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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022464 Enterocloster bolteae strain ATCC BAA-613 chromosome, complete genome 8 crisprs csa3,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,PD-DExK,DinG,RT,DEDDh 0 5 8 0
NZ_CP022465 Enterocloster bolteae strain ATCC BAA-613 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP022464
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_1 145113-145213 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_2 601611-602453 TypeI NA
12 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_3 1322942-1323037 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_4 2403801-2404008 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_5 3935097-3935237 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_6 3975348-3975466 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_7 4783951-4785390 Orphan NA
21 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022464_8 6339864-6339969 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP022464_7 7.6|4784324|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784324-4784356 33 NC_019898 Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence 117190-117222 6 0.818
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 NC_019500 Enterobacteria phage Bp7, complete genome 21769-21801 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 NC_014260 Enterobacteria phage IME08, complete genome 45047-45079 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 MT682711 Escherichia phage vB_EcoM_FB, complete genome 45288-45320 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 MH791409 UNVERIFIED: Escherichia phage EcWhh-1, complete genome 105802-105834 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 NC_014792 Enterobacteria phage vB_EcoM-VR7, complete genome 42624-42656 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 KU878968 Escherichia phage WG01, complete genome 43316-43348 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 MT150133 Enterobacteria phage vB_EcoM_IME540, complete genome 89499-89531 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 NC_028925 Enterobacteria phage vB_EcoM_VR25, complete genome 43327-43359 9 0.727
NZ_CP022464_7 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784390-4784422 33 HM071924 Enterobacteria phage IME08, complete sequence 45047-45079 9 0.727
NZ_CP022464_7 7.14|4784859|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784859-4784891 33 NZ_CP015884 Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence 82401-82433 9 0.727
NZ_CP022464_7 7.16|4784992|32|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4784992-4785023 32 NZ_CP036407 Komagataeibacter saccharivorans strain JH1 plasmid p92689, complete sequence 33103-33134 11 0.656
NZ_CP022464_7 7.21|4785323|35|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR 4785323-4785357 35 NC_012528 Deinococcus deserti VCD115 plasmid 3, complete sequence 2994-3028 11 0.686

1. spacer 7.6|4784324|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 6, identity: 0.818

ctctttgattttctcatagagcacgggccttac	CRISPR spacer
atctttgattttctcatggagcacgcgctcttc	Protospacer
 ****************.******* **..* *

2. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NC_019500 (Enterobacteria phage Bp7, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

3. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NC_014260 (Enterobacteria phage IME08, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

4. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to MT682711 (Escherichia phage vB_EcoM_FB, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

5. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to MH791409 (UNVERIFIED: Escherichia phage EcWhh-1, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

6. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NC_014792 (Enterobacteria phage vB_EcoM-VR7, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aagattcacggttgtgatgattatagtcaagat	Protospacer
 * *******************.*.**.   .*

7. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to KU878968 (Escherichia phage WG01, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

8. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to MT150133 (Enterobacteria phage vB_EcoM_IME540, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

9. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NC_028925 (Enterobacteria phage vB_EcoM_VR25, complete genome) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aagattcacggttgtgatgattatagtcaagat	Protospacer
 * *******************.*.**.   .*

10. spacer 7.7|4784390|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to HM071924 (Enterobacteria phage IME08, complete sequence) position: , mismatch: 9, identity: 0.727

tatattcacggttgtgatgattgtggttttcgt	CRISPR spacer
aaaattcatggttgtgatgattatggtgatgcc	Protospacer
 * *****.*************.****  *  .

11. spacer 7.14|4784859|33|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015884 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence) position: , mismatch: 9, identity: 0.727

tctgcgcaaaatttggttgattatcttacaaat	CRISPR spacer
ttaaaacaacatttggttgattatctttcatac	Protospacer
*. . .*** ***************** ** *.

12. spacer 7.16|4784992|32|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036407 (Komagataeibacter saccharivorans strain JH1 plasmid p92689, complete sequence) position: , mismatch: 11, identity: 0.656

tttgcagccatatgaaccgggtgccggactga	CRISPR spacer
gacccagccatatgaaccggttgacggggctg	Protospacer
  . **************** ** ***. . .

13. spacer 7.21|4785323|35|NZ_CP022464|CRISPRCasFinder,CRT,PILER-CR matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 11, identity: 0.686

cagaggccgaaaagaacgcccaggcacagctttat	CRISPR spacer
tcactgccgaaaagaacgcccaggctgagctgctc	Protospacer
. .  ********************  **** . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 517428 : 541381 23 Streptococcus_phage(63.16%) integrase attL 530196:530213|attR 549055:549072
DBSCAN-SWA_2 1359483 : 1407968 49 Clostridium_phage(53.85%) portal,terminase,integrase,tail,capsid,transposase attL 1355759:1355774|attR 1401570:1401585
DBSCAN-SWA_3 3104049 : 3136110 44 unidentified_phage(78.26%) portal,terminase,tail,protease,holin,capsid,transposase NA
DBSCAN-SWA_4 5279050 : 5309746 43 uncultured_Caudovirales_phage(31.58%) portal,integrase,protease,holin,head,plate,capsid attL 5278746:5278762|attR 5310951:5310967
DBSCAN-SWA_5 5649792 : 5722371 57 Salmonella_phage(16.67%) protease,transposase,coat NA
DBSCAN-SWA_6 5735456 : 5787716 48 Erysipelothrix_phage(18.18%) transposase,integrase attL 5766750:5766765|attR 5789391:5789406
DBSCAN-SWA_7 5987019 : 6003062 19 Brevibacillus_phage(23.08%) integrase attL 5988234:5988249|attR 6003430:6003445
DBSCAN-SWA_8 6350897 : 6362539 10 Streptococcus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage