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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022360 Shewanella bicestrii strain JAB-1 plasmid pSHE-2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP022358 Shewanella bicestrii strain JAB-1 chromosome, complete genome 1 crisprs cas3,csa3,cas4,WYL,DinG,DEDDh,csx1,RT 0 0 6 0
NZ_CP022359 Shewanella bicestrii strain JAB-1 plasmid pSHE-CTX-M, complete sequence 0 crisprs DEDDh 0 0 2 0

Results visualization

1. NZ_CP022358
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022358_1 3225938-3226023 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2145344 : 2155553 13 Faustovirus(12.5%) NA NA
DBSCAN-SWA_2 2375826 : 2387126 12 uncultured_Caudovirales_phage(28.57%) tRNA NA
DBSCAN-SWA_3 2432659 : 2504446 56 Bacillus_virus(18.75%) tRNA,protease,integrase,transposase attL 2433064:2433079|attR 2445557:2445572
DBSCAN-SWA_4 3438450 : 3453555 13 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_5 3475301 : 3482757 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 4001941 : 4070176 53 Klosneuvirus(25.0%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP022359
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 37256 : 51279 12 Escherichia_phage(42.86%) transposase NA
DBSCAN-SWA_2 78217 : 123662 48 Salmonella_phage(33.33%) integrase,transposase attL 121394:121409|attR 126314:126329
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage