CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022392	Streptococcus iniae strain QMA0248 chromosome, complete genome	2 crisprs	DEDDh,cas3,cas9,cas1,cas2,csn2,csm6,DinG,csa3	0	9	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022392_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022392_1

799687-800646

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	PILER-CR
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CRT

14 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP022392_1

>merge|NZ_CP022392|1|799687-800646|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACAAGCGGAACAGATGACAATATATGATTTTTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACGCTGAAAAGACTGCTGTACTCGTTGGAATAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTCCTTTTTGAGTAAAAGCTATTGTCTCATTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTATACGACTATAAACAGTTGCCAGCTTCATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTATGGAAAATGTTGACTTCCACGGTAAATCGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTAGATCCCCGCATTTTTGACGAAAAAGCTCGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCGAAAGGTACTATAACCGATGAAGATATTAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACACAATTATTTTATGTCAGATATTGATGAATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACGTGTTCGCCGAATAAGTAGAATTAAGAAGCGTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAACCCTGCAAAAGATTCATATGCGATTAGTTATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCAAGTCTTGCAACAACAAGTATCCACTACAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCGGTTTAGCTGCTCTTGAGAAGATTGTATTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTAGTATTAAATATAATATCAACACCTTTAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTACAACAGTACCTATAAGTGTGGCTACACCGTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>NZ_CP022392|1|1|799687-800580|PILER-CR
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AAGCGGAACAGATGACAATATATGATTTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GCTGAAAAGACTGCTGTACTCGTTGGAATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TCCTTTTTGAGTAAAAGCTATTGTCTCATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TATACGACTATAAACAGTTGCCAGCTTCAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TATGGAAAATGTTGACTTCCACGGTAAATC
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TAGATCCCCGCATTTTTGACGAAAAAGCTC
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGAAAGGTACTATAACCGATGAAGATATTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ACAATTATTTTATGTCAGATATTGATGAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC

>NZ_CP022392|1|1|799687-800646|CRISPRCasFinder
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AAGCGGAACAGATGACAATATATGATTTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GCTGAAAAGACTGCTGTACTCGTTGGAATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TCCTTTTTGAGTAAAAGCTATTGTCTCATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TATACGACTATAAACAGTTGCCAGCTTCAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TATGGAAAATGTTGACTTCCACGGTAAATC
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TAGATCCCCGCATTTTTGACGAAAAAGCTC
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGAAAGGTACTATAACCGATGAAGATATTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ACAATTATTTTATGTCAGATATTGATGAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TACAACAGTACCTATAAGTGTGGCTACACC
GTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>NZ_CP022392|1|1|799687-800646|CRT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AAGCGGAACAGATGACAATATATGATTTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GCTGAAAAGACTGCTGTACTCGTTGGAATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TCCTTTTTGAGTAAAAGCTATTGTCTCATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TATACGACTATAAACAGTTGCCAGCTTCAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TATGGAAAATGTTGACTTCCACGGTAAATC
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TAGATCCCCGCATTTTTGACGAAAAAGCTC
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGAAAGGTACTATAACCGATGAAGATATTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ACAATTATTTTATGTCAGATATTGATGAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TACAACAGTACCTATAAGTGTGGCTACACC
GTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022392.1\|WP_003099258.1\|789134_789791_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022392.1\|WP_003099264.1\|792489_793131_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_CP022392.1\|WP_003099267.1\|793184_793400_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022392.1\|WP_003099287.1\|804909_805374_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP022392.1\|WP_003099283.1\|804233_804890_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP022392.1\|WP_003099262.1\|791725_792493_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_CP022392.1\|WP_003099277.1\|801213_801465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022392.1\|WP_003099280.1\|801844_803677_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP022392.1\|WP_003099260.1\|790981_791716_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_CP022392.1\|WP_003099273.1\|798918_799581_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_CP022392.1\|WP_003099269.1\|793615_797722_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP022392.1\|WP_003099276.1\|800742_801165_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP022392.1\|WP_003099292.1\|806820_807666_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381297
NZ_CP022392.1\|WP_003099289.1\|805613_806738_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_CP022392.1\|WP_031239422.1\|803787_804231_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP022392.1\|WP_003099272.1\|798599_798929_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP022392.1\|WP_089180074.1\|797721_798588_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP022392.1\|WP_003099297.1\|808977_809595_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022392.1\|WP_003099259.1\|789833_790964_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP022392.1\|WP_003099294.1\|807774_808794_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411

Protein	Function_ID	Function_description	E-value
NZ_CP022392.1\|WP_003099258.1\|789134_789791_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.21858e-10
NZ_CP022392.1\|WP_003099264.1\|792489_793131_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	5.18321e-54
NZ_CP022392.1\|WP_003099292.1\|806820_807666_+\|aldo/keto-reductase	gnl\|CDD\|381297	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. The family includes AKR1A/B/C/D/E/G/I, AKR2A/B/C/D/E, AKR3A/B/C/D/E/G, AKR4A/B/C, AKR5A/B/C/D/E/F/G/H, and similar proteins.	1.60721e-102
NZ_CP022392.1\|WP_003099287.1\|804909_805374_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.56994e-17
NZ_CP022392.1\|WP_003099283.1\|804233_804890_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	1.07784e-28
NZ_CP022392.1\|WP_003099262.1\|791725_792493_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.46549e-126
NZ_CP022392.1\|WP_003099280.1\|801844_803677_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP022392.1\|WP_003099260.1\|790981_791716_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	4.71812e-76
NZ_CP022392.1\|WP_003099273.1\|798918_799581_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	9.43095e-113
NZ_CP022392.1\|WP_003099269.1\|793615_797722_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP022392.1\|WP_003099276.1\|800742_801165_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.77313e-69
NZ_CP022392.1\|WP_003099289.1\|805613_806738_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.66775e-79
NZ_CP022392.1\|WP_031239422.1\|803787_804231_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.68939e-84
NZ_CP022392.1\|WP_003099272.1\|798599_798929_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.99497e-47
NZ_CP022392.1\|WP_089180074.1\|797721_798588_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.79907e-123
NZ_CP022392.1\|WP_003099259.1\|789833_790964_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP022392.1\|WP_003099294.1\|807774_808794_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.79923e-94

>NZ_CP022392.1|WP_003099273.1|798918_799581_+|type-II-A-CRISPR-associated-protein-Csn2
MKLNFPVFDEPITIEKGTILVIENRTVFSSCAKHFCQYSEEDDLKLFDEKFKSIKESEVMLVTDILGYDVNAPSLLKLVHSDLETQLSDKPEVKSMIEKLAATITELIAYECLENELDLEYDEITVLELIKALGVKIETQSDTFFEKCLEIVQIFKYLTKKKLLVFINSGAYFTRDEFEKLLEYISLSSQPVLFLEPRKMYDFPQYVLDEDLFMLTENMV
>NZ_CP022392.1|WP_003099272.1|798599_798929_+|CRISPR-associated-endonuclease-Cas2
MRMILMFDMPTDTSEERKAYRKFRTFLLSEGFIMHQFSVYSKLLLNNSANTAMIDRLQENNPKSGNITLLTVTEKQFARMIYLNGNRDTCIANSDDRIVFLGEEYKDET
>NZ_CP022392.1|WP_089180074.1|797721_798588_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVIVNTHSKLSYKSNHLIYKDASRTEMIHLSEIDILLLETTDIVLSTMLIKRLIDENILVIFCDDKRLPTALLAPYYGRHDSSLQLSKQISWPEDLRAEVWTKIIAQKILNQSMYLGSCGFYEKSQSIIDLYNGLEIFDPTNREGHSARIYFNTLFGNDFSREQDNVINAGLDYGYTLLLSMFARELVVCGCMTQFGLKHSNQFNHFNFASDIMEPFRITVDKIVYENRNKSFIQIKRYLFSIFSETYLYNNKEMYLSNIVSDYTKKVVKSLNNEGKGVPEFRV
>NZ_CP022392.1|WP_003099269.1|793615_797722_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MRKPYSIGLDIGTNSVGWAVITDDYKVPSKKMRIQGTTDRTSIKKNLIGALLFDNGETAEATRLKRTTRRRYTRRKYRIKELQKIFSSEMNELDIAFFPRLSESFLVSDDKEFENHPIFGNLKDEITYHNDYPTIYHLRQTLADSDQKADLRLIYLALAHIIKFRGHFLIEGNLDSENTDVHVLFLNLVNIYNNLFEEDIVETASIDAEKILTSKTSKSRRLENLIAEIPNQKRNMLFGNLVSLALGLTPNFKTNFELLEDAKLQISKDSYEEDLDNLLAQIGDQYADLFIAAKKLSDAILLSDIITVKGASTKAPLSASMVQRYEEHQQDLALLKNLVKKQIPEKYKEIFDNKEKNGYAGYIDGKTSQEEFYKYIKPILLKLDGTEKLISKLEREDFLRKQRTFDNGSIPHQIHLNELKAIIRRQEKFYPFLKENQKKIEKLFTFKIPYYVGPLANGQSSFAWLKRQSNESITPWNFEEVVDQEASARAFIERMTNFDTYLPEEKVLPKHSPLYEMFMVYNELTKVKYQTEGMKRPVFLSSEDKEEIVNLLFKKERKVTVKQLKEEYFSKMKCFHTVTILGVEDRFNASLGTYHDLLKIFKDKAFLDDEANQDILEEIVWTLTLFEDQAMIERRLVKYADVFEKSVLKKLKKRHYTGWGRLSQKLINGIKDKQTGKTILGFLKDDGVANRNFMQLINDSSLDFAKIIKNEQEKTIKNESLEETIANLAGSPAIKKGILQSIKIVDEIVKIMGQNPDNIVIEMARENQSTMQGIKNSRQRLRKLEEVHKNTGSKILKEYNVSNTQLQSDRLYLYLLQDGKDMYTGKELDYDNLSQYDIDHIIPQSFIKDNSIDNTVLTTQASNRGKSDNVPNIETVNKMKSFWYKQLKSGAISQRKFDHLTKAERGALSDFDKAGFIKRQLVETRQITKHVAQILDSRFNSNLTEDSKSNRNVKIITLKSKMVSDFRKDFGFYKLREVNDYHHAQDAYLNAVVGTALLKKYPKLEAEFVYGDYKHYDLAKLMIQPDSSLGKATTRMFFYSNLMNFFKKEIKLADDTIFTRPQIEVNTETGEIVWDKVKDMQTIRKVMSYPQVNIVMKTEVQTGGFSKESIWPKGDSDKLIARKKSWDPKKYGGFDSPIIAYSVLVVAKIAKGKTQKLKTIKELVGIKIMEQDEFEKDPIAFLEKKGYQDIQTSSIIKLPKYSLFELENGRKRLLASAKELQKGNELALPNKYVKFLYLASHYTKFTGKEEDREKKRSYVESHLYYFDEIMQIIVEYSNRYILADSNLIKIQNLYKEKDNFSIEEQAINMLNLFTFTDLGAPSAFKFFNGDIDRKRYSSTNEIINSTLIYQSPTGLYETRIDLSKLGGK
>NZ_CP022392.1|WP_003099267.1|793184_793400_+|hypothetical-protein
MNEIWKIKKHRIGVHFFKLITDKPYFNLLCCFEWFQQNNNIISLLKCQGKTKQNSSKTIIQLAYILAEILK
>NZ_CP022392.1|WP_003099264.1|792489_793131_+|TIGR01906-family-membrane-protein
MREKCRVIGLWLWLLSFAVLATIYLAWLSYPLEIDFLGIDKVVYMTKASILCHFNGLMSYLTNPFHQTLTFASFLSSKDGLAHFQDVKILFHVTQAIFVLLAFPSLKFLKTTIQKQLMPLYQNAFLSAAVCPVLIASFAFMIGFEQFFILFHKILFAGKSNWTFNPLTDPVIWILPESFFRHCFIAFFILYELAFWTLYSISKKQENNKKQTT
>NZ_CP022392.1|WP_003099262.1|791725_792493_+|TIGR01457-family-HAD-type-hydrolase
MKYKGYLIDLDGTIYMGKDPIPAGKAFIESLQAKELPYLLVTNNTTRTPEMIQEMLLKQFNIETPLKSIYTATMATVDYMNDMNRGKTAYVIGETGLKSAISAAGYQEDKETPAYVVVGLDTQLTYDMLATATLAIEKGALFIGTNPDLNIPTERGLLPGAGTLVALLEAATRVKPVFIGKPNAIIMNKALEILDIKRQDALMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVATLPIQPDYVLKSLDEWDFK
>NZ_CP022392.1|WP_003099260.1|790981_791716_+|acyl-ACP-thioesterase
MGLKYREQLRLSFDLCDVKCDVKLPLLLAYCMIISGKQSQQLGRSDAYVLDTYRFVWIITDHEFSFERIPKLHETITIETEALSYNKYFCYRQFTFFDQEGEKIGCLVTHFALMDFDTRKVAPIPEELVAIYQSEFSKKLRRTPRMQALQEAVEKDYNVRYYDIDLNGHVNNSKYLEWMYDVMGFAFLQSHRPKHIQVKYLKEVAPGGTVSSRYHLEDLKSYHEITSENAMNAQAIITWETITE
>NZ_CP022392.1|WP_003099259.1|789833_790964_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPSSAYIHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIAEFRYYDVKKLRTLYIGGGTPTSITASQLDYLLTELSRELDLQMLEEFTIEANPGDLSPDKIEVLKASAVNRISLGVQTFNDKHLKQIGRSHNEAQIYSTISALKEAGFHNISIDLIYALPGQTLEQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIIREMEANGFEHYEISNFSKPGFYSQHNLMYWNNDEYYGCGAGASGYLNGVRYRNRVPIQHYLKAVADGDARLSEEILSQKEMMEEEMFLGLRKKTGVSVTAFEEKFKCSFQELYGAVVSQLQEEGLLVNDDKVIRMTKKGLFLGDNVAEKFILE
>NZ_CP022392.1|WP_003099258.1|789134_789791_+|GNAT-family-N-acetyltransferase
MNQNQQDFEQGLDSPCHKLFTEMIPEFQEGYLSYVFQTEKKDIQKRRIKNINKSFHRLITEPSFYLMPLSQESAEEIANKWHYQPPYDFYDMTADIEDYKEILSADKRGDHYFQVLRNGVLFGFVGFFKRHDQLEIVLGMKPDYVGKGYGRAFFQAIEDYAKLQFAAKCHVLKVADFNKRAKHLYCQMGYKGVTVYNQKTNGSAYPFVRMEKWFSEKE
>NZ_CP022392.1|WP_003099276.1|800742_801165_+|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLIGQVLERIERRGFVIEKLELRQADAAILRKHYDFLVDKPFFPEIEAYMTSGPLLIGVLSGNRVVSSWRMMMGVTNPKDALPGTIRGDFGQAPGDDGGIQNVVHGSDSIDAARREIDIWFASQE
>NZ_CP022392.1|WP_003099277.1|801213_801465_-|hypothetical-protein
MKDLSSLTAKKKIVDGVQLDMFEGRQNKNNTSGYKGVYKHYKGYVARICVKGVHHRGVTRKTKEEAYQDRLALERKFLPRLDS
>NZ_CP022392.1|WP_003099280.1|801844_803677_+|elongation-factor-4
MNSQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYKAKDGETYILHLIDTPGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVEKPLQALIFDSAYDAYRGVILQVRIINGIVKPGDKIQMMSNGKTFDVTEVGIFTPKTVGREFLATGDVGYIAASIKTVADTRVGDTVTLANNPAQEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVMTTDGQMLEVSNPSEFPDPTKVDHIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNAEKVDALSFIVHKEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDEDSKK
>NZ_CP022392.1|WP_031239422.1|803787_804231_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MIDKEKLRQTIGDLAYKVTQEAATEPAFTGEYDHFFEKGIYVDVVDGQVLFSSDDKYQSGCGWPAFTKPIDNRQVTNHQDNSYGMRRVEIKSRQAQSHLGHVFNDGPKEEGGLRYCINSAALRFIPYEQMAKEGYGEWLSLFDGKKE
>NZ_CP022392.1|WP_003099283.1|804233_804890_+|HD-domain-containing-protein
MLSPKEKDILAAAEKWVSQKLADDASGHDWWHIVRVRNTAVTIAQKENANLFICQLAALLHDMTDEKLHQDRVKAEKDLKNWLEQQSLAASQKQQIRDIIESISFKAGHGKPAESIEAKVVQDADRLDAIGAIGIARCMAYSGHKGRLIHDPNRKARQNLSVDDYRNGKDTAIMHFYEKLLQLKDLMNTEYGYFLAQQRHAFLESYLEEFYAEWDGLR
>NZ_CP022392.1|WP_003099287.1|804909_805374_+|GNAT-family-N-acetyltransferase
MIRLATRHDIPELLLLLEEIRRHHQTVRPDLFRADGGKFDAKELELLLYNPNKPIYVYTDDHDKVLGHLFLQFKVSESPVRIPRKVLYVEDLCVNAHYRGQGIGRQLMAFAKDFAREKGCYQVTLNVWNANKEAYAFYERLGFVPQQTQMERNL
>NZ_CP022392.1|WP_003099289.1|805613_806738_+|DUF2974-domain-containing-protein
MPLNELDIAAINEIGYLSFDDLVEESVDASGVFDLSKMLVNDKDDTKASVYNFLITKERVALFCAIRDSKRFNDLSLSHYVNEVDPEFEKQFAAMVFTIPEINHTQMIFRGTDDSLIGWKEDFKLTYMKEVAANRSALSYLNAYLMNHPNKELVLSGHSKGGHLALYAAAFLASDLQEQLTVIYLLDSPGLAEEFLQREGYRAIRKRLRVIRPQESVVGVMLYCDVKPRIVKSASFGLLQHKTCNWQVSLDGQFEQATQASHLSKTLELVFKDWTKQLSKRDLKLVCDSLFDALISSGITSLNAFTLNDKAFVTFFQIIGSLHSLDQSKKSIIMKSVQQLIIDYTGYRKREVTEKIQLTLSKYLKKTKAKSKGE
>NZ_CP022392.1|WP_003099292.1|806820_807666_+|aldo/keto-reductase
MIERLKLNNGLAIPALGLNTWLVENARAESLVSQALKLGYRHIDTAQAYGNEVGVGKGLFISGLPREEIYVASKMTAEHQNYELAVASIDDSLRKLGLDYLDLMLVHCSQVGSGNASTHKVANHLEVWRALEDAHSAGKIKSIGLSCFLMDDLKTIEKHARIKPAVNQILTHIGNTPLELISYCQQKAIVLEAYSPIVYEQALQSPEIKEMANHYHVTPAQLCIQYVLQLGMVALPKTENPQHMISNQQLDFKISKKDMAILKALDFKVDGNNSQEEVFYS
>NZ_CP022392.1|WP_003099294.1|807774_808794_+|YeiH-family-putative-sulfate-export-transporter
MKSINEKIPGILICLAIALPSWLLGHYLPLIGAPVFAILSGMLCAMFYQKREKSQAGISFTSKYILQFAVVLLGFGLNLKQIMSVGLESLPIILSTIATSLLVAYCLQKKLKLDINTATLVGVGSSICGGSAIAATAPVIDAKEDEIAKAISVIFLFNILAALLFPSLGQLLGLSNHGFAIFAGTAVNDTSSVTATAASWDALHHSNTLDGATIVKLTRTLAIIPITLFLSYYKAKHAKESTRGQEFSLKKAFPTFIIFFLLASLVTSLASVFGLPMAIFDSLKVLSKFFIVMAMAAIGLNSNLPKLIKTGGQAIFLGAICWLSITLVSLVMQLMMGTW
>NZ_CP022392.1|WP_003099297.1|808977_809595_+|hypothetical-protein
MRKFLQDLETEVSHYLELALSFILTVAMIFFAISLISDLAGFMSSRIDNNNLFELVLGRAMSLAVGVELIKMLSKPSPGTVIEVLLFAITRQLIVDHPNMTDFLLGIIAVAVLFAVRRYLFIQFDDASRMIIRASHKIKMVNIIAHVKIKAEKDDTLRSFMTRKLEEDEQTISVGSIVYLKNVALRVEKMHGESISRVEVIRGIY

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Crispr_ID: NZ_CP022392_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022392_2

1163695-1163836

Orphan

Consensus_repeat	Method
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022392_2

>merge|NZ_CP022392|2|1163695-1163836|CRISPRCasFinder
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAAACCTTTATTCTTAGGCGCGTTTACAGTTTTAAGCTCGCCCTTAAAAATGCCCACTGGGCAAAGTTAACTCTTATTGTTTTAGCTATAAAACTATAAGAA

>NZ_CP022392|2|2|1163695-1163836|CRISPRCasFinder
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	ACCTTTATTCTTAGGCGCGTTTACAGTTTTAAGCTCGCCCTTAAAAATGCCCACTG
GGCAAAGTTAACTCTTATTGTTTTAGCTATAAAACTATAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022392.1\|WP_089180087.1\|1167912_1171560_-\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_CP022392.1\|WP_000048058.1\|1167602_1167779_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP022392.1\|WP_003099970.1\|1160043_1160976_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133039
NZ_CP022392.1\|WP_003099971.1\|1160965_1162120_-\|DUF1972-domain-containing-protein	unknown	unknown	gnl\|CDD\|340858
NZ_CP022392.1\|WP_003099986.1\|1176590_1177661_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP022392.1\|WP_003099965.1\|1156783_1158049_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP022392.1\|WP_003099967.1\|1158068_1159235_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
NZ_CP022392.1\|WP_003099969.1\|1159234_1160041_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
NZ_CP022392.1\|WP_003099981.1\|1171556_1174793_-\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291
NZ_CP022392.1\|WP_003099963.1\|1155530_1156757_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP022392.1\|WP_003099988.1\|1177663_1178044_-\|salt-stress-induced-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP022392.1\|WP_003099960.1\|1154557_1155538_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP022392.1\|WP_016356047.1\|1165017_1166829_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP022392.1\|WP_003099984.1\|1175910_1176582_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP022392.1\|WP_003099975.1\|1163899_1165009_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
NZ_CP022392.1\|WP_003099977.1\|1166957_1167335_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|376605
NZ_CP022392.1\|WP_003099982.1\|1174956_1175880_+\|neutral-zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|282131
NZ_CP022392.1\|WP_003099959.1\|1153211_1154522_-\|DUF2142-domain-containing-protein	unknown	unknown	gnl\|CDD\|370749
NZ_CP022392.1\|WP_003099974.1\|1163185_1163524_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP022392.1\|WP_003099972.1\|1162237_1163092_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904

Protein	Function_ID	Function_description	E-value
NZ_CP022392.1\|WP_089180087.1\|1167912_1171560_-\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP022392.1\|WP_000048058.1\|1167602_1167779_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	9.89287e-11
NZ_CP022392.1\|WP_003099970.1\|1160043_1160976_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.81505e-85
NZ_CP022392.1\|WP_003099971.1\|1160965_1162120_-\|DUF1972-domain-containing-protein	gnl\|CDD\|340858	cd04955, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea.	0
NZ_CP022392.1\|WP_003099986.1\|1176590_1177661_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	8.71601e-09
NZ_CP022392.1\|WP_003099965.1\|1156783_1158049_-\|hypothetical-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.18249e-07
NZ_CP022392.1\|WP_003099967.1\|1158068_1159235_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	8.97088e-114
NZ_CP022392.1\|WP_003099969.1\|1159234_1160041_-\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.62687e-49
NZ_CP022392.1\|WP_003099981.1\|1171556_1174793_-\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP022392.1\|WP_003099963.1\|1155530_1156757_-\|hypothetical-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	7.57125e-10
NZ_CP022392.1\|WP_003099988.1\|1177663_1178044_-\|salt-stress-induced-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	0.000232849
NZ_CP022392.1\|WP_003099960.1\|1154557_1155538_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.20376e-17
NZ_CP022392.1\|WP_016356047.1\|1165017_1166829_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP022392.1\|WP_003099984.1\|1175910_1176582_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.96473e-94
NZ_CP022392.1\|WP_003099975.1\|1163899_1165009_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP022392.1\|WP_003099977.1\|1166957_1167335_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	1.06476e-42
NZ_CP022392.1\|WP_003099982.1\|1174956_1175880_+\|neutral-zinc-metallopeptidase	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	4.49769e-145
NZ_CP022392.1\|WP_003099959.1\|1153211_1154522_-\|DUF2142-domain-containing-protein	gnl\|CDD\|370749	pfam09913, DUF2142, Predicted membrane protein (DUF2142). This domain, found in various hypothetical prokaryotic proteins, has no known function.	5.00632e-42
NZ_CP022392.1\|WP_003099974.1\|1163185_1163524_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	2.41323e-41
NZ_CP022392.1\|WP_003099972.1\|1162237_1163092_-\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.41324e-132

>NZ_CP022392.1|WP_003099974.1|1163185_1163524_-|metal-sulfur-cluster-assembly-factor
MTEQKKYSDQEVSKIKDRILEALEMVIDPELGIDIVNLGLIYEIRFEATGHTEIDMTLTTMGCPLADLLTDQIYDVLKEIPEVTSSEVKLVWYPAWTVEKMSRYARIALGIR
>NZ_CP022392.1|WP_003099972.1|1162237_1163092_-|dTDP-4-dehydrorhamnose-reductase
MILITGSNGQLGTELRYLLDERNEDYVAVDVAEMDITNSEKVDDVFAQVKPTLVYHCAAYTAVDAAEDEGKALNQAINVDGTENIAKACQKHQATLVYISTDYVFDGKKPLGQEWLETDIPNPQTEYGRTKRLGEEAVEKYTDKFYIIRTAWVFGNYGKNFVFTMQNLAKSHDILTVVNDQHGRPTWTRTLAEFMCHLAENKKEFGYYHLSNDAKEDTTWYDFAKEILKDTTVDVKPVDSSAFAAKAKRPLNSTMNLDKAKATGFVIPTWQDALGEFYKQEVKK
>NZ_CP022392.1|WP_003099971.1|1160965_1162120_-|DUF1972-domain-containing-protein
MRDVFIIGSRGLPAQYGGFETFVEELINHQVSHDITYHVACLSDEKGKKDSNYKGARCFYIAPPKLGPARVIAYDMLAIKKALTYIVQHDIKNPIFYILGNTIGAFMSPFVKAIKKRNGLFFINPDGLEWKRSKWSKPVQTYLKFSEKKMCQLADLVISDNIGIEAYLNQNYKSAKTTFIAYGTETGKSQLAFEDESVRNYFYQNKLSEKDYYLVLGRFVPENNYETIIREFMLSKTSRDLVIITNHQGNPYFEKLRTITLCDKDPRIKFVGTVYDKELLIYIRENAFAYIHGHEVGGTNPGLLEALAHTNLNLVFGVDFNKSVAQTAALYWTKTANDLAQLIESVDQRSHYEDLGKEAKRIIEEEYTWKKIVGEYEALFLNEN
>NZ_CP022392.1|WP_003099970.1|1160043_1160976_-|glycosyltransferase-family-2-protein
MKINILMSTYNGEKFLAQQIESIQKQTVKDWNLLIRDDGSTDRTPQIIQEFAKTDSRIRFINPNNRQNFGVVKNFHTLVKFEEADFYFFSDQDDVWLEDKLALTLAESDRYELKKPLLIYTDLKIVNQKLEVTNDSMIKTQSHHANTSLVEELTENTVTGGTMMINHALAKEWTVTENLLMHDWYLALLASGLGNLVYLDHPTELYRQHDSNVLGARTWSKRMKNWIRPHKLIDKYWWLITSSQKQAKLLLDHDLSTKDYDMVQDYVTLLDKNLKQRIITLKKYGFKKNRAFHTLVFSSLIITKFGYRRQ
>NZ_CP022392.1|WP_003099969.1|1159234_1160041_-|ABC-transporter-permease
MNFLTVKNRILLREMVRTDFKLRYQGSFIGHLWSILKPMLLFTIMYLVFVRFLKFDDGTPHYAVSLLLGMVTWNFFTEATNMGMLSIVSRGDLLRKINFPKEIIVISSVVGASINYFINIIVVFAFALINGVKPSFGILILLPLFIELFLFAAGVAFILATLFVKYRDMGPIWEVMLQAGMYSTPIIYSITYIIQRGHLSIAKVMMMNPLAQIIQELRHFIVYSGATINWDIFDNKLFTLIPIIISVGSFIVGYTVFKRNAKKFAEIL
>NZ_CP022392.1|WP_003099967.1|1158068_1159235_-|ABC-transporter-ATP-binding-protein
MSEKKVVLSVDSVSKSFKLPTEASHSLRTSLVNYFKGIKGYTEQHVLDNVSFEVEEGDFFGIVGRNGSGKSTLLKIISKIYDPEKGKVTVDGKLVPFIELGVGFNPELTGRENVYMNGALLGFSREEVEAMYNDIVAFAELHEFMDQKLKNYSSGMQVRLAFSIAIKAKGDILILDEVLAVGDEAFQRKCFDYFAQLKRDNKTVILVTHSMEQVQRFCNKAMLIDKGHQVEVGTPLEISQIYKQLNGLDVAKESNKKTENNGISLSSQFFNRDNKTLDFNFEVHFEDIIEDPVLTFTIHKDTGELLYRWVSDEEIDGQLEVSNAKISIDFAIQNIYPNGKFTTEFGVKSRDRSKEYAMFSGICDFELINRGKSGNNIYWKPETKVNLH
>NZ_CP022392.1|WP_003099965.1|1156783_1158049_-|hypothetical-protein
MYKGKRFLLTHIWLRGFSGAEINILELATYLKKEGAKVEVFTFLASSPMIEEFQKRDISVIDDINYPFDINCYDVIFSAQNIIPSAIVNALGKKQEKCPKFIFIHMAALKEHVLEQPYIYGLEEKLSSATLAISEEIVQKNLKRFFKGIPNLQYYPNPVPEEYALQVHEQKTAPESILVISNHPPKEVMGIKTLLNAKGIKVDFFGVWSDHYQLVSPDLIAGYDCVIGIGKNVQYCLAMGKPIYVYDHFKGPGYLTAENIEQAAFNNFSGRGFEKCRKTSQEIVSDLLAGYQSAQSFQKKHIEEYRNRYTISNNMSRIFSSLESSDHPIDLLEKQDIEYINAINLLIQSKIVGLENDVANLWEGIHRLESIEKQMKSEREDLLQQLEAKNQELASINASRMFKFCQVLWKVKAFIFPNKTH
>NZ_CP022392.1|WP_003099963.1|1155530_1156757_-|hypothetical-protein
MITKIIRSYKDEGGRATLRKIRHRLQGGSHQQEAGKIDLNRIPIMPQLEDIAKADYINNPYQKPSKISKEKLNIAWVSPPVGKGGGGHTTISRFVKYLQSKGHHITFYIYHNNTIDQSPKEAQEIFSKAYGIDVKVDRLEEFKNQDLVFATSWETAYAVFNLQGENLHKFYFVQDFEPIFYGVGSRYKLAEATYKFGFYGVTAGKWLTHKLKDYQMDADFFDFGADTDIYKPKQVLKKKKKIAFYARAHTERRGFELGVMALKIFKDKHPEYDIEFFGQDMSNYDIPFDFIDRGILNKEELADIYHESVACLVLSLTNVSLLPLELLVAGCIPVMNSGDNNTMVLGDNDDIAYAEAYPVALAEELCKAVERANIDDYANEISQKYDTISWEASYQKVEEIIRREVIND
>NZ_CP022392.1|WP_003099960.1|1154557_1155538_-|glycosyltransferase-family-2-protein
MTDKLKATVFIPVYNGENDHLEETLTALYAQKTDFLWDLIITNSESKDNSVAIIEKFAEKYGNLKLIQLKKSDYSHGATRQMAAQESSAEYMVYLSQDAVPANDNWLSEMVKPFEFNDKIVAVLGKQKPRLSCFPAMKYDINAVFNEQGVADALTIWTRDDENLKGKYTKESFYSDVCSAAPRDFLVNQIGYRHVAYSEDYEYGKDILDAGFMKAYNSQAVVEHSNDILLSEYKSRIFDETYNVRLNSGVTTKISMVTVLRQAAKASVKDAMNIISDKDYSWKRKLYWLAINPLFHLEKWRGMRLANQVDLTSEQSKYSLEKRKEI
>NZ_CP022392.1|WP_003099959.1|1153211_1154522_-|DUF2142-domain-containing-protein
MKVEKMYLLLASLLISLSILIMPVTQVPDERVHAHFAWDIVYQEKPQKHTWLQGTGIENKQPADKAINFKGYQKFFTQKIDFSKEKTRLKFSIVNIRHIPQLIGMVIGKMIYPSAGVIITAGRITNAFIYILAIYYLIKYIKVGKYTLMFISLLPMMIHQAGSLSYDVLNFVAIASFFVCYINLMIDKKVTWKKLFGYLLLIILLYAVKPNNLLLFPLIGFINFRFEGPYINKLNPILEFWQRNRLKIVVLLTLLCLIVLTFVLSKRTSVLHFIHMIFNTLFVNNLNPDLNNVLTTGVFGFFGMLVIQMPAWVIWLNIFVLTIVFLQEAQSHLNDVTTKEVGISSFIMVLLQVVVIIITMYFAWTPKMLGENANISVGAQGRYFTPFLLYLFPLFMSLKNYFNFYLNKKLFVPLVLGTIVFNYVIYNILIMLYYWV
>NZ_CP022392.1|WP_003099975.1|1163899_1165009_-|RNA-polymerase-sigma-factor-RpoD
MAKENEITTFNVQVADFIRNHKKEGSAVDDEITEKLVIPFVLDADQIDDLLERLTDGGISITDKEGNPSAKYIVEEPKPEELTDEQLIGSNSAKVNDPVRMYLKEIGVVPLLSSDEEKELAVAVAEGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKQLRDFIED
>NZ_CP022392.1|WP_016356047.1|1165017_1166829_-|DNA-primase
MGLLWGGDDLAIDKEMISQIKNSVNIVDLIGEVVGLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIVAEKSGIAIDLAPQRQYENPRASAHQELIRIHEDAQKFYHAVLMTTTQGQLAREYLYQRGLDDSLIDHFRIGLAPDESDYLYQTLSKKYSEESLLTSGLFNLSERNNLVYDAFRQRIMFPLTNERGDTIAFSGRIWTENDTEQKLAKYKNSRATVLFNKSYEFYHLDKAKPIITKKHEVYLMEGFMDVIAAYRAGAENAIASMGTALTPEHVKHLKKLTKKVILTYDGDNAGQNAIAKSLDLLTDLQVEIVRIPNQMDPDEFIQQNSAEALSDLLSHSRISSTEFLIEYLKPGNMDNLQSQIAYVEKIAKIIAASPSITAQNSYINRVADLLPDFDYLQVEQTVNSYRIQDRQNRQGQIPQVQTALVGLPVNKSVTALIKAENHLLHRLIHHDYLLNEFRNKEDFYFDTQELQSLYNLLKESGEISPYDLSQMNPQVSQAYYRVLEENLPDEVADSEINDILVKRNRLISERDILKQGKQVRESSNKGDHQLALEVLENLIAQKRNME
>NZ_CP022392.1|WP_003099977.1|1166957_1167335_+|large-conductance-mechanosensitive-channel-protein-MscL
MIKELKEFLFKGNVLDLAVAVVIGAAFKTIIDSLVADVITPLIGLLFGAPDFSSIKLFNAILIGNFINAVVNFLIVGTVLFFVVKAANKAMSFNKKEEIEEEVIAGPTQEELLVQIRDLLAKKEA
>NZ_CP022392.1|WP_000048058.1|1167602_1167779_-|30S-ribosomal-protein-S21
MSKTVVRKNESLDDALRRFKRSVTKAGTLQESRKREFYEKPSVKRKRKSEAARKRKKF
>NZ_CP022392.1|WP_089180087.1|1167912_1171560_-|helicase-exonuclease-AddAB-subunit-AddA
MNFEPFLDAKAIIALQEAEMASDKVQKRTAEQIEAIYSHGQNILVSASAGSGKTFVMVERIIDKIMRGVAIDRMFISTFTVKAATELKERLEKKLIEAIKSQHNPDVKHYLSEQLHHLDQADIGTMDAFTQKLVSQYGYSLGISPKYRIMQEKSEQDILKTEVFDKLFESYMQKHQGIFIALVQNFSGKAKTANSFKQLVYQIHQFCQSTDNPKKWLAQNFLKGVHHYQGFADYPKEELELFLECMQKTAAALQDITDLEDYKQVTAKGSETKAYQKHKQMIASLYEFSTHFETMYGFAKISQLAQDLTALLPSGQSVTVAGQKYPVFKDLQNHLEGLRHLDIIFQYQGESLPLLELLQAFIADFSEAYLQAKMAENAFEFSDIAHFAISILEGNEAVRLAYQEHYHEVMVDEYQDNNHMQERLLELLSTGQNRFMVGDIKQSIYRFRQADPQIFNAKFKDYQENPQHGQLIILKENFRSQSEVLDVTNAIFTHLMDEAVGDILYDGNHQLLAGSDRQKKEHPENKCQFLIYNTDLADDSDESTTLEESESDGISPWQVKLLVKEIIKLHTEEGVPFSDITLLVSSRTRNDTIFQAFNHYGIPLVADGGQTNYLKSVEVMLMLDTLRTINNPLNDYALVALMRSLMFGFDEDQLARIALQGSNSGKIDSFYEKLCNCLKGEGEHPELISSDFKMELEQFHNTLDSWRHFAKSHSLYDLIWKIFNDRFYYDLVATSPKAEQAQANLYALALRSSQFEKTGFKGLSRFIRMIDKILETQNDLVDVEIDQPKNAVNLMTIHKSKGLEFKYVFILNCDKRFSMTDLHSPLILDREMGIGIKYIADVKEQVEAQHLNSLKVSLETLPYQLNKNRLKRATLSEQMRLLYVAMTRAKKKLYLIGKGSQQKAQDAFSGQRTGNHLSQELRESLTTFQDWILAISENFKEDLHFDLVYVSDKDLTANQIGRLSKESFLNQKDNQKDNRQTLEIARAIDMLDKVSELNQLYDAAIHLPTVRTPSQLKKYYEPLMDNDGVDVIDKQTYSQKTYKLPNFSKSKVVESSQIGSALHELMQRITVSDKVSMREIKDALALVSADDSVKEKIDLKKILAFFQETDLGQKIQAKRAFLHREAPFAMLKKDPKSQEKFVVRGIIDGYLLFDDRIVLFDYKTDRYSTSLDMVNRYSMQMELYAQALKQAYRINKIEKYLVLMGGQTIEVVAVD
>NZ_CP022392.1|WP_003099981.1|1171556_1174793_-|ATP-dependent-nuclease-subunit-B
MRLLYTDISQSLTEILVNQAASFAKSGYRVFYIAPNSLSFEKERAVLEHLEEEASFAITVTRFTQMARYFTINSKRSGKTLTDNALTMFFYRALLLIAPKDLSIYGPLKRDLTFIKQLVDLYKELKTSNISILDLHLDNEERKNDLIAIFAMVSDLIRQDQFEDQTPLAYFAQAICSRELEKELSKTVVVIDGFTRFTAEEDYLVSLLNDKCHQVVIGTYISQKAFQKSFVKGNVYQASIEFMGQLSKDYHCKAEFMSSSMVYPETFSKLSRLFEAKNDFSELDIVLEEDDKSAIAIWQNPNQKEEIEHVAKAIRQKLYEGYRYKDILVLLGDVEAYQLQIGPIFDKYDIPYYFGKSESMSHHPLVHFMESLERSKRYNWRREDIINLLKSGLFGHFENTSIDQFEYYLDYADINGFTKFSRPFSINPKGKQDLPIFHLESLNHLRKQLFDPLATLFKSQQQLGKSLMKKLVFFFETIDLTGNFQQLSEEESENDREKNDEVWKVFISILEEFQLIFAEEKLSLDDALSLLKVAMQAAEYRAVPATLDVVTVTSYDLVQAHSNAFVYALGLTQTHFPKHSKNSSLISDDERLMTNDRQDQFHRLEIASYENGKKNHYTALSLFNAATKELVLSQPSLINEMSDHSSPYLLDLIHFGVPLIEKGKNQFSNRETDIGHYKSLLSQLIDINRQALDQEFSPEDNNFWTVMLRYLKKRLKENKISFQEQKNHLQTKKLAPEVLARRFPEDKPLSLSSSALSVFYNNQYKYYLQYVLGLEEKGSIHPDARQHGTYLHKVFEVIMSDHSAASFDAKVQKAIEEVNQETSFKTFYQQDAQGEFSLRQLEAIVKSTARILDLSQSIKVLKQEDHFKIALGKELLINGTIDRIDQLPDASVGIVDYKSSAQAFEIDQFYNGLSPQLVTYLTALKDNNPDGKLFGAMYLHMQDPKFDLKKYKQLDEKVLTDFYSEMTYKGIFLETEKEYLSNGLYKTSKNLYSEQEIDLLIQFNKHLYYKALEQIKSGHFLINPYSKDGRSVQGDQLKAITGFESDLDLGQARLLVKGSSNEKRQEFLSLMEKEVRSK
>NZ_CP022392.1|WP_003099982.1|1174956_1175880_+|neutral-zinc-metallopeptidase
MKTDDLRESQNVEDRRGQASSSYNGSSGSSGGGMLLQLLFSRGGWKTKLIIVIIMLVMGGGGLSGVLTGEQSSPSNNSYQSTKINRTKGDKASQEQVTFVSKVFASTEDYWTKTFQEQGLTYKKPTLVLYTGTTQTACGQGQAAAGPFYCSADKKVYLDISFYDELTHKYGASGDFAMAYVIAHEVGHHIQNEIGTMSKYAQARQGKSQTQANQLNVQLELQADYYAGAWAKYVQGQNLLEKGDIDEAMTAAHAVGDDKLQKEAYGRVVPDSFTHGSSEQRQRWFNKGFEYGDFDHGNTFSIPYSDL
>NZ_CP022392.1|WP_003099984.1|1175910_1176582_-|ABC-transporter-ATP-binding-protein
MERILQFIGVSKTFQDGNQKIQALKATDFTIEAGQFVAVIGPSGSGKSTFLTLAGGLQTPTKGQIIINGSDYTQLPEKERAKRRFEDIGFILQTSNLIPFLTAEQQLELVDRLSQKRNHDQKQTLFKELEISHLAKKFPKDISGGERQRLAIARALYNNPALILADEPTASLDTKRAHEVVSLLLKECREKNKAIIMVTHDQRMIEECDYVYYMEDGVLRKHH
>NZ_CP022392.1|WP_003099986.1|1176590_1177661_-|ABC-transporter-permease
MFLALNEMKEAKLKYSLITGLLLLIAYLMFFLSGLANGLVQENKSAIDYWKADLVFLAKDANATLNLSQIPKDKKKQIDAAKITSLQQFNTVAWTKVKPNEEDKQKVSLFGIEANSFLLPPLLKGRTLKGQNEALIDKSLADKSGFELGDHIQFLNQDKTVKIVGITNKATFNVSPVIYMSQETFKPFMRPSKTGDMLVNAFIVQGKVDNYPKSDFQKLSLESFITKLPGYNAQVLTFAFMIGFLILISAIIISIFMYVLTIQKAPIFGIMKAQGISNKVIANALLTQTFLLSIIGSSAGWLLTGLTALLLPKAVPFQGNLGLDSLIFTSLILCALLGTLFSVLATVRIDPLKAIG
>NZ_CP022392.1|WP_003099988.1|1177663_1178044_-|salt-stress-induced-protein
MYHHHIYGDRLFHTRSNGYGTSVELFGSTENGETPMSLMNIALASCVTMCVQSFWKHTFGDNQARIETSIDYEEGGFYLNVTLPALLTQHLENALRDFVAQKCRVKQLLAKDVTVVIDFHYHSKGA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022392_1	1.7\|800119\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800119-800148	30	MK448723	Streptococcus phage Javan271, complete genome	37552-37581	1	0.967
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_024214	Lactococcus phage P162, complete genome	53210-53239	1	0.967
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_024215	Lactococcus phage P078, complete genome	52079-52108	2	0.933
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_024208	Lactococcus phage P118, complete genome	51800-51829	2	0.933
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_024203	Lactococcus phage P092, complete genome	51140-51169	2	0.933
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK448723	Streptococcus phage Javan271, complete genome	12457-12486	3	0.9
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK449000	Streptococcus phage Javan64, complete genome	13581-13610	3	0.9
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK448990	Streptococcus phage Javan584, complete genome	6936-6965	4	0.867
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK448896	Streptococcus phage Javan278, complete genome	9500-9529	4	0.867
NZ_CP022392_1	1.6\|800053\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800053-800082	30	MK448775	Streptococcus phage Javan489, complete genome	10778-10807	4	0.867
NZ_CP022392_1	1.6\|800053\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800053-800082	30	MK448794	Streptococcus phage Javan525, complete genome	8973-9002	4	0.867
NZ_CP022392_1	1.6\|800053\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800053-800082	30	MK448763	Streptococcus phage Javan451, complete genome	8003-8032	4	0.867
NZ_CP022392_1	1.6\|800053\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800053-800082	30	MK448777	Streptococcus phage Javan491, complete genome	7102-7131	4	0.867
NZ_CP022392_1	1.6\|800053\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800053-800082	30	MK448765	Streptococcus phage Javan459, complete genome	8973-9002	4	0.867
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK448806	Streptococcus phage Javan565, complete genome	8490-8519	5	0.833
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK448818	Streptococcus phage Javan597, complete genome	10092-10121	5	0.833
NZ_CP022392_1	1.7\|800119\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800119-800148	30	MN693725	Marine virus AFVG_250M494, complete genome	11387-11416	5	0.833
NZ_CP022392_1	1.7\|800119\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800119-800148	30	AP013455	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C40	7221-7250	5	0.833
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MK448665	Streptococcus phage Javan1, complete genome	13693-13722	6	0.8
NZ_CP022392_1	1.11\|800383\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800383-800412	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	887525-887554	6	0.8
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	92331-92360	6	0.8
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	81923-81952	6	0.8
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	33576-33605	6	0.8
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	AP014355	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C68, * SEQUENCING IN PROGRESS *	2647-2676	6	0.8
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	13713-13742	7	0.767
NZ_CP022392_1	1.3\|799855\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799855-799884	30	JF713456	Vibrio phage 1, complete genome	46854-46883	7	0.767
NZ_CP022392_1	1.4\|799921\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799921-799950	30	NC_028666	Streptococcus phage Str-PAP-1, complete genome	20508-20537	7	0.767
NZ_CP022392_1	1.8\|800185\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800185-800214	30	AP014441	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S33-C93, * SEQUENCING IN PROGRESS *, 11 ordered pieces	6536-6565	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP045792	Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence	21070-21099	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP023547	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence	3254-3283	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP040242	Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence	7980-8009	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_022656	Campylobacter coli 15-537360 plasmid pCC42yr, complete sequence	25353-25382	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	CP013736	Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence	23646-23675	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP017867	Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence	14281-14310	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP017880	Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence	19495-19524	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP017874	Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence	21449-21478	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_MH634990	Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence	9178-9207	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP028188	Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence	18573-18602	7	0.767
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	MT774393	CrAssphage cr127_1, complete genome	59253-59282	7	0.767
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MN882552	Butyrivibrio virus Bo-Finn, complete genome	28207-28236	8	0.733
NZ_CP022392_1	1.1\|799723\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799723-799752	30	MN693509	Marine virus AFVG_25M367, complete genome	53357-53386	8	0.733
NZ_CP022392_1	1.5\|799987\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799987-800016	30	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	106961-106990	8	0.733
NZ_CP022392_1	1.5\|799987\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799987-800016	30	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	148900-148929	8	0.733
NZ_CP022392_1	1.5\|799987\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799987-800016	30	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	274071-274100	8	0.733
NZ_CP022392_1	1.5\|799987\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799987-800016	30	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	10900-10929	8	0.733
NZ_CP022392_1	1.6\|800053\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800053-800082	30	NZ_CP021332	Maritalea myrionectae strain HL2708#5 plasmid pHL2708Y3, complete sequence	128665-128694	8	0.733
NZ_CP022392_1	1.7\|800119\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800119-800148	30	KT381880	Citrobacter phage Margaery, complete genome	55809-55838	8	0.733
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	64886-64915	8	0.733
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	MN693959	Marine virus AFVG_250M1110, complete genome	36135-36164	8	0.733
NZ_CP022392_1	1.3\|799855\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	799855-799884	30	NZ_LR134422	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 13	37386-37415	9	0.7
NZ_CP022392_1	1.8\|800185\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800185-800214	30	NZ_AP017919	Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ5 DNA, complete sequence, phylotype ProJPt-1	1933-1962	9	0.7
NZ_CP022392_1	1.13\|800515\|30\|NZ_CP022392\|PILER-CR,CRISPRCasFinder,CRT	800515-800544	30	NC_010183	Bacillus mycoides KBAB4 plasmid pBWB404, complete sequence	32766-32795	9	0.7

1. spacer 1.7|800119|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 1, identity: 0.967

cgaaaggtactataaccgatgaagatatta	CRISPR spacer
cgaaaggtactataaccgatgaagatattg	Protospacer
*****************************.

2. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_024214 (Lactococcus phage P162, complete genome) position: , mismatch: 1, identity: 0.967

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattaaatataacatcaacaccttta	Protospacer
****************.*************

3. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_024215 (Lactococcus phage P078, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

4. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_024208 (Lactococcus phage P118, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

5. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_024203 (Lactococcus phage P092, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

6. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 3, identity: 0.9

aagcggaacagatgacaatatatgattttt	CRISPR spacer
atgcgaagcagatgacaatatatgattttt	Protospacer
* ***.*.**********************

7. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK449000 (Streptococcus phage Javan64, complete genome) position: , mismatch: 3, identity: 0.9

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agggggaacagatgacaatatttgattttt	Protospacer
*.* ***************** ********

8. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448990 (Streptococcus phage Javan584, complete genome) position: , mismatch: 4, identity: 0.867

aagcggaacagatgacaatatatgattttt	CRISPR spacer
aggtggagcagatgacgatatatgattttt	Protospacer
*.*.***.********.*************

9. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448896 (Streptococcus phage Javan278, complete genome) position: , mismatch: 4, identity: 0.867

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agggggaacaaatgacaatatttgattttt	Protospacer
*.* ******.********** ********

10. spacer 1.6|800053|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 4, identity: 0.867

tagatccccgcatttttgacgaaaaagctc	CRISPR spacer
ttgacccccgtatttttgacgaaaaagcta	Protospacer
* **.*****.******************

11. spacer 1.6|800053|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 4, identity: 0.867

tagatccccgcatttttgacgaaaaagctc	CRISPR spacer
ttgacccccgtatttttgacgaaaaagcta	Protospacer
* **.*****.******************

12. spacer 1.6|800053|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 4, identity: 0.867

tagatccccgcatttttgacgaaaaagctc	CRISPR spacer
ttgacccccgtatttttgacgaaaaagcta	Protospacer
* **.*****.******************

13. spacer 1.6|800053|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 4, identity: 0.867

tagatccccgcatttttgacgaaaaagctc	CRISPR spacer
ttgacccccgtatttttgacgaaaaagcta	Protospacer
* **.*****.******************

14. spacer 1.6|800053|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 4, identity: 0.867

tagatccccgcatttttgacgaaaaagctc	CRISPR spacer
ttgacccccgtatttttgacgaaaaagcta	Protospacer
* **.*****.******************

15. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448806 (Streptococcus phage Javan565, complete genome) position: , mismatch: 5, identity: 0.833

aagcggaacagatgacaatatatgattttt	CRISPR spacer
gggtggagcagatgacgatatatgattttt	Protospacer
..*.***.********.*************

16. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448818 (Streptococcus phage Javan597, complete genome) position: , mismatch: 5, identity: 0.833

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agatggagcagatgacgatatatgattttt	Protospacer
*...***.********.*************

17. spacer 1.7|800119|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MN693725 (Marine virus AFVG_250M494, complete genome) position: , mismatch: 5, identity: 0.833

cgaaaggtactataaccgatgaagatatta	CRISPR spacer
agaaaggtactataagcgataaagatttaa	Protospacer
 ************** ****.***** * *

18. spacer 1.7|800119|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to AP013455 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C40) position: , mismatch: 5, identity: 0.833

cgaaaggtactataaccgatgaagatatta-	CRISPR spacer
ttaaaggcactataagcgatgaaga-attag	Protospacer
. *****.******* ********* ****

19. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MK448665 (Streptococcus phage Javan1, complete genome) position: , mismatch: 6, identity: 0.8

aagcggaacagatgacaatatatgattttt	CRISPR spacer
agatagagcagatgacaatctatgattttt	Protospacer
*....**.*********** **********

20. spacer 1.11|800383|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 6, identity: 0.8

caagtcttgcaacaacaagtatccactaca----	CRISPR spacer
caagacttgcaacaacaagt----actagattat	Protospacer
**** ***************    **** *

21. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta----	CRISPR spacer
ttagtattaaatttaatatcaa----ttgaaaga	Protospacer
************ *********    ** *

22. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta----	CRISPR spacer
ttagtattaaatttaatatcaa----ttgaaaga	Protospacer
************ *********    ** *

23. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta	CRISPR spacer
tttaatttaaatataatatcaccaacttta	Protospacer
** .  *************** ** *****

24. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to AP014355 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

----ttagtattaaatataatatcaacaccttta	CRISPR spacer
aattttggt----aagataatatcaacaccttta	Protospacer
    **.**    ** ******************

25. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.767

aagcggaacagatgacaatatatgattttt	CRISPR spacer
aagcggaacagatgaaactatatcagatcg	Protospacer
*************** * ***** *  *.

26. spacer 1.3|799855|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to JF713456 (Vibrio phage 1, complete genome) position: , mismatch: 7, identity: 0.767

tcctttttgagtaaaagctattgtctcatt	CRISPR spacer
gcctctttgagtaaaagcttttgtctgtga	Protospacer
 ***.************** ******

27. spacer 1.4|799921|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_028666 (Streptococcus phage Str-PAP-1, complete genome) position: , mismatch: 7, identity: 0.767

tatacgactataaacagttgccagcttcat	CRISPR spacer
tatacgactatagacagttaccagcgaatc	Protospacer
************.******.*****    .

28. spacer 1.8|800185|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to AP014441 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S33-C93, *** SEQUENCING IN PROGRESS ***, 11 ordered pieces) position: , mismatch: 7, identity: 0.767

acaattattttatgtcagatattgatgaat	CRISPR spacer
aatattaatttatgtcagttattgatagag	Protospacer
*  **** ********** *******..*

29. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045792 (Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

30. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023547 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

31. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040242 (Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

32. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_022656 (Campylobacter coli 15-537360 plasmid pCC42yr, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

33. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to CP013736 (Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

34. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017867 (Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

35. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017880 (Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

36. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017874 (Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

37. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH634990 (Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

38. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028188 (Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

39. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatc-aacaccttta	CRISPR spacer
atagtattaaatataatattaaatataatt-	Protospacer
 ******************. **.*.  **

40. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MN882552 (Butyrivibrio virus Bo-Finn, complete genome) position: , mismatch: 8, identity: 0.733

aagcggaacagatgacaatatatgattttt	CRISPR spacer
tagcggaacagatgacaaaataacaagcct	Protospacer
 ***************** ***  *  ..*

41. spacer 1.1|799723|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MN693509 (Marine virus AFVG_25M367, complete genome) position: , mismatch: 8, identity: 0.733

aagcggaacagatgacaatatatgattttt	CRISPR spacer
aaatatctgagatgacaataaatgattttt	Protospacer
**...    *********** *********

42. spacer 1.5|799987|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 8, identity: 0.733

tatggaaaatgttgacttccacggtaaatc	CRISPR spacer
agctgaaaatgttgctttccacggtaacac	Protospacer
 .. ********** .***********  *

43. spacer 1.5|799987|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 8, identity: 0.733

tatggaaaatgttgacttccacggtaaatc	CRISPR spacer
agctgaaaatgttgctttccacggtaacac	Protospacer
 .. ********** .***********  *

44. spacer 1.5|799987|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 8, identity: 0.733

tatggaaaatgttgacttccacggtaaatc	CRISPR spacer
agctgaaaatgttgctttccacggtaacac	Protospacer
 .. ********** .***********  *

45. spacer 1.5|799987|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 8, identity: 0.733

tatggaaaatgttgacttccacggtaaatc	CRISPR spacer
agctgaaaatgttgctttccacggtaacac	Protospacer
 .. ********** .***********  *

46. spacer 1.6|800053|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021332 (Maritalea myrionectae strain HL2708#5 plasmid pHL2708Y3, complete sequence) position: , mismatch: 8, identity: 0.733

tagatccccgcatttttgacgaaaaagctc	CRISPR spacer
atgatccccgcattgttgaccaaaatgtcg	Protospacer
  ************ ***** **** *..

47. spacer 1.7|800119|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to KT381880 (Citrobacter phage Margaery, complete genome) position: , mismatch: 8, identity: 0.733

cgaaaggtactataaccgatgaagatatta	CRISPR spacer
tgaaaggtactatcagcgatgaagaacagc	Protospacer
.************ * *********

48. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.733

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagaattaaatataatatcaacaaccaac	Protospacer
  ** ******************* *.

49. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to MN693959 (Marine virus AFVG_250M1110, complete genome) position: , mismatch: 8, identity: 0.733

ttagtattaaatataatatcaacaccttta	CRISPR spacer
gacatattatatataatatcaaaacctaaa	Protospacer
   .***** ************ ****  *

50. spacer 1.3|799855|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134422 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 13) position: , mismatch: 9, identity: 0.7

tcctttttgagtaaaagctattgtctcatt	CRISPR spacer
aattttttgagtaaatgctattatctgcgg	Protospacer
  .************ ******.***

51. spacer 1.8|800185|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017919 (Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ5 DNA, complete sequence, phylotype ProJPt-1) position: , mismatch: 9, identity: 0.7

acaattattttatgtcagatattgatgaat	CRISPR spacer
ttcggatttttatgtcagatagttatgaat	Protospacer
 . .   ************** * ******

52. spacer 1.13|800515|30|NZ_CP022392|PILER-CR,CRISPRCasFinder,CRT matches to NC_010183 (Bacillus mycoides KBAB4 plasmid pBWB404, complete sequence) position: , mismatch: 9, identity: 0.7

ttagtattaaatataatatcaacaccttta	CRISPR spacer
gggaaattaaaaataatatcgacaccttag	Protospacer
  .. ****** ********.******* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4433 : 65669

Bacillus_phage(28.57%)

transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003100548.1\|4433_5003_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_016355731.1\|5005_8506_+	transcription-repair coupling factor	A0A068EU29	Bacillus_phage	1.2e-05	34.8
WP_003100552.1\|8468_9980_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_003100554.1\|10008_10281_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_003100556.1\|10267_10639_+	septum formation initiator family protein	NA	NA	NA	NA
WP_016355733.1\|10639_10756_+	hypothetical protein	NA	NA	NA	NA
WP_003100558.1\|10775_12062_+	serine hydrolase	NA	NA	NA	NA
WP_071794715.1\|12058_13342_+\|tRNA	tRNA lysidine(34) synthetase TilS	R4TVK3	Phaeocystis_globosa_virus	3.7e-13	25.0
WP_003100560.1\|13346_13889_+	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	9.1e-06	25.5
WP_003100561.1\|13910_15878_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	H8ZJI5	Ostreococcus_tauri_virus	2.3e-107	48.6
WP_089180041.1\|18121_19227_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_003100568.1\|20246_21638_+	amino acid permease	NA	NA	NA	NA
WP_003100570.1\|21816_22110_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_003100572.1\|22142_22418_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.6e-06	41.8
WP_003099060.1\|22542_23718_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_089180042.1\|23807_24912_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.3e-71	49.3
WP_119773870.1\|24900_25509_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	3.8e-37	47.0
WP_003098561.1\|32827_33643_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003098563.1\|33642_34140_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_016355737.1\|34238_35453_+	CHAP domain-containing protein	NA	NA	NA	NA
WP_003098567.1\|35722_36688_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	8.2e-42	35.8
WP_003098568.1\|36829_38008_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003098570.1\|37997_38765_+	DNA repair protein RecO	NA	NA	NA	NA
WP_003098571.1\|38888_39884_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_003098573.1\|39889_40126_+	acyl carrier protein	NA	NA	NA	NA
WP_003098576.1\|40330_41062_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003098577.1\|41079_42255_+	SIS domain-containing protein	NA	NA	NA	NA
WP_016355738.1\|42265_43246_+	tagatose-bisphosphate aldolase	NA	NA	NA	NA
WP_003098581.1\|43286_44006_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003098584.1\|45947_46433_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003098588.1\|46478_47360_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_003098592.1\|47346_48156_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_003098595.1\|48157_48562_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003098599.1\|48804_49941_-	CHAP domain-containing protein	F8HGP2	Streptococcus_phage	4.1e-08	30.5
WP_003098600.1\|50390_51056_-	hypothetical protein	NA	NA	NA	NA
WP_003098601.1\|51366_51591_+	hypothetical protein	NA	NA	NA	NA
WP_016355740.1\|51784_53077_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.1e-17	32.7
WP_016355741.1\|53176_54079_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003098617.1\|54296_55301_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	8.1e-08	33.1
WP_003098620.1\|55553_56003_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_003098623.1\|55999_56413_+	membrane protein	NA	NA	NA	NA
WP_003098625.1\|56409_58188_+	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	6.0e-22	25.6
WP_003098627.1\|58346_60995_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_155115666.1\|61061_61205_+	hypothetical protein	NA	NA	NA	NA
WP_003098628.1\|61326_62811_+	threonine synthase	NA	NA	NA	NA
WP_003098630.1\|62853_64155_+	MATE family efflux transporter	NA	NA	NA	NA
WP_071794717.1\|64502_65669_-\|transposase	IS30-like element ISSag9 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

175663 : 234987

Bacillus_phage(27.27%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089180045.1\|175663_176775_-\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_003098952.1\|177604_180097_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_003098954.1\|180409_180913_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_003098956.1\|181062_181989_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003098957.1\|182197_182839_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003098958.1\|182850_183858_-	sugar kinase	NA	NA	NA	NA
WP_003098959.1\|183880_184522_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_003098960.1\|184535_185348_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_003098962.1\|185677_186112_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_016355781.1\|186111_187311_+	glucuronyl hydrolase	NA	NA	NA	NA
WP_003098964.1\|187347_187839_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003098966.1\|187859_188726_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_003098967.1\|188712_189528_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_016355782.1\|189598_191515_+	alginate lyase family protein	NA	NA	NA	NA
WP_003098969.1\|191610_192612_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003098971.1\|192671_196175_-	polysaccharide lyase 8 family protein	NA	NA	NA	NA
WP_003098973.1\|196440_197316_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.7e-18	28.8
WP_003098975.1\|197315_198050_+	ABC transporter permease	NA	NA	NA	NA
WP_003098977.1\|198046_199135_+	sensor histidine kinase	NA	NA	NA	NA
WP_003098979.1\|199136_199733_+	response regulator transcription factor	NA	NA	NA	NA
WP_003098980.1\|199811_199994_+	hypothetical protein	NA	NA	NA	NA
WP_017794719.1\|200222_201098_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003098984.1\|201534_201810_+	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
WP_003098986.1\|201864_202146_+	hypothetical protein	NA	NA	NA	NA
WP_003098987.1\|202164_202464_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003098989.1\|202475_202793_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003098990.1\|202808_204164_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_003098992.1\|204218_206765_+\|holin	choline trimethylamine-lyase	Q70BG9	Salmonella_phage	2.3e-06	38.7
WP_003098993.1\|206830_207787_+\|holin	choline TMA-lyase-activating enzyme	A0A2P0VNQ0	Tetraselmis_virus	1.1e-14	28.1
WP_003098995.1\|207803_208157_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003098998.1\|208153_208600_+	hypothetical protein	NA	NA	NA	NA
WP_003099001.1\|208596_209727_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_003099006.1\|209792_210431_+	hypothetical protein	NA	NA	NA	NA
WP_003099009.1\|210423_211263_+	ethanolamine utilization protein EutJ	NA	NA	NA	NA
WP_003099011.1\|211274_211571_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_003099012.1\|211993_212626_+	DUF861 domain-containing protein	NA	NA	NA	NA
WP_003099015.1\|212641_213217_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003099017.1\|213248_214910_+	acetaldehyde dehydrogenase (acetylating)	A0A1X9I5D4	Streptococcus_phage	5.6e-06	21.8
WP_003099019.1\|214920_215619_+	phosphate propanoyltransferase	NA	NA	NA	NA
WP_003099021.1\|215631_215907_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003099022.1\|215937_216213_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003099024.1\|216242_216518_+	BMC domain-containing protein	NA	NA	NA	NA
WP_003099026.1\|216640_220276_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_003099028.1\|220295_221330_+	DMT family transporter	NA	NA	NA	NA
WP_003099030.1\|221541_222612_+	hypothetical protein	NA	NA	NA	NA
WP_003099032.1\|222745_223831_+	ABC transporter permease	NA	NA	NA	NA
WP_003099034.1\|223832_224510_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-36	37.4
WP_003099036.1\|224552_225242_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-37	40.6
WP_003099038.1\|225228_226290_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.1e-34	31.7
WP_003099040.1\|226444_227041_-	phosphoribulokinase	NA	NA	NA	NA
WP_003099042.1\|227267_228137_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_003099043.1\|228211_229405_+	MFS transporter	NA	NA	NA	NA
WP_003099045.1\|229539_229995_+	hypothetical protein	NA	NA	NA	NA
WP_003099047.1\|230283_231645_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	3.3e-214	75.1
WP_003099048.1\|231758_233201_-	SidA/IucD/PvdA family monooxygenase	NA	NA	NA	NA
WP_003099050.1\|233282_233789_-	DNA topology modulation protein	A0A097BYE2	Leuconostoc_phage	4.6e-28	38.1
WP_089180054.1\|233881_234987_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	6.9e-69	48.9

DBSCAN-SWA_3

377059 : 449871

unidentified_phage(11.76%)

transposase,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003100813.1\|377059_377806_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_003100814.1\|377798_378566_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003100815.1\|378549_379023_+	membrane protein	NA	NA	NA	NA
WP_003100817.1\|379036_379600_+	TIGR01440 family protein	NA	NA	NA	NA
WP_003100819.1\|379765_380617_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_003100820.1\|380997_382281_+	trigger factor	NA	NA	NA	NA
WP_003100822.1\|382346_383015_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003098714.1\|383044_383998_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003100823.1\|384204_384774_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003100826.1\|384993_386601_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.1e-135	45.0
WP_003100828.1\|386666_388418_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.1e-65	29.6
WP_003100829.1\|388417_389149_+	response regulator	NA	NA	NA	NA
WP_003100830.1\|389283_389736_+\|holin	antiholin-like murein hydrolase modulator LrgA	NA	NA	NA	NA
WP_003100832.1\|389751_390462_+\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_003100833.1\|390525_391452_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003100835.1\|391783_392665_+	fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_003098612.1\|393125_394079_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003100836.1\|394242_394431_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_003100837.1\|394572_394938_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003100838.1\|394937_396602_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_003100840.1\|396939_397830_+	SPFH domain-containing protein	A0A1V0SL90	Klosneuvirus	2.7e-31	32.1
WP_016355825.1\|397898_398015_-	hypothetical protein	NA	NA	NA	NA
WP_003100842.1\|398212_398953_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.8e-26	39.1
WP_003100845.1\|398945_400514_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_003100846.1\|400996_401836_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_003100848.1\|401955_402717_+	adaptor protein MecA	NA	NA	NA	NA
WP_016355826.1\|402719_403880_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_003100850.1\|404003_404774_+	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	8.6e-10	27.5
WP_003100851.1\|404844_406107_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_003100852.1\|406125_407352_+	cysteine desulfurase	Q2XUY6	environmental_halophage	1.8e-105	44.3
WP_003100854.1\|407338_407776_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_003100855.1\|407806_409225_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_003100857.1\|409366_410554_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.9e-11	25.6
WP_089180060.1\|410669_411780_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	8.0e-49	41.1
WP_089180121.1\|411872_413081_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_003100860.1\|413149_414388_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_003100861.1\|414704_416684_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003100862.1\|416748_418248_+	ABC transporter permease	NA	NA	NA	NA
WP_003100863.1\|418247_419174_+	ABC transporter permease	NA	NA	NA	NA
WP_031239151.1\|419179_420250_+	ABC transporter ATP-binding protein	A0A2R8FFL6	Cedratvirus	4.7e-06	24.7
WP_003100865.1\|420242_421166_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-21	34.1
WP_003100867.1\|429208_429523_-	DUF960 domain-containing protein	NA	NA	NA	NA
WP_016355831.1\|429580_430114_-	DUF402 domain-containing protein	NA	NA	NA	NA
WP_003100869.1\|430195_430972_-	recombination regulator RecX	NA	NA	NA	NA
WP_003100871.1\|431057_432413_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	9.7e-73	33.1
WP_003100873.1\|432531_433407_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	5.2e-11	37.4
WP_016355832.1\|433432_434413_+	sugar transferase	NA	NA	NA	NA
WP_003100875.1\|434421_436149_+	SP_1767 family glycosyltransferase	A0A0F7L2F7	uncultured_marine_virus	2.0e-06	31.2
WP_003100876.1\|436155_437037_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	8.9e-11	42.4
WP_003100877.1\|437127_438333_+	family 8 glycosyl transferase	NA	NA	NA	NA
WP_089180061.1\|443500_448099_+	accessory Sec-dependent serine-rich glycoprotein adhesin	NA	NA	NA	NA
WP_016355840.1\|448176_449871_-\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.7e-103	41.0

DBSCAN-SWA_4

607891 : 682251

Enterococcus_phage(21.43%)

transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089180067.1\|607891_608920_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003101128.1\|609109_609814_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_003101129.1\|609897_610599_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_003101130.1\|610673_611825_+	MFS transporter	NA	NA	NA	NA
WP_003101132.1\|611897_612110_+	competence protein CoiA	NA	NA	NA	NA
WP_089180059.1\|612119_613225_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
WP_003100090.1\|613366_614056_+	competence protein CoiA	NA	NA	NA	NA
WP_003100091.1\|614081_615884_+	oligoendopeptidase F	NA	NA	NA	NA
WP_003100092.1\|615885_616539_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003100094.1\|616574_617219_+	HAD family hydrolase	NA	NA	NA	NA
WP_003100096.1\|617389_618097_+	O-methyltransferase	NA	NA	NA	NA
WP_003100098.1\|618160_619102_+	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_003100100.1\|619399_622018_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.3e-61	33.6
WP_003100102.1\|622145_622790_-	hypothetical protein	NA	NA	NA	NA
WP_003100103.1\|622887_623580_-	hypothetical protein	NA	NA	NA	NA
WP_003100105.1\|623970_624753_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_003100106.1\|624769_625945_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003100110.1\|627229_628480_-	chloride channel protein	NA	NA	NA	NA
WP_003100111.1\|628573_629533_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	8.2e-127	69.9
WP_003100112.1\|629996_632156_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.7e-258	61.6
WP_003100113.1\|632185_632404_-	glutaredoxin-like protein NrdH	A0A249XUR7	Enterococcus_phage	5.8e-12	42.7
WP_000146945.1\|632927_633191_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003100126.1\|633195_634929_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_031238984.1\|635065_636493_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003100130.1\|636639_637920_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003100131.1\|638109_639198_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.6e-31	32.9
WP_003100132.1\|639350_639977_+	uridine kinase	A0A1V0SAA3	Catovirus	1.0e-32	37.7
WP_003100133.1\|639985_640264_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_003100134.1\|640362_640860_+	GAF domain-containing protein	NA	NA	NA	NA
WP_003100135.1\|640859_642533_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	5.1e-47	41.6
WP_003100136.1\|642583_642787_+	DUF3272 family protein	NA	NA	NA	NA
WP_003100137.1\|642767_643730_-	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA	NA	NA	NA
WP_003100140.1\|646528_647716_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.6e-140	66.8
WP_003100141.1\|647898_649158_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003100142.1\|649407_650952_+	MFS transporter	NA	NA	NA	NA
WP_089180068.1\|651010_652036_+	sugar kinase	NA	NA	NA	NA
WP_003100145.1\|652142_652826_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_003100147.1\|652936_653554_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003100148.1\|653564_654965_+	glucuronate isomerase	NA	NA	NA	NA
WP_003100150.1\|654987_656034_+	mannonate dehydratase	NA	NA	NA	NA
WP_003100151.1\|656084_656924_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_016355878.1\|656990_658520_+	hypothetical protein	NA	NA	NA	NA
WP_003100157.1\|658643_659450_+	HAD family hydrolase	NA	NA	NA	NA
WP_003100159.1\|659480_661271_+	beta-hexosamidase	NA	NA	NA	NA
WP_003100161.1\|661423_661975_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003100163.1\|661967_663257_+	CBS domain-containing protein	NA	NA	NA	NA
WP_003100165.1\|663283_664144_+	methionyl aminopeptidase	NA	NA	NA	NA
WP_003100167.1\|664145_665099_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_003100169.1\|665169_666453_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003100171.1\|666445_666964_+	shikimate kinase	NA	NA	NA	NA
WP_003100173.1\|667091_668528_+	LCP family protein	NA	NA	NA	NA
WP_003100174.1\|668609_669968_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	3.8e-194	74.9
WP_003100176.1\|670237_671116_+	nucleotidyltransferase	NA	NA	NA	NA
WP_003100177.1\|671093_671666_+	SLATT domain-containing protein	NA	NA	NA	NA
WP_089180059.1\|673449_674555_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
WP_089180045.1\|675556_676668_-\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_003099066.1\|677396_678572_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	5.9e-26	29.6
WP_003099068.1\|679173_679479_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_003099069.1\|679640_681620_+	DUF1430 domain-containing protein	NA	NA	NA	NA
WP_003099070.1\|681621_682251_+\|bacteriocin	putative bacteriocin export ABC transporter	G9BWD6	Planktothrix_phage	5.8e-20	33.3

DBSCAN-SWA_5

905871 : 969230

Staphylococcus_phage(19.05%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003099499.1\|905871_906675_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.6e-17	30.0
WP_003099501.1\|906686_907445_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-18	32.9
WP_003099503.1\|907499_908153_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_003099506.1\|908214_910752_+	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	1.3e-67	24.4
WP_003099507.1\|910872_911547_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.1e-27	32.4
WP_003099509.1\|911539_912850_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	1.4e-12	28.6
WP_003099510.1\|913021_913255_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_089180078.1\|913323_914244_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	5.3e-30	33.6
WP_003099060.1\|914403_915579_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_003099513.1\|915826_916426_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_089180079.1\|916412_917690_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	3.1e-113	52.2
WP_003099517.1\|917701_918364_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_071794726.1\|918269_918740_+	cytidine deaminase	NA	NA	NA	NA
WP_003099521.1\|918826_919882_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003099522.1\|920014_921547_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-21	33.8
WP_003099523.1\|921539_922604_+	ABC transporter permease	NA	NA	NA	NA
WP_003099524.1\|922605_923562_+	ABC transporter permease	NA	NA	NA	NA
WP_016355995.1\|923745_927114_+	S8 family serine peptidase	NA	NA	NA	NA
WP_071127661.1\|927115_927352_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_003099526.1\|927528_929244_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.4e-270	83.0
WP_003099527.1\|929390_929960_-	ECF transporter S component	NA	NA	NA	NA
WP_003099529.1\|930026_930572_-	phosphopantothenoylcysteine decarboxylase	A0A1V0S7W6	Shearwaterpox_virus	2.0e-21	32.8
WP_003099530.1\|930564_931260_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
WP_003099531.1\|931429_932254_+	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_003099533.1\|932367_934038_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_003099534.1\|934156_935746_+	cardiolipin synthase	NA	NA	NA	NA
WP_016355996.1\|936004_937084_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_016355997.1\|937119_938049_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_017794672.1\|938156_938495_+	hypothetical protein	A0A248SK58	Salicola_phage	3.7e-05	34.5
WP_003099541.1\|938517_939780_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	2.3e-100	47.4
WP_003099543.1\|939959_941504_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.2e-49	29.3
WP_003099545.1\|941621_941798_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_003099551.1\|942364_942709_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_003099552.1\|942714_944184_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.1e-210	74.7
WP_003099553.1\|944454_945357_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
WP_003099555.1\|945432_946083_-	hemolysin III family protein	NA	NA	NA	NA
WP_003099557.1\|946079_946529_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_003099561.1\|946877_948164_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003099563.1\|948160_949000_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003099566.1\|949469_950324_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003099568.1\|950307_951093_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	4.4e-25	38.6
WP_003099570.1\|951105_951654_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_003099573.1\|951719_952565_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003099575.1\|952661_954797_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	6.4e-103	36.5
WP_003099578.1\|954890_955775_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_089180080.1\|955940_956999_+	PTS transporter subunit IIC	NA	NA	NA	NA
WP_003099592.1\|957017_958010_+	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	2.3e-39	33.4
WP_003099599.1\|958115_958781_+	DNA-binding protein	NA	NA	NA	NA
WP_003099601.1\|958780_959494_+	DUF3307 domain-containing protein	NA	NA	NA	NA
WP_003099060.1\|959664_960840_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_003099608.1\|960973_961726_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-30	36.3
WP_003099611.1\|961727_963683_+	ABC transporter permease	NA	NA	NA	NA
WP_003099615.1\|963725_964391_+	response regulator transcription factor	NA	NA	NA	NA
WP_003099619.1\|965335_965671_+	hypothetical protein	NA	NA	NA	NA
WP_003099620.1\|965759_966830_-	tyrosine recombinase XerS	NA	NA	NA	NA
WP_003099621.1\|967043_967667_-	hypothetical protein	NA	NA	NA	NA
WP_003099060.1\|968054_969230_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1

DBSCAN-SWA_6

1010414 : 1132326

115

Bacillus_phage(15.15%)

integrase,protease,tRNA,transposase

attL 1009429:1009450|attR 1058311:1058332

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1009429:1009450	attL	NA	NA	NA	NA
WP_089180041.1\|1010414_1011519_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
WP_003099686.1\|1012296_1012482_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_016356012.1\|1012553_1013465_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_142924914.1\|1013548_1013992_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0N9SIX5	Staphylococcus_phage	8.7e-39	61.6
WP_003099691.1\|1014076_1015345_-	purine permease	Q9KX94	Enterobacteria_phage	5.2e-28	28.0
WP_003099696.1\|1015344_1015926_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_003099697.1\|1016167_1017151_-	GMP reductase	G3MBI2	Bacillus_virus	5.6e-139	75.4
WP_003099699.1\|1017404_1018934_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_003099700.1\|1018926_1019655_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-27	37.7
WP_003099702.1\|1019890_1020739_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003099704.1\|1020894_1021584_+	hypothetical protein	NA	NA	NA	NA
WP_003099705.1\|1021771_1022530_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_089180084.1\|1022604_1023597_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_016356014.1\|1023613_1024507_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003099713.1\|1024503_1025340_-	NAD kinase	NA	NA	NA	NA
WP_003099716.1\|1025314_1025986_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_003099718.1\|1026079_1026652_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_003099722.1\|1026765_1027737_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	4.2e-38	35.5
WP_003099723.1\|1027740_1028856_+	cysteine desulfurase	H7BUW1	unidentified_phage	2.3e-27	35.8
WP_003099725.1\|1028857_1029205_+	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_003099727.1\|1029273_1029486_+	DUF4649 family protein	NA	NA	NA	NA
WP_003099729.1\|1029660_1030305_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_089180085.1\|1030313_1031015_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_016356016.1\|1031011_1031692_-	JAB domain-containing protein	NA	NA	NA	NA
WP_003099737.1\|1031734_1032859_-	AI-2E family transporter	NA	NA	NA	NA
WP_003099738.1\|1032961_1034401_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_003099739.1\|1034539_1035139_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_003099740.1\|1035250_1035868_-	lipase/acylhydrolase	NA	NA	NA	NA
WP_003099741.1\|1035948_1037436_-	family 1 glycosylhydrolase	NA	NA	NA	NA
WP_003099742.1\|1037694_1038627_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003099743.1\|1038718_1040638_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_003099745.1\|1040924_1041752_-	PRD domain-containing protein	NA	NA	NA	NA
WP_003099747.1\|1041831_1043379_-	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_003099748.1\|1043596_1048141_-	S8 family serine peptidase	NA	NA	NA	NA
WP_016356018.1\|1048334_1049495_-	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_003099752.1\|1049517_1050825_-	2-hydroxycarboxylate transporter family protein	A0A140XAH4	Dickeya_phage	3.0e-18	56.1
WP_003099759.1\|1050985_1052506_+	sensor histidine kinase	NA	NA	NA	NA
WP_003099762.1\|1052507_1053179_+	response regulator	NA	NA	NA	NA
WP_003099766.1\|1053470_1054544_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003099768.1\|1054536_1055313_-	ABC transporter permease	NA	NA	NA	NA
WP_016356019.1\|1055309_1056104_-	ABC transporter permease	Q6GZ02	Mycoplasma_phage	4.3e-12	25.5
WP_003099772.1\|1056087_1057242_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.6e-36	40.3
WP_003099774.1\|1057276_1058170_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_003099776.1\|1058424_1059591_+\|transposase	IS30 family transposase	NA	NA	NA	NA
1058311:1058332	attR	NA	NA	NA	NA
WP_003099778.1\|1059842_1060334_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003099779.1\|1060330_1060690_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003099781.1\|1060696_1061497_-	dihydropteroate synthase	NA	NA	NA	NA
WP_003099782.1\|1061506_1062070_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.0e-47	51.6
WP_003099784.1\|1062098_1063358_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_003099786.1\|1063441_1064302_-	homoserine kinase	NA	NA	NA	NA
WP_016356020.1\|1064303_1065590_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_003099793.1\|1065774_1066695_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_003099056.1\|1066954_1068130_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.6e-26	29.6
WP_089180059.1\|1068474_1069580_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
WP_003099798.1\|1069647_1070088_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	5.4e-17	36.8
WP_003099800.1\|1070310_1070676_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_003099802.1\|1070739_1071240_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_003098612.1\|1071503_1072457_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003099809.1\|1074016_1074730_-	hypothetical protein	NA	NA	NA	NA
WP_003099810.1\|1074837_1075437_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_003099812.1\|1075446_1076676_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	9.5e-136	59.9
WP_003099815.1\|1076708_1076879_-	hypothetical protein	NA	NA	NA	NA
WP_003099817.1\|1076900_1077398_-	dihydrofolate reductase	A0A1L7N103	Ralstonia_phage	6.8e-16	36.7
WP_017794807.1\|1077476_1078316_-	thymidylate synthase	U5J9N5	Bacillus_phage	2.1e-81	53.2
WP_003099823.1\|1078511_1079684_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_071794728.1\|1079664_1080951_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003099830.1\|1080974_1081970_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_003099834.1\|1081950_1082970_-	phosphomevalonate kinase	NA	NA	NA	NA
WP_003099837.1\|1082962_1083907_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_003099844.1\|1083882_1084767_-	mevalonate kinase	NA	NA	NA	NA
WP_003099847.1\|1084897_1086640_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	3.1e-23	24.6
WP_003099849.1\|1086641_1088363_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-39	24.7
WP_003099850.1\|1088938_1090969_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003099851.1\|1091004_1091415_-	peptide deformylase	NA	NA	NA	NA
WP_003099852.1\|1091494_1092844_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_003099853.1\|1092977_1094744_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.0e-51	29.9
WP_003099854.1\|1094743_1096486_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-36	24.4
WP_003099856.1\|1096587_1097067_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003099861.1\|1097068_1098955_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	8.2e-62	30.5
WP_003099863.1\|1098951_1100160_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.1e-39	43.6
WP_003099866.1\|1100156_1100924_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_016356025.1\|1100940_1101792_-	DegV family protein	NA	NA	NA	NA
WP_003099871.1\|1101791_1102172_-	DUF1149 family protein	NA	NA	NA	NA
WP_003099873.1\|1102244_1102766_-	hypothetical protein	NA	NA	NA	NA
WP_003099875.1\|1102962_1103436_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_064537858.1\|1103574_1104255_-	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	1.0e-09	38.4
WP_016356029.1\|1104464_1105079_-	glycoside hydrolase family 73 protein	NA	NA	NA	NA
WP_003099880.1\|1105167_1107120_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_003099882.1\|1107116_1108028_-	1-phosphofructokinase	NA	NA	NA	NA
WP_003099883.1\|1108024_1108738_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_003099884.1\|1108899_1109823_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_089180086.1\|1109841_1110855_-	PTS transporter subunit IIC	NA	NA	NA	NA
WP_003099886.1\|1110990_1111989_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.2e-26	51.6
WP_003099887.1\|1111981_1112725_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003099888.1\|1112711_1113230_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003099889.1\|1113484_1115014_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003082623.1\|1115185_1115425_-	KH domain-containing protein	NA	NA	NA	NA
WP_003099891.1\|1115434_1115707_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_003099892.1\|1115977_1116586_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.8e-40	47.9
WP_017794652.1\|1116578_1117802_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_016356034.1\|1117813_1118527_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	41.7
WP_016356035.1\|1118545_1119790_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003099896.1\|1120056_1121316_-	uracil transporter	Q9KX94	Enterobacteria_phage	3.9e-60	37.1
WP_016356036.1\|1121330_1121852_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_003099901.1\|1122055_1122955_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003099904.1\|1122955_1123402_-	signal peptidase II	NA	NA	NA	NA
WP_003099906.1\|1123398_1124313_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.8e-06	28.5
WP_003099908.1\|1124457_1124751_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_016356038.1\|1124778_1125102_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003099910.1\|1125109_1125424_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_003098714.1\|1125735_1126689_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
WP_003099911.1\|1126820_1127732_+	ribonucleoside hydrolase	NA	NA	NA	NA
WP_089180045.1\|1128057_1129168_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_016356042.1\|1129833_1131030_-	CapA family protein	A0A2H4J434	uncultured_Caudovirales_phage	3.6e-39	35.1
WP_003099916.1\|1131111_1132326_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA

DBSCAN-SWA_7

1359855 : 1395956

Staphylococcus_phage(42.86%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089180045.1\|1359855_1360966_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
WP_003099060.1\|1361130_1362306_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_121795792.1\|1362330_1362876_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.2e-12	32.0
WP_003101367.1\|1363208_1363994_-	multidrug ABC transporter permease	NA	NA	NA	NA
WP_003101368.1\|1363995_1364814_-	antibiotic ABC transporter permease	NA	NA	NA	NA
WP_003101369.1\|1364815_1365808_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.0e-15	27.7
WP_003101370.1\|1366083_1366548_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.4e-17	36.8
WP_003101371.1\|1366740_1368681_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.5e-119	38.3
WP_003101376.1\|1369065_1370403_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003101378.1\|1370404_1371403_-	glycosyltransferase	NA	NA	NA	NA
WP_003101380.1\|1371531_1372533_-	catabolite control protein A	NA	NA	NA	NA
WP_003101382.1\|1372704_1373790_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_003101385.1\|1373952_1374294_-	hypothetical protein	NA	NA	NA	NA
WP_003101387.1\|1374483_1375146_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003101389.1\|1375156_1375537_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_003101392.1\|1375663_1376590_+	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	7.8e-82	49.8
WP_016356084.1\|1376733_1377417_+	DUF969 domain-containing protein	NA	NA	NA	NA
WP_003101395.1\|1377416_1378343_+	DUF979 domain-containing protein	NA	NA	NA	NA
WP_003099060.1\|1378424_1379600_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_003101396.1\|1379726_1380374_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_003101397.1\|1380524_1381241_-	glutamine cyclotransferase	NA	NA	NA	NA
WP_003101398.1\|1381250_1381718_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.1e-39	56.3
WP_003101399.1\|1381717_1384033_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.1e-96	40.8
WP_003101400.1\|1384119_1384356_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_016356085.1\|1384401_1384548_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_003101401.1\|1384789_1386271_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	2.0e-71	40.9
WP_003101409.1\|1386370_1387009_-	membrane protein	NA	NA	NA	NA
WP_003101412.1\|1387016_1387628_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_003101415.1\|1387585_1388425_-	DNA-formamidopyrimidine glycosylase	G3MA33	Bacillus_virus	2.0e-28	33.6
WP_003101416.1\|1388617_1389457_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_142924915.1\|1389546_1389615_+	SHP2/SHP3 family peptide pheromone	NA	NA	NA	NA
WP_003101417.1\|1389733_1391356_+	transglutaminase	NA	NA	NA	NA
WP_003099060.1\|1392498_1393674_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
WP_089180094.1\|1394120_1394729_-	hypothetical protein	NA	NA	NA	NA
WP_003099060.1\|1394780_1395956_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1

DBSCAN-SWA_8

1442163 : 1457973

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003101503.1\|1442163_1442991_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.9
WP_003101504.1\|1442992_1443652_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_003101505.1\|1443799_1444174_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
WP_003101507.1\|1444198_1444615_+	VOC family protein	NA	NA	NA	NA
WP_003101510.1\|1444765_1445668_+	cation transporter	M1Q1N9	Streptococcus_phage	4.2e-72	49.3
WP_003101511.1\|1445793_1447476_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.7e-103	41.0
WP_003101512.1\|1447467_1447824_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.0e-37	66.1
WP_003101518.1\|1447820_1448315_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.9e-42	53.5
WP_003101520.1\|1448384_1449560_-	3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.0e-166	75.1
WP_003101521.1\|1449602_1450151_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.1e-50	59.6
WP_031239202.1\|1450174_1451266_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.0e-162	76.8
WP_003101523.1\|1451385_1452018_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003101524.1\|1452197_1453064_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.5e-116	72.5
WP_003101525.1\|1453068_1453401_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.3e-28	56.5
WP_016356097.1\|1453390_1454191_-	PSP1 C-terminal domain protein	NA	NA	NA	NA
WP_003101528.1\|1454187_1455063_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.3e-73	49.7
WP_003101530.1\|1455080_1455713_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-70	63.6
WP_003101532.1\|1455793_1456456_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	5.2e-64	59.4
WP_003101534.1\|1456498_1457209_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-18	28.1
WP_003101535.1\|1457208_1457973_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-16	27.0

DBSCAN-SWA_9

1961609 : 2073316

116

Streptococcus_phage(72.13%)

integrase,head,capsid,transposase,protease,tRNA,tail,portal,terminase,holin

attL 1991690:1991715|attR 2023206:2023231

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003100327.1\|1961609_1964111_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.4
WP_003100329.1\|1964249_1964939_-	hypothetical protein	NA	NA	NA	NA
WP_089180112.1\|1965039_1966449_-	dipeptidase PepV	NA	NA	NA	NA
WP_003100332.1\|1966561_1967701_-	PLP-dependent transferase	NA	NA	NA	NA
WP_003100334.1\|1967703_1968084_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
WP_003100336.1\|1968117_1969509_-	APC family permease	NA	NA	NA	NA
WP_003100337.1\|1969524_1970304_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_089180113.1\|1970516_1971605_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_003100341.1\|1971843_1972386_-	transcription termination/antitermination protein NusG	NA	NA	NA	NA
WP_003100345.1\|1972540_1972717_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_003100347.1\|1972728_1972881_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_003100349.1\|1972929_1975248_-	penicillin-binding protein	NA	NA	NA	NA
WP_003100351.1\|1975281_1975662_-	RidA family protein	NA	NA	NA	NA
WP_003100353.1\|1975862_1976054_+	hypothetical protein	NA	NA	NA	NA
WP_016356199.1\|1976037_1976922_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_089180114.1\|1976934_1978572_-	hypothetical protein	NA	NA	NA	NA
WP_003100362.1\|1978796_1980290_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003100367.1\|1983513_1985142_-	chaperonin GroEL	A0A219YK78	uncultured_virus	1.0e-153	55.6
WP_003100369.1\|1985173_1985464_-	co-chaperone GroES	NA	NA	NA	NA
WP_003100371.1\|1985605_1988053_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	1.8e-122	38.9
WP_003100373.1\|1988055_1988514_-	CtsR family transcriptional regulator	NA	NA	NA	NA
WP_016356203.1\|1988684_1988888_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.1e-25	86.2
WP_003100378.1\|1989171_1989438_+	hypothetical protein	NA	NA	NA	NA
WP_003100380.1\|1989441_1991505_+	sodium:proton antiporter	NA	NA	NA	NA
1991690:1991715	attL	NA	NA	NA	NA
WP_016356204.1\|1991712_1992783_-\|integrase	site-specific integrase	A0A1P8VVR7	Streptococcus_phage	1.2e-89	47.2
WP_016356205.1\|1992911_1993469_-	hypothetical protein	NA	NA	NA	NA
WP_121791665.1\|1993490_1993868_-	ImmA/IrrE family metallo-endopeptidase	A0A141DZH4	Streptococcus_phage	1.1e-39	64.5
WP_016356207.1\|1993886_1994246_-	helix-turn-helix transcriptional regulator	A0A1S5SED8	Streptococcus_phage	9.5e-44	73.9
WP_016356208.1\|1994532_1994697_+	hypothetical protein	A0A1P8VVU2	Streptococcus_phage	1.4e-15	77.8
WP_016356209.1\|1994679_1995150_-	hypothetical protein	A0A1P8VVS1	Streptococcus_phage	3.3e-60	71.2
WP_016356210.1\|1995212_1995425_+	helix-turn-helix transcriptional regulator	A0A1P8VVQ4	Streptococcus_phage	8.6e-29	92.9
WP_016356211.1\|1995424_1995766_+	hypothetical protein	A0A1P8VVU1	Streptococcus_phage	4.5e-51	93.8
WP_071126748.1\|1995808_1996093_+	DNA-binding protein	A0A1P8VVZ3	Streptococcus_phage	1.5e-44	91.5
WP_016356213.1\|1996109_1996295_+	hypothetical protein	NA	NA	NA	NA
WP_016356214.1\|1996294_1997629_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.3e-182	72.9
WP_016356215.1\|1997630_1998215_+	hypothetical protein	A0A1P8VVT8	Streptococcus_phage	1.2e-67	66.1
WP_016356216.1\|1998211_1998973_+	hypothetical protein	A0A220GFI5	Streptococcus_phage	4.4e-30	60.4
WP_016356217.1\|1998973_1999786_+	ATP-binding protein	A0A1P8VVV9	Streptococcus_phage	7.2e-116	77.9
WP_016356218.1\|1999785_2000247_+	methyltransferase domain-containing protein	A0A1S5S9R6	Streptococcus_phage	7.6e-78	86.3
WP_016356219.1\|2000256_2000502_+	hypothetical protein	A0A1P8VVT9	Streptococcus_phage	1.3e-31	84.0
WP_016356222.1\|2000790_2001018_+	hypothetical protein	J7KK64	Streptococcus_phage	4.3e-26	90.3
WP_016356223.1\|2001020_2001224_+	hypothetical protein	NA	NA	NA	NA
WP_016356224.1\|2001213_2001834_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	9.1e-18	37.6
WP_089180126.1\|2001862_2002210_+	hypothetical protein	A0A140HLR7	Bacillus_phage	1.4e-31	64.9
WP_089180115.1\|2002210_2002429_+	hypothetical protein	J7KDL2	Streptococcus_phage	1.9e-31	86.1
WP_016356226.1\|2002430_2002832_+	hypothetical protein	Q708P3	Streptococcus_phage	2.0e-42	65.6
WP_016356227.1\|2002851_2003370_+	hypothetical protein	NA	NA	NA	NA
WP_016356228.1\|2003366_2003678_+	helix-turn-helix transcriptional regulator	A0A1P8VVV5	Streptococcus_phage	1.3e-25	52.3
WP_071126743.1\|2004011_2004416_+	transcriptional regulator	A3F635	Streptococcus_phage	1.2e-18	38.8
WP_016356231.1\|2004601_2005144_+\|integrase	site-specific integrase	A0A1S5S9C2	Streptococcus_phage	1.0e-97	98.9
WP_016356232.1\|2005308_2005494_+	hypothetical protein	A0A1S5SAV8	Streptococcus_phage	2.4e-11	61.9
WP_016356233.1\|2005608_2005938_+	HNH endonuclease	C5J957	Streptococcus_phage	1.7e-47	78.1
WP_016356234.1\|2006048_2006438_+	hypothetical protein	A0A1S5S8F2	Streptococcus_phage	7.6e-55	87.3
WP_071126782.1\|2006475_2008206_+\|terminase	terminase large subunit	C5J959	Streptococcus_phage	1.6e-309	89.2
WP_016356236.1\|2008228_2009431_+\|portal	phage portal protein	C5J961	Streptococcus_phage	1.1e-184	77.8
WP_016356237.1\|2009417_2009996_+\|head,protease	HK97 family phage prohead protease	C5J962	Streptococcus_phage	8.0e-93	88.5
WP_016356238.1\|2009992_2011162_+\|capsid	phage major capsid protein	A0A141E0N4	Streptococcus_phage	9.1e-128	67.4
WP_016356239.1\|2011173_2011470_+	hypothetical protein	A0A1S5S8Q9	Streptococcus_phage	5.8e-15	58.2
WP_016356240.1\|2011472_2011751_+	hypothetical protein	A0A1S5S8H0	Streptococcus_phage	7.8e-38	81.5
WP_016356241.1\|2011740_2012040_+\|head	phage head closure protein	A0A1S5SEX5	Streptococcus_phage	9.7e-34	69.4
WP_016356242.1\|2012036_2012384_+	HK97 gp10 family phage protein	A0A1S5SEL8	Streptococcus_phage	3.0e-34	79.1
WP_016356243.1\|2012380_2012704_+	hypothetical protein	A0A1S5SEP5	Streptococcus_phage	2.7e-37	74.8
WP_016356244.1\|2012718_2013303_+\|tail	phage major tail, phi13 family protein	A0A1S5SFN4	Streptococcus_phage	2.0e-67	63.5
WP_016356245.1\|2013315_2013735_+	hypothetical protein	A0A1X9I691	Streptococcus_phage	5.2e-33	52.4
WP_016356246.1\|2014009_2016814_+\|tail	phage tail tape measure protein	Q6DMT2	Streptococcus_phage	5.2e-145	58.4
WP_016356247.1\|2016810_2017527_+	prophage protein	A0A1S5SAI1	Streptococcus_phage	1.8e-73	55.0
WP_016356248.1\|2017526_2018882_+	prophage Lp1 protein 52, endolysin	A0A1S5S9Z5	Streptococcus_phage	1.1e-124	52.0
WP_016356249.1\|2018881_2020426_+	hypothetical protein	A0A1S5SAE0	Streptococcus_phage	6.6e-17	51.1
WP_071126781.1\|2020484_2020706_+	hypothetical protein	A7J2B2	Streptococcus_phage	3.3e-15	58.9
WP_016356251.1\|2020707_2020968_+\|holin	phage holin	J7KDR1	Streptococcus_phage	1.9e-30	81.0
WP_071126739.1\|2021081_2022494_+\|holin	holin	A0A1P8VVS3	Streptococcus_phage	4.2e-204	89.8
WP_016356254.1\|2022552_2022783_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003100382.1\|2023697_2024261_+	peroxiredoxin	NA	NA	NA	NA
2023206:2023231	attR	NA	NA	NA	NA
WP_003100384.1\|2024282_2025815_+	alkyl hydroperoxide reductase subunit F	V9VEY6	Lactococcus_phage	8.8e-22	30.3
WP_003100386.1\|2026041_2026809_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_016356255.1\|2026935_2027976_+	elongation factor Ts	NA	NA	NA	NA
WP_003100390.1\|2028162_2030058_-	endopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	2.2e-75	31.2
WP_003100392.1\|2030189_2031125_-	transketolase	NA	NA	NA	NA
WP_003100394.1\|2031121_2031979_-	transketolase	A0A2K9L6P9	Tupanvirus	9.6e-26	30.8
WP_003100396.1\|2031978_2033325_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_003100398.1\|2033337_2033622_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003100401.1\|2033625_2035665_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_003100403.1\|2035886_2037512_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_061866600.1\|2037576_2039553_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_003100405.1\|2039757_2040471_+	trehalose operon repressor	NA	NA	NA	NA
WP_003100406.1\|2040439_2041261_+	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	4.5e-41	43.1
WP_003100407.1\|2041364_2041985_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	1.3e-51	55.2
WP_003100408.1\|2041994_2042495_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003100409.1\|2042505_2043438_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003100412.1\|2043695_2045891_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	2.1e-279	64.5
WP_003100414.1\|2046005_2047565_-	hypothetical protein	NA	NA	NA	NA
WP_071794741.1\|2047637_2047778_-	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_016356258.1\|2047779_2049933_-	ferrous iron transport protein B	NA	NA	NA	NA
WP_003100421.1\|2049907_2050405_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_003100423.1\|2050582_2050882_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_037582983.1\|2050892_2051312_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_003100426.1\|2051308_2051578_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_003100427.1\|2051689_2052088_-	transcriptional regulator Spx	NA	NA	NA	NA
WP_003100429.1\|2052682_2053816_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.2e-121	64.9
WP_003100430.1\|2053897_2055169_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_003100431.1\|2055303_2055855_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_003100432.1\|2055857_2056451_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003100433.1\|2056452_2057676_-	MFS transporter	NA	NA	NA	NA
WP_003100434.1\|2057685_2059644_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	8.2e-65	30.9
WP_003100436.1\|2059778_2062319_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.4e-40	23.6
WP_003100437.1\|2062305_2062659_-	hypothetical protein	NA	NA	NA	NA
WP_003100439.1\|2062655_2063093_-	arginine repressor	NA	NA	NA	NA
WP_003100441.1\|2063383_2065072_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	2.1e-77	32.9
WP_003100443.1\|2065111_2065990_-	YitT family protein	M1Q1P6	Streptococcus_phage	4.7e-52	37.5
WP_003100445.1\|2066207_2067092_-	YitT family protein	M1Q1P6	Streptococcus_phage	6.2e-44	34.9
WP_003100448.1\|2067109_2068045_-	YitT family protein	NA	NA	NA	NA
WP_003100450.1\|2068037_2069786_-\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	2.7e-11	25.2
WP_016356260.1\|2069944_2071219_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000290414.1\|2071549_2071732_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_002982147.1\|2071747_2071897_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_089180127.1\|2072085_2073316_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.1e-62	48.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection