CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	0 crisprs	cas14j,csa3	0	0	2
NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	1 crisprs	csa3,cas14j	0	1	0
NZ_CP017060	Bacillus cereus strain FORC_047 chromosome, complete genome	4 crisprs	cas3,cas14k,csa3,WYL,c2c10_CAS-V-U3,DinG,cas14j,DEDDh,c2c9_V-U4	4	3	8

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017060_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017060_1

1081179-1081288

Orphan

Consensus_repeat	Method
GGTTTAAATACGTTAAATAGTAAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017060_1

>merge|NZ_CP017060|1|1081179-1081288|CRISPRCasFinder
GGTTTAAATACGTTAAATAGTAAAACAGGTGAGATGCAGACAGGTATAGGGAAATTGCAAGATGGCTCCGGAAAAGTAACAGGCGGTTTAAATACGTTAAATAGCAAAAC

>NZ_CP017060|1|1|1081179-1081288|CRISPRCasFinder
GGTTTAAATACGTTAAATAGTAAAAC	AGGTGAGATGCAGACAGGTATAGGGAAATTGCAAGATGGCTCCGGAAAAGTAACAGGC
GGTTTAAATACGTTAAATAGCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017060.1\|WP_089170565.1\|1073106_1075473_+\|chitobiase/beta-hexosaminidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225249
NZ_CP017060.1\|WP_089170568.1\|1083196_1083412_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_000963381.1\|1079660_1080233_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017060.1\|WP_089170563.1\|1070034_1071456_+\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|237009
NZ_CP017060.1\|WP_089170564.1\|1071512_1072865_-\|DUF4026-domain-containing-protein	unknown	unknown	gnl\|CDD\|338635
NZ_CP017060.1\|WP_089170571.1\|1087100_1088090_+\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
NZ_CP017060.1\|WP_053565064.1\|1075959_1076805_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_000103715.1\|1084971_1085985_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP017060.1\|WP_053565068.1\|1065724_1067842_+\|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl\|CDD\|273955
NZ_CP017060.1\|WP_000567010.1\|1086024_1086153_-\|YhfH-family-protein	unknown	unknown	gnl\|CDD\|379490
NZ_CP017060.1\|WP_089170570.1\|1084267_1084777_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP017060.1\|WP_000140298.1\|1083448_1083754_+\|DUF2087-domain-containing-protein	unknown	unknown	gnl\|CDD\|226378
NZ_CP017060.1\|WP_000184503.1\|1077035_1077437_+\|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367747
NZ_CP017060.1\|WP_000784671.1\|1086356_1087091_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293802
NZ_CP017060.1\|WP_071714122.1\|1088229_1088658_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_089170572.1\|1088819_1090352_+\|fatty-acid--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|236072
NZ_CP017060.1\|WP_089170562.1\|1069079_1070015_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|183526
NZ_CP017060.1\|WP_089170566.1\|1077439_1079389_+\|M56-family-metallopeptidase	unknown	unknown	gnl\|CDD\|310280
NZ_CP017060.1\|WP_157676041.1\|1075605_1075905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_089170569.1\|1083780_1084134_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|379617

Protein	Function_ID	Function_description	E-value
NZ_CP017060.1\|WP_089170565.1\|1073106_1075473_+\|chitobiase/beta-hexosaminidase-C-terminal-domain-containing-protein	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	6.93014e-73
NZ_CP017060.1\|WP_000963381.1\|1079660_1080233_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.571e-14
NZ_CP017060.1\|WP_089170563.1\|1070034_1071456_+\|protoporphyrinogen-oxidase	gnl\|CDD\|237009	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed.	0
NZ_CP017060.1\|WP_089170564.1\|1071512_1072865_-\|DUF4026-domain-containing-protein	gnl\|CDD\|338635	pfam13218, DUF4026, Protein of unknown function (DUF4026). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 450 amino acids in length. The family is found in association with pfam10077.	5.01403e-175
NZ_CP017060.1\|WP_089170571.1\|1087100_1088090_+\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	1.02594e-138
NZ_CP017060.1\|WP_000103715.1\|1084971_1085985_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.56346e-114
NZ_CP017060.1\|WP_053565068.1\|1065724_1067842_+\|PBP1A-family-penicillin-binding-protein	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP017060.1\|WP_089170570.1\|1084267_1084777_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.51389e-15
NZ_CP017060.1\|WP_000140298.1\|1083448_1083754_+\|DUF2087-domain-containing-protein	gnl\|CDD\|226378	COG3860, COG3860, Uncharacterized protein conserved in bacteria [Function unknown].	1.18824e-23
NZ_CP017060.1\|WP_000184503.1\|1077035_1077437_+\|BlaI/MecI/CopY-family-transcriptional-regulator	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	6.07643e-46
NZ_CP017060.1\|WP_000784671.1\|1086356_1087091_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293802	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain. The tRNA maturase RNase Z (also known as tRNase Z or 3' tRNase) catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors. Two forms of RNase Z exist in eukaryotes, one long (ELAC2) and one short form (ELAC1), the former may have resulted from a duplication of the shorter enzyme. Only the short form exists in bacteria. Members of this bacterial subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.11413e-86
NZ_CP017060.1\|WP_089170572.1\|1088819_1090352_+\|fatty-acid--CoA-ligase-family-protein	gnl\|CDD\|236072	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP017060.1\|WP_089170562.1\|1069079_1070015_+\|ferrochelatase	gnl\|CDD\|183526	PRK12435, PRK12435, ferrochelatase; Provisional.	0
NZ_CP017060.1\|WP_089170566.1\|1077439_1079389_+\|M56-family-metallopeptidase	gnl\|CDD\|310280	pfam05569, Peptidase_M56, BlaR1 peptidase M56. Production of beta-Lactamase and penicillin-binding protein 2a (which mediate staphylococcal resistance to beta-lactam antibiotics) is regulated by a signal-transducing integral membrane protein and a transcriptional repressor. The signal transducer is a fusion protein with penicillin-binding and zinc metalloprotease domains. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. homologs to this peptidase domain, which corresponds to Merops family M56, are also found in a number of other bacterial genome sequences.	3.88268e-49
NZ_CP017060.1\|WP_000567010.1\|1086024_1086153_-\|YhfH-family-protein	gnl\|CDD\|379490	pfam14149, YhfH, YhfH-like protein. The YhfH-like protein family includes the B. subtilis YhfH protein, which is functionally uncharacterized. Its expression is repressed by the Spx paralogue MgsR, which regulates genes involved in stress response. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 53 amino acids in length.	3.52581e-13
NZ_CP017060.1\|WP_089170569.1\|1083780_1084134_-\|PH-domain-containing-protein	gnl\|CDD\|379617	pfam14470, bPH_3, Bacterial PH domain. Proteins in this family are distantly related to PH domains.	3.99454e-19

>NZ_CP017060.1|WP_000963381.1|1079660_1080233_+|TetR/AcrR-family-transcriptional-regulator
MAIDRKRSIIEAATKSFSAFGYKATTMDQVAKLANVGKGTIYTFFKNKEELFGEIISNLITEMKQVAESAIRSDVSFFENVHRALYSILEFRKEHQLMIKLIQEERDMGTKEVQEVMQQVDVEIVSVIQSYLKIAIEKGEISKCDPEITAFIMLRLYVSLIFDWEKNHEPLEKEKIAELFELYLLKGLSN
>NZ_CP017060.1|WP_089170566.1|1077439_1079389_+|M56-family-metallopeptidase
MIDTLINVYLPHFFDWLIETSLMASILVGFILCIKVLFRNKLTPRWQYMLWIVLMIRLLLPWSPDSSYSIYSLLSYSSSVSEVIPKNMPATENIVNIESDRKVELESNPKMVTKTSEPEVEVSSEKQTTFSLYKLALYVWLAGVIILAAITFLTNRRLYSYIKKQPDITDEQVITVFDRCKQSMKVKKAVSLRLAGKIASPTVFSFFRPKVLLSKKHMKVLNEQQLQYVFYHELAHIKRKDVAVNWIMYSLILLNWFNPILWYAYFCMREDQELACDAYALTFIDKEEQIAYGHTIITLLEHYSYQVPSLANLSRNKRTLKRRIVMIKKFQKKSYRLSLLGVIAIAAIAGGFLLNARITEGDERQKEKVVEKKQSKAAFEKAIETVLGTPENASREWGMSITSYKKNTDFLYLAEKNFTKEEFEQYVRLFKEAQEIHKKAMVKKNVPENYDGDTKEYKPERLKKADQERLATIEKTLKPLGDKLEKSLTYTIEEAKEHVPYQIKQPTYIPEGYELKREWADSYFGRDVELVIKSEYTKGKYGFTIYQSRMYMDGNVNGGKDPLHYMMPGVENLESYSLDGKGMVYNKSSHGEGKLRGLKMFVPAQGKNSEYQIVIVNDIFSRDTKIYEEIIDDELTKKEMEKILLSMSK
>NZ_CP017060.1|WP_000184503.1|1077035_1077437_+|BlaI/MecI/CopY-family-transcriptional-regulator
MTNQLPKISEAELEIMKVLWSNSPQTANEIIEELEDAMDWKPKTIRTLINRLVQKEAVSYHQDKGRMYAYYPLVSQDNYLQVETKSLLKRFCGAAFKPLLVNFLKEEKLSSEDINELKRILDEKTEENKRKDR
>NZ_CP017060.1|WP_053565064.1|1075959_1076805_-|hypothetical-protein
MMRALRLNIKQAFCNRVSLIIMFSGFVLICIYHYYYVIRYLGDAANGPISTDIKWIGFRGNEMDVYLLLMPVIASLPFSTSYNSDKSDGFKPFVSKEISLFSYSVTKYIVTFFCGGLLYTFPFILSLLFCKLTIPDGVPTAGSGIINDNGMFANLYETSPITYIAVYIGINFLFAGLMALLGLAASAWSQKDYMALLFPFATTSIPYVLLNTVLPTIGGAPIHLYDPRQPLHGMSPYILTIQCTFFLLVSLIMYIQGVKRDRKKYRRRLQRRERCRKAFQV
>NZ_CP017060.1|WP_157676041.1|1075605_1075905_+|hypothetical-protein
MQLQINGKLMNQFAIFFSTIVMLQFVADVTGLTSNLDITYNLINITASYITFSLAVIFTLTGARRELSKYAIVSLCLVVAIKAIYFVAVVILWGLAGTP
>NZ_CP017060.1|WP_089170565.1|1073106_1075473_+|chitobiase/beta-hexosaminidase-C-terminal-domain-containing-protein
MAVKKLLSVFLSFLLLLSFTGTLAQAEETASMSVEKAIQVFKQQGKTKGIVEGYIVGYTQSSSKYTKDPAKFDDTNVAIADSPNETNPDKIMPVQLPKGDVRTAVNVKDHPENIGKKVSLTGTLELYFSNPGLKSVTAYKFQGEGQNRVSDVVASPNGGEVAKGTAVTLTTNTEGATIYYTLDGSNPTNKSVRYNGQIIVNENSVVKAIAEKEGLTSSAISTFSFIILNNEQVRIHDIQGKSHMSPYNGKKVNNVEGVVTALDKNGFYIEDNQPDNDPATSEGIYVYKKDANVAVGDLIQVDGVVEEYVGPGYAERFETDLTTTEIKASRVAVIAKNQTLPAPIVLGENGVKIPDQIIDNDAFGLFDPNEDAIDFYESIEGMRVTMPTPKIITPQKNGNLYVTVKNGGDKIVTQYGTPLLDENQLNPERLSVKVPRDYVAKVGDTFTGDITGVVGYDYGSFRISPITELPAVVDGGFKQVGANIQPRLDKLTVATYNIENFSANKKETTDEKVKALAYSIKYNLKMPDIIGVEEMQDNNGSINDGTTDASLSAKRIIDAVLEIRGPKYEYVEIAPNNNQDGGAPGANIRVGFFYNPSRVKLAPVPKLLDKNVVRIGDENPLFESTRKPLAAEFTFQGQNIVVVANHLNSKLGDATPFGKVQPLVLKSEDKRIQLAQEVNHFVQGIQKKNTNAPVVVLGDMNDFEFSKPLKALEGTILKDMLNTVPKENRYTYIHEGNAQVLDHILVTNNIAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS
>NZ_CP017060.1|WP_089170564.1|1071512_1072865_-|DUF4026-domain-containing-protein
MEVQTETYRAAMNGTLERHFSDMIAVIPTRITIEQLKHRLEIIATKVDELKIVYSDETSLIVELHMGETVIPYELHIDEANDPEEYKMYNRQDSTIVDRNFEDVAFGTEIFTRTLFVGDVLDCFFQQLQFLWNLAPDLLFVIDSSAAMKVISRSYIEYHVENELLPDIPDLYVIHSVYEDDKDDEPTQYWFHTHGLLRAGVTEIELIIPNRISSYYGIGDLFQTFANNAVENGQVPMNEPIVIAHSQQGSIHTVAVPWEKGLSYIGHKTSMDQLSSIEDEEVKLQPIDAQNTFLGGMDARDEYHQSPSVLLFKFNTSEEYIESFFKEHEEATGLMFYKTNSETARMAYNAKNTFGYFSNIFHIEQSNEDFRFLAKFGVSYEEGKSEHMWFEMQNITEDFIQGILINEPYFIKDMSEGNSYHLDFDNLTEWVIYAGDAVIKPNNLYMFIGE
>NZ_CP017060.1|WP_089170563.1|1070034_1071456_+|protoporphyrinogen-oxidase
MRKKVVIVGGGITGLTAMYNLQKNLHEKNLPIDTLLIEASGKLGGKIQTVRKDGFTIERGPDSFLARKESAARLVKELGLGDELVNNQAGQSFILVNNRLHKMPNGSMMGIPTQITPFLFSGLFSPIGKLRAGFDLLMPRSKPVSDQSLGQFFRHRLGNEVVENLIEPLLSGIYAGDIDEMSLMSTFPQMYQIEQKHRSISLGMRTLAPKEEKAEPKKGMFQTVKTGLESIVKSLEAKMHEGTIIKGTRIEKIAKQGDGYTITLSNGKEIEADAIVVATSHKVLPSMFAQYKQFRFFRNIPSTSVANVALAFPKSAIQRDINGTGFVVSRNSDYTITACTWTHKKWPHTTPEGKTLLRCYVGRAGDEAVVEQTEEELVQLVLEDLRKTMDITEDPEFTIVSRWKEAMPQYTVGHNERMKKLTTFMEKELPGIYLAGSSYAGAGLPDCINQGEEAAKRVLSHLEKVIDAELIAQ
>NZ_CP017060.1|WP_089170562.1|1069079_1070015_+|ferrochelatase
MKKKIGLLVMAYGTPYKEEDIERYYTHIRRGRKPSPEMLEDLTERYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHMYLGLKHIEPFIEDAVKDMHNDGIQDAIALVLAPHYSTFSVKSYVGRAQEEAEKLGNLTIHGIDSWYKEPKFIQYWVDAVKGIYNGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPNQLNETADYIARGAEVANYAVGWQSAGNTPDPWIGPDVQDLTRELNEKHGYTSFVYAPVGFVAEHLEVLYDNDFECKVVTDEIGAKYYRPEMPNASDAFIDCLTDVVLKKKESVL
>NZ_CP017060.1|WP_053565068.1|1065724_1067842_+|PBP1A-family-penicillin-binding-protein
MKKVKWTLLGGVATFVVAIVLYKLIVLAGGYMMDEKQLVFHSSSRIVDQKGKEITKLYVENRELVPVEQIPKYVQQAFVAVEDSRFYEHQGIDYPSIFRALYKDTLAGEKVEGGSTITQQLAKNVFLTREKTFTRKLKEVAISLQLEQKYTKQQILEMYMNHIYFGHGAYGIQAAAKLYFNKNVEDLTVEEGAMLAGLPKSPNGYSPYYSAEKSKERRDLVLSLMHKQGYLTAEESVRYQGKTIALYKNLDENELAYMPYIDMVIDEAARLYGLSHQEVLRGGYTFVVPMDEKIQKVAYNQFQDARNFPGKEEGAQGAFLLMDNRTGGIKAAIGGRKYVPRGFNRVFAKRQPGSVLKPLIVYAPALETKKYNPYSLLTNERNSFEGYEPRNYNHEYSKEMTMYDAILESANVPAVSLLNELGVEEGKQYLEKGNVHIADAGLSTALGGLKNGVSTFDLVKMYRSFLANGNIIEPHVIDKVLNRHGAVIGESPKVETKIFSKQTAWYMTKMLEGVVKEGTARVGVYNGALAGKTGTTSLPNDDKGARDMWFVGYTPNLVGAVWIGYDRTDKEHQLQGESASATKLFKKILTKANVEHKEKFMKPEGVETIGAPIRLRRIEDVKMKLSFSPFGLFKAKLSWTPLPDNRIMYRIYRVENGIHTHVSTVNGAGEYEEKFVNIFSKPSFYVVPYNTQTNREGEKSKVAKP
>NZ_CP017060.1|WP_089170568.1|1083196_1083412_+|hypothetical-protein
MIRGNLTYYFIVNPLIIFLVYALSPILFHKEKYTSMKDAIGILVSYYVLISGYYFIDILSERIKKNGKEKQ
>NZ_CP017060.1|WP_000140298.1|1083448_1083754_+|DUF2087-domain-containing-protein
MTESEMKFRDTTIRNFFDKEDRLKSIPGQKKKKLVLLEHLVSKLNAENQYTEKEINTFIKQYHDDFCTIRREFIVHRFMDREDNMYRINGREVWTKWEELK
>NZ_CP017060.1|WP_089170569.1|1083780_1084134_-|PH-domain-containing-protein
MNPILTAAKQLLHKEEKVLSTLKCSLTGYMITHKVPYPGMLLATNQRLLFFSQYKNTFIAEFDYEKILSIETKRRIFDKKIIFYYEDEYITLGYITSSNVKAFIDLLQRNSKTSTGL
>NZ_CP017060.1|WP_089170570.1|1084267_1084777_+|GNAT-family-N-acetyltransferase
MIRLVKESDAEAIMNIRKEIILSETTTKFFIVSPKKLPNDMNAEREKIRKSNEKGNLYIVYEVDGKVVGFLIFNRYELERLQHAGTMGMGIKEAYCNQGIGTKLIEFLISWAKGQKGLEKICLGVVSVNDRAIKVYKRMGFVEEGRQRKQIKYEDGSYGDDVLMGFYIE
>NZ_CP017060.1|WP_000103715.1|1084971_1085985_+|LacI-family-DNA-binding-transcriptional-regulator
MSTIEDVAKLAGLSRTTVSRVINNHPYVSDEKKKRVQLAMKHLGFVPNSAARRLRKQKTETIAVLVPRITNPFFSRFIEAIEIAASEHKYKLIICQTRYLPEKEMEYLQLLSTKQVDGIILCSLENPWEDVEPYLQHGPIVLCNEYIEEANIPTVKFDHAQGAYIAAKHVLDQGYRNLIFCRGNETKVVSQQRKMGFLRAITEKSRQVEAIDFLENAFSWEDGKRIFHEVLKDKKNPTAILAGGDEVAAGIISEAKRHNWSIPDDLAVIGFDNQILSQITEPGITTIEQPIDEMARKVVDLMMDKIHTKNYRKKELYEFELELLVKGSTMKDKMLLA
>NZ_CP017060.1|WP_000567010.1|1086024_1086153_-|YhfH-family-protein
MIDQPMEFFRNLPTKTCAHCGKEIDEQHEAYHNKCDDCVHEE
>NZ_CP017060.1|WP_000784671.1|1086356_1087091_+|MBL-fold-metallo-hydrolase
MKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATTRQLPELPIYGHTFDENGFHSLTHEPHTKGIAYNPEETLQVGPFSISFLKTVHPVTCFAMRITAGDDAVVYSADSSYIPEFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPSDLVTEAKQIFSGHITLAHSGYVWNS
>NZ_CP017060.1|WP_089170571.1|1087100_1088090_+|lipoate--protein-ligase
MLFIDNRGITDPRINLAIEEYCVKNLDINETYLLFYINEPSIIIGKNQNTVEEINADYVKEKGIHVVRRLSGGGAVYHDLGNLNFSFITKDDGDSFSNFKKFTEPVTKALGKLGVNAELSGRNDILAEGRKISGNAQFSTKGRMFSHGTLLFDSEIDHVVSALKVKMDKIQSKGIKSIRSRVANITEFLNEEMTTEEFRQLLLETIFEGETEIPTYELTENDWKEIHKLSEERYQNWDWNYGKSPKFNLQHSHRFPVGQVDVRLEVKKGTVTECKIYGDFFGSLDVHDIEERLTGIQFDKDAFTAALEGVDIARYFGNITTEDFLHLFF
>NZ_CP017060.1|WP_071714122.1|1088229_1088658_+|hypothetical-protein
MKRVIHIVILLGFVIGIAACNSETSSSRTLLSIGKPARDNVIYFTHTDNKRKIHNIQDMFQNKKWKRNETFSTVNKTPDVVLSIDENNKGLPTLYVTVYFHENGADVLNLYGEYTNLNKEELEKLKEKMSAYYPKMIFGLVL
>NZ_CP017060.1|WP_089170572.1|1088819_1090352_+|fatty-acid--CoA-ligase-family-protein
MNLVQSLAETAKKKGDKPAYIFMDQSVSYDQLNKMVTRFSSNLAEMGIGKGDNVALVVGNSPHFLVGLYGTMKAGATVIPVNPIYTADEMHYILQNGDVKTIIVLDVLLPVIQSLTTRLPSLENIIICETSSDFNHTETEKMKTFTSFVGAGDLQYEGPELDEEDVAVILYTSGTTGKPKGAMLTHKNLYSNANDVASYLQFTADDRVVAALPMFHVFCLTVAVNAPIVNGATILMLPKFSPKEVFRICRTYEPTIFAGVPTMYNYLYLFEEASAEDVKTLRLCISGGASMPVALLQNFEKRFNVIVSEGYGLSEASPVTCFNPLDRPRKPGSIGTNIWHVENKIVNELGEEVPVGAVGELIVRGPNVMKGYYNAPEDTAATLKDGWLYTGDLAKMDEEGYFYIVDRKKDIVLVGGYNVYPREVEEVLYTHESVAEVVVIGVPDENLGEAVRAYVVLKQANVTEEELMHYCTLHLAKYKVPKSIEFLIELPKNTTGKLLRRALREKAMQV

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Crispr_ID: NZ_CP017060_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017060_2

1788533-1788608

Orphan

Consensus_repeat	Method
CAATTGTTTAACATATGTATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017060_2

>merge|NZ_CP017060|2|1788533-1788608|CRISPRCasFinder
CAATTGTTTAACATATGTATCGCTATGACATATGCAATTGAATGAAAGTGATGCAATTGTTTAACATATGTATCGC

>NZ_CP017060|2|2|1788533-1788608|CRISPRCasFinder
CAATTGTTTAACATATGTATCGC	TATGACATATGCAATTGAATGAAAGTGATG
CAATTGTTTAACATATGTATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017060.1\|WP_000789783.1\|1797978_1798209_-\|DUF896-domain-containing-protein	unknown	unknown	gnl\|CDD\|167247
NZ_CP017060.1\|WP_001017441.1\|1792071_1792743_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP017060.1\|WP_089170806.1\|1788103_1788415_-\|heavy-metal-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|105987
NZ_CP017060.1\|WP_000254901.1\|1776920_1778747_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|372624
NZ_CP017060.1\|WP_000162968.1\|1780542_1781751_+\|non-hemolytic-enterotoxin-NHE-subunit-B	unknown	unknown	gnl\|CDD\|368615
NZ_CP017060.1\|WP_000561074.1\|1797451_1797931_+\|cytochrome-c-biogenesis-protein-CcdC	unknown	unknown	gnl\|CDD\|377808
NZ_CP017060.1\|WP_089170805.1\|1786547_1787132_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017060.1\|WP_065382478.1\|1787195_1787819_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_CP017060.1\|WP_089170801.1\|1775353_1776298_+\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|183829
NZ_CP017060.1\|WP_089170803.1\|1783537_1784767_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NZ_CP017060.1\|WP_000994724.1\|1798455_1799370_+\|membrane-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_016082055.1\|1789858_1790449_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017060.1\|WP_002093946.1\|1794060_1795362_+\|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180387
NZ_CP017060.1\|WP_000751827.1\|1779344_1780505_+\|non-hemolytic-enterotoxin-NHE-subunit-A	unknown	unknown	gnl\|CDD\|368615
NZ_CP017060.1\|WP_089170804.1\|1784913_1786284_+\|carboxylic-ester-hydrolase	unknown	unknown	gnl\|CDD\|335313
NZ_CP017060.1\|WP_000409781.1\|1790819_1791767_+\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_CP017060.1\|WP_089170394.1\|1795857_1797215_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP017060.1\|WP_089170808.1\|1792842_1794024_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP017060.1\|WP_089170802.1\|1781858_1782938_+\|alpha-helical-pore-forming-toxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP017060.1\|WP_000358533.1\|1795395_1795791_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142

Protein	Function_ID	Function_description	E-value
NZ_CP017060.1\|WP_000789783.1\|1797978_1798209_-\|DUF896-domain-containing-protein	gnl\|CDD\|167247	PRK01631, PRK01631, hypothetical protein; Provisional.	1.29475e-35
NZ_CP017060.1\|WP_001017441.1\|1792071_1792743_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	2.5186e-124
NZ_CP017060.1\|WP_089170806.1\|1788103_1788415_-\|heavy-metal-binding-domain-containing-protein	gnl\|CDD\|105987	PRK12856, PRK12856, hypothetical protein; Provisional.	1.97252e-51
NZ_CP017060.1\|WP_000254901.1\|1776920_1778747_+\|APC-family-permease	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	3.75501e-29
NZ_CP017060.1\|WP_000162968.1\|1780542_1781751_+\|non-hemolytic-enterotoxin-NHE-subunit-B	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	1.30182e-65
NZ_CP017060.1\|WP_000561074.1\|1797451_1797931_+\|cytochrome-c-biogenesis-protein-CcdC	gnl\|CDD\|377808	pfam07301, DUF1453, Protein of unknown function (DUF1453). This family consists of several hypothetical bacterial proteins of around 150 residues in length. The function of this family is unknown. Members of this family seem to be found exclusively in the Order Bacillales.	6.66482e-58
NZ_CP017060.1\|WP_089170805.1\|1786547_1787132_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.74459e-05
NZ_CP017060.1\|WP_065382478.1\|1787195_1787819_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	3.85822e-15
NZ_CP017060.1\|WP_089170801.1\|1775353_1776298_+\|2-dehydropantoate-2-reductase	gnl\|CDD\|183829	PRK12921, PRK12921, oxidoreductase.	8.6254e-161
NZ_CP017060.1\|WP_089170803.1\|1783537_1784767_+\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NZ_CP017060.1\|WP_016082055.1\|1789858_1790449_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.53033e-13
NZ_CP017060.1\|WP_002093946.1\|1794060_1795362_+\|pyrimidine-nucleoside-phosphorylase	gnl\|CDD\|180387	PRK06078, PRK06078, pyrimidine-nucleoside phosphorylase; Reviewed.	0
NZ_CP017060.1\|WP_000751827.1\|1779344_1780505_+\|non-hemolytic-enterotoxin-NHE-subunit-A	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	6.00276e-51
NZ_CP017060.1\|WP_089170804.1\|1784913_1786284_+\|carboxylic-ester-hydrolase	gnl\|CDD\|335313	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II. Platelet-activating factor acetylhydrolase (PAF-AH) is a subfamily of phospholipases A2, responsible for inactivation of platelet-activating factor through cleavage of an acetyl group. Three known PAF-AHs are the brain heterotrimeric PAF-AH Ib, whose catalytic beta and gamma subunits are aligned in pfam02266, the extracellular, plasma PAF-AH (pPAF-AH), and the intracellular PAF-AH isoform II (PAF-AH II). This family aligns pPAF-AH and PAF-AH II, whose similarity was previously noted.	7.58049e-22
NZ_CP017060.1\|WP_000409781.1\|1790819_1791767_+\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	2.24789e-116
NZ_CP017060.1\|WP_089170394.1\|1795857_1797215_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.93643e-54
NZ_CP017060.1\|WP_089170808.1\|1792842_1794024_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	9.6992e-154
NZ_CP017060.1\|WP_089170802.1\|1781858_1782938_+\|alpha-helical-pore-forming-toxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	4.23754e-61
NZ_CP017060.1\|WP_000358533.1\|1795395_1795791_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	5.02777e-76

>NZ_CP017060.1|WP_089170806.1|1788103_1788415_-|heavy-metal-binding-domain-containing-protein
MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGAYETKLKDARDIAMDEMKELAKQKGANAIVGIDVDYEVVRDGMLMVAVSGTAVRI
>NZ_CP017060.1|WP_065382478.1|1787195_1787819_+|GNAT-family-N-acetyltransferase
MNKISIVKAVHQSMVGAQLNVMALEYMAFPLAGSEEKNTVDWTFCKLWRQENNRFSHQYAYEAQMDGKTLGMITCYPISVLNRLAWPTFKQLLSFRKLGFVVYNILNIKMLYSMFTLKEGEDDEFHIGTIALLPESRGLGIGTRLIEFAEEQASLQGFAKCSLTVKKENQLAIKLYQRIGYQITGEINKPKLSLYRMVKNVEPYNHL
>NZ_CP017060.1|WP_089170805.1|1786547_1787132_+|TetR/AcrR-family-transcriptional-regulator
MKKDLSALKEARFNAILDSATILLVENPTASMNEIAEYAGIGIATLHRYVESREKLMLFLGHRAIQLVSDTVNQIPLDEERSENYIPELIEALIPLGDKIYFLGHDASVFNNKELGEAEEKLREPLRRVIELLQQRGYIQQTVSSEWILNTLYALLFHTWEQVHEGNVAKKSAAELVLNTFYYGFKAKDELRGK
>NZ_CP017060.1|WP_089170804.1|1784913_1786284_+|carboxylic-ester-hydrolase
MNFWEVVLIVVNFSLLSWILLIGRETKKWSKLATLIAVVMVTVQLLAEGFRWQMIPAYVSPVILILCYLLTGRKKGFRSSGIFIVKTSLLCIYLFVAVALPLLMPVFSFEEPTGPHKIGTKLYHWVDHQRNEPYSKNPNDRRELMVQIWYPAAEKSKGDPEPYIRNINELSKGLEKTLSIPAFAFSHMELVKSHSFMDLQLSDSENHYPILLFSHGFNGFRNQNTFQVEELASQGYIVLSIDHTFDAAATVFPGGRTAYVQPINLTDEGDSHIKLWEEDVSFVLNQIEKLNENDETGFFTGRLDTSRIGMFGHSYGGATAAQILAKDSRVKAAINMDGTLYGEILPESGIGKPFLLMNAEEPDEADPFEVRERYGRGLAGGGMSMVIPHTDHTSFTDLHLFSPLLQSSGENPKEVHRIINEFSLAFFDQYVKQKDDGSTLKRLITKYPEVNFKINR
>NZ_CP017060.1|WP_089170803.1|1783537_1784767_+|aminopeptidase
MIFEEKLKAYAELTVKIGVNIQPGQYLLVNTSVDALDFARIIVKEAYKAGAGRVHVNFSDEEMERAYFDYASDEEFNRFPEWIVKMNDELIERKGALLMIDATDPDKFTGISSDRLATYQKVAGAALRNNRNAVMKDSIAWSMVAVPSPKWASKVFPGLATEDQVPALWEAIFKAVRIGDGSAIEKWREHVTNLESRAVLLNNKKYMKLHYTAPGTDLTIALAPQHKWVTGGGKTPDDTIFMANMPTEEVYTLPMKQGVNGYVSNTKPLVYQGNIIDGFTLTFEEGKIVKAEAQVGHDLLQELINVDEGSCYLGEVALVPHESPISASGILYFNTLFDENASNHLAIGKAYPTCLEDGRDLENDQLETLGANISITHEDFMIGSSEMDIDGILPDGTVEPIFRKGSWAF
>NZ_CP017060.1|WP_089170802.1|1781858_1782938_+|alpha-helical-pore-forming-toxin-family-protein
MQKSFYKKCLLAVMIAGVATSNAFPLHPFAAEQNVKVLQENVKNYSLGPAGFQDVMAQTTSSIFAMDSYAKLIQNQQETDLSKISSINSEFKGNMIQHQRDAKVNAAYWLNNMKPQIMKTDQNIINYNNTFQSYYNDMLIAIDQKDSGKLKADLEKLYADIVKNQNEVDGLLGNLKAFRDRMAKDTNSFKEDTNQLTAILASTNAGIPALEQQINTYNDSIKKSNDMVIAGGVLCVALITCLAGGPMIAVAKKDIANAEREIANLKDRISGAQAEVLILTDVKNKTTNMTETIDAAITALQNISNQWYTVGAKYNNLLQNVKGITPEEFTFIKEDLHTAKDSWKDVKDYTEKLHEGVAK
>NZ_CP017060.1|WP_000162968.1|1780542_1781751_+|non-hemolytic-enterotoxin-NHE-subunit-B
MTKKPYKVMALSALMAVFAAGNIMPAHTYAAESTVKQAPVHAVAKAYNDYEEYSLGPEGLKDAMERTGSNALVMDLYALTIIKQGNVNFGNVSSVDAALKGKVIQHQDTARGNAKQWLDVLKPQLISTNQNIINYNTKFQNYYDTLVAAVDAKDKATLTKGLTRLSSSINENKAQVDQLVEDLKKFRNKMTSDTQNFKGDANQITSILASQDAGIPLLQNQITTYNEAISKYNAIIIGSSVATALGPIAIIGGAVVIATGAGTPLGVALIAGGAAAVGGGTAGIVLAKKELDNAQAEIQKITGQVTTAQLEVAGLTNIKTQTEYLTNTIDTAITALQNISNQWYTMGSKYNSLLQNVDSISPNDLVFIKEDLNIAKDSWKNIKDYAEKIYAEDIKVVDTKKA
>NZ_CP017060.1|WP_000751827.1|1779344_1780505_+|non-hemolytic-enterotoxin-NHE-subunit-A
MKKTLITGLLVTAVSTSCFIPVSAYAKEGQTEVKTVYAQNVIAPNTLSNSIRMLGSQSPLIQAYGLIILQQPDIKVNAMSSLTNHQKFAKANVREWIDEYNPKLIDLNQEMMRYSTRFNSYYSKLYELAGNVNEDQQAKADFMSAYGKLQLQVQSIQESMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQGSSGDIVKLREDIKRIQGEIQAELTTILNRPQEIIKGSINIGKQVFTITNQTAQTKTIDFVSIGTLSNEIVNAADSQTREAALRIQQKQKELLPLIQKLSQTEAEATQITFVEDQVNSFTELIDRQITTLETLLTDWKVLNNNMIQIQKNVEEGTYTDSSLLQKHFNQIKKVSDEMNKQTNQFEDYVTNVEVH
>NZ_CP017060.1|WP_000254901.1|1776920_1778747_+|APC-family-permease
MVSSIKRFLIGRPLKSTELGEQKLNKTKALAILSSDALSSVAYGPEQILIALAGVGAIAYWYSIPIAVGVLVLLTALILSYRQIIFAYPHGGGAYVVSKENLGMNPGLIAGGSLLVDYILTVAVSVSAGTDALTSAFPSLHAHNVIIAIIFVIFITILNLRGVTESASVLAYPVYLFVLALFILIGVGIYNILTGHVSPTLHTPIGTPVAGISLFLLLRAFASGSSALTGVEAISNAIPNFKDPAPNNAAKTLLAMGALLAVLFSGIVFLAYYYGVTPSKEVTVVSQIAEQTFGRNFMYYFIQGTTALILILAANTGYSAFPLLAVNLAKDKFIPRMFTIRGDRLGYSNGIIILGVASIILIVAFQGQTEHLIPLYAVGVFIPFTLSQTGMVLKWLREKPEGWVLKLTVNLIGAVISFIVMSMFFLTKFAQVWSILIFLPAIIFLFHRIKKHYDAVGDQLSLKTCEPLIPIEGNVIVVPVAGMTHVVENSLNYAKSLSADQVIAVYVAFDREEEKKFEEKWKVWQPEVRLVTLHSHYRSIIQPLTKFIDTVQYKASESNYRVTVVIPQFIPKKGWHNILHNQSSLLIRAYLLYKRNVVITTVPYHLKK
>NZ_CP017060.1|WP_089170801.1|1775353_1776298_+|2-dehydropantoate-2-reductase
MRILVLGAGGVGGFFGGRLVEKGEDVTFLVRSKRKKQLEERGLVIRSVNGDFSFQPKLITKEERTSQFDVILFSTKAYHLNEAIQDLKPFVGDNTVIIPLLNGIAHLSLLQKEFGEEKVIGGLCFMETTLNDQGEIVQTSAANRLVFGEIKSQNSERVKHISKAFSGTKSSFVLSENITQDMWHKYLFITVMSGVTTLMRAPIGPIRESEGGRDFIRNVFEESVQIMRVLGAPVKANIAQEHMKTIDKISYDMKSSMQRDMEKGSFIEGKHLQGYLLDVAEKFSIAAPLLESIYQNLKVYEEMTFNKSVIELDV
>NZ_CP017060.1|WP_016082055.1|1789858_1790449_+|TetR/AcrR-family-transcriptional-regulator
MTKVDKVKEKIIETSLYLFNTNGITRTSIQDIMTATELPKGSIYRRFKSKEEIVLAAYDKSGEIMWSHFHKAMENKKTAIDKILAIFLVYQDAANNPPIAGGCPLLNSAIESTGVFPELQKAAAKGYDDTVMLMASLIKEGIEKQELKEDIDIISLASFLASSMEGAIMASRVSNDNIHHHYFIEQIKHHLFSYSK
>NZ_CP017060.1|WP_000409781.1|1790819_1791767_+|sugar-binding-transcriptional-regulator
MEKDKQQLSVEVARLYYQSDYSQQEIANKLNISRPTISRLLKYAKEKGFVQISIADPFADLDNVGNLLKEKYNLLEAHVVFSPVPEYATITEYISKYAAEYMEKTVKNGDIVGVSWGMTMYEIARKIVPQHVKGVEVVQLKGGISHSSVNTYANETIALFADAFQTTPRNLPLPVIFDNAVTKELVEQDRHIHHIIEMGKQANIAIFTVGTVRDEALLFRLGYFDKDETNLLKKQSVGDICSRFFDGDGNISSEEINKRTIGIELEELKLKKRSILVAGGNRKIKAIDGALRGGYANVLIIDQHTAKELLHYQKG
>NZ_CP017060.1|WP_001017441.1|1792071_1792743_+|deoxyribose-phosphate-aldolase
MNIAKLIDHTILKANTTKEDVMKVIEEAKEYKFASVCINPTWVKLAADELAGHDVDVCTVIGFPLGASTTETKAFETKDAIAKGATEVDMVINVGALKDGDNELVEKDIYEVVQAAKGKALVKVIIETCLLTDEEKVRACELSVKAGADFVKTSTGFSTGGATAEDIALMRKTVGPNVGVKASGGVRTREDADKMVAAGASRVGASASVAIVLNDAKGATDNY
>NZ_CP017060.1|WP_089170808.1|1792842_1794024_+|NupC/NupG-family-nucleoside-CNT-transporter
MKYLIGVFGLVLILGIAWLASNDRKKVKYRPIITMVILQFILGFLLLNTSVGNILISGIADGFGELLKYAADGVNFVFGGLVNQKEFSFFLSVLMPIVFISALIGILQHIKVLPIIVKSIGLALSKVNGMGKLESYNAVASAILGQSEVFISVKKQLGLLSEKRMYTLCASAMSTVSMSIVGSYMVLLKPQYVVTALVLNLFGGFIIASIINPYEVTEEEDMLEVQEEEKKTFFEVLGEYIIDGFKVAITVAAMLVGFVALIAFINAVFKGVIGISFQEILGYAFAPFAFIMGVPWHEAVNAGNIMATKLVSNEFVAMTDLAQGNFNFSDRTTAIISVFLVSFANFSSIGIIAGAVKSLNEKQGNVVARFGLKLLFGATLVSFLSATIVGLLF
>NZ_CP017060.1|WP_002093946.1|1794060_1795362_+|pyrimidine-nucleoside-phosphorylase
MRMVDIIAKKRDGKELTTEEIKFFINGYTDGSIPDYQVSALAMAIFFKDMTDRERADLTMAMVESGETIDLSAIEGIKVDKHSTGGVGDTTTLVLGPLVAALDVPVAKMSGRGLGHTGGTIDKLEAVEGFHVEITKEQFIDIVNRDKVAVIGQTGNLTPADKKIYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTEEDAKELAHAMVRIGNNVGRQTMAVISDMSQPLGFAIGNALEVKEAIDTLKGEGPEDLTELVLVLGSQMVVLAKKANTLEEAREMLIEVMKNGKATAKFKEFLSNQGGDSSIVDNPEKMPQAKYVIDVPAKTSGVISNIVADEIGIAAMLLGAGRATKEDEIDLAVGLMLRKKVGDAVKEGEPFVTIYANRENVEDVKAKIYENISIAETAVAPKLVHTVITD
>NZ_CP017060.1|WP_000358533.1|1795395_1795791_+|cytidine-deaminase
MDKKKYIEEANKMLSKAYIPYSKFPVGAALVTKEGKIYTGCNIENASYGLCNCAERTAIFKAVSEGERDFSYLVITGETDGPISPCGACRQVIAEFCDPKMPVLLTNVKGDEKEVTVEQLLPGAFTIDDLK
>NZ_CP017060.1|WP_089170394.1|1795857_1797215_-|IS3-family-transposase
MTKFTKDLKLTLVQGFNPKIISQAEYAKQMHITKAQFQYWLRLYELHGEEGLHEVYTNYTAEFKLDVLNFMAQSGISLMDTAAIFMIPSFTTVYQWKKQFEVGGLDALEPKKKGRPSMKNKNTKHDTKKIPAEGSVEALQAELERLRMENAYFKKVECLSSKQGKITKQDKAQVVYELRHEFQVKELVKLADIPRSTYYFYVKQMDRIDPDADLKVEIKAIYDEHEGRYGYRRIRDELANRNQIVNHKKVQRIMKELGLKCLVRMKKYKSYKGTVGKIAPHILERKFTADTPNEKWVTDITEFKLFGEKLYLSPVLDLYNGEIITYTIGSRPTYSLVSEMLETALEGLPENHQLMMHSDQGWHYQMKQYRHALQKRGIVQSMSRKGNCYDNAVMENFFGIMKSEFLYIKEFESVEHFKIELEIYIDYYNTKRIKAKLKMSPVQYRTHFYQAA
>NZ_CP017060.1|WP_000561074.1|1797451_1797931_+|cytochrome-c-biogenesis-protein-CcdC
MIALLSSVVAVCMAVGVMFLRFKAAKKPVTKKKIILPPIFMSTGAMMYFLPEFRLTSLEIVEAISIGLIFSIFLIKTTKFEIKGEHIFMKPSKAFIFILVGLLAVRVALKSYLSQSIDLAELSGMFFLLAFAMIVSWRIAMYRSFTKLEKTINRAGISI
>NZ_CP017060.1|WP_000789783.1|1797978_1798209_-|DUF896-domain-containing-protein
MKNILFRINELSKKEKATGLTVDEKQEQQMLRQNYTQTFRGSLDSILLNTKIVDQNGLNVTPAALQDAQIRLKLSK
>NZ_CP017060.1|WP_000994724.1|1798455_1799370_+|membrane-protein
MNAVISKKETIISYTIAILFILAMVTAGVLLNDPEVILPEIAAMAIALWAYREPGWLRQPEKIFIAPSITAVIGFMVNQMDIAYLGKVSLTLVFMMLFLRVIQSNLAPSIATGLLPLVTNATEWSFVIAVFALTFILMVGVLIFKLNNGIKRKVQIQYKYMTVFLILNFVWISLCWITGYEQLAVIPPILVVVYESLQKPMYNEKMAFKQIVVLTTSATVGTILYFAIDSWIVVTLLNMILMLILLKIVGVRIPAVYAFPLLPLVFPDGMIKMLPVASFVAGVFLFGAVLLYKKWEMKQKGMAM

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Crispr_ID: NZ_CP017060_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017060_3

2295375-2295468

Unclear

Consensus_repeat	Method
TGAATTAATGCAACAAATTGCTCAG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP017060_3

>merge|NZ_CP017060|3|2295375-2295468|CRISPRCasFinder
TGAATTAATGCAACAAATTGCTCAGCGTAATCAGAATGCATTAAAACAGAGTACATATAAAACTAATTTTGAATTAATGCAACAAATTGCTCAG

>NZ_CP017060|3|3|2295375-2295468|CRISPRCasFinder
TGAATTAATGCAACAAATTGCTCAG	CGTAATCAGAATGCATTAAAACAGAGTACATATAAAACTAATTT
TGAATTAATGCAACAAATTGCTCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017060.1\|WP_089170994.1\|2293330_2294185_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP017060.1\|WP_089170992.1\|2291777_2292260_+\|ArpU-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|273725
NZ_CP017060.1\|WP_089170998.1\|2298488_2299271_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP017060.1\|WP_089170989.1\|2289819_2290284_-\|exosporium-protein-D	unknown	unknown	unknown
NZ_CP017060.1\|WP_000072495.1\|2297811_2298219_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319899
NZ_CP017060.1\|WP_089171000.1\|2302846_2303584_+\|type-II-toxin-antitoxin-system-SpoIISA-family-toxin	unknown	unknown	gnl\|CDD\|372944
NZ_CP017060.1\|WP_002182751.1\|2285756_2287121_+\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|223587
NZ_CP017060.1\|WP_000033159.1\|2288421_2288634_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_088024060.1\|2303897_2304074_+\|stage-II-sporulation-protein-SB	unknown	unknown	unknown
NZ_CP017060.1\|WP_000858032.1\|2294358_2294559_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_089170990.1\|2290957_2291152_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_089170991.1\|2291579_2291750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_089170993.1\|2292259_2292778_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271192
NZ_CP017060.1\|WP_065486066.1\|2296001_2296214_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_089170997.1\|2296982_2297693_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP017060.1\|WP_157676081.1\|2299428_2301105_-\|alpha-keto-acid-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|226470
NZ_CP017060.1\|WP_053564493.1\|2301221_2301704_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP017060.1\|WP_000237818.1\|2303696_2303825_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_016512840.1\|2301870_2302608_+\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184516
NZ_CP017060.1\|WP_089170988.1\|2288928_2289315_-\|spore-coat-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017060.1\|WP_089170994.1\|2293330_2294185_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.80964e-34
NZ_CP017060.1\|WP_089170992.1\|2291777_2292260_+\|ArpU-family-transcriptional-regulator	gnl\|CDD\|273725	TIGR01637, Putative_autolysin_regulatory_protein_ArpU, phage transcriptional regulator, ArpU family. This model represents a family of phage proteins, including ArpU, called a putative autolysin regulatory protein. ArpU was described as a regulator of cellular muramidase-2 of Enterococcus hirae but appears to have been cloned from a prophage. This family appears related to the RinA family of bacteriophage transcriptional activators and to some sporulation-specific sigma factors. We propose that this is a phage transcriptional activator family. [Mobile and extrachromosomal element functions, Prophage functions, Regulatory functions, DNA interactions].	1.43531e-15
NZ_CP017060.1\|WP_089170998.1\|2298488_2299271_+\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.70854e-20
NZ_CP017060.1\|WP_089170993.1\|2292259_2292778_+\|site-specific-integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	6.78579e-61
NZ_CP017060.1\|WP_000072495.1\|2297811_2298219_+\|VOC-family-protein	gnl\|CDD\|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	6.96414e-57
NZ_CP017060.1\|WP_089171000.1\|2302846_2303584_+\|type-II-toxin-antitoxin-system-SpoIISA-family-toxin	gnl\|CDD\|372944	pfam14171, SpoIISA_toxin, Toxin SpoIISA, type II toxin-antitoxin system. SpoIISA is a toxin which causes lysis of vegetatively growing cells. It forms part of a type II toxin-antitoxin system, where the SpoIISB protein, pfam14185, acts as an antitoxin. It is a transmembrane protein, with a cytoplasmic domain accounting for approximately two-thirds of the protein. The structure of the cytoplasmic domain resembles that of the GAF domains, pfam01590. SpoIISB binds to the cytoplasmic domain of SpoIISA with high affinity.	8.27258e-82
NZ_CP017060.1\|WP_002182751.1\|2285756_2287121_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.05047e-148
NZ_CP017060.1\|WP_089170997.1\|2296982_2297693_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.64335e-25
NZ_CP017060.1\|WP_053564493.1\|2301221_2301704_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	9.45046e-17
NZ_CP017060.1\|WP_016512840.1\|2301870_2302608_+\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	1.36849e-174
NZ_CP017060.1\|WP_157676081.1\|2299428_2301105_-\|alpha-keto-acid-decarboxylase-family-protein	gnl\|CDD\|226470	COG3961, COG3961, Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only].	0

>NZ_CP017060.1|WP_000858032.1|2294358_2294559_-|hypothetical-protein
MKTSEETHWQRFKRKSKSPKEWLKKVYEFFINEHVWDAIFKVFLKLVWAVKGMGKSLKRVIENIFN
>NZ_CP017060.1|WP_089170994.1|2293330_2294185_+|alpha/beta-hydrolase
MTEKIIKINEIDICTESFGDSADPAVLLIMGAMCSMVYWDEEFCQQLADTGRYVIRYDNRDVGRSTTYKPGSSHYTVVDMADDAIGVLDAYHIDEAHIVGMSLGGMIAQIVALRNPQRVLSITLIASGIFGSEDNNRNLPPIDEKILAYHANAAKLNWSDEESVASYLVAGSALLCGSNHKFDEKRVYKQVEKEIKRANNLLSMFNHSLLKGDDSYEGKLKGINIPTLVIHGTEDIVLPYEHGLALVDEIPHALLLTLEGSGHEIHCDDWNHIINAISNHTSVL
>NZ_CP017060.1|WP_089170993.1|2292259_2292778_+|site-specific-integrase
MNFVQPIRDPEEIQQLKDYFKEKSLRNYILFIMGINTGLRISDILKLKVGDVKGSHISMREKKTGKQKRIQITAALKRELKWFIEEREDNEYLLQSRQGKNRPIGRSMAYKILSGAASEFGLDEIGTYTLRKTYGYHMYMQTKNIALLMEIFNHSSEKVKLRYIGVNQDAMG
>NZ_CP017060.1|WP_089170992.1|2291777_2292260_+|ArpU-family-transcriptional-regulator
MTKQLSFLPKIDRTATQEELEGVLESVRIHRQFGMMRKEMKVTPSYEIREHGSTHTVGKPLEDVAIANIQQSKREEWLERMSVRIDQFLNQLGNGRAGSIQRDIIYKRYLEEEDVCDYMVYNEIGMSERTYRRWKSKAFYKLAFALGLEVYETEETGGKE
>NZ_CP017060.1|WP_089170991.1|2291579_2291750_+|hypothetical-protein
MRVLKDQLHELKNQSKQGKKKNKKKPKEKLSTREIEDLMGMHRPCYERRRGAIRQK
>NZ_CP017060.1|WP_089170990.1|2290957_2291152_+|hypothetical-protein
MNLKEYVVYKGESLLCIGTIQECADYMSVLPSTVRFYTRPAYQRRIASRKNARNYITVTELEED
>NZ_CP017060.1|WP_089170989.1|2289819_2290284_-|exosporium-protein-D
MADYFYKDGKKYYKNQAHSGPQKNNCFVETHTIGGSGVNLNGNIPISIDLLDTTPQTVFEDFTNNHNKTLIQLFVVGMSAPVQVTILTRRSSVPITTTLQPVQTKIFQVEDFQSLTFTKQEGPASVVSLFIQKTFCICCNDNNDSCNEYYHECN
>NZ_CP017060.1|WP_089170988.1|2288928_2289315_-|spore-coat-protein
MASFEIGARSLFNFRNERFFLLVEDEITIPDKGVEIDPVNIYEIDQQTFNFIRDEGDTPVIEPVDTLPTVPPGFKLERKCIFTVDNSHFVIYDLEDDTDNNVLLRISAALFNSLRNSGVRECFPQNFI
>NZ_CP017060.1|WP_000033159.1|2288421_2288634_-|hypothetical-protein
MSKFRKKMIKYLQTFWGCLAFGVLMFAIFLITDLTDASLNTLGWRDWLGSVAGATILSVGMFTLNKLNLK
>NZ_CP017060.1|WP_002182751.1|2285756_2287121_+|DEAD/DEAH-box-helicase
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPECSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLGAPIQREIIEQPKIKRVDENGKPVPKPAPKKSGQNRQRDSREGSRSESRRDSRNSSRSDSRNSSRNENNRSFNKPSNKKGSTKQGQQRRGR
>NZ_CP017060.1|WP_065486066.1|2296001_2296214_+|hypothetical-protein
MQAKKILKIIKPTKANVLAIPFGAKIAKTIEIGIKIKKGPAKYRLKNKNPVKNIEMKPKYSLIVLSLLKK
>NZ_CP017060.1|WP_089170997.1|2296982_2297693_+|class-I-SAM-dependent-methyltransferase
MKTEMLHTQEDILKMLDSLLRPAEPFWNEFYENREKDVPFFENVPDENLVSYIQKERVSKGMVLELGCGPGRNAIYLATQGFDVTAVDLSVEGINWAKERALAKEVEIHFICDSIFNLEVQNEFDFVYDSGCLHHIPPHRRINYVDLIKNSLKSGGYFGLTCFAAGDLDERNGSEITDWDVYREWSLQGGLAYSEEKLREIFKEFEVIEIRRMKQIKQPKEMFGESFLWTALFKKK
>NZ_CP017060.1|WP_000072495.1|2297811_2298219_+|VOC-family-protein
MSNTNQKITTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNFTFTPAMSLYVTCETEEEIETVFHKLAQDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLAE
>NZ_CP017060.1|WP_089170998.1|2298488_2299271_+|SAM-dependent-methyltransferase
MDITQQNSNAWDKKVEEGSRYTQPVSSEVIEKSKSGEWEITVTTEKSVPREWFPKSLDGLKILCLASGGGQQAPVLAAAGADVTVTDISKKQLEQDEKVAKRDGLTLKTVQGDMSNLSDFEDEYFDIVVNPVSNLFVKDVHLVWNEVSRVLKNKGILIAGFTNPLLWIFDDNQEQKGILDVKHSIPSSTLDYLPEDEVQDYIDSNQTIEYAHTLEDQIQGQIEAGFVITGFYEDDFGGTRILDKHIKTFIATKAIKLKMD
>NZ_CP017060.1|WP_157676081.1|2299428_2301105_-|alpha-keto-acid-decarboxylase-family-protein
MKKQYTVSTYLLDRLHELGIEHIFGVPGDYNLAFLDDVVAHENLKWIGNCNELNAAYAADGYARIKGVAALITTFGVGELSAINGIAGSYAENVPVIKITGTPPTKVMENGAIVHHTLGDGKFDHFSNMYREITVAQTNVKPEHAAEEIDRVLRACWNEKRPVHINLPIDVYNKPINKPTEPILYKPILSNKEALDKMLLHATSIINNAKKPVILADFEVDRFHAKENLHQFVEKTGFPIATLSMGKGIFPEKHPQFIGIYTGDVSSPYLRKRIDESDCIISIGVKLTDTITGGFTQGFTKEQVIEIHPYTVKIIDKKYGPVVMQDVLQHLSDSIAHRNKDTLEIKPFISAPSPFTEEFNPKAQMVTQKRFWQQMYHFLQENDILIVEQGTPFFGSAAIPLPKNTAYVGQPLWGSIGYTLPALLGTQLVNLARRNILIIGDGSFQVTAQELSTILRQNLKPIIFLINNNGYTVERAIHGQNQPYNDIQMWDYNKLSMVFGSEEKSLTFKVENEAELAEVLTNITFYKNQLIFIEVIMSQSDQPELLAKLGKRFGQQNS
>NZ_CP017060.1|WP_053564493.1|2301221_2301704_+|winged-helix-turn-helix-transcriptional-regulator
MTQHKEEQMNEALALFYFAYKTFTEKPDEIIKEYGIQRVHHRILFFIARFPGISVNELLSLLEISKQALHGPLRQLVEKGLIESNEAMHDRRVKQLSLTEKGTDLEKKLSDVQRQQMGAIFSKFGESYEDNWHQVMNEMANSRSGFDAWITKRELPVDQK
>NZ_CP017060.1|WP_016512840.1|2301870_2302608_+|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MIKLVLIRHGQSLWNLENRFTGWTDVDLSENGLSEAREAGAILKKNGYTFDVAYTSVLKRAIRTLWIVLHEMDLTWVPIHKSWKLNERHYGALQGLNKDETAQKYGEEQVHIWRRSVDVRPPALTEDDSRYEANDPRYKTLKKGEFPLTECLEDTEKRVLAYWHSEIAPTLKSGNKVIISSHGNTIRSLVKYLDNLSSDGVVSLNIPTSIPLVYELDENLRPIRHYYLSMDGEVPEGEIPKHISF
>NZ_CP017060.1|WP_089171000.1|2302846_2303584_+|type-II-toxin-antitoxin-system-SpoIISA-family-toxin
MISNIRIGLFVLAIVFVVLVFFYWKNEELYEEKKQRIRKTWYGLFIISVTVYFMIKGIDLTLWKNLLMFTAMVIFVDIAFILTPNISEIWGAKFSDIGKTVQSIKRSLIASKARGEIYTTIIQNVNPSVFGTMEWHTEEEYTKSLNAFLDSYGEKIGAKIVVFEAAKELNTNFRGIRSQFSIIVPLEHMEQLNEQKAVQVENVGIIPAKIVSDVFIVIDGKKNNLQDRDFENVYNLTIHHSYFSK
>NZ_CP017060.1|WP_000237818.1|2303696_2303825_+|hypothetical-protein
MVKDYDNDFFKEDNEDTTDFSLIKGDTLQQVEELEEELKRKS
>NZ_CP017060.1|WP_088024060.1|2303897_2304074_+|stage-II-sporulation-protein-SB
MAEVNVQKSSFFKEKKEESNTDFSLVKGALTENINRLEKLMNNSSSKYIQVKRKKENA

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Crispr_ID: NZ_CP017060_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017060_4

3654118-3654396

Orphan

Consensus_repeat	Method
AGGNGTTCAAGGTAACACNGGTGCTACTGGTGCTACNNNNNNNNN	CRT

4 spacers

The CRISPR arrays of NZ_CP017060_4

>merge|NZ_CP017060|4|3654118-3654396|CRT
AGGCGTTCAAGGTAACACAGGTGCTACTGGTGCTACTGGTGCTACTGGTGCTACTGGTGCTACTGGACCTCAAGGTGTTCAAGGTAACACAGGTGCTACTGGTGCTACCGGCGCTACTGGACCTCAGGGTGTTCAAGGCAACACTGGTGCTACTGGTGCTACTGGTGCTACTGGACCTCAGGGTGTTCAAGGTAACACAGGTGCTACTGGCGCTACTGGTGCTACCGGCACTACTGGACCTCAAGGCGTTCAAGGTAACACTGGTGCTACTGGTGCCAC

>NZ_CP017060|4|1|3654118-3654396|CRT
AGGCGTTCAAGGTAACACAGGTGCTACTGGTGCTAC	TGGTGCTACTGGTGCTACTGGTGCTACTGGACCTCA
AGGTGTTCAAGGTAACACAGGTGCTACTGGTGCTAC	CGGCGCTACTGGACCTCA
GGGTGTTCAAGGCAACACTGGTGCTACTGGTGCTAC	TGGTGCTACTGGACCTCAGGGTGTTCA
AGGTAACACAGGTGCTACTGGCGCTACTGGTGCTAC	CGGCACTACTGGACCTCA
AGGCGTTCAAGGTAACACTGGTGCTACTGGTGCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017060.1\|WP_000504953.1\|3657484_3658438_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
NZ_CP017060.1\|WP_000181505.1\|3649936_3650074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_000228315.1\|3665197_3665740_-\|DUF420-domain-containing-protein	unknown	unknown	gnl\|CDD\|225204
NZ_CP017060.1\|WP_000438177.1\|3650105_3651062_-\|stage-V-sporulation-protein-K	unknown	unknown	gnl\|CDD\|163057
NZ_CP017060.1\|WP_000092763.1\|3644635_3645970_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NZ_CP017060.1\|WP_000708856.1\|3643637_3644297_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP017060.1\|WP_000450330.1\|3651326_3652292_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP017060.1\|WP_000814431.1\|3658618_3658864_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_000704609.1\|3660226_3662083_-\|PTS-fructose-transporter-subunit-IIABC	unknown	unknown	gnl\|CDD\|236740
NZ_CP017060.1\|WP_089171632.1\|3655810_3657165_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP017060.1\|WP_000656783.1\|3646018_3646408_-\|transcriptional-repressor-GlnR	unknown	unknown	gnl\|CDD\|133380
NZ_CP017060.1\|WP_089171634.1\|3662096_3663008_-\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|238570
NZ_CP017060.1\|WP_089171635.1\|3663916_3665080_-\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341466
NZ_CP017060.1\|WP_000813896.1\|3657238_3657463_-\|RNA-chaperone-Hfq	unknown	unknown	gnl\|CDD\|179001
NZ_CP017060.1\|WP_069356096.1\|3646582_3647854_-\|methionine-gamma-lyase-family-protein	unknown	unknown	gnl\|CDD\|311036
NZ_CP017060.1\|WP_089171628.1\|3643222_3643435_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017060.1\|WP_142340513.1\|3647846_3649121_-\|GTPase-HflX	unknown	unknown	gnl\|CDD\|274455
NZ_CP017060.1\|WP_000957288.1\|3663004_3663757_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP017060.1\|WP_089171633.1\|3658926_3659877_-\|3D-domain-containing-protein	unknown	unknown	gnl\|CDD\|226112
NZ_CP017060.1\|WP_089171630.1\|3649213_3649837_+\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415

Protein	Function_ID	Function_description	E-value
NZ_CP017060.1\|WP_000957288.1\|3663004_3663757_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.43302e-81
NZ_CP017060.1\|WP_000228315.1\|3665197_3665740_-\|DUF420-domain-containing-protein	gnl\|CDD\|225204	COG2322, COG2322, Predicted membrane protein [Function unknown].	9.14687e-57
NZ_CP017060.1\|WP_000438177.1\|3650105_3651062_-\|stage-V-sporulation-protein-K	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	1.36822e-156
NZ_CP017060.1\|WP_000092763.1\|3644635_3645970_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NZ_CP017060.1\|WP_000708856.1\|3643637_3644297_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	9.63774e-29
NZ_CP017060.1\|WP_000450330.1\|3651326_3652292_+\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.54948e-12
NZ_CP017060.1\|WP_000704609.1\|3660226_3662083_-\|PTS-fructose-transporter-subunit-IIABC	gnl\|CDD\|236740	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional.	3.06716e-143
NZ_CP017060.1\|WP_089171632.1\|3655810_3657165_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.20521e-57
NZ_CP017060.1\|WP_000656783.1\|3646018_3646408_-\|transcriptional-repressor-GlnR	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	1.14369e-23
NZ_CP017060.1\|WP_089171634.1\|3662096_3663008_-\|1-phosphofructokinase	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	2.26518e-142
NZ_CP017060.1\|WP_089171635.1\|3663916_3665080_-\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	0
NZ_CP017060.1\|WP_000813896.1\|3657238_3657463_-\|RNA-chaperone-Hfq	gnl\|CDD\|179001	PRK00395, hfq, RNA-binding protein Hfq; Provisional.	3.4363e-41
NZ_CP017060.1\|WP_069356096.1\|3646582_3647854_-\|methionine-gamma-lyase-family-protein	gnl\|CDD\|311036	pfam06838, Met_gamma_lyase, Methionine gamma-lyase. This is a putative pyridoxal 5'-phosphate-dependent methionine gamma-lyase enzyme involved in methionine catabolism.	0
NZ_CP017060.1\|WP_142340513.1\|3647846_3649121_-\|GTPase-HflX	gnl\|CDD\|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	0
NZ_CP017060.1\|WP_000504953.1\|3657484_3658438_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	1.35751e-163
NZ_CP017060.1\|WP_089171633.1\|3658926_3659877_-\|3D-domain-containing-protein	gnl\|CDD\|226112	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown].	1.78734e-36
NZ_CP017060.1\|WP_089171630.1\|3649213_3649837_+\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	1.47171e-60

>NZ_CP017060.1|WP_000450330.1|3651326_3652292_+|site-specific-integrase
METTEFHDTIQAFSIFLLNKGRKPSTIKRYVYDVEDFGHWLEKNKKLPSSNIWATLCTKDYEDYFSDLKTNRHYSEKTMHRVFTVLNRMHHFLNIPNPLKNMEISIQPDRTLRNEDFISPDEEKRLKYIVTSLEGLSEKQLPVRPLLMDRNIAILNLLIDYGLSLQELTALTMHHVHFETNTLSIPATAGVERTITLAKEDKKQLYNYYKSIPEPVRPKYHSDDSLFVAFDFNRGTYRWVYENDAPKALTEIAIQKMIRLEVARANLRKGISGQHFRNTYILNLIKKETPESEIIKLAGFKSKISLKRYYQYAENRKNALL
>NZ_CP017060.1|WP_000438177.1|3650105_3651062_-|stage-V-sporulation-protein-K
MEQSMRKKNNNQINIVLNHRKKISLPAAENKTVISNETTIKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLKSEKQVLHMLFKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTRDLIKKAMGGILFIDEAYSLARGGEKDFGKEAIDTLVKHMEDKQHGFVLILAGYSREMNHFLSLNPGLQSRFPFIIEFADYSVNQLLEIGKRMYEDREYQLSKEAEWKFRDHLHAVKYSSQITSFSNGRYVRNIVEKSIRTQAMRLLQEDTYDKNDLIGISSMDLMLEEETHST
>NZ_CP017060.1|WP_000181505.1|3649936_3650074_+|hypothetical-protein
MTNHVNKGAQKSSVNQFGHDPNSAHEKSAKMERFHKAHQEKAKKE
>NZ_CP017060.1|WP_089171630.1|3649213_3649837_+|trimeric-intracellular-cation-channel-family-protein
MAWEIFSIIGTIAFALSGAIVAMEEDYDIFGVYILGMATAFGGGALRNLLIGYPIVAFWQQDMLFQIALLSMTIIFLFPNKLIRHWKKWENITDAIGLSAFAVQGALYAQKLNLPISATIVAAVLTGIGGGIIRDLLARRKPLVLRAEVYAFWTILAGFLIGAQIIVSDWALYILFILIVCFRMVSIHYKWHLPHRRIETKEHSMHK
>NZ_CP017060.1|WP_142340513.1|3647846_3649121_-|GTPase-HflX
MEEKEKVILVGCQLPQDDDEKFMHSMKELASLAKTARAEVLVSTTQKRPKFHPATYIGKGKLEELTMLTEELEPDVIIFNNELTPSQIRNLSSVLDARVIDRTQLILDIFAQRAKSREGKLQVELAQLQYTMPRLMGQGLSLSRLGGGIGTRGPGETKLETDRRHIRSRIDEIKKQLAVVVEHRKRYRERRKDNKVFQVSLIGYTNAGKSTLFNRLTEANTFEENLLFATLDPTTRKMPLPSGYTVLLTDTVGFIQDLPTSLIAAFRSTLEEAGEADVILHVVDSADPNYIGHEKTVKRLLSELEINHIPIITLYNKKDELHQNFIPFPKSDFLMTSAFEESDLLRIKEAIEMKMKKEMDRYRVEIPPSEGKLLTLLKTETLLAKMEFLEDKFVYDCAGYIFTHSSLNVQLKRFLVEEGENKNV
>NZ_CP017060.1|WP_069356096.1|3646582_3647854_-|methionine-gamma-lyase-family-protein
MFDRLKNGEKIAPIVKEVESQITEVHKRADEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDDKDRMVAFCQAIQYASPINSHFTPYANYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDELIEKNLLTIS
>NZ_CP017060.1|WP_000656783.1|3646018_3646408_-|transcriptional-repressor-GlnR
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLVSPTRTKGNRRLFSFNDVDKLLEIKDLLDQGLNMAGIKQVLLMKENQTEAVKVKEETKEISKTELRKILRDELQHTGRFNRTSLRQGDISRFFH
>NZ_CP017060.1|WP_000092763.1|3644635_3645970_-|type-I-glutamate--ammonia-ligase
MSRYTKEDIFRLAKEENVKYIRLQFTDLLGVIKNVEIPVRQLTKALDNKMMFDGSSIEGFVRIEESDMYLYPDLDTWVIFPWTAEKGKVARLICDIYNADGTPFDGDPRNNLKRVLKEMEALGFSDFNLGPEPEFFLFKVDEKGNPTLELNDNGGYFDLAPMDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYANAIRSCDDIQTFKLVVKTIARKHGLHATFMPKPLYGVNGSGMHCNLSLFKNGENVFFDANGDLQLSDDARHFIAGILKHAPAFTAIANPTVNSYKRLVPGYEAPCYVAWSAQNRSPLVRIPASRGISTRVEVRSVDPAANPYLVMATLLAAGLDGIKNKLTPPAAVDRNIYVMTKEEREEAGIVDLPATLAQALVTLQSNEVVCGALGEHLLEHFIEAKEIEWDIFRTQVHQWERDQYMSLY
>NZ_CP017060.1|WP_000708856.1|3643637_3644297_+|helix-turn-helix-domain-containing-protein
MKKAEVVTRLIKEAGYSKRAFAEKIGLPPTTLQSMLSRGIGKASVDNVIKVCKGLGITTDDLEKLATQEDNTVKEEVSIYETIQNDQSNIIHIPIIGSVAAGTPIFAEENIEGYLPMLSTFLNKRKKYFYLTVKGTSMNLEFPDGSYVLVEETPYVENGQIAVVKVNGYDATVKKISKSGSIITLIPLSNDPIHEPKTYDLSAEDVKIIGRVVQAVKNY
>NZ_CP017060.1|WP_089171628.1|3643222_3643435_-|hypothetical-protein
MYLNLRAEMARKRIMITQISSHLKLRHATVSDKINGKFRFYYDEAFEIKKTFFPEHNLEYLFEFEENEAN
>NZ_CP017060.1|WP_089171632.1|3655810_3657165_+|IS3-family-transposase
MAKFTSDEKIQIVLRYLNGNESYREIGRSLGINDTIILNWVNQYKQNGLEAFLKRCTNYTQQFKLDVLNFMIENGMSLFETAAIFNIPAPSTISVWKKQLETQGIDALQSKKKGRPSMKKDSNKQLKQPLAEGSVEALEARIKQLEMENEYFKKVKCLSSKQGKITKQDKAQVVYELRHKYSVKVLVELATIPRSTYYDLVKKMNRPDVDADLKVEIKAIYEENEGRYGYRRIRDELTNRGQKVNHKKVQRIMKELGLKCVVRMKKYKSYKGKIGRIAPNILERNFHTDAPNQKWVTDITEFKLFGEKLYVSPVLDLYNGEIITYTIGSRPTYSLVSDMLEKALERLPETHQLLMHSDQGWHYQRRQYVRTLESRAIVQSMSRKGNCYDNAVIENFFGIMKSEFLYIKEFENVEHFKIELEKYIDYYNTKRIKAKLKMSPVQYRTHFYQAA
>NZ_CP017060.1|WP_000813896.1|3657238_3657463_-|RNA-chaperone-Hfq
MKQSINIQDQFLNQLRKENTFVTLYLLNGFQLRGLIKGFDNFTVLLETEGKQQLIYKHAISTFVPQKNVSIELE
>NZ_CP017060.1|WP_000504953.1|3657484_3658438_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MGEVQREKVAVIIGPTAVGKTKLSIDLAKALNGEIISGDSMQIYRTMDIGTAKVTQAEMDGIPHYMVDIKNPEDSFSVAEFQERVRKHIREITERGKLPIIVGGTGLYIQSVLFDYQFTDDAGDVIYREQMEKLALERGVEYVHKKLQEVDPESAERIHANNVRRVIRALEIFHTTGEKMSDQIEKQEKELLYDVSLIGLTMDREMLYDRINLRVDLMMEQGLLEEVEGLYNRGIRDCQSIQAIGYKEIYDYFENRAPLEDAVSQLKTNSRRYAKRQLTWFRNKMDVTWFDVTDGEKTSEILRYIEGKLQVKSNNSK
>NZ_CP017060.1|WP_000814431.1|3658618_3658864_+|hypothetical-protein
MKQSTINFSSLTKDLILATSTKEQNCSQEELYFALNCLLRAFHSTLHETTSHPENKNTEYIQTQFCSAYKIITGKTIYPFQ
>NZ_CP017060.1|WP_089171633.1|3658926_3659877_-|3D-domain-containing-protein
MKKLLSIATAAVFGLGIFAGSAKAETIVTTDVLNVRENPNVESKLVGKVLSGNTLDVINTENGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAPVIEKKEVVAQEEAPARTNTPVKNNTAVKNKESVKSNDSIKNVESSKPVVKEKTAAKPVAKSTETSAPTGGREITVEATAYTADPSENGSYGGRVLTAMGHDLTANPNMKVIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGSANSWGRKSVKVKVIQ
>NZ_CP017060.1|WP_000704609.1|3660226_3662083_-|PTS-fructose-transporter-subunit-IIABC
MKITELLKRDTVIMDLTASNKEAVIDELVEKLNGANRLNSKTEFKEAILKRESQSTTGIGEGIAIPHAKTKAVKQPSICFGRSVSGINYESLDGQPAHLFFMIAASEGANNTHLETLSRLSTLLMDEGFRKQLLEAKDESELLQLFDEKENEKEEEIEVAKPEGNEPYVLAVTACPTGIAHTYMAADSLKAKAAELGIAIKVETNGSTGIKNGLTKEDIERATAIIVAADKQVEMNRFAGKHVIQVPVADGIRKTENLLKRAVKQDAPIFKGVKEDGKTESIEREKGLGIYKHLMSGVSNMLPFVVGGGILIALAFSFGGIKAEGPLAELFMSIGGGKTGAFLFLVPILAGFIASSIADRPGFMPGVVGGFLAANANAGFLGGLIAGFLAGYVVLGLKRLFSGLPVQLEGIKPVLLYPVFGLLITGVVMQKVVIPPVVALNEMLTGWLNGLNGTNAILLGLILGGMMAIDMGGPINKAAFTFGIAAIEAQNFGVHSAVMAGGMVPPLAIAFATTFFKSKFTEAERKSGLTNYIMGASFITEGAIPFAAADPVRVIVSCVVGSSIAGALSMLFQITLPAPHGGLFVIALVNKPLLYIFSILIGTIVSAIMLGVWKKKVQ
>NZ_CP017060.1|WP_089171634.1|3662096_3663008_-|1-phosphofructokinase
MIYTVTLNPSIDYVVQVPSFDLGTINRAEKDMKFPGGKGINVSRVLQRLGVKNIALGFTGGFTGQFIKEVLQTEGVTTNFVQVDEDTRINVKIKGKEETELNGQGPIVTKEQFEQLMKKIESMQPGDCVVLAGSVPISIPSTFYESIAAFGAEKGIRVVVDASGSALQHVIKNKPFLIKPNHHELGELFGVELSTVEDVLPYGRKLIEQGVKHVIVSMAGEGALLFTAEGIYEATVPKGIVINSVGAGDSLVAGFVGKYEQTKDIEKAFQYGVATGSATAFSADLCKKEKVEELLSQVIVAKR
>NZ_CP017060.1|WP_000957288.1|3663004_3663757_-|DeoR/GlpR-transcriptional-regulator
MLTPERHQMILQLVKEQKVVKLQQLVERTESSESTIRRDLAQLEKQRLLKRVHGGAAVLTGKGQEPTMVEKSSKNIQIKQQIANYAASVVEQGDCIYLDAGSTTFEMIPFLINKDVTVVTNGLMHIEALVENNIRAYLLGGMMKSRTKALIGAMAQESMQKYRFDKCFLGANGVHEQLGFTTPDPEEALLKQMALTLANEGYFLIDESKFSEVAFAKIANVEDANIITNHLEIDLEKYKKQTNVIEADKQ
>NZ_CP017060.1|WP_089171635.1|3663916_3665080_-|iron-containing-alcohol-dehydrogenase
MQNFVFRNPTKLIFGKDQLEQLKTEIPQFGKKVLLVYGGGSIKRNGIYDNVISILKDINAEVFELTGVEPNPRVSTVKKGIQICKDNGVEFILAVGGGSVIDCTKAIAAGSKYDGDVWDIVTKKAFASEALPFGTVLTLAATGSEMNAGSVITNWETNEKYGWGSPVTFPQFSILDPVHTASVPRDQTIYGMVDIMSHVLEQYFHHGTNTELQDRYCESVLKTVIETAPKLLSDLENYEHRETILYCGTMALNGILAMGVRGDWATHNIEHAVSAVHDIPHGGGLAILFPNWMKHVVEENVSRFKQFAIRVFEIETDGKTDKEVALEGIEALRQFWTSIEAPATLADYGIGENEIDIMANKAMAYGEFGNFKKLNKDDVLSIYKASL
>NZ_CP017060.1|WP_000228315.1|3665197_3665740_-|DUF420-domain-containing-protein
MVDQSTNQKSYAPIVITLSVIVNAIILFLFFGPVGYEGEVHFDVTILPMLNAIFNSFTFVFLLAALFSIIKKNVKMHRGFILAAFTTTLLFCVSYLSYHYLAPATHFGGEGFIKYVYFIILITHIILAAIIVPLALFALVFGFTNQLTRHRKIVRWTMPIWLYVSLSGVIVYLMISPYYQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NZ_CP017060.1	3654487-3654522	0	1.0
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NZ_CP017060.1	3653704-3653739	1	0.972
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NZ_CP017060.1	3654037-3654072	2	0.944
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NZ_CP017060.1	3654694-3654729	2	0.944
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NZ_CP017060.1	3655135-3655170	2	0.944
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3653614-3653631	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3653659-3653676	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3653767-3653784	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3653812-3653829	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3653857-3653874	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3654100-3654117	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3654433-3654450	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3654595-3654612	0	1.0
NZ_CP017060_4	4.2\|3654226\|18\|NZ_CP017060\|CRT	3654226-3654243	18	NZ_CP017060.1	3655000-3655017	0	1.0
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3653902-3653928	0	1.0
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3654055-3654081	0	1.0
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3654505-3654531	0	1.0
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3654640-3654666	0	1.0
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3653947-3653973	1	0.963
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3654712-3654738	1	0.963
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3653992-3654018	2	0.926
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3654793-3654819	2	0.926
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3654847-3654873	2	0.926
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3655036-3655062	2	0.926
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_CP017060.1	3655090-3655116	2	0.926
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3653614-3653631	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3653659-3653676	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3653767-3653784	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3653812-3653829	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3653857-3653874	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3654100-3654117	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3654433-3654450	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3654595-3654612	1	0.944
NZ_CP017060_4	4.4\|3654343\|18\|NZ_CP017060\|CRT	3654343-3654360	18	NZ_CP017060.1	3655000-3655017	1	0.944

1. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to position: 3654487-3654522, mismatch: 0, identity: 1.0

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctactggtgctactggacctca	Protospacer
************************************

2. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to position: 3653704-3653739, mismatch: 1, identity: 0.972

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctactggcgctactggacctca	Protospacer
*********************.**************

3. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to position: 3654037-3654072, mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctaccggcgctactggtgctactggacctca	Protospacer
*********.**.***********************

4. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to position: 3654694-3654729, mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctaccggcgctactggtgctactggacctca	Protospacer
*********.**.***********************

5. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to position: 3655135-3655170, mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggcgctactggcgctactggacctca	Protospacer
************.********.**************

6. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3653614-3653631, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

7. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3653659-3653676, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

8. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3653767-3653784, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

9. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3653812-3653829, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

10. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3653857-3653874, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

11. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3654100-3654117, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

12. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3654433-3654450, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

13. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3654595-3654612, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

14. spacer 4.2|3654226|18|NZ_CP017060|CRT matches to position: 3655000-3655017, mismatch: 0, identity: 1.0

cggcgctactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
******************

15. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3653902-3653928, mismatch: 0, identity: 1.0

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcagggtgttca	Protospacer
***************************

16. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3654055-3654081, mismatch: 0, identity: 1.0

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcagggtgttca	Protospacer
***************************

17. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3654505-3654531, mismatch: 0, identity: 1.0

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcagggtgttca	Protospacer
***************************

18. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3654640-3654666, mismatch: 0, identity: 1.0

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcagggtgttca	Protospacer
***************************

19. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3653947-3653973, mismatch: 1, identity: 0.963

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcaaggtgttca	Protospacer
******************.********

20. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3654712-3654738, mismatch: 1, identity: 0.963

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcagggtgctca	Protospacer
***********************.***

21. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3653992-3654018, mismatch: 2, identity: 0.926

tggtgctactggacctcagggtgttca	CRISPR spacer
tggcgctactggacctcagggcgttca	Protospacer
***.*****************.*****

22. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3654793-3654819, mismatch: 2, identity: 0.926

tggtgctactggacctcagggtgttca	CRISPR spacer
tggcgctactggacctcaaggtgttca	Protospacer
***.**************.********

23. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3654847-3654873, mismatch: 2, identity: 0.926

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgccactggacctcaaggtgttca	Protospacer
******.***********.********

24. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3655036-3655062, mismatch: 2, identity: 0.926

tggtgctactggacctcagggtgttca	CRISPR spacer
tggcgctactggacctcaaggtgttca	Protospacer
***.**************.********

25. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to position: 3655090-3655116, mismatch: 2, identity: 0.926

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgccactggacctcaaggtgttca	Protospacer
******.***********.********

26. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3653614-3653631, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

27. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3653659-3653676, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

28. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3653767-3653784, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

29. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3653812-3653829, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

30. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3653857-3653874, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

31. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3654100-3654117, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

32. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3654433-3654450, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

33. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3654595-3654612, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

34. spacer 4.4|3654343|18|NZ_CP017060|CRT matches to position: 3655000-3655017, mismatch: 1, identity: 0.944

cggcactactggacctca	CRISPR spacer
cggcgctactggacctca	Protospacer
****.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	AP013411	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43	29813-29848	2	0.944
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	AP013669	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, * SEQUENCING IN PROGRESS *	3657-3692	2	0.944
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MN693405	Marine virus AFVG_25M416, complete genome	18961-18996	2	0.944
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MN693333	Marine virus AFVG_25M417, complete genome	18961-18996	2	0.944
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009695	Bacillus anthracis strain RA3 plasmid pXO2, complete sequence	62014-62043	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009542	Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence	87575-87604	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP010320	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 2, complete sequence	58751-58780	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009326	Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence	87544-87573	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009979	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed2, complete sequence	31718-31747	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_KU525621	Bacillus anthracis strain P.NO2 plasmid pXO2, complete sequence	41548-41577	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_014332	Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, complete sequence	42285-42314	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_012577	Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence	40191-40220	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP015778	Bacillus anthracis strain Tangail-1 plasmid pXO2, complete sequence	41763-41792	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP018905	Bacillus anthracis strain Tyrol 4675 plasmid pXO2, complete sequence	42117-42146	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP023003	Bacillus anthracis strain 14RA5914 plasmid pX02, complete sequence	71972-72001	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_AP019733	Bacillus anthracis strain PCr plasmid PCr-pXO2	77769-77798	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_AP018445	Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence	41768-41797	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP029325	Bacillus anthracis strain 17OD930 plasmid pXO2, complete sequence	30062-30091	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_012655	Bacillus anthracis str. A0248 plasmid pXO2, complete sequence	42806-42835	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_007323	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence	41763-41792	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP010854	Bacillus anthracis strain A1144 plasmid pXO2, complete sequence	41931-41960	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP007617	Bacillus anthracis strain 2000031021 plasmid pXO2, complete sequence	17312-17341	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP008848	Bacillus anthracis strain HYU01 plasmid pX02, complete sequence	41696-41725	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP006744	Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence	41728-41757	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_AP014835	Bacillus anthracis strain Shikan-NIID plasmid pXO2	41760-41789	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP029807	Bacillus anthracis strain London_499 plasmid pX02, complete sequence	41761-41790	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_002146	Bacillus anthracis plasmid pXO2, complete sequence	42261-42290	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_017727	Bacillus anthracis str. H9401 plasmid BAP2, complete sequence	41771-41800	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009314	Bacillus anthracis str. Turkey32 strain 35 plasmid unnamed, complete sequence	48618-48647	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP014178	Bacillus anthracis strain Stendal plasmid pXO2, complete sequence	41763-41792	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009475	Bacillus anthracis strain Pasteur plasmid pXO2, complete sequence	64277-64306	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009900	Bacillus anthracis strain 2002013094 plasmid pXO2, complete sequence	26769-26798	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009339	Bacillus anthracis strain Ohio ACB plasmid 2, complete sequence	61053-61082	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009462	Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence	69364-69393	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009698	Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence	38976-39005	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP009329	Bacillus anthracis strain K3 plasmid 2, complete sequence	76044-76073	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP001972	Bacillus anthracis str. A16 plasmid pXO2, complete sequence	41761-41790	4	0.867
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP047133	Bacillus anthracis str. BF1 plasmid pXO2, complete sequence	41704-41733	4	0.867
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN693092	Marine virus AFVG_25M37, complete genome	19117-19143	4	0.852
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN101228	Klebsiella phage KPN4, complete genome	23865-23891	4	0.852
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN694808	Marine virus AFVG_250M14, complete genome	26241-26267	4	0.852
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN693618	Marine virus AFVG_250M106, complete genome	26271-26297	4	0.852
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP053937	Bacillus thuringiensis strain FDAARGOS_792 plasmid unnamed, complete sequence	73751-73780	5	0.833
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	159656-159685	5	0.833
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP034685	Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence	179280-179309	5	0.833
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	128480-128509	5	0.833
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NZ_CP010087	Bacillus thuringiensis strain 97-27 plasmid unnamed, complete sequence	58552-58581	5	0.833
NZ_CP017060_2	2.1\|1788556\|30\|NZ_CP017060\|CRISPRCasFinder	1788556-1788585	30	NC_006578	[Bacillus thuringiensis] serovar konkukian str. 97-27 plasmid pBT9727, complete sequence	36922-36951	5	0.833
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MT380195	Klebsiella phage KP_LZD_B01, complete genome	76452-76478	5	0.815
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MT380195	Klebsiella phage KP_LZD_B01, complete genome	83700-83726	5	0.815
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	KX845404	Klebsiella phage vB_Kpn_IME260, complete genome	80957-80983	5	0.815
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	KX845404	Klebsiella phage vB_Kpn_IME260, complete genome	88205-88231	5	0.815
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2031953-2031979	5	0.815
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	1926-1961	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MN693099	Marine virus AFVG_25M184, complete genome	13918-13953	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019095	Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome	14786-14821	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019103	Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome	15091-15126	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019066	Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019105	Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019098	Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome	14557-14592	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019150	Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NC_026927	Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019097	Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019045	Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019037	Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome	14554-14589	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019053	Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome	14557-14592	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019096	Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome	15207-15242	6	0.833
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KJ019145	Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome	14515-14550	6	0.833
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	13201-13227	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	HQ615693	Synechococcus phage S-CRM01, complete genome	25959-25985	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	13204-13230	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	13201-13227	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	GU323708	Lactobacillus phage phiPYB5, complete genome	19366-19392	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN693099	Marine virus AFVG_25M184, complete genome	13864-13890	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN163280	Klebsiella phage KpGranit, complete genome	83358-83384	6	0.778
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN163280	Klebsiella phage KpGranit, complete genome	84561-84587	6	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	1962-1997	7	0.806
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	15013-15048	7	0.806
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	15016-15051	7	0.806
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	15013-15048	7	0.806
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	9165-9200	7	0.806
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	MN693189	Marine virus AFVG_25M326, complete genome	18918-18944	7	0.741
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	AP013669	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, * SEQUENCING IN PROGRESS *	3984-4010	7	0.741
NZ_CP017060_4	4.3\|3654280\|27\|NZ_CP017060\|CRT	3654280-3654306	27	AP013411	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43	29495-29521	7	0.741
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	16723-16758	8	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NC_031927	Synechococcus phage S-CAM7 isolate 0910CC49, complete genome	179507-179542	8	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	17641-17676	8	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	KU686213	Synechococcus phage S-CAM7 isolate 0910SB42, complete genome	182004-182039	8	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MH616795	Microviridae sp. isolate ctbh757, complete genome	1056-1091	8	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MK521907	Klebsiella phage vB_KpnS_FZ41, complete genome	71434-71469	8	0.778
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	NC_021536	Synechococcus phage S-IOM18 genomic sequence	14771-14806	9	0.75
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MN871511	UNVERIFIED: Vibrio phage vspsw1, complete genome	92878-92913	9	0.75
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MN871505	UNVERIFIED: Vibrio phage ValDsh2, complete genome	111515-111550	9	0.75
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MN871510	UNVERIFIED: Vibrio phage valsw3, complete genome	81443-81478	9	0.75
NZ_CP017060_4	4.1\|3654154\|36\|NZ_CP017060\|CRT	3654154-3654189	36	MH925094	UNVERIFIED: Vibrio phage VspSw_1, complete genome	111355-111390	9	0.75

1. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
aggtgctactggtgctactggtgcaactggacctca	Protospacer
 *********************** ***********

2. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
aggtgctactggtgctactggtgcaactggacctca	Protospacer
 *********************** ***********

3. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MN693405 (Marine virus AFVG_25M416, complete genome) position: , mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctactggagctactggccctca	Protospacer
********************* ******** *****

4. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MN693333 (Marine virus AFVG_25M417, complete genome) position: , mismatch: 2, identity: 0.944

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctactggagctactggccctca	Protospacer
********************* ******** *****

5. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009695 (Bacillus anthracis strain RA3 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

6. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009542 (Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

7. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP010320 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

8. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009326 (Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

9. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009979 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

10. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_KU525621 (Bacillus anthracis strain P.NO2 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

11. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_014332 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

12. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_012577 (Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

13. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP015778 (Bacillus anthracis strain Tangail-1 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

14. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP018905 (Bacillus anthracis strain Tyrol 4675 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

15. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP023003 (Bacillus anthracis strain 14RA5914 plasmid pX02, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

16. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_AP019733 (Bacillus anthracis strain PCr plasmid PCr-pXO2) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

17. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_AP018445 (Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

18. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP029325 (Bacillus anthracis strain 17OD930 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

19. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_012655 (Bacillus anthracis str. A0248 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

20. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_007323 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

21. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP010854 (Bacillus anthracis strain A1144 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

22. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP007617 (Bacillus anthracis strain 2000031021 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

23. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP008848 (Bacillus anthracis strain HYU01 plasmid pX02, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

24. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP006744 (Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

25. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_AP014835 (Bacillus anthracis strain Shikan-NIID plasmid pXO2) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

26. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP029807 (Bacillus anthracis strain London_499 plasmid pX02, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

27. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_002146 (Bacillus anthracis plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

28. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_017727 (Bacillus anthracis str. H9401 plasmid BAP2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

29. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009314 (Bacillus anthracis str. Turkey32 strain 35 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

30. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP014178 (Bacillus anthracis strain Stendal plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

31. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009475 (Bacillus anthracis strain Pasteur plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

32. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009900 (Bacillus anthracis strain 2002013094 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

33. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009339 (Bacillus anthracis strain Ohio ACB plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

34. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009462 (Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

35. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009698 (Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

36. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP009329 (Bacillus anthracis strain K3 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

37. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP001972 (Bacillus anthracis str. A16 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

38. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP047133 (Bacillus anthracis str. BF1 plasmid pXO2, complete sequence) position: , mismatch: 4, identity: 0.867

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattgaataaaagcaata	Protospacer
********************.****..**.

39. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN693092 (Marine virus AFVG_25M37, complete genome) position: , mismatch: 4, identity: 0.852

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcaaggtgctac	Protospacer
******************.****.*

40. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN101228 (Klebsiella phage KPN4, complete genome) position: , mismatch: 4, identity: 0.852

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggtcctcagggtccaca	Protospacer
************ ********* . **

41. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN694808 (Marine virus AFVG_250M14, complete genome) position: , mismatch: 4, identity: 0.852

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggaactcagggtataga	Protospacer
************* ********.*  *

42. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN693618 (Marine virus AFVG_250M106, complete genome) position: , mismatch: 4, identity: 0.852

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggaactcagggtataga	Protospacer
************* ********.*  *

43. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP053937 (Bacillus thuringiensis strain FDAARGOS_792 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattaaataaaaggaata	Protospacer
****************.***.**** .**.

44. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 5, identity: 0.833

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattaaataaaaggaata	Protospacer
****************.***.**** .**.

45. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 5, identity: 0.833

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattaaataaaaggaata	Protospacer
****************.***.**** .**.

46. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattaaataaaaggaata	Protospacer
****************.***.**** .**.

47. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NZ_CP010087 (Bacillus thuringiensis strain 97-27 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattaaataaaaggaata	Protospacer
****************.***.**** .**.

48. spacer 2.1|1788556|30|NZ_CP017060|CRISPRCasFinder matches to NC_006578 ([Bacillus thuringiensis] serovar konkukian str. 97-27 plasmid pBT9727, complete sequence) position: , mismatch: 5, identity: 0.833

tatgacatatgcaattgaatgaaagtgatg	CRISPR spacer
tatgacatatgcaattaaataaaaggaata	Protospacer
****************.***.**** .**.

49. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 5, identity: 0.815

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggtcctcagggtaacaa	Protospacer
************ *********. . *

50. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MT380195 (Klebsiella phage KP_LZD_B01, complete genome) position: , mismatch: 5, identity: 0.815

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggaccgcagggaccaca	Protospacer
*************** *****  . **

51. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 5, identity: 0.815

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggtcctcagggtaacaa	Protospacer
************ *********. . *

52. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to KX845404 (Klebsiella phage vB_Kpn_IME260, complete genome) position: , mismatch: 5, identity: 0.815

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggaccgcagggaccaca	Protospacer
*************** *****  . **

53. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.815

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcatgctgcccg	Protospacer
****************** * **..*.

54. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggcgctactggcgctactggcgctac	Protospacer
************.********.********  **

55. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MN693099 (Marine virus AFVG_25M184, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctactgggtctactggagcaac	Protospacer
*********************  ******** *

56. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019095 (Synechococcus phage ACG-2014f isolate Syn7803US34, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

57. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019103 (Synechococcus phage ACG-2014f isolate Syn7803US44, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

58. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019066 (Synechococcus phage ACG-2014f isolate Syn7803C9, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

59. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019105 (Synechococcus phage ACG-2014f isolate Syn7803US4, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

60. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019098 (Synechococcus phage ACG-2014f isolate Syn7803US39, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

61. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019150 (Synechococcus phage ACG-2014f isolate Syn7803C22, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

62. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to NC_026927 (Synechococcus phage ACG-2014f isolate Syn7803C90, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

63. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019097 (Synechococcus phage ACG-2014f isolate Syn7803US37, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

64. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019045 (Synechococcus phage ACG-2014f isolate Syn7803C6, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

65. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019037 (Synechococcus phage ACG-2014f isolate Syn7803C58, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

66. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019053 (Synechococcus phage ACG-2014f isolate Syn7803C80, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

67. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019096 (Synechococcus phage ACG-2014f isolate Syn7803US36, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

68. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KJ019145 (Synechococcus phage ACG-2014f isolate Syn7803C15, complete genome) position: , mismatch: 6, identity: 0.833

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctgatggtgctactggttctac	Protospacer
****************. ************ .**

69. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggtcctcaaggtgagtt	Protospacer
************ *****.****  .

70. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to HQ615693 (Synechococcus phage S-CRM01, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
aggtgatactggacctcaaggtgtaac	Protospacer
 **** ************.*****

71. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggtcctcaaggtgagtt	Protospacer
************ *****.****  .

72. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggtcctcaaggtgagtt	Protospacer
************ *****.****  .

73. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggaccacaggggcctgt	Protospacer
*************** *****  .*

74. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN693099 (Marine virus AFVG_25M184, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcaaggacctac	Protospacer
******************.**  .*

75. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
aggtgctactggtcctcagggtaacaa	Protospacer
 *********** *********. . *

76. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN163280 (Klebsiella phage KpGranit, complete genome) position: , mismatch: 6, identity: 0.778

tggtgctactggacctcagggtgttca	CRISPR spacer
aggtgctactggtcctcagggtaacaa	Protospacer
 *********** *********. . *

77. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
cggtgctactggcgctactggcgctactggagatac	Protospacer
.***********.********.*********  *

78. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 7, identity: 0.806

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
cgatcctggtggtgctactggtgctactggtcttca	Protospacer
.*.* **. ********************* *.***

79. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 7, identity: 0.806

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
cgatcctggtggtgctactggtgctactggtcttca	Protospacer
.*.* **. ********************* *.***

80. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 7, identity: 0.806

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
cgatcctggtggtgctactggtgctactggtcttca	Protospacer
.*.* **. ********************* *.***

81. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 7, identity: 0.806

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactgctgctcctggtgctactgctgttcc	Protospacer
*********** **** ************   .**

82. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to MN693189 (Marine virus AFVG_25M326, complete genome) position: , mismatch: 7, identity: 0.741

tggtgctactggacctcagggtgttca	CRISPR spacer
aggtgctactggacctcaaggtccagc	Protospacer
 *****************.*** .

83. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.741

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcaaggaccagc	Protospacer
******************.**  .

84. spacer 4.3|3654280|27|NZ_CP017060|CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 7, identity: 0.741

tggtgctactggacctcagggtgttca	CRISPR spacer
tggtgctactggacctcaaggaccagc	Protospacer
******************.**  .

85. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 8, identity: 0.778

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
gggtgctactggggctactggagctactggaatgtt	Protospacer
 *********** ******** ********* . .

86. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to NC_031927 (Synechococcus phage S-CAM7 isolate 0910CC49, complete genome) position: , mismatch: 8, identity: 0.778

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgcttctggtgctactggtcctaaaggtgacca	Protospacer
******* ************** ***  **   .**

87. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 8, identity: 0.778

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
gggtgctactggggctactggagctactggaatgtt	Protospacer
 *********** ******** ********* . .

88. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to KU686213 (Synechococcus phage S-CAM7 isolate 0910SB42, complete genome) position: , mismatch: 8, identity: 0.778

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgcttctggtgctactggtcctaaaggtgacca	Protospacer
******* ************** ***  **   .**

89. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MH616795 (Microviridae sp. isolate ctbh757, complete genome) position: , mismatch: 8, identity: 0.778

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tggtgctactggtgctactggcactacttctccgtt	Protospacer
*********************..*****   ** .

90. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MK521907 (Klebsiella phage vB_KpnS_FZ41, complete genome) position: , mismatch: 8, identity: 0.778

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
cggcgagaaaggggctactggtgctactggtcctca	Protospacer
.**.*  *  ** ***************** *****

91. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 9, identity: 0.75

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
taacatcagtggtgttactggttctactggacctca	Protospacer
*......* *****.******* *************

92. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MN871511 (UNVERIFIED: Vibrio phage vspsw1, complete genome) position: , mismatch: 9, identity: 0.75

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tgcccttactggtggtactggtgctcctggacaaga	Protospacer
** . .******** ********** ******   *

93. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MN871505 (UNVERIFIED: Vibrio phage ValDsh2, complete genome) position: , mismatch: 9, identity: 0.75

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tgcccttactggtggtactggtgctcctggacaaga	Protospacer
** . .******** ********** ******   *

94. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MN871510 (UNVERIFIED: Vibrio phage valsw3, complete genome) position: , mismatch: 9, identity: 0.75

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tgcccttactggtggtactggtgctcctggacaaga	Protospacer
** . .******** ********** ******   *

95. spacer 4.1|3654154|36|NZ_CP017060|CRT matches to MH925094 (UNVERIFIED: Vibrio phage VspSw_1, complete genome) position: , mismatch: 9, identity: 0.75

tggtgctactggtgctactggtgctactggacctca	CRISPR spacer
tgcccttactggtggtactggtgctcctggacaaga	Protospacer
** . .******** ********** ******   *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

254964 : 262915

uncultured_virus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917311.1\|254964_255249_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	1.2e-20	54.8
WP_001029992.1\|255287_256922_+	chaperonin GroEL	A0A219YK78	uncultured_virus	1.3e-156	57.8
WP_168411617.1\|257325_258867_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	8.9e-22	31.7
WP_000833096.1\|259253_260579_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	4.1e-44	29.4
WP_000929891.1\|260724_261426_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.3e-40	36.9
WP_089170300.1\|261409_262915_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.5e-31	30.5

DBSCAN-SWA_2

306806 : 315182

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625682.1\|306806_308114_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.9e-21	25.3
WP_001170549.1\|308202_308922_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	8.0e-50	44.8
WP_000278823.1\|308914_309169_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666784.1\|309165_309849_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_089170309.1\|309832_312052_+	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	1.1e-163	41.2
WP_000879026.1\|312036_313452_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.3e-55	35.4
WP_001262442.1\|313557_314598_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.1e-67	45.9
WP_000088577.1\|314594_315182_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.6e-27	36.9

DBSCAN-SWA_3

1857001 : 1865820

Bacillus_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089170826.1\|1857001_1858288_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	3.8e-10	30.6
WP_023521720.1\|1858387_1859152_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_089170827.1\|1859392_1861153_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.3e-274	98.6
WP_000612415.1\|1861238_1861916_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.0e-123	99.6
WP_157676066.1\|1861912_1862986_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.4e-183	96.4
WP_000818985.1\|1863275_1863995_+	3-ketoacyl-ACP reductase	W8CYX9	Bacillus_phage	5.9e-61	100.0
WP_089172102.1\|1864142_1864814_+	O-methyltransferase	W8CYT3	Bacillus_phage	1.3e-62	90.5
WP_001258527.1\|1864947_1865820_+	aminoglycoside 6-adenylyltransferase	A0A1X9I6F2	Streptococcus_phage	4.0e-64	44.4

DBSCAN-SWA_4

2506271 : 2578151

Bacillus_phage(63.04%)

capsid,bacteriocin,head,tail,terminase,integrase,holin,protease,portal

attL 2517480:2517499|attR 2583563:2583582

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048564718.1\|2506271_2506601_+\|bacteriocin	heterocycloanthracin/sonorensin family bacteriocin	NA	NA	NA	NA
WP_002041181.1\|2507084_2507570_+	hypothetical protein	NA	NA	NA	NA
WP_089171088.1\|2507881_2508583_+	DUF3962 domain-containing protein	NA	NA	NA	NA
WP_089171089.1\|2508621_2509731_-\|integrase	site-specific integrase	A0A0U3U8Y8	Bacillus_phage	8.3e-147	78.4
WP_089171090.1\|2510276_2511428_+	hypothetical protein	NA	NA	NA	NA
WP_000720921.1\|2511465_2511612_+	hypothetical protein	NA	NA	NA	NA
WP_033695148.1\|2511698_2511896_+	hypothetical protein	NA	NA	NA	NA
WP_089171091.1\|2511933_2512287_-	helix-turn-helix transcriptional regulator	A0A0U3SD25	Bacillus_phage	3.7e-48	86.2
WP_000854271.1\|2512487_2512679_+	helix-turn-helix transcriptional regulator	A0A0U3SLC2	Bacillus_phage	8.3e-23	85.2
WP_089171092.1\|2512734_2513001_+	helix-turn-helix domain-containing protein	A0A0U3ULL9	Bacillus_phage	4.1e-36	92.9
WP_000390287.1\|2513000_2513165_+	hypothetical protein	A0A0U3B230	Bacillus_phage	7.2e-15	70.4
WP_089171093.1\|2513223_2514279_+	DnaD domain protein	W8CYG5	Bacillus_phage	1.5e-57	42.0
WP_089171094.1\|2514282_2514561_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	3.5e-14	62.7
WP_089171095.1\|2514553_2514913_+	cell division protein SepF	A0A1B1P7A1	Bacillus_phage	2.4e-31	51.7
WP_089171096.1\|2514931_2515099_+	DUF3954 domain-containing protein	A0A1B1P7U5	Bacillus_phage	2.3e-13	66.0
WP_089171097.1\|2515129_2515381_+	helix-turn-helix domain containing protein	A0A0K2CNP4	Brevibacillus_phage	1.9e-06	40.6
WP_089171098.1\|2515400_2515856_+	nucleoside triphosphate pyrophosphohydrolase family protein	A0A0U4IBD0	Bacillus_phage	1.3e-21	49.1
WP_089171099.1\|2516468_2517002_+	hypothetical protein	A0A1Z1DA37	Bacillus_phage	4.2e-48	51.7
WP_089172118.1\|2517028_2517349_+	hypothetical protein	NA	NA	NA	NA
2517480:2517499	attL	NA	NA	NA	NA
WP_089171100.1\|2517555_2518023_-	epimerase	NA	NA	NA	NA
WP_089171101.1\|2518149_2518368_+	hypothetical protein	NA	NA	NA	NA
WP_089171102.1\|2518530_2518758_+	hypothetical protein	NA	NA	NA	NA
WP_089171103.1\|2518726_2518888_+	DUF3797 domain-containing protein	A0A0H3UYX0	Geobacillus_virus	2.8e-19	71.7
WP_089171104.1\|2519434_2520208_-	hypothetical protein	NA	NA	NA	NA
WP_025709552.1\|2521128_2521398_+	hypothetical protein	NA	NA	NA	NA
WP_089172119.1\|2521446_2521545_+	DUF3983 domain-containing protein	NA	NA	NA	NA
WP_089171105.1\|2521565_2521754_+	hypothetical protein	NA	NA	NA	NA
WP_089171106.1\|2521852_2522023_+	hypothetical protein	A0A1B0T6D0	Bacillus_phage	5.1e-08	73.2
WP_063547394.1\|2522049_2522532_+	ArpU family transcriptional regulator	H0USV3	Bacillus_phage	7.9e-70	81.9
WP_053564381.1\|2522531_2523074_+\|integrase	site-specific integrase	A0A0S2GLG4	Bacillus_phage	3.1e-86	89.4
WP_053564380.1\|2523287_2524238_+	nucleoside hydrolase	NA	NA	NA	NA
WP_016081850.1\|2525047_2526217_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	6.1e-23	28.6
WP_000930971.1\|2526559_2526778_+	hypothetical protein	H0USV5	Bacillus_phage	3.1e-21	66.2
WP_000366404.1\|2527149_2527425_+	hypothetical protein	A0A1B1P857	Bacillus_phage	1.5e-33	73.6
WP_000333210.1\|2527881_2528049_+	hypothetical protein	A0A1B1P8J7	Bacillus_phage	8.1e-14	67.3
WP_087967795.1\|2528041_2528263_+	hypothetical protein	NA	NA	NA	NA
WP_089171107.1\|2528276_2528690_+	hypothetical protein	Q2I8B8	Bacillus_phage	6.2e-31	54.1
WP_089171108.1\|2528670_2529012_+	HNH endonuclease	D2XR61	Bacillus_phage	1.4e-52	91.8
WP_000124842.1\|2529164_2529500_+	hypothetical protein	A0A1B1P762	Bacillus_phage	2.3e-07	31.2
WP_000615659.1\|2529496_2531155_+\|terminase	terminase large subunit	A0A2H4JHE9	uncultured_Caudovirales_phage	2.3e-257	79.2
WP_089172120.1\|2531220_2532327_+\|portal	phage portal protein	A0A2H4JAJ1	uncultured_Caudovirales_phage	9.0e-186	89.6
WP_089171109.1\|2532310_2533093_+\|protease	Clp protease ClpP	A0A0A7RWX3	Clostridium_phage	4.2e-60	61.4
WP_089171110.1\|2533096_2534251_+\|capsid	phage major capsid protein	A0A2H4JHU0	uncultured_Caudovirales_phage	4.7e-201	91.4
WP_029442425.1\|2534256_2534550_+	hypothetical protein	D2XR19	Bacillus_phage	3.5e-44	91.8
WP_089171111.1\|2534551_2534905_+\|head	phage head closure protein	A0A2H4JGG7	uncultured_Caudovirales_phage	1.7e-58	95.7
WP_050843028.1\|2534906_2535251_+	HK97 gp10 family phage protein	D2XR21	Bacillus_phage	3.1e-52	93.8
WP_071730276.1\|2535247_2535577_+	hypothetical protein	D2XR22	Bacillus_phage	1.2e-53	95.4
WP_089171112.1\|2535577_2536174_+\|tail	phage tail protein	A0A2H4JDV4	uncultured_Caudovirales_phage	2.6e-110	99.0
WP_016124652.1\|2536178_2536541_+	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	1.3e-53	85.0
WP_071730280.1\|2536771_2538235_+	hypothetical protein	A0A2H4JAI2	uncultured_Caudovirales_phage	2.3e-189	86.6
WP_089171113.1\|2538452_2540606_+\|tail	phage tail tape measure protein	A0A2H4JC82	uncultured_Caudovirales_phage	1.9e-102	83.6
WP_089171114.1\|2540647_2542105_+\|tail	phage tail family protein	A0A1B1P7W7	Bacillus_phage	5.8e-156	54.8
WP_089171115.1\|2542101_2546442_+\|tail	phage tail protein	A0A0S2MVB4	Bacillus_phage	7.7e-297	43.1
WP_000429937.1\|2546457_2546787_+	hypothetical protein	A0A2H4JGF7	uncultured_Caudovirales_phage	8.4e-23	51.7
WP_000390479.1\|2546916_2547141_+	hypothetical protein	A0A1B1P780	Bacillus_phage	8.5e-27	89.2
WP_089171116.1\|2547216_2547642_+\|holin	phage holin family protein	A0A1B1P787	Bacillus_phage	8.3e-71	96.5
WP_089171117.1\|2547641_2548451_+	N-acetylmuramoyl-L-alanine amidase	D2XR33	Bacillus_phage	5.3e-151	90.7
WP_089171118.1\|2548648_2549155_-	hypothetical protein	NA	NA	NA	NA
WP_089171119.1\|2549608_2550340_-	hypothetical protein	NA	NA	NA	NA
WP_089171121.1\|2551156_2552047_+	bclA protein	NA	NA	NA	NA
WP_157676091.1\|2552337_2554020_+	DUF3893 domain-containing protein	NA	NA	NA	NA
WP_048535392.1\|2554226_2554991_+	DUF3959 family protein	NA	NA	NA	NA
WP_089171123.1\|2555135_2555552_+	DUF3995 domain-containing protein	NA	NA	NA	NA
WP_086395992.1\|2555672_2555876_+	hypothetical protein	NA	NA	NA	NA
WP_089171124.1\|2556205_2556418_-	hypothetical protein	NA	NA	NA	NA
WP_089171125.1\|2556627_2557632_+	DUF1835 domain-containing protein	NA	NA	NA	NA
WP_000282680.1\|2557777_2558182_+	hypothetical protein	NA	NA	NA	NA
WP_089171126.1\|2558341_2559577_+	cytochrome P450	NA	NA	NA	NA
WP_000106403.1\|2559844_2561128_+	MFS transporter	NA	NA	NA	NA
WP_089171127.1\|2561117_2561750_+	Vat family streptogramin A O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	3.5e-25	42.4
WP_000046095.1\|2561819_2561975_+	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_000289124.1\|2562077_2562575_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000168009.1\|2562715_2563930_+	cytochrome P450	NA	NA	NA	NA
WP_089171128.1\|2564041_2564620_+	cysteine dioxygenase family protein	NA	NA	NA	NA
WP_089171129.1\|2564795_2565647_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_157676092.1\|2566069_2567857_+	PAS domain-containing protein	NA	NA	NA	NA
WP_089171130.1\|2568091_2570218_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_089171131.1\|2570657_2571845_+	UDP-glucosyltransferase	A0A2H4ZK81	Cryptophlebia_leucotreta_granulosis_virus	8.9e-06	24.1
WP_089171132.1\|2571935_2572616_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_089171133.1\|2573024_2573573_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_089171134.1\|2573583_2575284_+	energy-coupling factor ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	1.8e-15	29.5
WP_089171135.1\|2575276_2576077_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000120182.1\|2576213_2576321_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_016081432.1\|2576413_2577682_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.2e-24	29.1
WP_089171136.1\|2577818_2578151_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0T6A8	Bacillus_phage	2.2e-15	43.7
2583563:2583582	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2585263 : 2590487

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001139345.1\|2585263_2585479_-	spore germination protein	A0A2H4J3A3	uncultured_Caudovirales_phage	3.4e-25	83.8
WP_114556335.1\|2585715_2585847_+	DUF3983 domain-containing protein	A0A1B1P7V8	Bacillus_phage	1.1e-10	76.7
WP_000097509.1\|2586211_2587012_+	C1 family peptidase	A0A2K9L1Z4	Tupanvirus	1.0e-37	37.2
WP_089171140.1\|2587031_2587244_+	hypothetical protein	NA	NA	NA	NA
WP_089172124.1\|2587308_2587509_+	N-acetylmuramoyl-L-alanine amidase	D2XR33	Bacillus_phage	9.7e-14	86.4
WP_089171141.1\|2587646_2588528_-	serine/threonine protein kinase	NA	NA	NA	NA
WP_089171142.1\|2588655_2589171_+	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	4.6e-15	35.4
WP_016081420.1\|2589269_2589800_+	hypothetical protein	NA	NA	NA	NA
WP_089171143.1\|2589812_2590487_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.2e-28	30.7

DBSCAN-SWA_6

3634125 : 3644297

Bacillus_phage(50.0%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413738.1\|3634125_3634746_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	8.2e-19	62.2
WP_089171624.1\|3634837_3635641_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_000031386.1\|3635641_3636184_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_001102628.1\|3636176_3636500_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000392443.1\|3636864_3637095_-\|bacteriocin	bacteriocin biosynthesis protein	A0A1B1P7Q9	Bacillus_phage	1.7e-25	77.6
WP_063548393.1\|3637156_3638059_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A0S2MVR5	Bacillus_phage	4.0e-75	48.4
WP_089171625.1\|3638347_3639169_-	M23 family metallopeptidase	A0A218KCJ1	Bacillus_phage	6.4e-27	43.1
WP_089171626.1\|3639310_3640282_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.4e-33	39.9
WP_000464425.1\|3640520_3640907_-	DUF1492 domain-containing protein	A0A288WG73	Bacillus_phage	2.6e-47	71.4
WP_089171627.1\|3641025_3641913_-	DnaD domain protein	A0A2H4J394	uncultured_Caudovirales_phage	5.3e-96	68.2
WP_001189064.1\|3642061_3642256_-	hypothetical protein	A0A2H4J4V8	uncultured_Caudovirales_phage	5.9e-16	71.0
WP_089171628.1\|3643222_3643435_-	hypothetical protein	A6M975	Geobacillus_virus	1.6e-11	63.0
WP_000708856.1\|3643637_3644297_+	helix-turn-helix domain-containing protein	A0A2H4J441	uncultured_Caudovirales_phage	8.7e-35	41.0

DBSCAN-SWA_7

4432005 : 4439689

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088024405.1\|4432005_4432929_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-45	43.5
WP_061660443.1\|4433054_4433990_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.1e-22	25.0
WP_075719095.1\|4433991_4434684_-	response regulator transcription factor	B5LWA6	Feldmannia_species_virus	2.3e-06	27.9
WP_001293578.1\|4434852_4435026_+	hypothetical protein	NA	NA	NA	NA
WP_001014310.1\|4435026_4435221_+	YwbE family protein	NA	NA	NA	NA
WP_053563583.1\|4435259_4436459_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.6e-71	41.0
WP_000587818.1\|4436752_4437076_+	heme oxygenase	NA	NA	NA	NA
WP_071731437.1\|4437148_4437913_-	class B sortase	NA	NA	NA	NA
WP_069356275.1\|4437945_4438716_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.6e-14	29.1
WP_001036841.1\|4438705_4439689_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.2e-17	26.9

DBSCAN-SWA_8

4832551 : 4874358

Prochlorococcus_phage(16.67%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065229511.1\|4832551_4833229_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_157676151.1\|4833327_4834122_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_000248588.1\|4834174_4834483_-	YuzD family protein	NA	NA	NA	NA
WP_000431159.1\|4834678_4834915_+	NifU family protein	Q58MC7	Prochlorococcus_phage	2.0e-10	46.6
WP_001125507.1\|4835110_4835326_+	hypothetical protein	NA	NA	NA	NA
WP_088025375.1\|4835387_4836389_-\|coat	spore coat protein CotS	NA	NA	NA	NA
WP_000665102.1\|4836509_4837001_+	phosphatidylglycerophosphatase A	G3MBC5	Bacillus_virus	4.6e-41	54.5
WP_088025373.1\|4837024_4837504_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_089171927.1\|4837666_4838770_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_089171928.1\|4838714_4840061_+	phosphoribosyltransferase domain-containing protein	NA	NA	NA	NA
WP_089171929.1\|4840066_4841179_+\|protease	cysteine protease StiP family protein	NA	NA	NA	NA
WP_157676153.1\|4841175_4841991_+	HAD hydrolase family protein	NA	NA	NA	NA
WP_089171930.1\|4842546_4843128_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_000276470.1\|4843256_4844021_-	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_089171931.1\|4844128_4844761_-	transcriptional regulator	NA	NA	NA	NA
WP_000274010.1\|4844841_4845282_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_000439090.1\|4845429_4846401_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_000392611.1\|4846417_4846684_+	DUF3055 domain-containing protein	NA	NA	NA	NA
WP_089171932.1\|4847057_4847555_+	cytoplasmic protein	NA	NA	NA	NA
WP_089171933.1\|4847600_4847918_-	DUF1027 domain-containing protein	NA	NA	NA	NA
WP_089171934.1\|4848033_4848612_+	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA
WP_089171935.1\|4848646_4849381_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_016079840.1\|4849481_4850297_+\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_089171936.1\|4850322_4850754_-	hypothetical protein	NA	NA	NA	NA
WP_088022016.1\|4850887_4851442_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_000272751.1\|4851516_4851996_+	YbaK/EbsC family protein	NA	NA	NA	NA
WP_000166367.1\|4852016_4852913_-	lipoyl synthase	NA	NA	NA	NA
WP_000944681.1\|4853102_4854086_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_089171937.1\|4854159_4854891_-	sporulation protein YunB	NA	NA	NA	NA
WP_089171938.1\|4854945_4855248_-	DUF1805 domain-containing protein	NA	NA	NA	NA
WP_078401288.1\|4855313_4856705_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_001118824.1\|4857254_4858652_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_000009523.1\|4858700_4859132_-	iron-sulfur cluster assembly scaffold protein SufU	A0A0K1LS29	Mycobacterium_phage	1.5e-14	37.6
WP_001020767.1\|4859121_4860342_-	cysteine desulfurase SufS	Q2XUY6	environmental_halophage	2.3e-118	47.6
WP_089171939.1\|4860341_4861634_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_000929163.1\|4861649_4862435_-	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	7.0e-07	26.1
WP_000722399.1\|4862673_4863480_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000735081.1\|4863553_4864366_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000359401.1\|4864389_4865055_-	ABC transporter permease	NA	NA	NA	NA
WP_000601791.1\|4865047_4866073_-	methionine ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_001242140.1\|4866484_4866829_-	hypothetical protein	NA	NA	NA	NA
WP_002025020.1\|4866981_4867290_-	thioredoxin family protein	NA	NA	NA	NA
WP_000640870.1\|4867293_4867638_-	hypothetical protein	NA	NA	NA	NA
WP_000026896.1\|4868150_4868534_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_000218968.1\|4868575_4868941_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.1e-21	48.6
WP_000826910.1\|4869435_4869963_-	hypothetical protein	NA	NA	NA	NA
WP_000713772.1\|4870107_4870755_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000666168.1\|4870820_4871834_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_157676198.1\|4871856_4873014_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_001002981.1\|4873053_4873302_-\|coat	spore coat protein	NA	NA	NA	NA
WP_001180555.1\|4873315_4873501_-	hypothetical protein	NA	NA	NA	NA
WP_089171941.1\|4873644_4874358_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018742

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018742_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018742_1

109135-109233

Orphan

Consensus_repeat	Method
GATCATGGAAGACCACCTGCACCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018742_1

>merge|NZ_CP018742|1|109135-109233|CRISPRCasFinder
GATCATGGAAGACCACCTGCACCACAACGACCTGATTATATTTCTGTTGATGGAAGCACAGGATTGGTTACTCTGGATCACGGAAGACCACCTGCACCA

>NZ_CP018742|1|1|109135-109233|CRISPRCasFinder
GATCATGGAAGACCACCTGCACCA	CAACGACCTGATTATATTTCTGTTGATGGAAGCACAGGATTGGTTACTCTG
GATCACGGAAGACCACCTGCACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018742.1\|WP_000564897.1\|117724_118108_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_000505680.1\|115680_115791_+\|YjcZ-family-sporulation-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_016083347.1\|102557_103001_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_089172379.1\|106945_107599_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_089172387.1\|119432_119630_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_089172383.1\|112129_112870_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_157676209.1\|98712_99348_+\|DUF3967-domain-containing-protein	unknown	unknown	gnl\|CDD\|379171
NZ_CP018742.1\|WP_157676210.1\|100670_102050_-\|erythromycin-esterase-family-protein	unknown	unknown	gnl\|CDD\|350610
NZ_CP018742.1\|WP_089172371.1\|96032_96371_-\|YolD-like-family-protein	unknown	unknown	gnl\|CDD\|370161
NZ_CP018742.1\|WP_089172386.1\|118264_118600_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_089172385.1\|116533_117712_+\|cytoplasmic-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_172805532.1\|107953_109054_+\|aspartate-phosphatase	unknown	unknown	gnl\|CDD\|376220
NZ_CP018742.1\|WP_089172384.1\|114605_115394_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_157676208.1\|98083_98233_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_061665820.1\|118831_119152_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018742.1\|WP_089172372.1\|96367_97633_-\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|176454
NZ_CP018742.1\|WP_089172375.1\|103447_104878_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP018742.1\|WP_089172374.1\|99481_100342_+\|bacteriophage-abortive-infection-AbiH-family-protein	unknown	unknown	gnl\|CDD\|379523
NZ_CP018742.1\|WP_000728339.1\|116091_116475_-\|DUF1433-domain-containing-protein	unknown	unknown	gnl\|CDD\|284628
NZ_CP018742.1\|WP_089172382.1\|109962_111600_+\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173869

Protein	Function_ID	Function_description	E-value
NZ_CP018742.1\|WP_089172371.1\|96032_96371_-\|YolD-like-family-protein	gnl\|CDD\|370161	pfam08863, YolD, YolD-like protein. Members of this family are functionally uncharacterized. However it has been predicted that these proteins are functionally equivalent to the UmuD subunit of polymerase V from gram-negative bacteria. This family has been shown to belong to the WYL-like superfamily.	1.09399e-26
NZ_CP018742.1\|WP_089172375.1\|103447_104878_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.04175e-16
NZ_CP018742.1\|WP_172805532.1\|107953_109054_+\|aspartate-phosphatase	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	9.98858e-16
NZ_CP018742.1\|WP_157676210.1\|100670_102050_-\|erythromycin-esterase-family-protein	gnl\|CDD\|350610	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins. This group contains erythromycin esterase, which shares conserved active site residues of the Tiki/TraB family. Erythromycin esterases (EreA and EreB) disrupt erythromycin via the hydrolysis of the macrolactone ring. A critical catalytic histidine acts as a general base in the activation of a water molecule. Macrolides act by inhibiting bacterial protein synthesis by binding at the exit tunnel of ribosomal subunit 50s, blocking the translation of the polypeptide. Erythromycin esterase, typically found in integrons and transposons, confers antibiotic resistance through the disruption of the drug ring structure. EreB substrate profile is substantially broader than that for EreA, being able to also metabolize semisynthetic derivatives such as azalide azithromycin.	1.7072e-76
NZ_CP018742.1\|WP_089172372.1\|96367_97633_-\|Y-family-DNA-polymerase	gnl\|CDD\|176454	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V. umuC subunit of Pol V. Pol V is a bacterial translesion synthesis (TLS) polymerase that consists of the heterotrimer of one umuC and two umuD subunits. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Pol V, RecA, single stranded DNA-binding protein, beta sliding clamp, and gamma clamp loading complex are responsible for inducing the SOS response in bacteria to repair UV-induced DNA damage.	2.14549e-116
NZ_CP018742.1\|WP_157676209.1\|98712_99348_+\|DUF3967-domain-containing-protein	gnl\|CDD\|379171	pfam13411, MerR_1, MerR HTH family regulatory protein.	1.14743e-05
NZ_CP018742.1\|WP_089172374.1\|99481_100342_+\|bacteriophage-abortive-infection-AbiH-family-protein	gnl\|CDD\|379523	pfam14253, AbiH, Bacteriophage abortive infection AbiH. This family of proteins confers resistance to bacteriophage.	1.32305e-38
NZ_CP018742.1\|WP_000728339.1\|116091_116475_-\|DUF1433-domain-containing-protein	gnl\|CDD\|284628	pfam07252, DUF1433, Protein of unknown function (DUF1433). This family contains a number of hypothetical bacterial proteins of unknown function approximately 100 residues in length.	3.02307e-33
NZ_CP018742.1\|WP_089172382.1\|109962_111600_+\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|173869	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding component of an ATP-binding cassette (ABC)-type oligopeptide transport system comprised of 5 subunits. The transport system OppABCDEF contains two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

>NZ_CP018742.1|WP_172805532.1|107953_109054_+|aspartate-phosphatase
MIILNNEKVTKLLNEWYKVILSKQITKATRMKEEVDEKISVLMVEKNRDLQDQNLLLYYSLLDYSYKVLINKSHVTRSDFDAVEKLTTKTIDEYLKYYYHFYKAVHNTMIANYMEAMEQFEEAERLLEYIPNDIEKAEFNYKLGELYYHLQQPLLTIKHVMKAKDIYKKHEDYVINQIECDTILGLASVTLSQFEQGEELFVKCLDMAKKHNCTRLITLIQYNLGFLYAKQGISATAIRHLIDVYKSERPYHKTVFLLAREHFKLNEIEKAQEFLIQGFDLADVEYTHHFRILRAQYDENYKQSLETAIKDGLNYFESQKLYGFMEEYSGILAKKLYQEGNHERASQYFNISYDAKELLQKGSALK
>NZ_CP018742.1|WP_089172379.1|106945_107599_-|hypothetical-protein
MKKISKVLSVAGLSLAIFGGGTIASAAEGNTADSTVKKGNVLDLSDQSNVQMSEVLTFGELVNQIAADTNKPREEISQQLMAQGKARGQSSATTLAATYRTLSTNFSVTAFYNPSLRFYCETNEWSGSFRGIKEIKHINMNRSANGLSKTFSGTVQANLEDPNRIFYIINGDFHNHGTTTFNGNVSITVGKHGSVGFTTSYATDHYKYLYKEGNVYF
>NZ_CP018742.1|WP_089172375.1|103447_104878_+|IS4-family-transposase
MNPIISNELNLFAQELQYFLSPAVLQDIAKQVGFVQRSSKYQANELIALCVWFSQEIASTSLAQLCSQLEVSTGVLMSPEGLNQRFNPAAVAFLREVFTSLLTQKICSNHSLSAHVISAFNRIRILDATVFQLPDHFATDYQGSGGSSNTAGVKIQLEYDLLSGQFLNVQLGPGKNNDKTYGTICLETVEADDLCLRDLGYFDLGDLQTIHDRKAYYISRLKLNTRIYIKNPEPEYFNNGALKKQTEYIQLDMTQMLSGLIPGETMEIPEAYIGQNQKLPARVIIHRLTDDQTQTRLKNQAIREKKKGIVMKDKSKRLMSMNVYITNTSLEEVPTNYVHSLYSLRWQIEILFKTWKSFFEIDECKNIKRERLECHLYGQLIGILLCSSTMFQMRRFLLEKKKQELSEYKAIYMIKDYFPLLFQAIAVGTEELLKILHRLYRLLKKNGRKCHRYKKMTVFDILGIVYKTTVKYRQAA
>NZ_CP018742.1|WP_016083347.1|102557_103001_-|hypothetical-protein
MFNNLGISFLWLLLAYGVATLIVFIHMLISNKYFGVQNAKQAGTTFLKSPVYVKSRPYQVLYNVAIFPVFLWLYSKGIDTDNVKEFMLNTVIQWTALSIIIDYLSWVLIPHKFRLTHKEFYIDYQPYITLIYVAIFISHYIVGFFII
>NZ_CP018742.1|WP_157676210.1|100670_102050_-|erythromycin-esterase-family-protein
MHKKWKLGLMSTLLACTTFTSVAFAAEKPVDQPKWEEWLNGHAKRLNEPTSQTTEDLSFLKEAVQDKRIVVLGESTHGAKEMNQSKIRMIKYLHEEMGYDVIAFETGLGEAAAVQQNFDHLTATEAMKQSLYPVWQTEELEQLFTYMKEQKEKGKPLTLAGFDMNLFYNSSFRSYAKEWLQKLNPEVASEFDTAVSELIELDRYYSKYEGTYPYDRFKAEIQPVINKFEKVRTFIQNHKSELTQVAPHAAYDVHFLEKAISIRIDAIKTHLDADMKVRGGIPSPNLTDYSFYIRDRKMAQNFAWLTEMQYKNKKIIVWGHNYHIRKQNSKMILDWTKAQQYNYVGPNMMDYLPQRIKDQMYTIGVFAYSGSSWDDVNEDVIPVHNEHEEQSVEKIISTVGSPHVFVNLRGESNRPETSWMFTPTAASYWGKKEREEIMIPTEQYDGILWLEKTSPSVLK
>NZ_CP018742.1|WP_089172374.1|99481_100342_+|bacteriophage-abortive-infection-AbiH-family-protein
MNNLFIIGNGFDLAHNIESKYEHFKSYLKSNFPDEISNWKEEDSFNGDISEDSGMMFRLLFKAIDRTEGGEWSNLEETLGVLDYDDFLRCNGYQNDDILLETLESRTEVFREEFDTWVNEISIEKAKKKVDFAKFIGVNDLFINFNYTRTLEDVYNVDEGAILHIHGVSGDRVEFGHGADHRDLASEGERSIHEKFRKSTDGIVEKHGEFLKKRIPAGEITQIYAFGFSYGYVDQVYLREIFKGLGDTRGITWFFNSFDIEREEEFKEILEECGFNGKHARYTVES
>NZ_CP018742.1|WP_157676209.1|98712_99348_+|DUF3967-domain-containing-protein
MSEAEIIYTSNEVYSRLGVSGSTLRKYSDVLEREGYDVRKNSRGRREYTEFDVVLIEQLVELSKQDGMTLEKAAKMIAKQFGIDNKKEESQESDPVPYQMQYQFQQQYSAMIEEINMVQQANLLEMEKRLGDRMDQRNKLIEEDIKERNKLIREDMKDRKEREERIEKRLELRDDNLMKMVREIQDAKRTIVLAQEEIAAAKKKSWWEFWK
>NZ_CP018742.1|WP_157676208.1|98083_98233_+|hypothetical-protein
MNKLRRYPREPGDSDPDPAPDPPDPIDPPQTGGPFNFKKSKKNNKYSSQ
>NZ_CP018742.1|WP_089172372.1|96367_97633_-|Y-family-DNA-polymerase
MYDYSILPNRIILCVDLRSFYASVSCIKMGLDPMHTKLAVVGDVNRNGSIVLAATPPLKALGLKKMARLYEIPRRKDILVVNPIMSTYIKCSNYITKLALQYVPIEDFHQYSIDEFFMDITDSIHLFAQDPYEFAMKFKREIYDHTRIECTIGISCNPLMSKVALDIEAKKNKNGIAFWKYEDVPTKLWSIRPLNKFWGISYKTEEKLNRKGIYSIGDLANYPLKYLKQSFGKIGEELHLHSHGIDFSRISEKYVPATTSIGKSQILMRDYTIEEFPIILLEHIEEVCYRLRRQNKLAQTVHFSVGYSKDYNGGIRKTHTLNRPTNLTMDIYHICTYFLHQQYTGEPIRSINISLTNLIQEGEEQISLFDNVTRREQEVKLTKVMDEIRTKFGKNSILRGISYTHSATTRHRNSLIGGHKA
>NZ_CP018742.1|WP_089172371.1|96032_96371_-|YolD-like-family-protein
MNNANMPKGRGMVKWAPFAALTPQFDGIREIIKEQHKVTRPILTNEEKERIENMLLCSLVSAEEIMITYYEDGYLLSNYMTVVDIDPSTTIICTDAFYNKMTIQFSNIIDVK
>NZ_CP018742.1|WP_089172382.1|109962_111600_+|peptide-ABC-transporter-substrate-binding-protein
MLKKVTPIMAAVLGASFLLTACSSEKKENTAKANNKDSKTQYIHLPYIAEIPTMDVTKATDGESMNVMKNVFEGLYTLGEGNKPIPAVAKSYDVSEDKKTYTFHLRDSKWSNGTPVTAEDFLFSWKRAVNPDIAAEYAFLFFDIKNAKKINSKELPVDQLGIKAIDDKTLEIQLEQPVPYFIDLTTFATFLPINEKYFESKGKQYGLEADQLVYNGAFTLDNWKHEQGFQLKKNPNYWDAKTVKLDEINFDIVKDKSTEINLYESGQLDRVGLTGEFVDKYRKNPDFKERSEVTVQFLRMNQKNEVLKNKNARLAISQAMNKKAFVDTVLNNGSLPADGLIPADFAKSSDGKDFRKENGTLVKDDVKAAKENWKNAKQEFGKEQVTLELLTSDNVFAKKNAEYLKGELEKNLEGLTVNVKPQPRKQQIQLLLNSDYELGVDVWGPDIPDPITFLDLFTTDSTYNFDKYSNKQYDELIHQVKTNLAGDEAARWEAMKQAEKILLEDGAVAPFYQQGRSYLQRSSVKGIVTNDFGGEFNYKWTEVKK
>NZ_CP018742.1|WP_089172383.1|112129_112870_+|hypothetical-protein
MELTTHTKDLLINNGNTAFIEHIELLDEFYRIYFIKDLTIQGPKPKNLIGQNLLIFIQTNLYRVKSFSRGYIESLNQQNPLCSAILVRALFETTGAIAFAHKKYIQFKEQVLTEEEFDSNLLKLYLGTKDKINLPESPDPFNVMKLIDAADHFLKKKYGYTDNKFRKGYDNLSELTHPNSFGYLLGHTVSKDLKNIHFTVNNEEFSLKKYEFEAFLFTTHFYKKIFMELRELVEQNEELPFAEFKS
>NZ_CP018742.1|WP_089172384.1|114605_115394_+|hypothetical-protein
MRNLFYFILTFISLILLTSCGVTAEEKKETEASLEKQVQKSIESLKSDEVLTKYLTNVKYEKDVDSDDTNLHYNILGTLNDSFEELKEAEQFAFISHSIDKIHEVNKENNGDLSCGRLFLCDIWYVEFSTNKEKYRMFYEDPNINNMNGEERTLVVGDRFEFNSKGILVIDRKDNSINSSTTKANSSTKDGNDWLKMGDSQKYSTVTTILTSLKSNGYTVLENADWFVDALNAFYGVDATNGTKITEAIILAGLAGKVITKP
>NZ_CP018742.1|WP_000505680.1|115680_115791_+|YjcZ-family-sporulation-protein
MGFGGSCGGGCGFAGGFALLVVLFILLIIVGASCCC
>NZ_CP018742.1|WP_000728339.1|116091_116475_-|DUF1433-domain-containing-protein
MKKKLVIILSIICIIAGGYFTMEYLKQKEKEERFWKVQEARIEKYIHYNIQDVKSITFIEHKISPMGVPHIKGYINDNRELWFDAGLDDNDTFERKLGRSGELGKLIKDPEKSVSEIEKEEKEKKQE
>NZ_CP018742.1|WP_089172385.1|116533_117712_+|cytoplasmic-protein
MSEFKRNSNITDEDFFNLSDYVYDNDYLHKGAEIPGINGETWVVIESIDANYQKVKNGLQAIAVVPKKDYEGNKTHYETIVFAFRGTEPKQLADFETDIDQITFGIKTNSKVITPSNSQTIKPDSATSFNTGLEWVDKVNKTYHPTYVHATGHSKGGAEADYVASERNFYATTWAAPNPYGLLSPEAKKRVDKGEMENKATDYTHENDPIGNHTQFGAPLIGKQFTVRQNDTKEGLFTRLTMEGHGRDTFRGSFHSNGSPILKLEPEDIIRQAKRIQTLSNRLSDIVKNIVEFQRNEAEAVQKLKNQLKHETGPGGRYHLLEEHEVDEAISQIAKIRKGGNDYFHDANLAEELIHLLKKEQKSLSRFGDDISDAANSLRDKDNQLASNFQIK
>NZ_CP018742.1|WP_000564897.1|117724_118108_+|hypothetical-protein
MIDFMGEIKKIEKQIENAAGDLANQVVDELQAAKKQIEKEMQRMMLKTEVEFKSIDIIKEDTYALQKNIGIFHDLQTNTRDIASELEKSFESKTGSKINETLKKYEKQINNKIFNEHVHLANSCGKK
>NZ_CP018742.1|WP_089172386.1|118264_118600_-|hypothetical-protein
MTVRKEKVTRRVVCRKCKSDQVVGNKRGYNFKRMFLILFLMVVAFLSLGFFSVYLIHAPSSPFRVMSNIVANIFGFIMFLGLPIGIFSGFIGKKNIVNGCMNCGYTWMPKK
>NZ_CP018742.1|WP_061665820.1|118831_119152_-|hypothetical-protein
MTVQKEKVTRRVVCRKCKSDQIVGNKRGYNFKRMFLILFLMLATLIAIRIVVEIVPRDSPLQGMALFVVFLMMLLGAPITLFSGFIGRKNIVNGCMNCGHTWMPKK
>NZ_CP018742.1|WP_089172387.1|119432_119630_-|hypothetical-protein
MGDVYGGLKYFAFLLVLVFSVGFIIRWIFRDVISLDQLLGLGIGIITLIMAFFIKKYSKELNTNS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018742_1	1.1\|109159\|51\|NZ_CP018742\|CRISPRCasFinder	109159-109209	51	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	109159-109209	0	1.0

1. spacer 1.1|109159|51|NZ_CP018742|CRISPRCasFinder matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 0, identity: 1.0

caacgacctgattatatttctgttgatggaagcacaggattggttactctg	CRISPR spacer
caacgacctgattatatttctgttgatggaagcacaggattggttactctg	Protospacer
***************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP018741

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

24331 : 89606

Bacillus_phage(40.0%)

transposase,integrase

attL 18160:18175|attR 42740:42755

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
18160:18175	attL	NA	NA	NA	NA
WP_089172181.1\|24331_25492_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_089172182.1\|25720_25969_-	hypothetical protein	NA	NA	NA	NA
WP_065706020.1\|26688_27618_-	glutaminase A	NA	NA	NA	NA
WP_153218640.1\|27787_29245_-	alanine:cation symporter family protein	NA	NA	NA	NA
WP_089172183.1\|29512_30838_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_089172184.1\|31879_33385_+	spore germination protein	NA	NA	NA	NA
WP_089172185.1\|33374_34478_+	endospore germination permease	NA	NA	NA	NA
WP_089172186.1\|34474_35602_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_065705655.1\|35841_37272_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_081306186.1\|37396_37759_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_065705692.1\|37770_38673_+	DUF2268 domain-containing protein	NA	NA	NA	NA
WP_154698409.1\|40023_40197_-	hypothetical protein	NA	NA	NA	NA
WP_086422586.1\|42564_43329_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
42740:42755	attR	NA	NA	NA	NA
WP_089172187.1\|43348_43969_+	HAD family hydrolase	NA	NA	NA	NA
WP_050845109.1\|44808_45084_+	hypothetical protein	NA	NA	NA	NA
WP_016083336.1\|45432_46617_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_089172188.1\|47028_47685_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	9.9e-15	33.3
WP_089172189.1\|49539_50661_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	1.8e-173	81.0
WP_089172190.1\|50929_52108_-	MFS transporter	NA	NA	NA	NA
WP_089172191.1\|52171_52819_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_016083330.1\|52880_53561_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_089172192.1\|54232_55987_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_089172193.1\|56004_56835_-	anti-sigma factor	NA	NA	NA	NA
WP_157676200.1\|56824_57358_-	sigma-70 family RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	5.8e-05	27.8
WP_089172195.1\|58412_59156_-	hypothetical protein	NA	NA	NA	NA
WP_089172196.1\|59188_61159_-	ABC transporter permease	NA	NA	NA	NA
WP_000398180.1\|61133_61922_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.2e-32	40.4
WP_089172197.1\|62046_63033_-	sensor histidine kinase	NA	NA	NA	NA
WP_089172198.1\|63032_63737_-	response regulator transcription factor	NA	NA	NA	NA
WP_089172199.1\|64544_66677_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_000022547.1\|67366_67795_+	DUF5412 domain-containing protein	NA	NA	NA	NA
WP_089172200.1\|68226_69873_-	SgrR family transcriptional regulator	NA	NA	NA	NA
WP_089172201.1\|69975_71229_+	MFS transporter	NA	NA	NA	NA
WP_089172202.1\|71321_72476_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_078214455.1\|72694_73267_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_078214456.1\|73454_73838_+	hypothetical protein	NA	NA	NA	NA
WP_089172204.1\|74828_75260_-	hypothetical protein	NA	NA	NA	NA
WP_002169911.1\|75256_75463_-	helix-turn-helix transcriptional regulator	S5M643	Brevibacillus_phage	2.2e-05	44.6
WP_089172205.1\|76105_76411_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_089172206.1\|76407_76863_+	hypothetical protein	NA	NA	NA	NA
WP_050845500.1\|76899_77097_+	hypothetical protein	NA	NA	NA	NA
WP_089172207.1\|77576_77927_+	PH domain-containing protein	NA	NA	NA	NA
WP_089172208.1\|78043_79474_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_050822787.1\|79688_79994_+	DUF3784 domain-containing protein	NA	NA	NA	NA
WP_089172209.1\|80137_80332_-	hypothetical protein	NA	NA	NA	NA
WP_089172210.1\|80697_81120_-	NUDIX hydrolase	NA	NA	NA	NA
WP_001995951.1\|81245_81815_-	hypothetical protein	NA	NA	NA	NA
WP_089172211.1\|82123_83038_-	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_089172212.1\|83592_84432_+	SEC-C domain-containing protein	NA	NA	NA	NA
WP_089172213.1\|84533_84869_-	hypothetical protein	NA	NA	NA	NA
WP_086401219.1\|84904_85093_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_089172214.1\|85120_85456_-\|transposase	transposase	NA	NA	NA	NA
WP_089172215.1\|86169_86433_-	hypothetical protein	NA	NA	NA	NA
WP_002204218.1\|86459_86648_-	hypothetical protein	NA	NA	NA	NA
WP_172805528.1\|86763_86916_+	hypothetical protein	NA	NA	NA	NA
WP_016083347.1\|87285_87729_-	hypothetical protein	NA	NA	NA	NA
WP_089172216.1\|88175_89606_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

149090 : 179702

Bacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000762752.1\|149090_149489_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	3.1e-51	68.9
WP_089172245.1\|151463_151859_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_000167466.1\|152172_153078_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_089172246.1\|153223_154198_-	nitronate monooxygenase	NA	NA	NA	NA
WP_089172247.1\|154612_154843_-	transcriptional regulator	S5MBY6	Brevibacillus_phage	2.1e-12	43.2
WP_000762752.1\|155630_156029_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	3.1e-51	68.9
WP_089172245.1\|158003_158399_-	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_000167466.1\|158712_159618_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_089172246.1\|159763_160738_-	nitronate monooxygenase	NA	NA	NA	NA
WP_089172247.1\|161152_161383_-	transcriptional regulator	S5MBY6	Brevibacillus_phage	2.1e-12	43.2
WP_000762752.1\|162170_162569_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	3.1e-51	68.9
WP_172805530.1\|163958_165389_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	9.1e-21	27.7
WP_089172249.1\|165435_166101_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.9e-35	35.2
WP_172805529.1\|166264_166441_+	hypothetical protein	NA	NA	NA	NA
WP_089172250.1\|167039_168248_+	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	1.8e-25	30.5
WP_065705980.1\|168724_170152_+	ABC transporter permease	NA	NA	NA	NA
WP_086422647.1\|170163_170850_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-24	35.8
WP_016083288.1\|171003_171276_-	HU family DNA-binding protein	A0A1P8CWT5	Bacillus_phage	7.0e-23	61.1
WP_089172306.1\|172191_173805_+	S-layer homology domain-containing protein	A0A1J0MS59	Bacillus_phage	2.8e-42	53.7
WP_089172252.1\|174567_175518_-	class A beta-lactamase	A0A1B0VBP7	Salmonella_phage	8.3e-55	43.4
WP_089172253.1\|177120_177453_-	hypothetical protein	NA	NA	NA	NA
WP_089172254.1\|177498_177885_-	hypothetical protein	NA	NA	NA	NA
WP_033700006.1\|177902_178097_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_089172255.1\|178271_179702_+\|transposase	IS4 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017060

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018742

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP018741

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection