CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018925	Serratia marcescens strain UMH3 chromosome, complete genome	0 crisprs	DinG,csa3,DEDDh,cas3,WYL,casR,cas14j	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1298082 : 1352559

Salmonella_phage(48.72%)

integrase,capsid,head,tail,lysis,terminase,portal,holin,transposase,plate

attL 1318330:1318353|attR 1353291:1353314

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033646433.1\|1298082_1298541_-\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	2.4e-15	33.9
WP_033646432.1\|1298732_1301876_-	multidrug efflux RND transporter permease subunit SdeB	NA	NA	NA	NA
WP_033646431.1\|1301900_1303088_-	multidrug efflux RND transporter periplasmic adaptor subunit SdeA	NA	NA	NA	NA
WP_004928813.1\|1303382_1303739_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_039567114.1\|1305394_1306861_+	peptide MFS transporter	NA	NA	NA	NA
WP_033646429.1\|1306987_1307929_+	glyoxylate/hydroxypyruvate reductase GhrA	NA	NA	NA	NA
WP_033638063.1\|1308019_1308757_+	phosphatase	NA	NA	NA	NA
WP_033646428.1\|1308799_1309378_+	molecular chaperone	NA	NA	NA	NA
WP_033638740.1\|1309528_1310182_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_089187083.1\|1310250_1312284_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_004928833.1\|1312319_1312988_-	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	2.6e-18	30.5
WP_089187084.1\|1313411_1313837_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_089187085.1\|1314029_1314983_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_033642715.1\|1315014_1315245_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	6.3e-17	64.7
WP_025302449.1\|1315590_1316109_+	non-heme ferritin	NA	NA	NA	NA
WP_046686875.1\|1316401_1316818_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_060428500.1\|1316820_1317702_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_025302452.1\|1317771_1318113_+	YebY family protein	NA	NA	NA	NA
1318330:1318353	attL	NA	NA	NA	NA
WP_089187086.1\|1318396_1319485_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	1.3e-123	60.0
WP_071844562.1\|1319603_1319822_-	hypothetical protein	Q53ZE7	Salmonella_virus	6.2e-22	65.3
WP_089187087.1\|1319895_1320993_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	5.4e-122	64.9
WP_089187088.1\|1320989_1321454_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.1e-47	63.3
WP_089187089.1\|1321450_1323994_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	3.8e-155	58.5
WP_071844561.1\|1323986_1324106_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.5e-09	66.7
WP_089187090.1\|1324120_1324411_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.5e-23	60.0
WP_089187091.1\|1324471_1324987_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	6.9e-64	69.0
WP_089187092.1\|1324997_1326173_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.7e-180	81.7
WP_089187093.1\|1326368_1327544_-\|tail	phage tail protein	Q37842	Escherichia_phage	4.2e-48	52.5
WP_145957291.1\|1327583_1328327_-	hypothetical protein	NA	NA	NA	NA
WP_089187095.1\|1328332_1330480_-	hypothetical protein	A0A2D1GNM3	Pseudomonas_phage	1.3e-15	40.5
WP_089187096.1\|1330481_1331081_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	3.9e-58	60.1
WP_089187097.1\|1331073_1331982_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	3.9e-110	69.2
WP_089187098.1\|1331978_1332329_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	9.3e-28	54.1
WP_089187099.1\|1332325_1332919_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	4.0e-55	56.4
WP_089187100.1\|1333063_1333510_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.1e-36	51.4
WP_089187101.1\|1333502_1333934_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.7e-39	60.4
WP_089187103.1\|1334041_1334500_-\|lysis	LysB family phage lysis regulatory protein	E5FFH9	Burkholderia_phage	9.1e-07	49.2
WP_089187104.1\|1334496_1334994_-	glycoside hydrolase family 104 protein	S4TUB1	Salmonella_phage	7.2e-50	60.6
WP_052730619.1\|1334968_1335298_-\|holin	phage holin family protein	A0A077KER0	Ralstonia_phage	9.1e-09	41.0
WP_046373881.1\|1335300_1335669_-	hypothetical protein	NA	NA	NA	NA
WP_046373880.1\|1335673_1335877_-\|tail	tail protein X	E5G6M9	Salmonella_phage	3.4e-22	70.1
WP_089187105.1\|1335876_1336341_-\|head	head completion/stabilization protein	E5G6M8	Salmonella_phage	1.1e-41	55.2
WP_082100051.1\|1336439_1337075_-\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	4.7e-54	54.3
WP_089187106.1\|1337113_1338178_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.6e-142	73.6
WP_089187107.1\|1338238_1339072_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	5.0e-80	68.7
WP_089187108.1\|1339215_1340982_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	1.4e-300	83.7
WP_089187109.1\|1340982_1342032_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.3e-153	79.2
WP_089187589.1\|1342090_1342384_-	hypothetical protein	NA	NA	NA	NA
WP_089187110.1\|1342931_1343165_-	hypothetical protein	NA	NA	NA	NA
WP_046373869.1\|1343168_1343354_-	hypothetical protein	NA	NA	NA	NA
WP_089187590.1\|1343539_1344217_-	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	8.0e-76	64.3
WP_089187111.1\|1344317_1346792_-	replication endonuclease	F1BUS0	Erwinia_phage	1.0e-237	57.4
WP_089187591.1\|1346788_1347793_-	phosphoadenosine phosphosulfate reductase family protein	B7SYG0	Stenotrophomonas_phage	1.6e-64	42.9
WP_089187112.1\|1347831_1348089_-	hypothetical protein	NA	NA	NA	NA
WP_089187113.1\|1348085_1348265_-	hypothetical protein	NA	NA	NA	NA
WP_089187114.1\|1348267_1348531_-	hypothetical protein	NA	NA	NA	NA
WP_089187115.1\|1348527_1348746_-	hypothetical protein	NA	NA	NA	NA
WP_089187116.1\|1348739_1349564_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	F1BUN1	Cronobacter_phage	1.2e-62	45.3
WP_060429999.1\|1349566_1349785_-	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	2.7e-17	61.1
WP_089187117.1\|1349784_1350063_-	DUF2732 family protein	NA	NA	NA	NA
WP_089187118.1\|1350129_1350483_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	2.1e-27	54.5
WP_145957292.1\|1350446_1350656_-	DUF2724 domain-containing protein	F1BUS5	Erwinia_phage	1.7e-08	52.8
WP_060430006.1\|1350666_1351176_-	phage regulatory CII family protein	F1BUS6	Erwinia_phage	9.0e-48	58.0
WP_089187120.1\|1351207_1351600_-	hypothetical protein	NA	NA	NA	NA
WP_071889309.1\|1351713_1352559_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	7.4e-71	47.0
1353291:1353314	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1456775 : 1483849

Pectobacterium_phage(13.64%)

integrase,terminase,lysis

attL 1452221:1452234|attR 1478379:1478392

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1452221:1452234	attL	NA	NA	NA	NA
WP_015377612.1\|1456775_1458029_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.0e-20	92.6
WP_089187129.1\|1458153_1459281_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	8.2e-110	53.6
WP_076606770.1\|1459261_1459507_-	excisionase	NA	NA	NA	NA
WP_060559387.1\|1459583_1460087_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	2.3e-35	52.2
WP_089187130.1\|1460086_1462198_-	hypothetical protein	H9C157	Pectobacterium_phage	1.4e-102	35.8
WP_145957294.1\|1462212_1462533_-	hypothetical protein	NA	NA	NA	NA
WP_089187592.1\|1462631_1462874_-	hypothetical protein	A0A2H4JG91	uncultured_Caudovirales_phage	1.6e-15	50.7
WP_089187131.1\|1463191_1463485_-	hypothetical protein	NA	NA	NA	NA
WP_089187132.1\|1463873_1464107_-	hypothetical protein	NA	NA	NA	NA
WP_089187133.1\|1464278_1464854_-	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	2.0e-11	42.2
WP_089187134.1\|1464958_1465195_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	1.9e-16	57.7
WP_070914846.1\|1465205_1465637_+	hypothetical protein	NA	NA	NA	NA
WP_075335059.1\|1465650_1465881_+	hypothetical protein	NA	NA	NA	NA
WP_089187135.1\|1466856_1467255_+	hypothetical protein	A0A2P1JUB0	Erwinia_phage	3.5e-39	57.9
WP_089187136.1\|1467271_1467697_+	hypothetical protein	NA	NA	NA	NA
WP_089187593.1\|1467704_1469327_+	DUF4942 domain-containing protein	A0A059VA49	Pseudomonas_phage	1.6e-159	53.6
WP_089187137.1\|1469331_1470177_+	chromosome partitioning protein ParB	R9W077	Serratia_phage	3.0e-72	54.2
WP_089187138.1\|1470176_1470743_+	hypothetical protein	A0A2I7R795	Vibrio_phage	4.4e-11	42.3
WP_158524215.1\|1470908_1471058_+	hypothetical protein	Q5G8V2	Enterobacteria_phage	1.3e-07	90.0
WP_089187139.1\|1471693_1472293_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.9e-57	55.1
WP_075335058.1\|1472289_1472586_+	hypothetical protein	A0A2H4FS95	Methylophilaceae_phage	1.4e-24	51.6
WP_089187140.1\|1472582_1473272_+	antitermination protein	A0A1W6JP37	Morganella_phage	1.2e-31	36.8
WP_089187141.1\|1473357_1473633_+	hypothetical protein	NA	NA	NA	NA
WP_089187142.1\|1474349_1475021_+	hypothetical protein	NA	NA	NA	NA
WP_089187143.1\|1475001_1476117_+	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	2.7e-28	29.7
WP_070914858.1\|1476295_1476559_+\|lysis	lysis protein	Q7Y3V4	Yersinia_phage	7.0e-20	52.9
WP_089187144.1\|1476558_1477089_+	lysozyme	H9C184	Pectobacterium_phage	1.5e-85	86.3
WP_089187145.1\|1477085_1477472_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_089187147.1\|1477625_1477823_+	hypothetical protein	NA	NA	NA	NA
WP_089187148.1\|1478169_1479597_+	ParB N-terminal domain-containing protein	R4THK0	Halovirus	4.4e-100	43.7
1478379:1478392	attR	NA	NA	NA	NA
WP_049235558.1\|1479593_1479818_-	hypothetical protein	NA	NA	NA	NA
WP_070914863.1\|1479887_1480151_+	hypothetical protein	NA	NA	NA	NA
WP_089187149.1\|1480150_1481155_+\|terminase	terminase	A0A0U2RXW9	Escherichia_phage	4.8e-61	52.2
WP_048321445.1\|1481144_1482416_+	hypothetical protein	H9YPE5	environmental_Halophage	4.7e-13	28.3
WP_089187150.1\|1482427_1483849_+	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	7.0e-90	37.3

DBSCAN-SWA_3

1487191 : 1495826

Escherichia_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048321450.1\|1487191_1488223_+	hypothetical protein	A0A0U2QQI2	Escherichia_phage	2.7e-75	46.4
WP_048321451.1\|1488289_1488772_+	hypothetical protein	NA	NA	NA	NA
WP_048321452.1\|1488768_1489197_+	hypothetical protein	A0A0U2S646	Escherichia_phage	5.8e-24	40.6
WP_048321453.1\|1489193_1489628_+	hypothetical protein	NA	NA	NA	NA
WP_048321454.1\|1489611_1490550_+	hypothetical protein	A0A0U2SH76	Escherichia_phage	6.1e-50	38.3
WP_060446808.1\|1490554_1491949_+	hypothetical protein	A0A0U2KD19	Escherichia_phage	4.2e-71	37.0
WP_048321456.1\|1491952_1492390_+	hypothetical protein	A0A0U2S616	Escherichia_phage	1.9e-25	40.0
WP_077791477.1\|1492389_1492977_+	hypothetical protein	NA	NA	NA	NA
WP_049235274.1\|1493100_1495110_+	hypothetical protein	A0A2R3UAN6	Myoviridae_environmental_samples	8.3e-20	41.6
WP_089187152.1\|1495109_1495826_+	hypothetical protein	A0A0U2JGI7	Escherichia_phage	3.2e-27	36.5

DBSCAN-SWA_4

1547872 : 1579099

Moraxella_phage(33.33%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033638278.1\|1547872_1548808_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_089187594.1\|1548828_1551171_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_033653896.1\|1551316_1552081_-	molecular chaperone	NA	NA	NA	NA
WP_033646335.1\|1552105_1552660_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_072008406.1\|1552659_1553163_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_033638282.1\|1553165_1553705_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_060436242.1\|1553979_1555416_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_033647432.1\|1555518_1558149_-	PqiB family protein	NA	NA	NA	NA
WP_033638760.1\|1558117_1559365_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_049212639.1\|1559620_1560118_+	GAF domain-containing protein	NA	NA	NA	NA
WP_033638287.1\|1560214_1560925_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_033638289.1\|1560944_1562993_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	5.7e-85	33.7
WP_033638291.1\|1563303_1564182_+\|protease	protease HtpX	NA	NA	NA	NA
WP_049196132.1\|1564419_1565127_+	hypothetical protein	NA	NA	NA	NA
WP_033646331.1\|1565227_1566622_-	MFS transporter	NA	NA	NA	NA
WP_089187163.1\|1566853_1567645_+	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_089187164.1\|1567691_1568495_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_060427719.1\|1568497_1569361_-	2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
WP_089187165.1\|1569362_1570499_-	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT	G3M9Y6	Bacillus_virus	1.3e-25	33.7
WP_041034835.1\|1570495_1571506_-	2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_033653907.1\|1571681_1572401_-	phosphonate utilization transcriptional regulator PhnR	NA	NA	NA	NA
WP_060443259.1\|1572556_1573660_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_060436244.1\|1573669_1574479_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_086556888.1\|1574542_1575940_-	L-cystine transporter	NA	NA	NA	NA
WP_049212644.1\|1576115_1576664_-	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	6.4e-07	35.8
WP_089187166.1\|1577088_1577754_-	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_033646324.1\|1577818_1579099_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_5

1914275 : 1942799

Shigella_phage(28.57%)

integrase,head,terminase,holin,plate

attL 1912036:1912050|attR 1925738:1925752

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1912036:1912050	attL	NA	NA	NA	NA
WP_089187199.1\|1914275_1915151_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_145957301.1\|1917293_1917935_+\|plate	phage baseplate protein	NA	NA	NA	NA
WP_145957302.1\|1917945_1918344_+	hypothetical protein	NA	NA	NA	NA
WP_089187201.1\|1918539_1918893_+	hypothetical protein	NA	NA	NA	NA
WP_089187202.1\|1918876_1920295_+\|plate	baseplate protein	A0A291AYB2	Shigella_phage	2.5e-18	24.5
WP_089187203.1\|1920291_1921044_+	hypothetical protein	NA	NA	NA	NA
WP_089187204.1\|1921349_1921865_+	hypothetical protein	NA	NA	NA	NA
WP_089187205.1\|1921873_1922113_+	hypothetical protein	NA	NA	NA	NA
WP_089187206.1\|1922112_1922745_+	hypothetical protein	NA	NA	NA	NA
WP_089187208.1\|1923370_1923895_-	hypothetical protein	C9DGR0	Escherichia_phage	3.0e-30	41.3
WP_145957303.1\|1923894_1925220_-	hypothetical protein	E3SF63	Shigella_phage	4.2e-12	41.5
WP_089187209.1\|1925232_1926570_-	hypothetical protein	NA	NA	NA	NA
1925738:1925752	attR	NA	NA	NA	NA
WP_145957304.1\|1926889_1927240_+	hypothetical protein	NA	NA	NA	NA
WP_089187210.1\|1927354_1927915_+	hypothetical protein	NA	NA	NA	NA
WP_089187211.1\|1927880_1929254_+\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	4.7e-67	37.4
WP_089187212.1\|1929243_1930521_+	DUF1073 domain-containing protein	NA	NA	NA	NA
WP_089187213.1\|1930504_1931881_+\|head	phage head morphogenesis protein	D6PSX3	Lactobacillus_phage	2.4e-10	28.9
WP_089187214.1\|1931852_1932908_+	DUF2213 domain-containing protein	NA	NA	NA	NA
WP_089187215.1\|1933704_1934637_+	DUF2184 domain-containing protein	NA	NA	NA	NA
WP_089187216.1\|1934639_1934900_+	hypothetical protein	NA	NA	NA	NA
WP_089187217.1\|1934886_1935246_+	DUF4054 domain-containing protein	NA	NA	NA	NA
WP_089187218.1\|1935242_1935713_+	hypothetical protein	NA	NA	NA	NA
WP_089187597.1\|1935808_1936066_+	hypothetical protein	NA	NA	NA	NA
WP_089187219.1\|1936065_1936857_+	hypothetical protein	NA	NA	NA	NA
WP_089187220.1\|1936857_1938207_+	DUF3383 family protein	E5AGB4	Erwinia_phage	6.1e-35	27.3
WP_089187221.1\|1938210_1938618_+	DUF3277 family protein	NA	NA	NA	NA
WP_089187222.1\|1938653_1939127_+	hypothetical protein	NA	NA	NA	NA
WP_089187223.1\|1939272_1941186_+	tape measure protein	I6NKY8	Burkholderia_phage	2.7e-12	27.3
WP_145957305.1\|1941171_1941477_-	hypothetical protein	NA	NA	NA	NA
WP_145957306.1\|1941520_1942111_+	hypothetical protein	NA	NA	NA	NA
WP_089187225.1\|1942120_1942459_+	hypothetical protein	NA	NA	NA	NA
WP_158524216.1\|1942466_1942799_+\|holin	phage holin, lambda family	NA	NA	NA	NA

DBSCAN-SWA_6

2062176 : 2095669

Cronobacter_phage(27.03%)

terminase,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089187248.1\|2062176_2063868_-	hypothetical protein	A0A2H4PRH0	Proteus_phage	4.6e-56	55.8
WP_089187249.1\|2063871_2065104_-\|tail	tail fiber domain-containing protein	S4TSP4	Salmonella_phage	1.7e-47	52.0
WP_158524217.1\|2065178_2065340_-	hypothetical protein	NA	NA	NA	NA
WP_145957308.1\|2065410_2066400_-	hypothetical protein	NA	NA	NA	NA
WP_089187601.1\|2066401_2069605_-	host specificity protein J	F1C571	Cronobacter_phage	0.0e+00	66.2
WP_089187250.1\|2069660_2070287_-\|tail	tail assembly protein	F1C572	Cronobacter_phage	3.8e-48	51.7
WP_145957309.1\|2070329_2070689_-	hypothetical protein	NA	NA	NA	NA
WP_089187251.1\|2070746_2071460_-	peptidase P60	F1C573	Cronobacter_phage	7.8e-98	70.2
WP_089187252.1\|2071461_2072217_-\|tail	phage minor tail protein L	F1C574	Cronobacter_phage	2.8e-98	68.1
WP_089187253.1\|2072225_2072567_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	7.4e-30	54.8
WP_089187254.1\|2072610_2075565_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	2.9e-178	43.4
WP_089187255.1\|2075607_2075862_-	hypothetical protein	I6PD79	Cronobacter_phage	1.1e-19	65.2
WP_089187256.1\|2075909_2076263_-	hypothetical protein	G8C7Q5	Escherichia_phage	2.5e-28	54.8
WP_089187257.1\|2077257_2077671_-	hypothetical protein	A0A2H4J130	uncultured_Caudovirales_phage	1.2e-18	41.2
WP_089187259.1\|2077894_2078479_-	hypothetical protein	G8C7Q1	Escherichia_phage	9.7e-54	56.8
WP_089187260.1\|2078480_2078831_-	hypothetical protein	G8C7Q0	Escherichia_phage	1.3e-32	65.0
WP_089187261.1\|2078832_2079321_-	hypothetical protein	G8C7P9	Escherichia_phage	7.3e-47	57.6
WP_089187262.1\|2079359_2079614_-	Ig domain-containing protein	A0A2P1CCH3	Klebsiella_phage	7.2e-14	61.4
WP_089187263.1\|2079613_2080576_-	hypothetical protein	I6PDJ7	Cronobacter_phage	2.6e-141	81.1
WP_089187264.1\|2080579_2081278_-	hypothetical protein	I6PCW0	Cronobacter_phage	1.2e-34	60.3
WP_089187265.1\|2081341_2082454_-	hypothetical protein	I6PD76	Cronobacter_phage	2.8e-118	57.3
WP_089187266.1\|2082425_2083844_-	DUF4055 domain-containing protein	I6PDG0	Cronobacter_phage	8.9e-170	66.5
WP_089187267.1\|2083843_2085151_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.4e-147	59.0
WP_089187268.1\|2085131_2086151_-\|terminase	terminase small subunit	Q6J1S5	Burkholderia_virus	3.7e-32	37.3
WP_145957310.1\|2086232_2086496_+	hypothetical protein	NA	NA	NA	NA
WP_089187270.1\|2086538_2086820_-	hypothetical protein	G8C7W3	Escherichia_phage	1.6e-38	83.7
WP_089187271.1\|2086973_2087348_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	2.4e-05	26.4
WP_089187272.1\|2087344_2087875_-	lysozyme	H9C184	Pectobacterium_phage	1.3e-81	81.7
WP_089187273.1\|2087874_2088138_-\|lysis	lysis protein	Q7Y3V4	Yersinia_phage	9.1e-20	52.9
WP_089187274.1\|2088206_2088929_-	protein mom	A0A0C4UQZ7	Shigella_phage	8.8e-89	69.0
WP_089187275.1\|2089128_2089689_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.6e-51	56.7
WP_089187276.1\|2089685_2089973_-	DUF1364 domain-containing protein	A0A220NRL6	Escherichia_phage	1.6e-33	71.6
WP_089187277.1\|2089972_2090566_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	3.9e-95	86.2
WP_089187278.1\|2090608_2090881_-	hypothetical protein	H6WRY6	Salmonella_phage	3.6e-19	63.2
WP_089187602.1\|2090890_2091124_-	DinI-like family protein	H6WRY5	Salmonella_phage	4.0e-19	54.5
WP_089187279.1\|2091348_2091975_-	HNH endonuclease	A0A2I7RAW6	Vibrio_phage	3.3e-07	45.3
WP_089187280.1\|2091971_2092202_-	hypothetical protein	A0A1V0E8D1	Vibrio_phage	1.1e-08	47.4
WP_089187281.1\|2092198_2092582_-	hypothetical protein	NA	NA	NA	NA
WP_089187282.1\|2092619_2093156_-	replication protein	A0A0U2JGJ0	Escherichia_phage	7.0e-43	52.3
WP_089187283.1\|2094124_2094361_-	hypothetical protein	NA	NA	NA	NA
WP_089187284.1\|2094380_2094950_-	hypothetical protein	K7P7P2	Enterobacteria_phage	1.3e-18	41.2
WP_089180530.1\|2094952_2095180_-	helix-turn-helix transcriptional regulator	A0A077K9X2	Edwardsiella_phage	3.8e-14	52.2
WP_089187285.1\|2095288_2095669_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	6.5e-19	64.3

DBSCAN-SWA_7

2330072 : 2365120

uncultured_Caudovirales_phage(24.24%)

terminase,integrase,tail

attL 2347635:2347650|attR 2370285:2370300

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060431602.1\|2330072_2330471_-	hypothetical protein	Q1MVE7	Enterobacteria_phage	2.1e-23	51.2
WP_089187315.1\|2330588_2330846_-	hypothetical protein	A0A248XCT8	Klebsiella_phage	9.5e-14	55.8
WP_089187316.1\|2330842_2331217_-	hypothetical protein	A0A248XD11	Klebsiella_phage	5.3e-13	43.0
WP_089187317.1\|2331201_2331714_-	lysozyme	Q71TF3	Escherichia_phage	6.9e-48	52.0
WP_089187318.1\|2331710_2332016_-	hypothetical protein	G0ZNC7	Cronobacter_phage	5.1e-14	56.7
WP_089187319.1\|2332047_2334756_-	hypothetical protein	K4NYZ2	Pseudomonas_phage	1.0e-12	33.3
WP_089187320.1\|2334769_2336380_-\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	7.4e-229	71.0
WP_019456267.1\|2336376_2336718_-	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	4.5e-19	46.4
WP_145957311.1\|2336810_2337920_-	acyltransferase family protein	Q6QI96	Burkholderia_phage	8.9e-08	24.6
WP_089187322.1\|2337982_2340874_-	hypothetical protein	G9L6D4	Escherichia_phage	0.0e+00	73.7
WP_089187323.1\|2340873_2343579_-	transglycosylase SLT domain-containing protein	G9L6D3	Escherichia_phage	7.6e-303	60.0
WP_089187324.1\|2343578_2344106_-	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	3.8e-09	45.7
WP_089187325.1\|2344108_2344558_-	GNAT family N-acetyltransferase	I7FXT0	Pectobacterium_phage	1.4e-07	34.8
WP_089187326.1\|2344560_2346549_-	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	1.7e-179	48.2
WP_060426428.1\|2346551_2347121_-	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	4.8e-50	50.8
WP_089187327.1\|2347175_2348087_-	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	9.8e-45	39.0
2347635:2347650	attL	NA	NA	NA	NA
WP_089187328.1\|2348297_2349122_-	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	1.0e-45	42.5
WP_047568214.1\|2349108_2349342_-	hypothetical protein	NA	NA	NA	NA
WP_089187329.1\|2349341_2350964_-\|tail	phage tail protein	A0A2H4J3N6	uncultured_Caudovirales_phage	5.6e-176	58.1
WP_089187330.1\|2350967_2351186_-	hypothetical protein	NA	NA	NA	NA
WP_089187331.1\|2351196_2351676_-	hypothetical protein	NA	NA	NA	NA
WP_041034508.1\|2351704_2352001_-	hypothetical protein	NA	NA	NA	NA
WP_145957312.1\|2352003_2352291_-	hypothetical protein	NA	NA	NA	NA
WP_089187332.1\|2352278_2352584_-	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	6.2e-28	58.3
WP_089187333.1\|2352592_2353189_-	DUF1367 family protein	H9C173	Pectobacterium_phage	2.0e-75	67.2
WP_089187334.1\|2353259_2353451_-	hypothetical protein	NA	NA	NA	NA
WP_089187335.1\|2353592_2354078_-	hypothetical protein	NA	NA	NA	NA
WP_060429344.1\|2354086_2354338_-	hypothetical protein	A0A1B0V7L5	Salmonella_phage	9.3e-06	45.0
WP_089187336.1\|2354334_2354520_-	restriction alleviation protein, Lar family	A0A0U2QQP4	Escherichia_phage	1.4e-14	66.0
WP_089187337.1\|2354509_2354908_-	hypothetical protein	A0A2R3UAL4	Myoviridae_environmental_samples	9.6e-29	55.0
WP_089187338.1\|2354894_2355101_-	hypothetical protein	NA	NA	NA	NA
WP_089187339.1\|2355207_2355453_-	hypothetical protein	H9C167	Pectobacterium_phage	1.1e-11	46.3
WP_089187340.1\|2355456_2355879_-	hypothetical protein	NA	NA	NA	NA
WP_089187341.1\|2355923_2357297_-	replicative DNA helicase	Q76H51	Enterobacteria_phage	1.5e-113	48.4
WP_089187342.1\|2357293_2358013_-	helix-turn-helix domain-containing protein	A0A1W6JP36	Morganella_phage	3.2e-30	69.0
WP_060426469.1\|2358015_2358234_-	hypothetical protein	H9C163	Pectobacterium_phage	3.2e-18	60.9
WP_089187343.1\|2358257_2358710_-	hypothetical protein	H9C162	Pectobacterium_phage	4.9e-29	55.4
WP_041034483.1\|2358770_2358971_-	hypothetical protein	NA	NA	NA	NA
WP_080335416.1\|2359049_2359451_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.3e-40	59.4
WP_060426478.1\|2359982_2360297_+	hypothetical protein	NA	NA	NA	NA
WP_089187344.1\|2360307_2360727_+	hypothetical protein	NA	NA	NA	NA
WP_089187345.1\|2360762_2362925_+	hypothetical protein	H9C157	Pectobacterium_phage	6.9e-105	35.0
WP_089187346.1\|2362921_2363422_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.0e-56	69.3
WP_089187348.1\|2363856_2364123_+	excisionase	A0A1V0E5M4	Salmonella_phage	2.1e-16	61.1
WP_089187349.1\|2364064_2365120_+\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	1.1e-100	53.3
2370285:2370300	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3092794 : 3126811

Vibrio_phage(77.42%)

plate,tRNA,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033648154.1\|3092794_3094816_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_016926855.1\|3094857_3095139_-	YfcL family protein	NA	NA	NA	NA
WP_033648082.1\|3095171_3095729_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_033635385.1\|3095809_3096616_-	TSUP family transporter	NA	NA	NA	NA
WP_145957314.1\|3096748_3096949_+	hypothetical protein	NA	NA	NA	NA
WP_080430278.1\|3096963_3097422_-	hypothetical protein	NA	NA	NA	NA
WP_072269672.1\|3097632_3097839_+	transcriptional regulator	A0A2I7S995	Vibrio_phage	3.0e-18	58.2
WP_060419201.1\|3097850_3099833_+	hypothetical protein	M4M9R2	Vibrio_phage	9.5e-194	49.8
WP_060419202.1\|3099845_3100802_+	AAA family ATPase	A0A0C4UQR3	Shigella_phage	1.4e-86	52.5
WP_060419204.1\|3100798_3100996_+	hypothetical protein	NA	NA	NA	NA
WP_060419206.1\|3100998_3101211_+	hypothetical protein	NA	NA	NA	NA
WP_060419208.1\|3101218_3101836_+	DUF3164 family protein	A0A2I7S9B0	Vibrio_phage	2.0e-65	59.6
WP_072269682.1\|3101846_3102038_+	hypothetical protein	NA	NA	NA	NA
WP_060419211.1\|3102192_3102747_+	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	2.4e-25	37.8
WP_060419213.1\|3102743_3103271_+	hypothetical protein	A0A0M3LPP6	Mannheimia_phage	2.2e-28	43.0
WP_060419215.1\|3103263_3103656_+	transcriptional regulator	A0A0C4UR27	Shigella_phage	1.9e-37	64.8
WP_060451350.1\|3103665_3104151_+	hypothetical protein	NA	NA	NA	NA
WP_060419217.1\|3104256_3104838_+	N-acetylmuramidase	A0A2I7S9B9	Vibrio_phage	1.3e-39	47.0
WP_072269671.1\|3104840_3105068_+	hypothetical protein	C9DGM5	Escherichia_phage	6.0e-20	56.9
WP_060419221.1\|3105051_3105399_+	hypothetical protein	NA	NA	NA	NA
WP_060419223.1\|3105386_3105992_+	hypothetical protein	A0A2I7S9B5	Vibrio_phage	4.1e-23	40.9
WP_072269670.1\|3105991_3106231_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_060419225.1\|3106205_3106508_+	DUF2730 domain-containing protein	M1Q558	Vibrio_phage	1.5e-13	42.6
WP_060419436.1\|3106518_3106806_+	hypothetical protein	A0A2I7S9D8	Vibrio_phage	9.3e-26	63.4
WP_060419227.1\|3106808_3107093_+	hypothetical protein	NA	NA	NA	NA
WP_089187422.1\|3107082_3107658_+	DUF3486 family protein	M4MCR3	Vibrio_phage	3.4e-51	59.7
WP_060419231.1\|3107657_3109226_+	hypothetical protein	A0A2I7S9C5	Vibrio_phage	2.0e-199	71.2
WP_060419233.1\|3109225_3110803_+	DUF935 domain-containing protein	A0A2I7S9K0	Vibrio_phage	2.6e-162	56.2
WP_060419439.1\|3110795_3111641_+	hypothetical protein	M4M9M5	Vibrio_phage	2.9e-91	57.2
WP_060419235.1\|3111851_3112808_+	peptidase	M1Q578	Vibrio_phage	1.9e-78	50.6
WP_060419237.1\|3112813_3113731_+\|head	phage head protein	M4MB71	Vibrio_phage	2.7e-103	61.6
WP_145957315.1\|3113808_3114342_+	hypothetical protein	NA	NA	NA	NA
WP_060419241.1\|3114341_3114776_+	DUF1320 domain-containing protein	M1PVU7	Vibrio_phage	1.6e-37	57.0
WP_060419243.1\|3114775_3115318_+	phage virion morphogenesis protein	A0A2I7S9D7	Vibrio_phage	1.3e-57	62.0
WP_072269681.1\|3115915_3116131_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_060419248.1\|3116134_3117613_+\|tail	phage tail protein	M1Q565	Vibrio_phage	7.4e-143	52.7
WP_060419251.1\|3117622_3117973_+\|tail	phage tail protein	NA	NA	NA	NA
WP_060419253.1\|3117975_3118359_+	hypothetical protein	M1NVT1	Vibrio_phage	1.6e-20	47.9
WP_060419255.1\|3118457_3120230_+\|tail	phage tail protein	M4MHE6	Vibrio_phage	1.3e-69	33.9
WP_060419258.1\|3120229_3121489_+	multidrug DMT transporter	M4M9N2	Vibrio_phage	1.5e-72	38.3
WP_060419260.1\|3121481_3122567_+\|tail	phage tail protein	M4M9L5	Vibrio_phage	8.0e-94	50.0
WP_060419262.1\|3122557_3123097_+\|plate	phage baseplate assembly protein	A0A2I7S9F6	Vibrio_phage	2.1e-31	41.8
WP_060419264.1\|3123093_3123543_+	hypothetical protein	M1PPW1	Vibrio_phage	2.4e-28	46.1
WP_060419265.1\|3123532_3124606_+\|plate	baseplate J/gp47 family protein	M4MHE1	Vibrio_phage	1.8e-98	51.1
WP_060436665.1\|3124590_3125175_+	DUF2313 domain-containing protein	M1NVS6	Vibrio_phage	7.6e-51	49.5
WP_060419269.1\|3125174_3125927_+\|tail	tail fiber protein	A9DEM1	Yersinia_phage	2.8e-29	40.0
WP_060419271.1\|3125926_3126811_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	5.8e-26	41.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage