYHNEQVIEYTISVSRGDKFDYTVELT
>NZ_CP022315.1|WP_089063586.1|1757939_1758197_+|hypothetical-protein
MLAGRKSNPWTKVLAEFEEKGLERGLERGIEKGIEKGLEKGIAKGREEAAKDFAKELIRKDFQNEQIVELTKLDLVEVEELRESL
>NZ_CP022315.1|WP_089061490.1|1756728_1757730_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MEDNTVVLERPANYGTAPDYDGLWKALIEELFEEFMQFFAPDLYDEIDFSKGSEFLNKELLKEFINEKKGRVEADQIVKVCLKNGHERWILIHIEVQGKTGKGFAKRMFRYFYRIYDKHNQEVYAIALLTDTEQAIVPNHFHYSFFGTELDYRYNVYSFHNQSIKKLEASSNPFSDAVIAGIYAGKTRHDANRRYAFKRKLMIQILQSTPTQPEHTRTYLSALFHFIDNILQVSNELEEKLEEDIIPYIRKGAEQQMLAGRKSNPWTKVLAEFEEKGLERGLERGIEKGIAKGREEAAKDFAKELIRKDFQNEQIMELTKLDLVEVEKLRESL
>NZ_CP022315.1|WP_089061488.1|1755115_1756345_+|alpha-L-fucosidase
MSTGEIKPTAKQLEYQAWEFGLFIHFGLRTFYEGYVDFDKRPMYPARFNPSALDCEQWILTAKAAGMKYAVLTAKHHDGFSNWPSRFTDFSVANSAWKDGKGDVVQEFTAACHKHGIKPGLYYSPYDGSADFYHDKDGKAYDDYFINQITELLTNYGDVDILWFDGAGSENHEYDWQRIVDTVRSLQPNILLFNMADPDFRWIGNEDGIAPTPCWNEVDTDDLSDYHGNKGRLWLPAECDVQMRDNWFYSENDEHTVKSLEQLMGIYYYSIGHGANLLLNIGPNRQGLLPEKDRRRLVEFGDKVRERFASKVATIDQFEQRERTWMYQAKEPHMLNHVVIQEDLRNGENVESFKVAIISEKSRQKVTIYEGRSIGNKAIIQVPAIKVRGVEVEVTKSTREPRLKGISVY
>NZ_CP022315.1|WP_089061487.1|1753484_1755119_+|DUF4091-domain-containing-protein
MPEFETRCLSSLIKVFPDEELTARPFNQASALWNEAYSFQVAYRQKGNELEKVTVRAEGTIGDVVTMRTVGLVPSNFPCYKDHDEDVLRVTPGLYPDPLYRMKDRGLPVAPSNQWRSVWITVNLDEKIQAGSKQINVLFEKESGELLGEEVFDLEVIPASLPEQQLICTQWFHADCLATHYNVDIFSEEHWERIDQYMQTAAEHGSNMLLTPLFTPPLDTDIGGVRPTVQLVEVEKTGETYQFNFAKLTRWIELCLKHGIRYVEFSHLFTQWGAEHAPKIVAKVNGETNRIFGWETDASGHEYKEFLSQFLPELITYIKEQGLEDRVYFHVSDEPSQDNLESYQQASDLIHDYLSDFPVIDALSDYAFYDRGLVKNPIPANDHLVPFLENNVPNLWTYYCCVQYKKVSNRFFAFPSARNRISGMQFYHYNIAGFLHWGYNFWYSRLSRKQIDPFQNTDADGGFPSGDAFLVYPGENGPIESIRMEVFYEALQDLRALQLLEKLIRRAEVLNLLGPITFEDYPRGSEWLLTKREKVNQKILEAIE
>NZ_CP022315.1|WP_089061486.1|1750427_1753466_+|DUF4981-domain-containing-protein
MKPQDWQAMNVLHRDREKSRSYFIPFSHENRALTYDRGNSDRFKLLNGVWKFHYAETPQEAPAEFYKDEFDVSGWDDMEVPDHWQLQGYDKPHYTNVNYPFPVDPPHVPTENPTASYQRDFHISDGWMKKLVYLRFEGVDNCFHVWVNGHEVGFSKGSRMAAEFNISSYLCSGKNTLAVRVYKWSDSSYLEDQDMWWLSGIFRDVYLLSRPKAHIRDVFVRTDLDEDYQDATLNVDIDIENAVEGLKVEYQLLDAWREPVNDRFLDERFQIQIPVKNPQKWSAENPYLYQLVISLKDQHDRVLETIAQKVGFRSVELKDGVVLINGVAIKFKGVNRHDSHPDYGRAIPLSHMKKDIELMKQGNINAVRSAHYPNDPRFYDLCDEYGLYVIDEADLETHGFETVGNINRLSDDPAWEAAYLDRMERMVERDKNHPSIVMWSLGNESGNGVNHAAMAKWARAKDPTRLIHHEGDSRELFWGGKRQVDPTVSDVHTTMYTSIAELEEVGQYTELTKAHLLCEYAHAMGNGPGALKEYWDTFYKYKRLQGGFVWEWADHGIRQHSADGQEYFAYGGDFGDQPNDYNFVIDGLVMPDRTPSPGYFEHKKVIEPVKVDAVDLDAGTVEVTNRYDFISLDHLTLSWNIEADGKVMQSDGLSLEGIEAGQTKSFTVPFDLPKPLKGGTDYWLNLQFTLAAATSWAPVGHEVAWAQFMLAQGAEPSYEAGDMDSVTVEEAGSFLYVQGANFDLSFNKVLGNIHSWKCDGLELLQTGPTLQFWRAMIDNDHRSEKEWKNHGIHWLQQRTDQVTWKLAKDNTSISIKVVQRIAPPMLAWGIDSEITYTIDGNGDVLVDVSGKPTGNAPRTLPRIGMEMTVPNTLDQVSWYGRGPGESYADSKQANRFGIYKKSVDELLTNYVYPQENGNRTDVNWVTFANGHGMGVIISGSNTFNFSAHHYSVADFDQAKHTHELVKKDEIYVHLDDQQHGLGTASCGPDVLPDYELITGDFSFKFRLTPFSV
>NZ_CP022315.1|WP_172840477.1|1747689_1750359_+|discoidin-domain-containing-protein
MNKVKAMYGFVFSVMLTVVIFAVPMSTFAEQPESSYWYPEGLMNWSPESDADAIFNKSSVPLAEREVLYDVNDTAQSEAKLVALSALNPNTSGVPSQGGNKFFANTFSYWQYADLMVYWAGSAGEGIIVPPSADVIDAAHKNGVPILGNVFFPPKVYGGKEEWLEQMLVQRDDGSFPMADKLLEVASYYGFDGWFINQETGGGTVETAEKMKDFLAYLQEHKQEGMQIMWYDAMTKNGDINWQNALTDQNKMFLQDGEQRVSDSMFLNFWWNSQEASYNKAKEIGRNPYDLYAGIDVEANGTDTNVNWEGIFPEGRAPYISLGVYRPDWAFKTSTTMNEFYHKEQEFWTGAAGDPSETSKKDSWKGMAHYFTAKTSVQELPFVTHFNTGSGKSFAVNGVTKSEQDWNNRSLQNILPTWRWLTESDGQPLHVNFDWNQAYYGGSSLKISGKLSSENATHVKLYKTDLPIEKDTEISVTYRTDVKKPNMRLGVSFIGEPGQYVFFDVKKKGRNQWTTETVKLKKYQDKKIAAISLYFDSEEVIEDYQMNIGEIKVTSKHSDKKVPDAPTNPTWLETAYEGGLYADLSVKWDPVDDTNIQHYELYRKHANGEREFIGATPNNAYHIEDLRRDGKETSTTLEIVAVSKDYVKSEAVEVTFEWPPYPIPEADFSASQTVAAPGDEIQFFNHSSEATEKVEWHFSGATPATSTESNPIVTYQEEGVYAVTLVAKNSEGEDSLTKEGFITISEDATNIENVALDKTASASGQCGTSEGPLNAIDGETANNSKWCAIGENQWLTVDLGEVYHLSEFVLKHAEAGGESPAFNTKAFKIETSLDGENWENAVTVTANTAAVSEHPIPITEARYIRLSIQQPTQGGDQAARIYELEAYGY
>NZ_CP022315.1|WP_089061485.1|1746222_1747626_+|sulfatase
MANKTKPNILFIMSDDHAAHAMSCYDSKINQTPNLDRIADEGMRFDNCFCTNSICAPSRAAILTGQYNHVNGVKTLGDGIDGRKPNVQKVLKDNDYQTAIVGKWHLGHGGEHDPTGFDYWNVLPDQGDYHDPKMIEMGKEKQYKGYVTDLITDISLDWLQNRSADQPFMLMCHHKAPHRPWEPDDKHAQLYEDIEIPEPETFHDDYANRSNAAKEATMRVDRDLFKTDLKMDPPENLSPAELKSWKYQRYIKDYLRVVASIDDNVGRLLDYLEEEGLAENTIVMYTSDQGFFLGDHGWYDKRFMYEESLRMPYIVRYPRAVEPGSVTDNMALNVDFAETFLDYAGIDIPDDMQGTSLRPVLEGRTPDDWQTSVYYRYWEHLSDPHKVGAHYGVRTERYKLIYYYGQALGASNTLDETRTPEWELFDLQEDPYELNNVYDDPNYADTVTILKEELHRLKEKVGDEACD
>NZ_CP022315.1|WP_089061494.1|1762693_1763686_+|tagatose-1,6-diphosphate-aldolase
MKLSPGKQRGLEAISDENHIIFATAMDQRGSLGKMIQSLNDTITYEDGLSKFKVGVSEVLGNQSSSLLLDPEYGWDAAGKLNKEIGLIMAYEKTGYDATEQGRLPNLVDDYAVQDLVKAGASAVKLLVYYDHKEDEKYNKIKNALIKRVGDECRQNDLLFILEPVSYSADGLSAKGADFAKTKPEIIEFFMEEFSKEEYGVDLLKVEVPVSIFHIEGYDQYDNYEPVYSQEEAARYYRRCSQKSGVPFIYLSGGVTNKQFVDTLHFAKNAESQFSGVLCGRATWKDGVKEFAQEGKDAYYQWLETKGTDNLNKVKAAVEETAVPWSEFDN
>NZ_CP022315.1|WP_089061495.1|1763938_1764664_+|toxin-regulator
MVKKKGKKFWISSVLGVIIFIFLIVSVSNSAAATKRADKEVSDLESNLDEKNSRIAELEDDLEEKDSTIAELNKKVEEAEPWFKLSKKEQERKIAEEKKKEEAEKAAAAKKAAEEEKARLAAEEAERKKQEEKEKQGYETGITFEQLARTPDDYEGEKVTFSGKVVQVIEGEDTTVQLRIAVNDDYDKVIFAEYDSSIVDSRVLEDDQITIMGISSGLLSYESTMGGTITIPSIIVDKIEQ
>NZ_CP022315.1|WP_089061496.1|1766034_1766577_+|GNAT-family-N-acetyltransferase
MKIEGNRIFLQSLDSSFGEAILALEIRNQEFFKQFTIERDADFYTLESQLKRLRKKEKEREDDKGYLFGIFQQESQELIGEIDLFKIERGPAQCAMVGYSLDKSLNGNGYMTEAIKLVVNHAFHDLELHRLEAGVMPHNLGSIRALEKSGFHKEGIAEKNVKINGRWEDHQMLAIVNPED
>NZ_CP022315.1|WP_089061497.1|1766610_1767222_+|SGNH/GDSL-hydrolase-family-protein
MRMVFIGDSITESGRFAELENLGTGYVRLIHDYLITTYPESPLEIINKGISGNRITDLAARWQTDAIDLQPDIISISIGINDVWRQLDQPDIEQIFPDEFEKIYEDLLMKIKNQTSATIVLMEPTVIEENAESLGNEKLKPYVECVNRLAEKYQATTVPAHQSFKKYLMEGTGYKLTTDGVHMNSAGNMLMATSWLQATKSLL
>NZ_CP022315.1|WP_089061498.1|1767710_1768457_+|type-I-methionyl-aminopeptidase
MTIGNQNDIDGLMKIGKIVALTIGEMKRQIRVGMTTKELDNIGGRFLKRHGAVSAPKLTYNFPGYTCISVNNEVAHGIPGNRKIKQGDLVNIDVSAELGGYFADAGESFQIPLYNSSLTHLCQYTHNTMMKVISSLKPGVRLNEIGRIIQQEAKKGGYKVIMNLCSHGIGKSLHETPEEILPYYDRNDKRVLKEGLVITIEPFLSTEADYVVGSPDGWTLCVPDNSFCAQHEHTVIITRDQPIITTIA
>NZ_CP022315.1|WP_089061499.1|1768639_1769275_+|pentapeptide-repeat-containing-protein
MKIDTPIIPEDLTEKKFTDIFYEEDPEFEMCLVTDSQFENESIERLRLYQTVIKNCNFVNTDFSRIDLTDVRFENCDLSNANLGNASMNRVEFLNCKLLGSNLTESYIGNTKFGESILNMGMFGNSKLEKVIFDHSVLESADLFDCKLKKVEFLLCNLNGVSFEDTSLKGIDISSSNFDSLVVSIENLRGCKVSTSQAVQFASLLGLKIQR
>NZ_CP022315.1|WP_089061500.1|1769668_1770256_+|DUF1062-domain-containing-protein
MSLNNLFTCEIIAQETPYIKRNCSKCKMNTEFYCSEKFRVNANQKIIDSWLIYNCIHCEGTWNYPILSRVNINKIDPMLIQKFMNNDKETIWKYAFQINKLRKRCNDVNTDIRYELRKEKLDLLANEVTIRLCYKYDFGLRTDKLIAEIFGISRSNVNKLAQKGTILLNPNIKMKSKVIDDLQITVTGDWYKADA
>NZ_CP022315.1|WP_089061501.1|1770562_1771435_+|aminoglycoside-phosphotransferase-family-protein
MSEKMHVDELEIDEQLVRSLLVDQFPHWAKLPLRRVEPIGTVNAIFRLGDEYSVRLARRGGPITPGSREFTWLPRLASSVSLDIPMPIAQGHPNNEYPWFWEVHTWVEGDTMPIEGIDEIQAACDLAAFIAALQQVNSSGGPLGRGIPLAQRDKDFRYWLARFDGDPAVSVVWESALAAPPWNGPPVWHHGDLDVRNWLVRNKRISGVIDWGEMGIGDPACDVMVAWKLHSPAARDAFREAFPVDDATWARARGWVVSQAVAILAYYTPQNNPILYHEAKSWLDLVLEDL
>NZ_CP022315.1|WP_089061502.1|1771475_1771904_+|nuclear-transport-factor-2-family-protein
MGIGFNNVQEVLENYKSAVYEKDVERFLSSCASDIHVYDCWQDWEYIGISQRKEMAEEWFNGLNEEGVLLKTDFDNLVIEENANLAFVHCNVTYAAHNESGEKLRQMRNRFTFGLKKENDSWNIIHEHSSLPINMETGKGIF
>NZ_CP022315.1|WP_089061504.1|1773907_1775302_-|FAD-binding-oxidoreductase
MREVGSIVTELTGRIIRRGDPGYPEARKNFNLYYSKFPEAIVFCEEEKDVLNALKYVRESKVPFRVRSGRHSYQNFSLLDNGIVIDISELNAIKVDTSKDIAVIKAGCELGNVYQTLWQHGRTLPSGIHSSAGSTIPAGTQSSVGIAGLTLGGGIGYLSRVFGLTCDNLLNVRIAVPKGKDDVKVLEANSRKNSELFWACCGGGGGNFGIVTEFTFRIHPIKNVSIFQAEWDFDQLETAFDSWQHWAPFADRRLTSSIELKAKSENTIQALGQFLGSKDELKKLIRPLVKNTSPRKVQVTTIPFNQAVNFFNNPAGNIPSYFKRSGAYIYKPLPNEGIKIMKRFLENAPNENAAIWQQSLAGAVQDKAPSETAYYHRNALIAQEYNTRWTKDEVASRNVQWVYSLRKHLTPYTRGNYVNWPDILIRDWPRTYYGDNFDQLRKVKTKVDPMNVFRFKQSIPPFSN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

541732 : 550130

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089060453.1\|541732_542305_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.3e-30	39.1
WP_089060454.1\|542297_543320_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	4.4e-70	45.9
WP_089060455.1\|543582_544992_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.3e-51	32.0
WP_089060456.1\|544967_547196_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.0e-148	40.9
WP_089060457.1\|547179_547863_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_089060458.1\|547859_548111_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_089060459.1\|548107_548821_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FUQ7	Synechococcus_phage	9.7e-40	39.8
WP_089060460.1\|548834_550130_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.5e-17	24.5

DBSCAN-SWA_2

779522 : 788213

Staphylococcus_phage(28.57%)

integrase

attL 777663:777676|attR 790914:790927

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
777663:777676	attL	NA	NA	NA	NA
WP_172840452.1\|779522_780863_-	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	5.3e-148	63.6
WP_089060658.1\|780831_781179_-	winged helix-turn-helix transcriptional regulator	A0A218MNF3	uncultured_virus	4.3e-09	42.2
WP_089060659.1\|781460_781688_-	hypothetical protein	NA	NA	NA	NA
WP_089060660.1\|781684_782167_-	hypothetical protein	NA	NA	NA	NA
WP_089060661.1\|782258_782507_-	hypothetical protein	NA	NA	NA	NA
WP_089060662.1\|782684_782867_-	hypothetical protein	NA	NA	NA	NA
WP_089060663.1\|782867_783647_-	ATP-binding protein	A0A2I6PDV5	Staphylococcus_phage	1.6e-43	45.1
WP_089060664.1\|783660_784482_-	phage replisome organizer N-terminal domain-containing protein	A8ASN4	Listeria_phage	4.8e-43	37.3
WP_157724792.1\|784542_785058_-	helix-turn-helix domain-containing protein	A0A290FZK9	Caldibacillus_phage	5.6e-21	36.0
WP_089060666.1\|785124_785448_-	DNA-binding protein	NA	NA	NA	NA
WP_089060667.1\|785496_785685_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_089060668.1\|785833_786232_+	helix-turn-helix transcriptional regulator	A0A1L2JY18	Aeribacillus_phage	1.1e-08	37.4
WP_089060669.1\|786392_786845_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_172840453.1\|787007_788213_+\|integrase	site-specific integrase	A0A0N9SGH8	Paenibacillus_phage	2.3e-73	42.0
790914:790927	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1179312 : 1236924

Bacillus_virus(16.67%)

tRNA,transposase,protease,integrase

attL 1193927:1193947|attR 1240834:1240854

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157724800.1\|1179312_1179531_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_089060818.1\|1179693_1181448_+\|transposase	transposase	NA	NA	NA	NA
WP_089061009.1\|1181573_1182221_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_089061010.1\|1182416_1183691_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.6e-93	43.8
WP_089061011.1\|1184203_1184794_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA
WP_089061012.1\|1184809_1185694_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA
WP_089061013.1\|1185742_1187083_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.9e-31	31.5
WP_089061014.1\|1187277_1188747_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.4
WP_172840460.1\|1188884_1190102_-	carboxylate--amine ligase	NA	NA	NA	NA
WP_089061016.1\|1190310_1191264_+	YaaC family protein	NA	NA	NA	NA
WP_089061017.1\|1191312_1193844_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	9.8e-111	35.5
1193927:1193947	attL	NA	NA	NA	NA
WP_089061018.1\|1194068_1195991_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.1e-151	47.0
WP_089061019.1\|1196043_1196322_-	DUF370 domain-containing protein	NA	NA	NA	NA
WP_089061020.1\|1196337_1197450_-	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_089061021.1\|1197490_1197718_-	S4 domain-containing protein YaaA	NA	NA	NA	NA
WP_089061022.1\|1197975_1199112_-	DNA polymerase III subunit beta	NA	NA	NA	NA
WP_089061023.1\|1199298_1200648_-	chromosomal replication initiator protein DnaA	A0A0K2CNV5	Brevibacillus_phage	8.6e-05	39.7
WP_089061024.1\|1201275_1201410_+	50S ribosomal protein L34	NA	NA	NA	NA
WP_089061025.1\|1201669_1202011_+	ribonuclease P protein component	NA	NA	NA	NA
WP_089061026.1\|1202102_1202879_+\|integrase	YidC family membrane integrase SpoIIIJ	NA	NA	NA	NA
WP_089061027.1\|1202875_1203490_+	protein jag	NA	NA	NA	NA
WP_089061028.1\|1203651_1204626_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_089061029.1\|1204818_1206195_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_089061030.1\|1206437_1208324_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_089061031.1\|1208344_1209061_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_089061032.1\|1209330_1210191_+	nucleoid occlusion protein	S5VSZ7	Leptospira_phage	2.0e-15	36.6
WP_089061033.1\|1210379_1211153_+	ParA family protein	Q8JL10	Natrialba_phage	4.9e-21	27.7
WP_089061034.1\|1211133_1211967_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	3.2e-18	34.7
WP_089061035.1\|1212179_1213346_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_089061036.1\|1213379_1214084_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_089061037.1\|1214120_1214753_-\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	5.1e-16	31.8
WP_089061038.1\|1214852_1215881_+	hypothetical protein	NA	NA	NA	NA
WP_089061039.1\|1215956_1216895_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_089061040.1\|1216912_1217110_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_089061041.1\|1217348_1218446_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_089061042.1\|1218575_1218866_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_089061043.1\|1218881_1219376_+	single-stranded DNA-binding protein	D7RWG9	Brochothrix_phage	5.7e-47	75.0
WP_089061044.1\|1219396_1219627_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_089061045.1\|1219708_1220140_+	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_089061046.1\|1220476_1221109_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.2e-25	35.3
WP_089061047.1\|1221123_1221801_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_089061048.1\|1221826_1222597_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_089061049.1\|1222607_1223096_-	hypothetical protein	NA	NA	NA	NA
WP_089061050.1\|1223586_1224528_+	YybS family protein	NA	NA	NA	NA
WP_089061051.1\|1224564_1226538_+	DHH family phosphoesterase	NA	NA	NA	NA
WP_089061052.1\|1226534_1226981_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_089061053.1\|1227062_1228436_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.7e-121	50.7
WP_089061054.1\|1228664_1229954_+	adenylosuccinate synthase	A0A2P1EKE7	Megavirus	1.1e-68	36.8
WP_089061055.1\|1230090_1230795_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.6e-45	44.0
WP_089061056.1\|1230801_1232634_+	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.8e-37	35.3
WP_089061057.1\|1232630_1233950_+	hypothetical protein	NA	NA	NA	NA
WP_089061058.1\|1233930_1234881_+	two-component system regulatory protein YycI	NA	NA	NA	NA
WP_089061059.1\|1234877_1235675_+	MBL fold metallo-hydrolase	U5PWH0	Bacillus_phage	3.5e-14	24.9
WP_089061060.1\|1235715_1236924_+\|protease	serine protease	W5SAB9	Pithovirus	4.2e-11	28.3
1240834:1240854	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2901338 : 2911203

Helicobacter_phage(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089062425.1\|2901338_2903153_+	DNA primase	A0A1S5RFR1	Helicobacter_phage	1.7e-43	30.3
WP_089062426.1\|2903183_2904305_+	RNA polymerase sigma factor RpoD	M4SMP8	Cyanophage	1.7e-38	36.5
WP_089062427.1\|2904580_2904955_+	c-type cytochrome	NA	NA	NA	NA
WP_089062428.1\|2905041_2905761_+\|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	NA	NA	NA	NA
WP_089062429.1\|2905735_2906848_+	Nif3-like dinuclear metal center hexameric protein	H2ECW0	Moumouvirus	1.3e-19	43.9
WP_089062430.1\|2907004_2908321_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.2e-47	30.2
WP_089062431.1\|2908340_2909234_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	1.5e-29	33.8
WP_089062432.1\|2909511_2911203_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.2e-136	50.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022315

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection