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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015277 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP015273 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP015275 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 3, complete sequence 0 crisprs csa3,RT 0 0 0 0
NZ_CP015272 Mycobacterium chimaera strain ZUERICH-1 chromosome, complete genome 5 crisprs DEDDh,cas3,csa3,RT,DinG,cas4,WYL,c2c9_V-U4 0 0 8 0
NZ_CP015274 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP015276 Mycobacterium chimaera strain ZUERICH-1 plasmid unnamed 4, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP015272
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015272_1 513575-513663 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015272_2 1804271-1804349 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015272_3 2782633-2782746 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015272_4 4407586-4407682 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015272_5 4945632-4945765 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 272945 : 342555 55 Rhodococcus_phage(20.0%) transposase,integrase attL 329332:329391|attR 350920:352439
DBSCAN-SWA_2 908623 : 974066 45 Staphylococcus_phage(37.5%) integrase,transposase attL 889019:889038|attR 973862:973881
DBSCAN-SWA_3 979032 : 1042257 45 Burkholderia_virus(20.0%) integrase,transposase attL 978016:978048|attR 1039250:1039282
DBSCAN-SWA_4 1066198 : 1139523 47 Staphylococcus_phage(50.0%) integrase,transposase attL 1085728:1085744|attR 1131330:1131346
DBSCAN-SWA_5 2152287 : 2206811 28 Tupanvirus(57.14%) integrase,transposase attL 2153008:2153067|attR 2213227:2214580
DBSCAN-SWA_6 3948959 : 3958049 8 Shahe_endorna-like_virus(50.0%) NA NA
DBSCAN-SWA_7 4672075 : 4678651 7 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_8 5236399 : 5245045 8 Burkholderia_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage