CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022374	Acetobacter oryzifermentans strain dm chromosome, complete genome	2 crisprs	cas3,DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DinG,csa3	11	9	8	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022374_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022374_1

1815295-1815628

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CRT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	PILER-CR

5 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP022374_1

>merge|NZ_CP022374|1|1815295-1815628|CRISPRCasFinder,CRT,PILER-CR
CAGTTCATCCCCGCGTGTGCGGGGAACACTAGCGAGGTTCCTGCGGTTCCCATGTGGTTCCCGGTTCATCCCCGCGTGTGCGGGGAACACTGTTTCACGCCTTCTCTCCTGCGCGGGTGTTCCGGTTCATCCCCGCGTGTGCGGGGAACACAGCCTCCTCAGCCACCACGCGCTGTCTCACGCCGGTTCATCCCCGCGTGTGCGGGGAACACATCAGGCAGCAGATCTGTCAGGCTGTAGGTATCGGTTCATCCCCGCGTGTGCGGGGAACACTGCCCATCCCCATATTGAGGGCGCCACCAAGGCGGTTCATCCCCGCGTGTGCGGGGAACAC

>NZ_CP022374|1|1|1815295-1815628|CRISPRCasFinder
CAGTTCATCCCCGCGTGTGCGGGGAACAC	TAGCGAGGTTCCTGCGGTTCCCATGTGGTTCC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TGTTTCACGCCTTCTCTCCTGCGCGGGTGTTC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGCCTCCTCAGCCACCACGCGCTGTCTCACGC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	ATCAGGCAGCAGATCTGTCAGGCTGTAGGTAT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TGCCCATCCCCATATTGAGGGCGCCACCAAGG
CGGTTCATCCCCGCGTGTGCGGGGAACAC

>NZ_CP022374|1|1|1815295-1815628|CRT
CAGTTCATCCCCGCGTGTGCGGGGAACAC	TAGCGAGGTTCCTGCGGTTCCCATGTGGTTCC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TGTTTCACGCCTTCTCTCCTGCGCGGGTGTTC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGCCTCCTCAGCCACCACGCGCTGTCTCACGC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	ATCAGGCAGCAGATCTGTCAGGCTGTAGGTAT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TGCCCATCCCCATATTGAGGGCGCCACCAAGG
CGGTTCATCCCCGCGTGTGCGGGGAACAC

>NZ_CP022374|1|1|1815297-1815628|PILER-CR
GTTCATCCCCGCGTGTGCGGGGAACACTA	GCGAGGTTCCTGCGGTTCCCATGTGGTTCCCG
GTTCATCCCCGCGTGTGCGGGGAACACTG	TTTCACGCCTTCTCTCCTGCGCGGGTGTTCCG
GTTCATCCCCGCGTGTGCGGGGAACACAG	CCTCCTCAGCCACCACGCGCTGTCTCACGCCG
GTTCATCCCCGCGTGTGCGGGGAACACAT	CAGGCAGCAGATCTGTCAGGCTGTAGGTATCG
GTTCATCCCCGCGTGTGCGGGGAACACTG	CCCATCCCCATATTGAGGGCGCCACCAAGGCG
GTTCATCCCCGCGTGTGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022374.1\|WP_089179171.1\|1814185_1815259_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
NZ_CP022374.1\|WP_089179934.1\|1816021_1816981_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP022374.1\|WP_089179172.1\|1815699_1816041_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP022374.1\|WP_089179164.1\|1798640_1800230_-\|bifunctional-aspartate-transaminase/aspartate-4-decarboxylase	unknown	unknown	gnl\|CDD\|236444
NZ_CP022374.1\|WP_089179166.1\|1803875_1805498_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP022374.1\|WP_089179177.1\|1820106_1821759_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP022374.1\|WP_006117247.1\|1797422_1798523_-\|asparaginase	unknown	unknown	gnl\|CDD\|199208
NZ_CP022374.1\|WP_089179168.1\|1808808_1809879_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NZ_CP022374.1\|WP_006117250.1\|1803141_1803420_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_089179165.1\|1800255_1801947_-\|aspartate-alanine-antiporter	unknown	unknown	gnl\|CDD\|274793
NZ_CP022374.1\|WP_081461469.1\|1824846_1825116_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_089179174.1\|1817683_1818466_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP022374.1\|WP_089179176.1\|1819546_1820107_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP022374.1\|WP_089179175.1\|1818471_1819527_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP022374.1\|WP_089179178.1\|1821826_1824541_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP022374.1\|WP_089179169.1\|1811438_1812794_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP022374.1\|WP_089179173.1\|1816997_1817687_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_CP022374.1\|WP_089179170.1\|1813078_1813471_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_089179935.1\|1825155_1825512_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_089179167.1\|1806194_1808708_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657

Protein	Function_ID	Function_description	E-value
NZ_CP022374.1\|WP_089179171.1\|1814185_1815259_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	0
NZ_CP022374.1\|WP_089179934.1\|1816021_1816981_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.47459e-134
NZ_CP022374.1\|WP_089179172.1\|1815699_1816041_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.6989e-54
NZ_CP022374.1\|WP_089179164.1\|1798640_1800230_-\|bifunctional-aspartate-transaminase/aspartate-4-decarboxylase	gnl\|CDD\|236444	PRK09275, PRK09275, bifunctional aspartate transaminase/aspartate 4-decarboxylase.	0
NZ_CP022374.1\|WP_089179166.1\|1803875_1805498_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP022374.1\|WP_089179177.1\|1820106_1821759_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	6.66588e-115
NZ_CP022374.1\|WP_006117247.1\|1797422_1798523_-\|asparaginase	gnl\|CDD\|199208	cd08964, L-asparaginase_II, Type II (periplasmic) bacterial L-asparaginase. Asparaginases (amidohydrolases, E.C. 3.5.1.1) are enzymes that catalyze the hydrolysis of asparagine to aspartic acid and ammonia. In bacteria, there are two classes of amidohydrolases. This model represents type II L-asparaginases, which tend to be highly specific for asparagine and localized to the periplasm. They are potent antileukemic agents and have been used in the treatment of acute lymphoblastic leukemia (ALL), but not without severe side effects. Tumor cells appear to have a heightened dependence on exogenous L-aspartate, and depleting their surroundings of L-aspartate may starve cancerous ALL cells. Type II L-asparaginase acts as a tetramer, which is actually a dimer of two tightly bound dimers. A conserved threonine residue is thought to supply the nucleophile hydroxy-group that attacks the amide bond. Many bacterial L-asparaginases have both L-asparagine and L-glutamine hydrolysis activities, to a different degree, and some of them are annotated as asparaginase/glutaminase.	6.68442e-143
NZ_CP022374.1\|WP_089179168.1\|1808808_1809879_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP022374.1\|WP_089179165.1\|1800255_1801947_-\|aspartate-alanine-antiporter	gnl\|CDD\|274793	TIGR03802, Asp_Ala_antiprt, aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).	0
NZ_CP022374.1\|WP_089179174.1\|1817683_1818466_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.31048e-32
NZ_CP022374.1\|WP_089179176.1\|1819546_1820107_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.17545e-19
NZ_CP022374.1\|WP_089179175.1\|1818471_1819527_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.66505e-119
NZ_CP022374.1\|WP_089179178.1\|1821826_1824541_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.77021e-130
NZ_CP022374.1\|WP_089179169.1\|1811438_1812794_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.50118e-52
NZ_CP022374.1\|WP_089179173.1\|1816997_1817687_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	3.03777e-49
NZ_CP022374.1\|WP_089179167.1\|1806194_1808708_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	4.31353e-59

>NZ_CP022374.1|WP_089179171.1|1814185_1815259_+|alkene-reductase
MPSLFEPIKLGSIYAKNRILMAPLTRGRSTRQHVPTPIMAEYYAQRATAGLIISEATGISQEGLGWPYAPGLWSQEQIEAWKPVTAAVHAKGGKIVAQLWHMGRMVHSSVTGQQPVSCSATKAPEPLHTYNGKQPPEVARPLTKDDIARILNDYEKAARNALEAGFDGVQIHAANGYLIDEFLRDGTNHRSDEYGGSPENRIRFLHEVTKRVIATIGADRTSVRLSPNGNTQGCIDTHPDQVFVPAAKLLNDLDIAFLELREPGPHGTFGKTDQPKLHAPIRKVFTKPLVLNQDYTRDEAIETVATGIADAIAFGRPFLANPDLVHRLEDNLPLNKDDIQTWYTQGAEGYTDYPLAR
>NZ_CP022374.1|WP_089179170.1|1813078_1813471_-|hypothetical-protein
MKIIRTAVAMVIIAITGACTSTGDASIKHTTLTEVNQNIHDGVTTSFQVHQIYGEPGQKGYENGYEFWVYSFTVGREDGLSIAQDVVGLGMLGARTNNKSKTLTIVFNNGIVLNHSFSTANFSSSSGIRQ
>NZ_CP022374.1|WP_089179169.1|1811438_1812794_-|MFS-transporter
MNNQPVSDTQRRLVMLCAVLGIVLGGLDGAIANIALPTIARDLSCSETLTVWIVNGYQLAVAVSLLPAAALAESLGLKRVYAFGLALFTAASLACALSGSIGLLVGSRVLQGVGGACMAALSGALVRSVYPREFLHKAFATIALAVAISAATGPTLAAAVLSVATWPWLFLINLPIGLIAVPLFLRVAPHSPRRSFTFDWLGALLNVGALGLGVLGVDALGQKEPRWAGIEIGTGFLCAVMLYMQQRRQKAPMLPLDLLAIPLFSLSILTSVCAYAAQILAYVALPFLFQTVMHQSAVTTGLLVTPWPLLVAVAAPFAGRLAARHPASVLSSIGLTILAAGLTMLSIMPAHPPFWDVAWRMGLCGIGFGFYQTPNNLTVMTSGPTTRSGAASGMLAVARTMGWALGSALVALVFGLSEGSSGAVHCLELATGFALTGALLSVSRRVIRDKQ
>NZ_CP022374.1|WP_089179168.1|1808808_1809879_-|NAD(P)-dependent-alcohol-dehydrogenase
MFTCVGYAASSATTPLAPFTFQRRDCGPLDVQIDITHCGICHSDIHTVRSEWGPASYPCVPGHEIIGRVAAVGVDVTRFKLGELVGVGCMVNSCQTCASCEAGLEQYCDAGPTWTYNSPDPDFPKTDAYTFGGYSRAIVVDERFVLRVPENLDPAAAAPLLCAGITTWSPLSHWKVGVGHKVGIVGLGGLGHMAVKFAVALGAEVTLFTTSANKVEDGKRLGAHHVVISRDAEAMAAEANQFDFILDAVSAEHDINAYLALLKQDGHMVLVGLPEKPMSIGAFSLVAKRRSLAGSAIGGIQETQEMLDFCGKHNITSDIEVVRADQINEAYGRVLRSDVKYRFVIDMASMPNSAAA
>NZ_CP022374.1|WP_089179167.1|1806194_1808708_+|TonB-dependent-receptor
MARPANITRPLFLGTTSIFCLLAEPVHAQNESSSLPKQHQTTGKKAPSTSRARQLTVSDPHPVAAQPATGGTEAVIVTGTREIGKKARDSISPVDIITARQLSETGMPSLREALTQLAPSLTMPTSGYDAGALTSAFSLRGLSPNETLVLVDGKRRHTTANIYADPGPQQGSTPVDVDMIPLAAIDHVEILRDGASAQYGSDAVAGVVNIILKKQDHGFHAQSLTGITASKDGFEQGIYMDGGAKLTDRGYIHVSGDYVHEDHTYRSAPDLRTNTKINKLLGQPEQTRETVAVKAGYHILDNLEAYAVATYAHRHAESFQNYRTASSLDNYPAYAAIYPNGYSPVMTMDENDWEVTAGLRGEIDNWHWDLSSVYGRDYDRIGIANSANLALSTDTGRTPTNFNAQGYNNEQWSNTFDLSKAFHIPGWPYAINVAGGASYRYESYSIGTGSPDSTYSSGSDALQGTVAANAGNYSRDVIGGYIDIATHLAKNVQLDLAGRYEHYTDVGDTETGKAALRYDPLPWLGLRATISNGFHAPTLAQEYYSAVAVSPTAARGIIAANSPGARANGASALKPERSTNVSGGIVLEPVKRLHITADVYQINLRDQILPGGNVYGTDALSALQMNGFTLPADAATWGSSLSTHWFANVASTRTQGLDITATYPTELSPTIGRIDWDVGINLNRTRLTHQSNAADGTPLLTAQSIAYITTAYPRSKMIWGGRFTSSDGKWTVGVHEIRWGQTTSELTDYTGPTNSASVSAYSFTQFHNTPKFVTNLDITYRVMPQLSFTLGANNLFNALPSRVPDSNRYLGVPQYYMSTSQLGINGGFYYLKADVRF
>NZ_CP022374.1|WP_089179166.1|1803875_1805498_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MIRLDTISKYNGHRVIFVDASASLQKGEKIGLVGPNGAGKTTLFRLITKEEEPDEGNVLIDRGITIGFFNQDVGEMAGRSAVAEVMDGAGPVAEVGAELAELEAALADPERLDELDAILERFGEVQGRFEELGGYALDGRAREVLHGLGFSQEMMDGDVGRLSGGWKMRVALARILLMKPDVMLLDEPSNHLDLESLIWLEQFLAGYDGALLMTSHDRAFMNRVINKVIEIDGGVLTSFSGDYEFYEQQRALNEKQQQAQFERQQAMLAKEVAFIERFKARASHAAQVQSRVKKLDKIDRIEPPKRRQTLSFTFPPAPRSGDVVVNLRGVDKAYGSRVIYKNLDLLIRRQERCCVLGINGAGKSTLLKLVTGSTEPDAGTVTLGGSVKMGYFAQHAMDLLDGDRTIFETLNDAFPLASQGSLRSLAGSFGFSGDDIDKLCRVLSGGEKARLVLALMLYDPPNFLVLDEPTNHLDIATKEMLITALADYEGTMLFVSHDRHFLAALSNRVLELTPEGLLRYDGGYTEYVARTGREAPGLHE
>NZ_CP022374.1|WP_006117250.1|1803141_1803420_-|hypothetical-protein
MVNQGGSHEQHVKAGEQSHKNTGSSHTEKNAGEHSSGTRGGTHEQHVKAGEQSHKNTGTSHDERNTGKHSSGTRGGTHEQHVKAGQQSHKNT
>NZ_CP022374.1|WP_089179165.1|1800255_1801947_-|aspartate-alanine-antiporter
MHAFTALLSGLFGACPEMALFLALVIGCWIGRFRFGSFQLGGVAGSLLAAVLISQVGVHIDSGIKSVLFALFIYAVGYQSGPQFFRSLGRQSLKEILMAVVLAITGLITVVAVARIFHLDKGLAAGLAAGGLTQSAIIGTAGSSLEKIGLPLAQVQQLQGNVAVGYAVTYIFGSIGPILLCVNVLPWFMKRGIREDAIRAEAEQAGGVHVMGEGEVSAFPNLVGRAYRLTQSDLTVASVESMAAGVTVEQVLRNGKPAGVGADTPLLPGDQILLVGQRPDVLSAGQSIGQEIGEVPGLDLSLIRRDVVLSRKDFVGKTVDQCVQSLSAAVRHGVYLVALSRAGKAVPITGSMQVKDGDIVTLLGTSADVQRAAAQIGTILLPSIKTDLVFHSLGVALGLLIGLGVVHMGSVPLTLGSGGGALLSGLLFGWYQSRHPVMGNMPQGASTFLVDFGLAGFVAVTGLQTGQQAIATIMQHGITLFLLGVVVTLVPLILTMFFGRYVLRYNNTAIFAGALAGSRSANPAFGEVLNKAGNAVPTTPFAITYAVANVLLTLLGPLVVAFS
>NZ_CP022374.1|WP_089179164.1|1798640_1800230_-|bifunctional-aspartate-transaminase/aspartate-4-decarboxylase
MTIDYSKFRDLSPFELKDTLISLASSKADRVMLNAGRGNPNFLATLPRAAFFLLGQYALAEARLFLSYLSPGLGGTVRIEGIEARFDRFIESNEDKEEAALLGHALSYVRDQMGLPADTFLVEMVEGILGCYYPTPPRMLTLSEKIVGQYVLREMVGGRISLDSTDFFATEGGTAAMAYVFNSLKQNDLIKKGDKVAIGMPIFSPYIEIPQLEEYGLEVVPVQADPSLDWQYPESELEKLRDPAVKMFFCVNPSNPPSVKMNDASLEKIASIVKDRPDLMILTDDVYGTFADGFRSLYAICPRNTILVYSFSKYFGATGWRLGVIGMHKDNAIDARLAQLPADAKAALAKRYSSLTTDSADLKFIDRLVADSRAVALNHTAGLSTPQQVQMVLFSLFALMDHEGRYKATLKSVIRRREAALYHELGVAPSEDANAVDYYTLIDLEDTCRALYGENFAQWMLKRASTGEILFRIADETGIVLLPGAGFGTTRPSARASLANLNEFQYAAIGRSLRKMVEEYHAEFVKTQA
>NZ_CP022374.1|WP_006117247.1|1797422_1798523_-|asparaginase
MVSVRGLPILAAILGVASVMPVFSHAEGASAPPVAHKQVSLPRVLVLATGGTISGKADTRSAIGYDAGAVTGEQLIAGVPGVEKLAQLQVEQISNIASQNMNSQVWFKLAERIRQAFANNEVDAVVITHGTDTMEETAFFLDNVIGDARPVILTGAMRPSTAISADGPANMYEAVKVAADPQARGRGVLVVLNDEVQSARGVSKMHTTALQTFHSPNLGPVGYVDPASVRFVAPAKPQQHLDLPADHTLPRVQIVYAHADMDAQQIDDAVKNGARGIVIAGMGDGNVSTDALAGIERATKSGVIVVRSTRVGNGFVNRDVEVDDDHYGLVASMDLNPQKARILLQLLLANGKTSAADIQKAFSAGF
>NZ_CP022374.1|WP_089179172.1|1815699_1816041_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVIVVENAPPRLRGRLAVWLLEVRAGVYIGSYGRRVREMIWGQVCAYIEDGNAVIAWAAPNDAGFEFDTCGENRRVPVDLDGLRLVAFGREAALPMQPGPAVMTLPRRRGRG
>NZ_CP022374.1|WP_089179934.1|1816021_1816981_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MSRPMPGLPPPRPIPLKERSSILFVAMGQLDVLDGAFVLVDQNGIRTHIPIGGLVCLMLEPGTRVSHAAAALAARAGTLLIWVGEAGVRLYASGQPGGARADRLLFQARLALDDTARLKVVRKMYALRFGEDAPERRSVDQLRGIEGARVRETYRLLARSHGADWDGRRYDPHEWDTANVVNRCLSAATAALYGITEAAILAAGYAPAIGFLHTGKPQSFVYDIADIVKFEVVVPEAFRVAAAVQRDRPLDGQRVIDPVASVRHRCRDQFRKTNILGRLIPLIEDVLAAGEAGPPPVQKEAMPVAFADPKGLGDAGHRG
>NZ_CP022374.1|WP_089179173.1|1816997_1817687_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MSAGFLSRVALRRDASVQAIARLLVPQGEGQQHGAAHHLLWTLFGDSADRTRDFLWRQTEPGHFMVLSIREPVDQHGLFDIESREFAPRLKKESSLRFLLRANATVDRKVPGRTRSQRHDIVMDALHKLPSKERAVARESVVPAVMAAWLTRQGARTGFDLAAEALGIESCDVLRIPRAQGQGKATLGVVDVTGVLRVTDPALFTSALLQGFGRARAFGCGLMLIRRAF
>NZ_CP022374.1|WP_089179174.1|1817683_1818466_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MGHFLTFAMVAPMASFGTLAVGERRDGGDRPARSAVLGLLGACLGLTREDEAGQNALAQGYGLAVLCHASGRLLTDYHTAQTAPSRRNWRPATRAQELAEAPGEVATILSRRDYRMGSWHLGALWVRGDNPRWSLAEIQDALQEPVFTPSLGRKSCPPGLPLAPELVEGESATAVLLERQDSGPESSMRNRFGLFRDQLAGRNSRTETLVVLDAADVVEHGAGHTIIRREIRRDHPLSRTRWQFGLREEALILCAKEAGV
>NZ_CP022374.1|WP_089179175.1|1818471_1819527_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MHRFLQLHLLTFYPPSNVNRDDTGNPKTATVGGVTRLRISSQALKRAWRTSGVFETALTGHMGQRTQRLGEEVLAHLREGGVEEKKAVAIAREIAGVYGKVKGEKDVNPTRTEQLVFISPSEREAAFAVADRLASGEKVDLKKEQDTLLHRTDSAADIALFGRMLASAPAFNREAAVQVAHAITTHRVTVEDDYYTAVDDLKDEEDAGAGFLGEAGFGSGVFYLYLCINRDLLKKNLGDESETGVAEAALGSLVEAAMTVSPSGKQNSFAALARAGYVLAEKGNAQPRTLAGAFARPVGGADLMEQSIKALKEFRAELVRVYGASADETCELALGDKKSATLADIVAFCRT
>NZ_CP022374.1|WP_089179176.1|1819546_1820107_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MFVGDKETVQQVVSWWYGLQPNPEKKQQGDRAALARLRRCATITEALFEPETQALVRKCGAKRGSELSRLALAASVLAHVRSNKADVSIARQIGPVDTNDDATALCKPVRFRKVLDAETYDDCLRVFRRLVVLAGGALNVADLARSVMMWPREDMPDDLVGDQVRRQWVYDYWNAGHPDSAFDKKN
>NZ_CP022374.1|WP_089179177.1|1820106_1821759_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MVSVPLNLISESWLPVCHKSGACSIIRPAQIVEGLKDDPIVGFAWPRADFRIASFEFLIGLVATACPPADYRVWPKGWRVPPSVEKLDEAFARVADAFWLDGPGPRFLQDYEDIQSGQEPVERLLIDAPGESTVKRNADLFVHRGQIEYLGRAAAAMALFTLQSWAPSGGAGNMTGLRGGGPLTTLVLPSEDASLWEIIWANVPAGKPVTVEDMEKVFPWMAPTVISGKAGMDVRAKENVHPLQCWWGMPRRIRLDFGKSNGKVCNLTGMSDDILVSGWRQRPYGPKYAGWIGMPYGAGCAIHPLTPRYRQKKGTEWLAVHPQPGGIGYRHWAGVVVESADQNRLPASCVANWRNERADEVGLLPNARLLAAGFDMDNMKARSFVESEMPLPGSQNPDQQKNIDSLALQCVGAATQIADILRGSVREALFGKGTVSVDVTLLSNVRERFWAETEVSFFALLQDAAGVDSEDIALRKSWLQTLARVALQEFDATVILEPDMGITEAQRSALARRRLGAAVSGRGKEGEKIRDNLGIPAPVKKKQKATEKVS
>NZ_CP022374.1|WP_089179178.1|1821826_1824541_-|CRISPR-associated-helicase/endonuclease-Cas3
MPDTQEGKGLKFFWGKARPASVGLGEDSSIHPLIAHMLDVAAVAILLPGSQRLGLDNRQLGMLVALHDIGKLTPAFQAKVPECWPEQALGECPDEVVASRHDVDGVLFLDRICREELAPLFGTDSEGEGWLLSDKRRLWRAVAGHHGQPVSVNDYQTRASDIKLSAPYAHKLVSLLFDVFRPPPIKPYHSLDHLLQLEWQLAGLTVQADWIGSRQEWFPYVRPDDVDDLSGYFWNKALPRAQSAIVHAGLAPASISPFQGIAHLFPHIRTPSPVQALLDVTSLPAGPTLVVIEDMTGSGKTEAALVAAHRLMASGRASGLFVALPTMATANAMFDRLATAYRNLFQPSSHPSLALAHGRALLDERFVSVLAPDDVLDGAELKKDRDQAAEICCSAWLGREARRALLAQVGVGTIDQALMAVLPVRFATVRQAGLAGKVLLVDECHAYDPYMQEEMVALLRFHAAMGGSAILLSATLTKAVRQKLTDAFREGLRQEKSVSLSCMAYPLVTVVGKAEVEELPCAPRPGLERSITVRQVREEAAVMAEVSLAAAKGAAVAWVRNTVDDVIASAKALKEQGIEIMVFHARFAMVDRLAIERAVLARFGKNGTATERAAVLIASQVIEQSLDLDFDVLCTDLAPMDLIIQRAGRLRRHTRKQRPVDCDEIYIFSPDPVANPDPKWISRLLPGTAAVYRDHALLWRTAKVLQRKGKIQSPDAIRELIEEAGNVSDVPDGLMAASDEAEGKGRAARGEAMRNVLDYEAGYAPDSALWEREVRTSTRLEERPYVTVRLGIMKDGQVCPWAALQDVALAVPHERKRAWALSEVSAARHVLAACPVVGSQQEAVSAARAEWPRWERDAEDQFLLLLLEEAEEGWRGVGRNEAEQDVVVCYDKKYGFQILKETLT
>NZ_CP022374.1|WP_081461469.1|1824846_1825116_-|hypothetical-protein
MDFPTQNGAGRPYLAAKDLTKEQCRFILSLPISGEYGIPIADRGAIRGSLILMGYVAAGFSVRWGSAAARLTSRGRSMHRELMSRENHW
>NZ_CP022374.1|WP_089179935.1|1825155_1825512_-|hypothetical-protein
MLEKIIFLAPDRTCVISLLGTDAALPEEEQLQQNGYDLFQMTVSNLPTDHQIRGDYLEAHFRPLLDTAIEMAMALTDRPAHVPEASYVQTYIAVQNLIGAQKAAMDLYCRVQVEFMIS

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Crispr_ID: NZ_CP022374_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022374_2

2203971-2204487

Orphan

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGCGTGTGCGGGGAACAC	PILER-CR
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CRT

8 spacers

The CRISPR arrays of NZ_CP022374_2

>merge|NZ_CP022374|2|2203971-2204487|CRISPRCasFinder,PILER-CR,CRT
AAGCTAGTCACCACGCGTGTGGGGAACACCCAACGAGCACGACCTTATTTACGGAGTCAGCCGGTTCATCCCCGCGTGTGCAGGGAACACCGTGGCGTGCGCCGTTTCGTGTTCCTGCCTATCGGTTCATCCCCGCGTGTGCGGGGAACACTCCTGAAATCCGGCTGCCATTTGCGGGATACCCGGTTCATCCCCGCGTGTGCGGGGAACACCACCAAGGCCTCTCTCGCCAACCTACGAGATCCGGTTCATCCCCGCGTGTGCGGGGAACACGCGAAAACGTCCTACACCAATCATCATTCCAGCGGTTCATCCCCGCGTGTGCGGGGAACACAGGACACGCCACACGCAGCTTCATTCTTGCGTCGGTTCATCCCCGCGTGTGCGGGGAACACAGGCATTGGCCTGTGCCGGTGTGCGGCTCATGCGGTTCATCCCCGCGTGTGCGGGGAACACGGTTTGTATGGCCGCCAAAATCCCGCGTGTGGCGGTTCATCCCCGCGTGTGCGGGGAACAC

>NZ_CP022374|2|2|2203971-2204487|CRISPRCasFinder
AAGCTAGTCACCACGCGTGTGGGGAACAC	CCAACGAGCACGACCTTATTTACGGAGTCAGC
CGGTTCATCCCCGCGTGTGCAGGGAACAC	CGTGGCGTGCGCCGTTTCGTGTTCCTGCCTAT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TCCTGAAATCCGGCTGCCATTTGCGGGATACC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CACCAAGGCCTCTCTCGCCAACCTACGAGATC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	GCGAAAACGTCCTACACCAATCATCATTCCAG
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGGACACGCCACACGCAGCTTCATTCTTGCGT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGGCATTGGCCTGTGCCGGTGTGCGGCTCATG
CGGTTCATCCCCGCGTGTGCGGGGAACAC	GGTTTGTATGGCCGCCAAAATCCCGCGTGTGG
CGGTTCATCCCCGCGTGTGCGGGGAACAC

>NZ_CP022374|2|2|2204032-2204487|PILER-CR
CGGTTCATCCCCGCGTGTGCAGGGAACAC	CGTGGCGTGCGCCGTTTCGTGTTCCTGCCTAT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TCCTGAAATCCGGCTGCCATTTGCGGGATACC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CACCAAGGCCTCTCTCGCCAACCTACGAGATC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	GCGAAAACGTCCTACACCAATCATCATTCCAG
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGGACACGCCACACGCAGCTTCATTCTTGCGT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGGCATTGGCCTGTGCCGGTGTGCGGCTCATG
CGGTTCATCCCCGCGTGTGCGGGGAACAC	GGTTTGTATGGCCGCCAAAATCCCGCGTGTGG
CGGTTCATCCCCGCGTGTGCGGGGAACAC

>NZ_CP022374|2|2|2204032-2204487|CRT
CGGTTCATCCCCGCGTGTGCAGGGAACAC	CGTGGCGTGCGCCGTTTCGTGTTCCTGCCTAT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	TCCTGAAATCCGGCTGCCATTTGCGGGATACC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CACCAAGGCCTCTCTCGCCAACCTACGAGATC
CGGTTCATCCCCGCGTGTGCGGGGAACAC	GCGAAAACGTCCTACACCAATCATCATTCCAG
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGGACACGCCACACGCAGCTTCATTCTTGCGT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	AGGCATTGGCCTGTGCCGGTGTGCGGCTCATG
CGGTTCATCCCCGCGTGTGCGGGGAACAC	GGTTTGTATGGCCGCCAAAATCCCGCGTGTGG
CGGTTCATCCCCGCGTGTGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022374.1\|WP_063354444.1\|2197847_2198243_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_006117473.1\|2205548_2205905_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100007
NZ_CP022374.1\|WP_089179361.1\|2195445_2196243_-\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
NZ_CP022374.1\|WP_035351905.1\|2194405_2195311_-\|elongation-factor-Ts	unknown	unknown	gnl\|CDD\|236491
NZ_CP022374.1\|WP_089179360.1\|2193598_2194390_-\|DNA-repair-protein-RecO	unknown	unknown	gnl\|CDD\|234622
NZ_CP022374.1\|WP_089179364.1\|2204659_2205499_+\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|376824
NZ_CP022374.1\|WP_089179367.1\|2209874_2210786_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl\|CDD\|235573
NZ_CP022374.1\|WP_006117480.1\|2212030_2212243_-\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|238219
NZ_CP022374.1\|WP_063354449.1\|2206213_2207248_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223787
NZ_CP022374.1\|WP_089179363.1\|2199109_2200495_-\|anthranilate-synthase-component-I-family-protein	unknown	unknown	gnl\|CDD\|223225
NZ_CP022374.1\|WP_063354443.1\|2196408_2197536_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|226985
NZ_CP022374.1\|WP_006117478.1\|2210978_2211542_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP022374.1\|WP_089179368.1\|2211557_2211857_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_089179365.1\|2207298_2208504_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP022374.1\|WP_089179366.1\|2208507_2209710_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP022374.1\|WP_089179369.1\|2212364_2213027_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022374.1\|WP_089179359.1\|2191312_2193520_-\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503
NZ_CP022374.1\|WP_063354952.1\|2190528_2191302_+\|arginyltransferase	unknown	unknown	gnl\|CDD\|234939
NZ_CP022374.1\|WP_006117471.1\|2200497_2203917_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP022374.1\|WP_089179362.1\|2198312_2199113_-\|aminotransferase	unknown	unknown	gnl\|CDD\|223193

Protein	Function_ID	Function_description	E-value
NZ_CP022374.1\|WP_006117473.1\|2205548_2205905_+\|RidA-family-protein	gnl\|CDD\|100007	cd06150, YjgF_YER057c_UK114_like_2, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	4.56872e-53
NZ_CP022374.1\|WP_089179361.1\|2195445_2196243_-\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	2.92114e-165
NZ_CP022374.1\|WP_035351905.1\|2194405_2195311_-\|elongation-factor-Ts	gnl\|CDD\|236491	PRK09377, tsf, elongation factor Ts; Provisional.	4.06467e-147
NZ_CP022374.1\|WP_089179360.1\|2193598_2194390_-\|DNA-repair-protein-RecO	gnl\|CDD\|234622	PRK00085, recO, DNA repair protein RecO; Reviewed.	6.3023e-35
NZ_CP022374.1\|WP_089179364.1\|2204659_2205499_+\|pantoate--beta-alanine-ligase	gnl\|CDD\|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	3.54633e-141
NZ_CP022374.1\|WP_089179367.1\|2209874_2210786_-\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl\|CDD\|235573	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS.	4.86581e-90
NZ_CP022374.1\|WP_006117480.1\|2212030_2212243_-\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|238219	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions.	1.68782e-18
NZ_CP022374.1\|WP_063354449.1\|2206213_2207248_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	1.50147e-16
NZ_CP022374.1\|WP_089179363.1\|2199109_2200495_-\|anthranilate-synthase-component-I-family-protein	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	7.85795e-145
NZ_CP022374.1\|WP_063354443.1\|2196408_2197536_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	1.75581e-31
NZ_CP022374.1\|WP_006117478.1\|2210978_2211542_+\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	9.32105e-29
NZ_CP022374.1\|WP_089179365.1\|2207298_2208504_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP022374.1\|WP_089179366.1\|2208507_2209710_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP022374.1\|WP_089179359.1\|2191312_2193520_-\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0
NZ_CP022374.1\|WP_063354952.1\|2190528_2191302_+\|arginyltransferase	gnl\|CDD\|234939	PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional.	3.64793e-117
NZ_CP022374.1\|WP_006117471.1\|2200497_2203917_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP022374.1\|WP_089179362.1\|2198312_2199113_-\|aminotransferase	gnl\|CDD\|223193	COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism].	1.57554e-56

>NZ_CP022374.1|WP_006117471.1|2200497_2203917_-|DNA-polymerase-III-subunit-alpha
MSYADFVHLRVHSAYSLSQGAIRVPDIVGLAKEMHMPAVGIADSGNLFGALEFSQYCTKSGIQPIIGSQIGLPARNDKPGAPAEPVVLLAQNEAGLANLQFLSSAGFQNSDPADPFVSLDLLCEKAEGLLLLTGGTRGPLFQMLAEGQTEDAEKWLARVHEAFGDRLIVELHRHGLGVEKAVEPGVLTLADRFGLPLVATNECFFPTPKMYEAQDALLCIAQGRTMAEKDRFRVTPEHWFKPPEMMRALFADLPDACDNTLEIARRCAIKVETRKPLLPVCPKVREGATEDETLRAMAWEGLEHRMSGMKLDAETVEKYKERLRFELDIISKMGFPGYFMIVADFIQWAKAHGIPVGPGRGSGAGSLAAWALTITDIDPIPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVISYVRHEYGSDRVAQIITFGKLQARAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPVTLKEAIAGEPKLQEMRDNDEALRRLLEIAQQLEGLFRHASTHAAGVVIGDRPLVQLVPLYRDPKSDTLVTQYNMKFVEQAGLVKFDFLGLTTLTILKRGVDFIRRMGKDVDLSHIPLDDPKTYEMLGRGDTAGVFQFEGAGMRDVLKQMRPTRIEDLIAAVALYRPGPMANIPDYCRRKHGEVWEPPHEEIRDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIRSEMDHQREIFTEGATKRGIDRDKAVEVFDLMAKFADYGFNKSHAAAYAFVSYQTAWMKANHPVAFLAACMSLARERTEKLAALRQEAERMHIAVLPPNINKSEADFSVEKQPDGTYAIRYALAAIKKVGYGAMESLVEVRGEKPFKNLADFAIRIDPKHINRMQLENLAKAGAFECIDKNRARVFRSADVILRRAHSQAQEAASGQIGLFGGPGEVEPLRLVEGHDWPEFERLAMEAEAIGFHMTAHPLDAYGSVLRRLGVTRTSQLLTAAELGGGRVKIAGCVVDKKERPTRTGNKMAWVRLSDASGGCEVTVFSEVLTRVRDILVAGTAILVTADLKLEGEALRLTATDIVDLEAAAAQGQSEMRVWLEKPDALPDLQAILEPQKGGAGRVVLLPGVADSCDVEVRLRGRYKVTPVLGQRLRTLSGVSRVEQV
>NZ_CP022374.1|WP_089179363.1|2199109_2200495_-|anthranilate-synthase-component-I-family-protein
MVQVKELQWREPDVVLSAWGQQPWCAFLDSGGKIDNRSRWQIFCHNPCHTVVAWPHEIEVDGTKKPIISSDNIFEILRIFHDELKEYAGGSCQQGIPFWGGLIGFASYQMGMILEGVLSRHKDRNTPALAAGMYDHAFIWDRFEKRVFLAGISSFFVNEPNVAQSIREWNMLPERVPPYKLHVTKLFVPDQNHAAYCQSVTQTRNYIAAGDIFQANITCRYTTEIAKNVLSAEVYRALRQQIPAPFGAYLSCGSDFALLSSSPERFLKVDANGCVSSRPIKGTAPRGQTPEEDAFWHNALLHDEKERAENLMIVDLMRHDIGRMAQIGSVYVPDLLVVEQFPHVHHLVSEIRGKLLPDKDIFDLLKVTLPPGSVTGAPKYRAMQIIDELEASARGAYCGTVFRIGIDGSMDSSVIIRSLEHSKNHLSIGVGGGVTILSDPEKEYEEMRLKFAPFQKFWGQA
>NZ_CP022374.1|WP_089179362.1|2198312_2199113_-|aminotransferase
MSIIWLNGKIYPVDQAAISPLDRGVTLGDGLFETLRIKNGTVPHFLWHYQRLCNGAQVLGLPVPEQENTLQAIREFLACAGFENGSVRLTVTRGVAPRGLLPPEHCKPTVFITGAAGVFREQSVRVCVSELVRRDELSPLSRIKSLSYLPGIVARQEAERKGCDDALLLNMQGYIAESTISNIVMQTEAGLITPPVTEGALPGIARRLLLDVGVMQERPVCYEDIVKAQGVYLTNSLSLRTVTHLDGKALSCHPESYGKIREILKK
>NZ_CP022374.1|WP_063354444.1|2197847_2198243_-|hypothetical-protein
MQKILTSMLLGASLSVMPALAMAQDNSGTPPTAEGAASQQGKAPSKAAEGPNGEHVDPSKKLWSNPRTVDEQPGTQPPSNDGKNPAHPVKEYHPHHTPHGKKSGVVESPSETIPGNNQPSSTHLLENHAPQ
>NZ_CP022374.1|WP_063354443.1|2196408_2197536_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MLVEEAKGKQADGSNTPHYDLRQIDCDPNFWYPVAWSHKVRPGKTFAARYAGHPIALIRPEYGPVYALEDRCAHRQVPLSKGVVDDKGCVKCCYHGWAFDRAGKCVTVPYLNKEGVGRPVKSYPCREKSGLIFIFPGDPALADKVPVPDVAQVGNPEYKTRMFSPRLKCHYTFMHENLMDMNHQFLHRRQMGSITARFLGQDKGDDFLEARYSFARKGGNQPLAEALIFGKHHDYEDREQPVEEVVSIRTTYPYQTLQIHDKDGDLIMDLWTSYVPLGETQQVTQAFGLLSVKKPKWNFLLNLAWPALGIFTHRIFEEDREIVEMEQNAWRELGGDHNVEVFPVVKSLRALLARSGVPNKYAHPVETVSKAEDAA
>NZ_CP022374.1|WP_089179361.1|2195445_2196243_-|30S-ribosomal-protein-S2
MAMPDFTLRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVGLLDRALQAIRNTVAGGGRVLFVGTKRAAQDPIAEAARRCGQYYVNHRWLGGMLTNWKTIQGSIKRLRGIEETLDGATAGLTKKEILDMTRQRDKLERSLGGIKEMGGLPDILFVIDTNKEKLAIEEANKLGIPVVAILDSNSDPRGVTFPIPGNDDAIRAIGLYCDLVSSAVLDGISAELGASGQDIGAAEELPVEPALEAAPATETPAPAPAAS
>NZ_CP022374.1|WP_035351905.1|2194405_2195311_-|elongation-factor-Ts
MAAITAALVKELREKTGAGMMDCKKALNEANGDIEAAIDWLRTKGLAAAAKKSGRVAAEGLVGVASADKVAAMVEVNAETDFVARNESFQNFVESVAKVALKVGEDLEAIKAATLETGRTVADELTHLVATIGENMTLRRARVFTVPSGVVATYVHGALRPGLGKIGVLAAIEAPTADEAIEQLGRQVGMHVAATRPSALDVTSLDPAEVERERAVLIEQSRASGKPEAIIEKMVEGRIRKFYEEVVLLEQVWVHDGETRVKDVLKKAGVKLVGFDRFQLGEGIEKEEDDFAAEVAKVAGV
>NZ_CP022374.1|WP_089179360.1|2193598_2194390_-|DNA-repair-protein-RecO
MMDKGGTSYEKEAPALVLFAGVQGETSARIHVLTEDYGPLRGIAYGGASKAGRALWQPGNVVKTSFHKRSAAAPLQISGELLYACAARLLDAPLALGMVQSVCVLADVTLPEADPCPFLFAETVRLLTFLGYDPVVAEREGMPHVVRWEMALLATLGFGLDLSACAVTGSTENLHCVSPRTGRAVSEEGAGEWKDRLLPLPSFLRDTEQTGHAADWLAGLRLTGHFLARDAFGQRHLPLPAARQRLYDRLEMRVLADQTPITE
>NZ_CP022374.1|WP_089179359.1|2191312_2193520_-|DNA-topoisomerase-IV-subunit-A
MSETAGHIEETKLAEALSERYLAYALSTIMSRSLPDVRDGLKPVHRRLVYAMHQLRLDPASGFKKCARVVGDVIGKFHPHGDASVYEALVRLAQDFAARYPLVEGQGNFGSVDGDNPAAMRYTEARLTEVAVALLDGIEDDAVDFRPTYDGEEQEPVVLPSAFPNLLANGAAGIAVGMATSIPPHNAAEVCAAAALLVRKPSATTQELLELMPGPDFPTGGLIVEDSDAILQAYETGRGSFRMRARWEVEQGRFSTWHIVVTQIPYQVQKSRLIEQIADLLDQKKLPLLGDIRDESTDEIRLILEPKTRGIEPEVLMETLFRATPLESRFGLNMNVLGADRSPGVMGLKQVIQAWLNHRHEVLERRSRHRLTAVERRLEILSGFLAVYLNLDEVIRIIREEDDAKASLIATFKLTDLQAESVLNMRLRSLRRLEEMEIRKEHDALSAEQAALMALLDSEKQRWKTIERELTTMIKAFGKGRLGERRSTILSAPKPVDISVVEEVEREPLTMILSQKGWVRAVKGHNVDLENQKFKEGDALKLAIPCQTSDRLCFFATDGRAYTVKGADLPRGRGDGQPIRLLIDLSNDEDLLAVFPIEDGKRRLVASSAGRGMLVEEEALVAEKRSGRQVLNLKEGEFARICVPAEGDHVAVVGDNRRFLIFPLEQLPVMARGLGVALQKYSDGGGLRQAVVFTAADGLHWPGTARVRQFADLQDWVSRRAAVGKVAPPWAGKKP
>NZ_CP022374.1|WP_063354952.1|2190528_2191302_+|arginyltransferase
MTSSQDRPHFFYTAPPGACPYLPNRIERKILVDLATPDANFLHSRLSHAGFRRSHTLAYAPICDGCSACIPIRLPVRNLTPHRTQKRAVRRNADLMRSLLPPTATDEQYTLFRRYLDSRHSDGEMAGMSMHDYRIMVEETPVDTRLVEFRAPDATLMAASLIDVLEDGLSAVYSFYEPNCPQRSLGSFAILSLAELAMQMELPYLYLGYWVPGSPKMAYKERFQPAEILRNGTWQKLDLNYPPKTERAHPFPEGPLF
>NZ_CP022374.1|WP_089179364.1|2204659_2205499_+|pantoate--beta-alanine-ligase
MQIVKTKAELAALSTSWRKDGQTIGFVPTMGALHAGHISLINALDGKASRRIVSIFVNPIQFNNTNDFQHYPRGLEDDAGLLRNTGKVDVLYAPDESQMYPPGFATRISVSGLDTMLCGGDRPGHFDGVATVVTKLFLQTRANIAAFGEKDYQQLCLIKRMVQDLDLPVDILPVPTLREADGLALSSRNRRLTPQQRQQATFLPQALKACLAAMRNGTNVESSLATCREALKNAGFHVHYLELRHAENLAPAPITSKDTRLFVAASLGDIRLIDNMPLA
>NZ_CP022374.1|WP_006117473.1|2205548_2205905_+|RidA-family-protein
MSIKRLAPEERLTGAVIHNGLVYLAGQIADDSTLDAEGQMADILRQVDALLAEAGTDKSRLISAQIFLADMNDMAGMNRAWDAWLDKNNKPARATVEAKLADPTWKVELTGIAALPQP
>NZ_CP022374.1|WP_063354449.1|2206213_2207248_+|ABC-transporter-substrate-binding-protein
MNAQGPSQTRRNLLLAGMGGIAAIGGGTFLATRGKHHTHKQPDGAYRQIKIGWPNSGSAPVLAVAAQKDFFAHYSLDVDLPFATINGEDTINALARGDISYAVAPALTWLRHLYAGLNAQLLIGVQPGNFRLLVRRSSHITRLDQLMGHTVAVMDQNAADKLFFAIMMRRKGLDAMNRINWLDLPLPQIDDAARSQRIDAVVAHDYQAWWLLQSFPDMFIELAGSNTGHYAERTSMVLGASSSALQDDPDAAIALVLALRDAARWTDTHRDDAATLIAPDITDLSAASIRAMLHSEPAIRPVIGKSLREQLAQYCDELQLVSLLPDTEDSTALAHHYARNVLKE
>NZ_CP022374.1|WP_089179365.1|2207298_2208504_-|pyridoxal-phosphate-dependent-aminotransferase
MARSFANRLKGLPAPATIEMARRARALKAEGKPVISLALGEPDFATPPAVVEAAHQAALAGQTKYPPVDGTPALKAAIARKFTRENGLDYKPEEIMVSNGGKQVIFNAFMATLNAGDEVVVPTPYWVSYPLIARMFGATPVFVPCREEDGFRLKADELAKVLTPRTRWVVLNFPNNPTGGVCSADDLRAIAEVLRQYPDIWILSDEIYEHLVFDGAKSASIAAVAPDLKERTITLNGVSKAYAMTGWRVGFAGGPADLIATMRGVQGNATSGVCSIAQAAAAAALDGPADLVQEMVATYGRRRRMVVEALRAIPGFTCAMPDGAFYAYPGVAGCLGRTTAAGKRLETDHDFALALLEEAFVATVPGSAFGHSPYLRLSCATADETLREACQRIAQFVEGLQ
>NZ_CP022374.1|WP_089179366.1|2208507_2209710_-|pyridoxal-phosphate-dependent-aminotransferase
MSIVADRMNRISPSQTIVISTRARALKAEGRNIISLSAGEPDFRTPENISRAAAKAIEDGQTRYTDVAGTPELRKAVAERFKLDSGLDYTPEEIIVSTGGKQVIYNAMMSTLNPGDEAIIPAPCWVSYPDIVTLAEGKPVIVPCKRENGFRITAEQLEAAITPRTKWFFLNSPCNPTGVAYSAEDLRPLCDVLLRHPHVWIFTDDIYAKLVYDGFRPATFVEVEPLLRSRTVTMNGVSKAYAMTGWRIGFSGAPVELTKAMNKLQGQSTSNTCSIAQAAAVEALTGPQEFIQEMVATYQGRRDMVVSMLNEAEGLECDVPQGAFYVFPTVEKCLGKTSPGGKKLETDEDFVTALLEEEGVAAVHGSAFMFPGHIRISYATDTDSLREACARIQRFCKGLL
>NZ_CP022374.1|WP_089179367.1|2209874_2210786_-|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MNNLLHNSQTKHAGWVTRFAPSPTGFLHLGHVASALYGWQKAQPDGEWFVRLEDIDTQRCKPEFIPAILQDLEWLGLCSARPVLRQSVNMPAYQATLARLDAMGVLYPCFCTRSDILRESAAIFSAPHTAPDGSLCYPGTCRHLSDQERQERISQGQPHMLRLNMSKALQWINQCTRGAPLTYQDQERGTVLCYPELFGDVVLARKDIPASYHLCVTHDDAAQGVTLVTRGEDLRPATDLHRVLQALMGWNVPDYSFHPLLCNAEGRRLAKRDGALAVRAMRKAGLSAEDVRCKAGFPHIFER
>NZ_CP022374.1|WP_006117478.1|2210978_2211542_+|HNH-endonuclease
MPDGSALNFPALVLNADFRPLSYYPLSLWAWQDAIKAVWLDRVSVLSEYETEVHSPHHTIRLPSVIALKDYIPAARKPAFTRFNVFLRDNFSCQYCGERHPTQELTFDHVIPRCKGGKTSWENIVTACGCCNLRKGSHLPHVIGMLPRHRPERPSSWQLQENGRAFPPNYLHESWRDYLYWDTELEN
>NZ_CP022374.1|WP_089179368.1|2211557_2211857_-|hypothetical-protein
MQMKNTLCLGFVAVGLTLLGGCSSEVGRLPLVDTDITCLRKQMAGPMYLSFPLAANTCQRMTNHNFMFGEKNAKPIPLNLKDAPDLQKQADEYGYSYTR
>NZ_CP022374.1|WP_006117480.1|2212030_2212243_-|heavy-metal-associated-domain-containing-protein
MTQTTASFMVDGMTCDGCVSAIKRALAAIDGVEATDVNLATREVKVTYDPTRAGVSSLQNAIRGAGYEVS
>NZ_CP022374.1|WP_089179369.1|2212364_2213027_+|hypothetical-protein
MSSLSMYSGPDKMHTTLSQWQDIPLHRLMLATLIEKLENRLLANPSATRVLKQWISTYNLAPDNNLHAHRQTEGTAPCPPFLLQTLLGACDTQAEDVHYRKVQLTAHGKVFSEAENWYIPARLSPEMATQLDTTDKPFGLVVAALNFSRQLIKRESLWFPLPDQWEQHGIPVGSGKPIGLPPYLFRHMAVLRTQTGQAFCVVIETYTAEALGVPPPAMPA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP022374_1	1.1\|1815324\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815324-1815355	32	NZ_CP022374.1	558211-558242	0	1.0
NZ_CP022374_1	1.1\|1815324\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815324-1815355	32	NZ_CP022374.1	3095427-3095458	0	1.0
NZ_CP022374_1	1.4\|1815507\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815507-1815538	32	NZ_CP022374.1	3112176-3112207	0	1.0
NZ_CP022374_1	1.5\|1815568\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815568-1815599	32	NZ_CP022374.1	3111721-3111752	0	1.0
NZ_CP022374_1	1.6\|1815326\|32\|NZ_CP022374\|PILER-CR	1815326-1815357	32	NZ_CP022374.1	558211-558242	0	1.0
NZ_CP022374_1	1.6\|1815326\|32\|NZ_CP022374\|PILER-CR	1815326-1815357	32	NZ_CP022374.1	3095427-3095458	0	1.0
NZ_CP022374_1	1.9\|1815509\|32\|NZ_CP022374\|PILER-CR	1815509-1815540	32	NZ_CP022374.1	3112176-3112207	0	1.0
NZ_CP022374_1	1.10\|1815570\|32\|NZ_CP022374\|PILER-CR	1815570-1815601	32	NZ_CP022374.1	3111721-3111752	0	1.0
NZ_CP022374_2	2.5\|2204244\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204244-2204275	32	NZ_CP022374.1	568030-568061	0	1.0
NZ_CP022374_2	2.7\|2204366\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204366-2204397	32	NZ_CP022374.1	569745-569776	0	1.0
NZ_CP022374_2	2.8\|2204427\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204427-2204458	32	NZ_CP022374.1	567154-567185	0	1.0
NZ_CP022374_1	1.3\|1815446\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815446-1815477	32	NZ_CP022374.1	570353-570384	2	0.938
NZ_CP022374_1	1.8\|1815448\|32\|NZ_CP022374\|PILER-CR	1815448-1815479	32	NZ_CP022374.1	570353-570384	2	0.938
NZ_CP022374_2	2.8\|2204427\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204427-2204458	32	NZ_CP022374.1	3086166-3086197	2	0.938

1. spacer 1.1|1815324|32|NZ_CP022374|CRISPRCasFinder,CRT matches to position: 558211-558242, mismatch: 0, identity: 1.0

tagcgaggttcctgcggttcccatgtggttcc	CRISPR spacer
tagcgaggttcctgcggttcccatgtggttcc	Protospacer
********************************

2. spacer 1.1|1815324|32|NZ_CP022374|CRISPRCasFinder,CRT matches to position: 3095427-3095458, mismatch: 0, identity: 1.0

tagcgaggttcctgcggttcccatgtggttcc	CRISPR spacer
tagcgaggttcctgcggttcccatgtggttcc	Protospacer
********************************

3. spacer 1.4|1815507|32|NZ_CP022374|CRISPRCasFinder,CRT matches to position: 3112176-3112207, mismatch: 0, identity: 1.0

atcaggcagcagatctgtcaggctgtaggtat	CRISPR spacer
atcaggcagcagatctgtcaggctgtaggtat	Protospacer
********************************

4. spacer 1.5|1815568|32|NZ_CP022374|CRISPRCasFinder,CRT matches to position: 3111721-3111752, mismatch: 0, identity: 1.0

tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
tgcccatccccatattgagggcgccaccaagg	Protospacer
********************************

5. spacer 1.6|1815326|32|NZ_CP022374|PILER-CR matches to position: 558211-558242, mismatch: 0, identity: 1.0

tagcgaggttcctgcggttcccatgtggttcc	CRISPR spacer
tagcgaggttcctgcggttcccatgtggttcc	Protospacer
********************************

6. spacer 1.6|1815326|32|NZ_CP022374|PILER-CR matches to position: 3095427-3095458, mismatch: 0, identity: 1.0

tagcgaggttcctgcggttcccatgtggttcc	CRISPR spacer
tagcgaggttcctgcggttcccatgtggttcc	Protospacer
********************************

7. spacer 1.9|1815509|32|NZ_CP022374|PILER-CR matches to position: 3112176-3112207, mismatch: 0, identity: 1.0

atcaggcagcagatctgtcaggctgtaggtat	CRISPR spacer
atcaggcagcagatctgtcaggctgtaggtat	Protospacer
********************************

8. spacer 1.10|1815570|32|NZ_CP022374|PILER-CR matches to position: 3111721-3111752, mismatch: 0, identity: 1.0

tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
tgcccatccccatattgagggcgccaccaagg	Protospacer
********************************

9. spacer 2.5|2204244|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to position: 568030-568061, mismatch: 0, identity: 1.0

gcgaaaacgtcctacaccaatcatcattccag	CRISPR spacer
gcgaaaacgtcctacaccaatcatcattccag	Protospacer
********************************

10. spacer 2.7|2204366|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to position: 569745-569776, mismatch: 0, identity: 1.0

aggcattggcctgtgccggtgtgcggctcatg	CRISPR spacer
aggcattggcctgtgccggtgtgcggctcatg	Protospacer
********************************

11. spacer 2.8|2204427|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to position: 567154-567185, mismatch: 0, identity: 1.0

ggtttgtatggccgccaaaatcccgcgtgtgg	CRISPR spacer
ggtttgtatggccgccaaaatcccgcgtgtgg	Protospacer
********************************

12. spacer 1.3|1815446|32|NZ_CP022374|CRISPRCasFinder,CRT matches to position: 570353-570384, mismatch: 2, identity: 0.938

agcctcctcagccaccacgcgctgtctcacgc	CRISPR spacer
agcctcctcagccaccatgcgctgcctcacgc	Protospacer
*****************.******.*******

13. spacer 1.8|1815448|32|NZ_CP022374|PILER-CR matches to position: 570353-570384, mismatch: 2, identity: 0.938

agcctcctcagccaccacgcgctgtctcacgc	CRISPR spacer
agcctcctcagccaccatgcgctgcctcacgc	Protospacer
*****************.******.*******

14. spacer 2.8|2204427|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to position: 3086166-3086197, mismatch: 2, identity: 0.938

ggtttgtatggccgccaaaatcccgcgtgtgg	CRISPR spacer
ggtttgtatggccgcaagaatcccgcgtgtgg	Protospacer
*************** *.**************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022374_1	1.2\|1815385\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815385-1815416	32	MH622937	Myoviridae sp. isolate ctcg_2, complete genome	33929-33960	4	0.875
NZ_CP022374_1	1.7\|1815387\|32\|NZ_CP022374\|PILER-CR	1815387-1815418	32	MH622937	Myoviridae sp. isolate ctcg_2, complete genome	33929-33960	4	0.875
NZ_CP022374_1	1.3\|1815446\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815446-1815477	32	NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	48243-48274	7	0.781
NZ_CP022374_1	1.5\|1815568\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815568-1815599	32	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	302102-302133	7	0.781
NZ_CP022374_1	1.5\|1815568\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815568-1815599	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	152349-152380	7	0.781
NZ_CP022374_1	1.5\|1815568\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815568-1815599	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	181763-181794	7	0.781
NZ_CP022374_1	1.8\|1815448\|32\|NZ_CP022374\|PILER-CR	1815448-1815479	32	NZ_AP021845	Azospira sp. I09 plasmid pAZI09, complete sequence	48243-48274	7	0.781
NZ_CP022374_1	1.10\|1815570\|32\|NZ_CP022374\|PILER-CR	1815570-1815601	32	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	302102-302133	7	0.781
NZ_CP022374_1	1.10\|1815570\|32\|NZ_CP022374\|PILER-CR	1815570-1815601	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	152349-152380	7	0.781
NZ_CP022374_1	1.10\|1815570\|32\|NZ_CP022374\|PILER-CR	1815570-1815601	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	181763-181794	7	0.781
NZ_CP022374_1	1.2\|1815385\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815385-1815416	32	NC_006949	Enterobacteria phage ES18, complete genome	5612-5643	8	0.75
NZ_CP022374_1	1.2\|1815385\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815385-1815416	32	AY736146	Salmonella typhimurium bacteriophage ES18, complete sequence	5612-5643	8	0.75
NZ_CP022374_1	1.3\|1815446\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815446-1815477	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	249276-249307	8	0.75
NZ_CP022374_1	1.7\|1815387\|32\|NZ_CP022374\|PILER-CR	1815387-1815418	32	NC_006949	Enterobacteria phage ES18, complete genome	5612-5643	8	0.75
NZ_CP022374_1	1.7\|1815387\|32\|NZ_CP022374\|PILER-CR	1815387-1815418	32	AY736146	Salmonella typhimurium bacteriophage ES18, complete sequence	5612-5643	8	0.75
NZ_CP022374_1	1.8\|1815448\|32\|NZ_CP022374\|PILER-CR	1815448-1815479	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	249276-249307	8	0.75
NZ_CP022374_2	2.7\|2204366\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204366-2204397	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1835315-1835346	8	0.75
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	668434-668465	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1940205-1940236	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1946283-1946314	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1960232-1960263	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1948533-1948564	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	2037890-2037921	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1837305-1837336	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1982567-1982598	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	689280-689311	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1973608-1973639	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	2025031-2025062	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	959634-959665	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	2056109-2056140	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	121847-121878	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1673370-1673401	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	118256-118287	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	450-481	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	2050074-2050105	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1948531-1948562	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	470756-470787	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1962479-1962510	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	557198-557229	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	995699-995730	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	340479-340510	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	2033340-2033371	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1920730-1920761	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	438099-438130	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1742973-1743004	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1968032-1968063	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	2095159-2095190	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1836325-1836356	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1939166-1939197	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1939168-1939199	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1963721-1963752	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	2036474-2036505	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1902012-1902043	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1836649-1836680	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1836699-1836730	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1837285-1837316	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1125999-1126030	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1899385-1899416	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1963563-1963594	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	2044808-2044839	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	2036399-2036430	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1937241-1937272	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	2015481-2015512	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	2035142-2035173	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1901956-1901987	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1943008-1943039	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1937553-1937584	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	2015481-2015512	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	203254-203285	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	118003-118034	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	2035262-2035293	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1937241-1937272	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	192337-192368	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1940397-1940428	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1943657-1943688	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1936444-1936475	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	2015481-2015512	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	2015481-2015512	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	2015481-2015512	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	2035237-2035268	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	2096669-2096700	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	2035268-2035299	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1943033-1943064	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1950917-1950948	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1940394-1940425	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1931550-1931581	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1995626-1995657	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	2022569-2022600	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	2012796-2012827	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	2035268-2035299	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1943033-1943064	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1937552-1937583	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1977783-1977814	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	2036264-2036295	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1943033-1943064	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1943033-1943064	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	2035258-2035289	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	2015486-2015517	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	2095618-2095649	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	2035290-2035321	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	2035091-2035122	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	2095618-2095649	9	0.719
NZ_CP022374_2	2.2\|2204061\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204061-2204092	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1940358-1940389	9	0.719
NZ_CP022374_1	1.3\|1815446\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815446-1815477	32	KT997863	Uncultured Mediterranean phage uvDeep-CGR2-KM21-C338, complete genome	203-234	10	0.688
NZ_CP022374_1	1.8\|1815448\|32\|NZ_CP022374\|PILER-CR	1815448-1815479	32	KT997863	Uncultured Mediterranean phage uvDeep-CGR2-KM21-C338, complete genome	203-234	10	0.688
NZ_CP022374_2	2.1\|2204000\|32\|NZ_CP022374\|CRISPRCasFinder	2204000-2204031	32	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	302396-302427	10	0.688

1. spacer 1.2|1815385|32|NZ_CP022374|CRISPRCasFinder,CRT matches to MH622937 (Myoviridae sp. isolate ctcg_2, complete genome) position: , mismatch: 4, identity: 0.875

tgtttcacgccttctctcctgcgcgggtgttc	CRISPR spacer
ctcatcacgccttctctcctgcgcgggtgttc	Protospacer
. . ****************************

2. spacer 1.7|1815387|32|NZ_CP022374|PILER-CR matches to MH622937 (Myoviridae sp. isolate ctcg_2, complete genome) position: , mismatch: 4, identity: 0.875

tgtttcacgccttctctcctgcgcgggtgttc	CRISPR spacer
ctcatcacgccttctctcctgcgcgggtgttc	Protospacer
. . ****************************

3. spacer 1.3|1815446|32|NZ_CP022374|CRISPRCasFinder,CRT matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 7, identity: 0.781

agcctc----ctcagccaccacgcgctgtctcacgc	CRISPR spacer
----tcgacgctcagcgaccacgcgctgtcgcacga	Protospacer
    **    ****** ************* ****

4. spacer 1.5|1815568|32|NZ_CP022374|CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 7, identity: 0.781

---tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
cagcgccta---ccagattgagggcgccacccagg	Protospacer
   .***.*   *** *************** ***

5. spacer 1.5|1815568|32|NZ_CP022374|CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.781

---tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
cagcgccta---ccagattgagggcgccacccagg	Protospacer
   .***.*   *** *************** ***

6. spacer 1.5|1815568|32|NZ_CP022374|CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.781

---tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
cagcgccta---ccagattgagggcgccacccagg	Protospacer
   .***.*   *** *************** ***

7. spacer 1.8|1815448|32|NZ_CP022374|PILER-CR matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 7, identity: 0.781

agcctc----ctcagccaccacgcgctgtctcacgc	CRISPR spacer
----tcgacgctcagcgaccacgcgctgtcgcacga	Protospacer
    **    ****** ************* ****

8. spacer 1.10|1815570|32|NZ_CP022374|PILER-CR matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 7, identity: 0.781

---tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
cagcgccta---ccagattgagggcgccacccagg	Protospacer
   .***.*   *** *************** ***

9. spacer 1.10|1815570|32|NZ_CP022374|PILER-CR matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.781

---tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
cagcgccta---ccagattgagggcgccacccagg	Protospacer
   .***.*   *** *************** ***

10. spacer 1.10|1815570|32|NZ_CP022374|PILER-CR matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.781

---tgcccatccccatattgagggcgccaccaagg	CRISPR spacer
cagcgccta---ccagattgagggcgccacccagg	Protospacer
   .***.*   *** *************** ***

11. spacer 1.2|1815385|32|NZ_CP022374|CRISPRCasFinder,CRT matches to NC_006949 (Enterobacteria phage ES18, complete genome) position: , mismatch: 8, identity: 0.75

tgtttcac---gccttctctcctgcgcgggtgttc	CRISPR spacer
---ctcgcttggctttctcttctgcgcgggtgtta	Protospacer
   .**.*   **.******.*************

12. spacer 1.2|1815385|32|NZ_CP022374|CRISPRCasFinder,CRT matches to AY736146 (Salmonella typhimurium bacteriophage ES18, complete sequence) position: , mismatch: 8, identity: 0.75

tgtttcac---gccttctctcctgcgcgggtgttc	CRISPR spacer
---ctcgcttggctttctcttctgcgcgggtgtta	Protospacer
   .**.*   **.******.*************

13. spacer 1.3|1815446|32|NZ_CP022374|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcctcctcagccaccacgcgctgtctcacgc	CRISPR spacer
cgcctccccggccaccacgcgctggaacaccg	Protospacer
 ******.*.**************   ***

14. spacer 1.7|1815387|32|NZ_CP022374|PILER-CR matches to NC_006949 (Enterobacteria phage ES18, complete genome) position: , mismatch: 8, identity: 0.75

tgtttcac---gccttctctcctgcgcgggtgttc	CRISPR spacer
---ctcgcttggctttctcttctgcgcgggtgtta	Protospacer
   .**.*   **.******.*************

15. spacer 1.7|1815387|32|NZ_CP022374|PILER-CR matches to AY736146 (Salmonella typhimurium bacteriophage ES18, complete sequence) position: , mismatch: 8, identity: 0.75

tgtttcac---gccttctctcctgcgcgggtgttc	CRISPR spacer
---ctcgcttggctttctcttctgcgcgggtgtta	Protospacer
   .**.*   **.******.*************

16. spacer 1.8|1815448|32|NZ_CP022374|PILER-CR matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

agcctcctcagccaccacgcgctgtctcacgc	CRISPR spacer
cgcctccccggccaccacgcgctggaacaccg	Protospacer
 ******.*.**************   ***

17. spacer 2.7|2204366|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

---aggcattggcctgtgccggtgtgcggctcatg	CRISPR spacer
tccaga---tcgcctgtgccggcgtgcgggtcatt	Protospacer
   **.   * ***********.****** ****

18. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

19. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

20. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

21. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

22. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

23. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

24. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

25. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

26. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

27. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

28. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

29. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcatc	Protospacer
**.***********.********* . .*  .

30. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

31. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

32. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

33. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

34. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

35. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

36. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

37. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

38. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

39. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

40. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

41. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

42. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

43. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

44. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

45. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

46. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

47. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

48. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

49. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

50. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

51. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

52. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

53. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

54. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

55. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

56. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

57. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

58. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

59. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

60. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

61. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

62. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

63. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

64. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

65. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

66. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

67. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

68. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

69. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

70. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

71. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

72. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

73. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

74. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

75. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

76. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

77. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

78. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

79. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

80. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

81. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

82. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

83. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

84. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

85. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

86. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

87. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

88. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

89. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

90. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

91. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

92. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

93. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

94. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

95. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

96. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

97. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

98. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

99. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

100. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

101. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

102. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccgcttcgtgttcgcctcgtc	Protospacer
**.***********.********* . .*  .

103. spacer 2.2|2204061|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtggcgtgcgccgtttcgtgttcctgcctat	CRISPR spacer
cgcggcgtgcgccggttcgtgttcgcttcgtc	Protospacer
**.*********** ********* . .*  .

104. spacer 1.3|1815446|32|NZ_CP022374|CRISPRCasFinder,CRT matches to KT997863 (Uncultured Mediterranean phage uvDeep-CGR2-KM21-C338, complete genome) position: , mismatch: 10, identity: 0.688

agcctcctcagccaccacgcgctgtctcacgc	CRISPR spacer
gtatggatcagccaccacgcgcagtctaacgg	Protospacer
.  .   *************** **** ***

105. spacer 1.8|1815448|32|NZ_CP022374|PILER-CR matches to KT997863 (Uncultured Mediterranean phage uvDeep-CGR2-KM21-C338, complete genome) position: , mismatch: 10, identity: 0.688

agcctcctcagccaccacgcgctgtctcacgc	CRISPR spacer
gtatggatcagccaccacgcgcagtctaacgg	Protospacer
.  .   *************** **** ***

106. spacer 2.1|2204000|32|NZ_CP022374|CRISPRCasFinder matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ccaacgagcacgaccttatttacggagtcagc	CRISPR spacer
tcttaaagcacaaccttacttacggagtcgaa	Protospacer
.*   .*****.******.**********..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

350366 : 358224

Burkholderia_phage(16.67%)

integrase

attL 348235:348248|attR 354921:354934

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
348235:348248	attL	NA	NA	NA	NA
WP_089178477.1\|350366_351476_-\|integrase	tyrosine-type recombinase/integrase	K4PAZ9	Burkholderia_phage	3.9e-19	27.2
WP_089178480.1\|352269_352638_-	hypothetical protein	F8TUU2	EBPR_podovirus	6.8e-05	44.0
WP_089178481.1\|352634_352820_-	hypothetical protein	NA	NA	NA	NA
WP_089178482.1\|352816_353215_-	hypothetical protein	NA	NA	NA	NA
WP_089178483.1\|353211_353391_-	hypothetical protein	NA	NA	NA	NA
WP_089178484.1\|353584_354034_-	hypothetical protein	NA	NA	NA	NA
WP_089178485.1\|354030_354435_-	hypothetical protein	NA	NA	NA	NA
WP_089178486.1\|354431_355022_-	3'-5' exonuclease	A0A1W6DWR2	Sphingobium_phage	3.2e-28	38.9
354921:354934	attR	NA	NA	NA	NA
WP_089178487.1\|355018_356017_-	hypothetical protein	A0A2I7RQF1	Vibrio_phage	3.6e-24	37.2
WP_089178488.1\|356016_356919_-	hypothetical protein	A0A2D1G8R5	Mycobacterium_phage	7.7e-42	39.1
WP_123809119.1\|356918_357113_-	hypothetical protein	NA	NA	NA	NA
WP_089178489.1\|357109_357430_-	hypothetical protein	NA	NA	NA	NA
WP_089178490.1\|357508_357745_-	hypothetical protein	NA	NA	NA	NA
WP_089178491.1\|357744_358224_-	hypothetical protein	I7HBC8	Xanthomonas_virus	1.4e-05	56.4

DBSCAN-SWA_2

547904 : 557142

Rhodobacter_phage(40.0%)

head,capsid,tail,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089178617.1\|547904_549125_-\|tail	phage tail protein	NA	NA	NA	NA
WP_089178618.1\|549192_549639_-	hypothetical protein	NA	NA	NA	NA
WP_089178619.1\|549635_550076_-	hypothetical protein	NA	NA	NA	NA
WP_089178620.1\|550075_550399_-	hypothetical protein	NA	NA	NA	NA
WP_089178621.1\|550398_551073_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_089178622.1\|551112_551361_-	hypothetical protein	NA	NA	NA	NA
WP_089178623.1\|551362_552712_-\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.3e-64	37.2
WP_089178624.1\|552712_553756_-	S49 family peptidase	I3ULZ8	Rhodobacter_phage	4.4e-65	46.9
WP_089178625.1\|553673_554951_-\|portal	phage portal protein	I3ULZ7	Rhodobacter_phage	5.9e-112	50.0
WP_089178626.1\|554953_556678_-\|terminase	terminase large subunit	A0A141GEV8	Brucella_phage	5.6e-150	49.6
WP_063353594.1\|556680_557142_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	4.7e-19	32.9

DBSCAN-SWA_3

604598 : 624855

Aeromonas_phage(33.33%)

terminase,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089178654.1\|604598_606053_+\|terminase	phage terminase large subunit	A0A1X9SGU8	Bradyrhizobium_phage	3.2e-106	46.0
WP_089178655.1\|606049_607102_-	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_089179883.1\|607348_608725_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	3.5e-86	44.0
WP_089178656.1\|608725_609727_+	DUF2213 domain-containing protein	A0A2R3UAL3	Myoviridae_environmental_samples	9.8e-30	36.4
WP_063353635.1\|609765_610266_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.5e-31	48.1
WP_089178657.1\|610265_611303_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.3e-77	46.4
WP_089178658.1\|611349_611667_+	hypothetical protein	H9C0V9	Aeromonas_phage	3.5e-10	38.4
WP_089178659.1\|611703_612210_+	DUF4054 domain-containing protein	H9C0W0	Aeromonas_phage	3.2e-13	44.0
WP_063353638.1\|612200_612581_+	hypothetical protein	NA	NA	NA	NA
WP_089178660.1\|612541_613114_+	hypothetical protein	NA	NA	NA	NA
WP_089178661.1\|613132_614287_+	DUF3383 family protein	H9C0W5	Aeromonas_phage	3.3e-29	34.2
WP_089178662.1\|614289_614727_+	hypothetical protein	NA	NA	NA	NA
WP_006117080.1\|614766_615222_+	hypothetical protein	NA	NA	NA	NA
WP_162870674.1\|615257_615407_+	hypothetical protein	NA	NA	NA	NA
WP_089178663.1\|615391_616429_+	hypothetical protein	NA	NA	NA	NA
WP_089178664.1\|616464_617178_+	hypothetical protein	NA	NA	NA	NA
WP_006117084.1\|617174_617495_+	hypothetical protein	A0A191ZDK0	Acinetobacter_phage	2.4e-06	35.1
WP_089179884.1\|617491_618418_+	hypothetical protein	Q2NP99	Xanthomonas_phage	3.5e-13	29.4
WP_089178665.1\|618414_619104_+\|plate	baseplate assembly protein	A0A2R3UAK1	Myoviridae_environmental_samples	6.3e-36	45.3
WP_006117087.1\|619115_619469_+	hypothetical protein	NA	NA	NA	NA
WP_089178666.1\|619455_620691_+	hypothetical protein	A0A2R3UAL9	Myoviridae_environmental_samples	7.3e-59	38.5
WP_063353648.1\|620690_621269_+	DUF2612 domain-containing protein	Q6UIZ7	Burkholderia_virus	1.3e-29	38.6
WP_089178667.1\|621276_622374_+\|tail	phage tail protein	A0A077KC23	Edwardsiella_phage	3.8e-11	33.8
WP_006117091.1\|622380_622950_+	hypothetical protein	NA	NA	NA	NA
WP_035354323.1\|623073_623520_+	hypothetical protein	NA	NA	NA	NA
WP_089178668.1\|623592_624855_+	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	7.2e-30	38.7

DBSCAN-SWA_4

1532919 : 1586530

Paenibacillus_phage(14.29%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012812328.1\|1532919_1534170_-\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA
WP_089179917.1\|1534292_1535055_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.0e-12	32.6
WP_123809132.1\|1535045_1535261_-	hypothetical protein	NA	NA	NA	NA
WP_089179066.1\|1535505_1536438_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_089179067.1\|1536735_1537065_+	hypothetical protein	NA	NA	NA	NA
WP_089179068.1\|1537218_1539636_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_116100343.1\|1540228_1541326_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003618898.1\|1541509_1542166_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_089179070.1\|1542303_1543065_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_089179071.1\|1543096_1543549_+	SRPBCC family protein	NA	NA	NA	NA
WP_089179072.1\|1543545_1544259_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_089179924.1\|1544302_1545193_+	oxidoreductase	NA	NA	NA	NA
WP_089179073.1\|1545220_1545880_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_089179074.1\|1546084_1547011_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_089179075.1\|1547722_1548933_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.0e-97	63.7
WP_123809133.1\|1549503_1550019_-	DUF1176 domain-containing protein	NA	NA	NA	NA
WP_075624989.1\|1550059_1550620_-	carbonate dehydratase	NA	NA	NA	NA
WP_089179076.1\|1550637_1551801_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	3.0e-30	29.8
WP_089179077.1\|1551837_1553067_-	GTP-binding protein	NA	NA	NA	NA
WP_035362736.1\|1553080_1553590_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_020936737.1\|1553586_1554198_-	GTP cyclohydrolase I FolE	A0A088F7Y4	Vibrio_phage	1.4e-42	45.4
WP_020936738.1\|1554362_1554989_+	DUF1826 domain-containing protein	NA	NA	NA	NA
WP_020936739.1\|1554985_1555492_+	ferric/zinc uptake regulator family protein np20	NA	NA	NA	NA
WP_035362735.1\|1555488_1557411_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	5.9e-116	37.3
WP_003626794.1\|1557407_1559141_+	ABC transporter ATP-binding protein/permease	G9BWD6	Planktothrix_phage	7.7e-06	25.2
WP_035352225.1\|1559247_1559592_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075624995.1\|1559588_1559759_+	metallothionein	NA	NA	NA	NA
WP_014106242.1\|1560361_1560772_-\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
WP_010511771.1\|1560772_1560997_-	hypothetical protein	NA	NA	NA	NA
WP_052051562.1\|1561176_1561596_+	hypothetical protein	NA	NA	NA	NA
WP_014106240.1\|1561821_1562718_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_052051561.1\|1562767_1563424_-	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A1X6WG33	Pacmanvirus	2.6e-15	38.0
WP_014106238.1\|1563617_1564727_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_014106237.1\|1564922_1565810_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_048851167.1\|1566142_1566754_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_035352878.1\|1567026_1568514_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_035352875.1\|1568513_1571657_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_052051560.1\|1571681_1572812_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014106232.1\|1573113_1573731_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_035352921.1\|1574105_1574702_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_089179078.1\|1574756_1575311_-	hypothetical protein	NA	NA	NA	NA
WP_089178403.1\|1575335_1576415_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_089179079.1\|1576465_1576972_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014106229.1\|1577134_1577836_+	pirin family protein	NA	NA	NA	NA
WP_035382358.1\|1578066_1579518_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_035382357.1\|1579504_1580578_-	HlyD family secretion protein	NA	NA	NA	NA
WP_035382356.1\|1580592_1582230_-	MFS transporter	NA	NA	NA	NA
WP_164076300.1\|1582440_1583355_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014106224.1\|1583562_1584768_+	MFS transporter	NA	NA	NA	NA
WP_014106223.1\|1584902_1585265_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_123809134.1\|1585579_1585681_+	hypothetical protein	NA	NA	NA	NA
WP_035378536.1\|1585693_1586530_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2293939 : 2354314

Burkholderia_virus(28.57%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089179410.1\|2293939_2294350_-\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
WP_089179411.1\|2295042_2295264_+	hypothetical protein	NA	NA	NA	NA
WP_089179412.1\|2295281_2295563_+	hypothetical protein	NA	NA	NA	NA
WP_123809144.1\|2295471_2295753_-	hypothetical protein	NA	NA	NA	NA
WP_162870701.1\|2296146_2297034_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_089179948.1\|2297290_2299663_+	TonB-dependent receptor	NA	NA	NA	NA
WP_089179414.1\|2299666_2300614_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_089179949.1\|2300625_2301774_+	phosphotransferase	NA	NA	NA	NA
WP_089179415.1\|2301779_2302676_+	sulfurtransferase	NA	NA	NA	NA
WP_164076293.1\|2302712_2303213_+	nicotinamide mononucleotide transporter	NA	NA	NA	NA
WP_123809145.1\|2304792_2305002_+	hypothetical protein	S5WIU1	Leptospira_phage	4.9e-08	44.4
WP_089179419.1\|2305221_2305644_-	hypothetical protein	NA	NA	NA	NA
WP_089179420.1\|2305640_2306060_-	hypothetical protein	NA	NA	NA	NA
WP_089179421.1\|2306061_2307651_-	cysteine desulfurase	Q2XUY6	environmental_halophage	4.6e-90	40.7
WP_089179422.1\|2307634_2309014_-	cyclic nucleotide-binding protein	A0A2K9L2D2	Tupanvirus	1.4e-31	33.6
WP_089179423.1\|2309248_2310112_-	hypothetical protein	NA	NA	NA	NA
WP_162870699.1\|2310423_2311071_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_089179425.1\|2313620_2314091_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_089179950.1\|2314190_2314559_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_089179426.1\|2314598_2315045_+	DUF1772 domain-containing protein	NA	NA	NA	NA
WP_089179951.1\|2315495_2316212_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_162870698.1\|2316328_2316484_+	hypothetical protein	NA	NA	NA	NA
WP_162870697.1\|2316846_2317161_+\|transposase	transposase	NA	NA	NA	NA
WP_089179953.1\|2317532_2318237_-	VIT family protein	NA	NA	NA	NA
WP_089179428.1\|2318370_2319723_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_089179429.1\|2319719_2320391_-	response regulator transcription factor	NA	NA	NA	NA
WP_089179430.1\|2320390_2323465_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_089179431.1\|2323464_2324619_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_089179432.1\|2324615_2325851_-	TolC family protein	NA	NA	NA	NA
WP_089179433.1\|2325869_2326340_-	hypothetical protein	NA	NA	NA	NA
WP_012812328.1\|2326671_2327922_-\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA
WP_116100258.1\|2327980_2328097_-	hypothetical protein	NA	NA	NA	NA
WP_089179434.1\|2328884_2329391_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_089179435.1\|2329466_2330183_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_162870744.1\|2330182_2330482_+	AzlD family protein	NA	NA	NA	NA
WP_162870696.1\|2330496_2330649_+	hypothetical protein	NA	NA	NA	NA
WP_150176195.1\|2331605_2332358_+	LuxR family transcriptional regulator	A0A1I9KF49	Aeromonas_phage	2.7e-08	28.9
WP_089179438.1\|2332490_2333408_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_089179440.1\|2334144_2334876_+	hypothetical protein	NA	NA	NA	NA
WP_116100255.1\|2335059_2335578_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_089179441.1\|2335689_2336655_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_089179442.1\|2336673_2338185_-	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_089179444.1\|2339374_2339668_-	prevent-host-death protein	NA	NA	NA	NA
WP_162870695.1\|2340390_2341281_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.1e-93	62.3
WP_089179446.1\|2341369_2342401_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_089179447.1\|2342711_2343056_-\|transposase	transposase	B6ETC4	Enterobacteria_phage	9.8e-22	52.4
WP_116100254.1\|2343107_2343290_-	hypothetical protein	NA	NA	NA	NA
WP_162870743.1\|2343602_2346101_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_089179449.1\|2346291_2347296_-	DUF4880 domain-containing protein	NA	NA	NA	NA
WP_089179450.1\|2347403_2347940_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_061471297.1\|2348478_2348844_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_089179451.1\|2348840_2349359_+	RES domain-containing protein	NA	NA	NA	NA
WP_089179452.1\|2349508_2350207_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_089179453.1\|2350205_2350901_+	hypothetical protein	NA	NA	NA	NA
WP_089179454.1\|2351574_2352420_-	squalene/phytoene synthase family protein	NA	NA	NA	NA
WP_089179075.1\|2353103_2354314_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.0e-97	63.7

DBSCAN-SWA_6

2641430 : 2671271

Paenibacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089179587.1\|2641430_2642357_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	1.7e-28	34.9
WP_162870684.1\|2642786_2642960_+	hypothetical protein	NA	NA	NA	NA
WP_162870683.1\|2642991_2643969_+	hypothetical protein	NA	NA	NA	NA
WP_089179590.1\|2644286_2645318_-	hypothetical protein	NA	NA	NA	NA
WP_089179591.1\|2645310_2645763_-	hypothetical protein	NA	NA	NA	NA
WP_089179592.1\|2645866_2646553_+	hypothetical protein	NA	NA	NA	NA
WP_089179968.1\|2646567_2647329_+	hypothetical protein	NA	NA	NA	NA
WP_089179593.1\|2647336_2648413_+	hypothetical protein	NA	NA	NA	NA
WP_089179594.1\|2648409_2649012_+	hypothetical protein	NA	NA	NA	NA
WP_123809150.1\|2650120_2652118_+	hypothetical protein	NA	NA	NA	NA
WP_089179597.1\|2652746_2653979_+	hypothetical protein	NA	NA	NA	NA
WP_089179598.1\|2654287_2655127_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	1.2e-07	30.9
WP_063353330.1\|2655732_2656092_+\|transposase	transposase	NA	NA	NA	NA
WP_020944072.1\|2656088_2656436_+	IS66 family insertion sequence element accessory protein TnpB	S5WJH4	Leptospira_phage	3.5e-11	45.2
WP_089179599.1\|2656499_2658110_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	5.3e-110	42.1
WP_089179600.1\|2659132_2659474_-	hypothetical protein	NA	NA	NA	NA
WP_089179601.1\|2659814_2660450_-	hypothetical protein	NA	NA	NA	NA
WP_012812328.1\|2660677_2661928_+\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA
WP_089179917.1\|2662120_2662883_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.0e-12	32.6
WP_089179602.1\|2664013_2665150_+	Fic family protein	D7RWK9	Brochothrix_phage	2.2e-09	26.4
WP_089179603.1\|2665668_2666601_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_089179604.1\|2666751_2667444_+	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_089179605.1\|2667440_2667950_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_089179606.1\|2668045_2668882_+	alpha/beta hydrolase	A0A0A0RRH5	Mycobacterium_phage	1.3e-11	29.5
WP_089179607.1\|2669261_2669774_-	hypothetical protein	NA	NA	NA	NA
WP_089179917.1\|2670507_2671271_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.0e-12	32.6

DBSCAN-SWA_7

2793927 : 2804831

Escherichia_phage(33.33%)

head,capsid,protease,tail,integrase,terminase,portal

attL 2791089:2791104|attR 2808904:2808919

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2791089:2791104	attL	NA	NA	NA	NA
WP_089179690.1\|2793927_2795172_-\|tail	phage tail protein	NA	NA	NA	NA
WP_089179691.1\|2795214_2795628_-	hypothetical protein	NA	NA	NA	NA
WP_089179692.1\|2795624_2796065_-	hypothetical protein	NA	NA	NA	NA
WP_089179693.1\|2796064_2796388_-	hypothetical protein	NA	NA	NA	NA
WP_089179694.1\|2796387_2797032_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_089179695.1\|2797034_2798285_-\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	1.3e-42	29.8
WP_089179696.1\|2798335_2799079_-\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	2.8e-37	45.0
WP_089179697.1\|2799085_2800396_-\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	5.7e-54	33.3
WP_089179698.1\|2800383_2802174_-\|terminase	terminase large subunit	H6WZK9	Escherichia_phage	1.6e-171	54.3
WP_089179699.1\|2802163_2802760_-\|terminase	terminase	NA	NA	NA	NA
WP_061342381.1\|2802959_2803289_-	HNH endonuclease	NA	NA	NA	NA
WP_019089289.1\|2803285_2803918_-	DUF3164 family protein	A0A1B0T6G5	Thiobacimonas_phage	8.0e-46	45.8
WP_089179700.1\|2803955_2804831_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.9e-08	28.4
2808904:2808919	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3077954 : 3103270

Streptococcus_phage(22.22%)

head,capsid,tail,integrase,terminase,portal,tRNA

attL 3082998:3083012|attR 3109972:3109986

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089179831.1\|3077954_3079835_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_089179832.1\|3079856_3081188_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_089179833.1\|3081349_3081814_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.7e-21	40.8
WP_089179834.1\|3081860_3082574_-	hypothetical protein	NA	NA	NA	NA
WP_006115708.1\|3082827_3083271_+	hypothetical protein	NA	NA	NA	NA
3082998:3083012	attL	NA	NA	NA	NA
WP_161596118.1\|3083574_3084360_-\|integrase	tyrosine-type recombinase/integrase	A0A068CCA6	Rhizobium_phage	6.1e-19	28.4
WP_100070302.1\|3084449_3084713_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_035351009.1\|3084729_3085230_-	hypothetical protein	NA	NA	NA	NA
WP_089179836.1\|3085226_3085799_-	hypothetical protein	NA	NA	NA	NA
WP_089179837.1\|3086099_3086555_-	hypothetical protein	NA	NA	NA	NA
WP_089179838.1\|3086551_3086899_-	hypothetical protein	NA	NA	NA	NA
WP_089178632.1\|3086874_3087171_-	hypothetical protein	NA	NA	NA	NA
WP_123809126.1\|3087167_3087395_-	hypothetical protein	NA	NA	NA	NA
WP_089179839.1\|3087391_3087934_-	hypothetical protein	NA	NA	NA	NA
WP_089179840.1\|3087933_3088311_-	hypothetical protein	NA	NA	NA	NA
WP_035352102.1\|3088439_3088778_-	hypothetical protein	NA	NA	NA	NA
WP_123809155.1\|3088774_3089050_-	hypothetical protein	NA	NA	NA	NA
WP_035352104.1\|3089173_3089572_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_123809156.1\|3089898_3090225_+	hypothetical protein	NA	NA	NA	NA
WP_035351170.1\|3090221_3090746_+	hypothetical protein	NA	NA	NA	NA
WP_035351168.1\|3090719_3090962_-	hypothetical protein	NA	NA	NA	NA
WP_035351165.1\|3091059_3091530_+	hypothetical protein	A0A0A8IL22	Aurantimonas_phage	2.4e-07	35.9
WP_035351162.1\|3091519_3091717_+	hypothetical protein	NA	NA	NA	NA
WP_035351160.1\|3091703_3091889_+	hypothetical protein	NA	NA	NA	NA
WP_123809157.1\|3091866_3092301_+	hypothetical protein	NA	NA	NA	NA
WP_089179843.1\|3092297_3093326_+	hypothetical protein	A0A0U4B0G9	Pseudomonas_phage	8.5e-13	35.8
WP_089179844.1\|3093273_3095202_+	ATP-binding protein	NA	NA	NA	NA
WP_089178628.1\|3095461_3095893_+	hypothetical protein	NA	NA	NA	NA
WP_089178627.1\|3096007_3096328_+	HNH endonuclease	NA	NA	NA	NA
WP_063353594.1\|3096526_3096988_+\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	4.7e-19	32.9
WP_089178626.1\|3096990_3098715_+\|terminase	terminase large subunit	A0A141GEV8	Brucella_phage	5.6e-150	49.6
WP_089178625.1\|3098717_3099995_+\|portal	phage portal protein	I3ULZ7	Rhodobacter_phage	5.9e-112	50.0
WP_089178624.1\|3099912_3100956_+	S49 family peptidase	I3ULZ8	Rhodobacter_phage	4.4e-65	46.9
WP_089179845.1\|3100956_3102306_+\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	9.7e-65	37.2
WP_089178622.1\|3102307_3102556_+	hypothetical protein	NA	NA	NA	NA
WP_089178621.1\|3102595_3103270_+\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
3109972:3109986	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP022374.1|WP_035351162.1|3091519_3091717_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP022374.1|WP_035351162.1|3091519_3091717_+|hypothetical-protein

3091519_3091717_+

65 aa aa

3077954-3103270

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP022374_1	TypeI-E	1.1\|1815324\|32\|NZ_CP022374\|CRISPRCasFinder,CRT	1815324-1815355	32	3095458-3095427	0
NZ_CP022374_1	TypeI-E	1.6\|1815326\|32\|NZ_CP022374\|PILER-CR	1815326-1815357	32	3095458-3095427	0
NZ_CP022374_2	Orphan	2.8\|2204427\|32\|NZ_CP022374\|CRISPRCasFinder,PILER-CR,CRT	2204427-2204458	32	3086166-3086197	2

1. spacer 1.1|1815324|32|NZ_CP022374|CRISPRCasFinder,CRT matches to NZ_CP022374 position: 3095458-3095427, mismatch: 0

tagcgaggttcctgcggttcccatgtggttcc	CRISPR spacer
tagcgaggttcctgcggttcccatgtggttcc	Protospacer
********************************

2. spacer 1.6|1815326|32|NZ_CP022374|PILER-CR matches to NZ_CP022374 position: 3095458-3095427, mismatch: 0

tagcgaggttcctgcggttcccatgtggttcc	CRISPR spacer
tagcgaggttcctgcggttcccatgtggttcc	Protospacer
********************************

3. spacer 2.8|2204427|32|NZ_CP022374|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022374 position: 3086166-3086197, mismatch: 2

ggtttgtatggccgccaaaatcccgcgtgtgg	CRISPR spacer
ggtttgtatggccgcaagaatcccgcgtgtgg	Protospacer
*************** *.**************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022374

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information