CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022525	Pseudomonas aeruginosa strain Ocean-1175 chromosome, complete genome	3 crisprs	DEDDh,RT,csa3,cas3,DinG,WYL	0	1	11	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022525_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022525_1

1518376-1518489

Orphan

Consensus_repeat	Method
TCATACCTTGCCCTCCAGTTCTTTGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022525_1

>merge|NZ_CP022525|1|1518376-1518489|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCCACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGCTCATACCTTGCCCTCCAGTTCTTTGGCC

>NZ_CP022525|1|1|1518376-1518489|CRISPRCasFinder
TCATACCTTGCCCTCCAGTTCTTTGGCC	ACGCTTCTGGATGGAGAGCCTGTTGAACGGGATACGGAGCGGGATACGCTGTGCTGGC
TCATACCTTGCCCTCCAGTTCTTTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022525.1\|WP_003084271.1\|1529933_1530599_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP022525.1\|WP_004364975.1\|1510793_1511546_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_023100736.1\|1514944_1517332_+\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP022525.1\|WP_003112942.1\|1513299_1513803_+\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP022525.1\|WP_003084303.1\|1519369_1520524_-\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP022525.1\|WP_023100735.1\|1528811_1529873_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022525.1\|WP_003112937.1\|1527179_1528556_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP022525.1\|WP_003084299.1\|1522094_1523198_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022525.1\|WP_003084339.1\|1508013_1508706_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP022525.1\|WP_003084290.1\|1524749_1526108_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP022525.1\|WP_003111119.1\|1530761_1531640_+\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP022525.1\|WP_003084301.1\|1520578_1521676_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP022525.1\|WP_003112941.1\|1513781_1514834_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP022525.1\|WP_021263265.1\|1512583_1513195_+\|thiol-disulfide-isomerase	unknown	unknown	gnl\|CDD\|239267
NZ_CP022525.1\|WP_021263263.1\|1510046_1510745_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_CP022525.1\|WP_021263266.1\|1526148_1526901_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP022525.1\|WP_003084333.1\|1508710_1509205_-\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP022525.1\|WP_003084297.1\|1523313_1524684_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP022525.1\|WP_003084327.1\|1509470_1510025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_021263264.1\|1511565_1512585_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176

Protein	Function_ID	Function_description	E-value
NZ_CP022525.1\|WP_003084271.1\|1529933_1530599_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.54898e-08
NZ_CP022525.1\|WP_003084333.1\|1508710_1509205_-\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NZ_CP022525.1\|WP_023100736.1\|1514944_1517332_+\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP022525.1\|WP_003084303.1\|1519369_1520524_-\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP022525.1\|WP_023100735.1\|1528811_1529873_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.86872e-164
NZ_CP022525.1\|WP_003112937.1\|1527179_1528556_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP022525.1\|WP_003084299.1\|1522094_1523198_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP022525.1\|WP_003112941.1\|1513781_1514834_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NZ_CP022525.1\|WP_003084301.1\|1520578_1521676_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP022525.1\|WP_003084339.1\|1508013_1508706_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NZ_CP022525.1\|WP_021263265.1\|1512583_1513195_+\|thiol-disulfide-isomerase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00343174
NZ_CP022525.1\|WP_021263263.1\|1510046_1510745_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	2.52083e-77
NZ_CP022525.1\|WP_021263266.1\|1526148_1526901_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.85062e-107
NZ_CP022525.1\|WP_003084290.1\|1524749_1526108_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP022525.1\|WP_003084297.1\|1523313_1524684_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP022525.1\|WP_003111119.1\|1530761_1531640_+\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP022525.1\|WP_021263264.1\|1511565_1512585_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	2.87573e-56

>NZ_CP022525.1|WP_023100736.1|1514944_1517332_+|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARISQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGKWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAADADSPWWDDRRTERRETRADIVRAAWNASLAHLRSTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP022525.1|WP_003112941.1|1513781_1514834_-|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP022525.1|WP_003112942.1|1513299_1513803_+|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP022525.1|WP_021263265.1|1512583_1513195_+|thiol-disulfide-isomerase
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGPIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NZ_CP022525.1|WP_021263264.1|1511565_1512585_-|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADTAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFEGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_CP022525.1|WP_004364975.1|1510793_1511546_+|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPSGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP022525.1|WP_021263263.1|1510046_1510745_-|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRIRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESAACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVLFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP022525.1|WP_003084327.1|1509470_1510025_+|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP022525.1|WP_003084333.1|1508710_1509205_-|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP022525.1|WP_003084339.1|1508013_1508706_+|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR
>NZ_CP022525.1|WP_003084303.1|1519369_1520524_-|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP022525.1|WP_003084301.1|1520578_1521676_-|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP022525.1|WP_003084299.1|1522094_1523198_-|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP022525.1|WP_003084297.1|1523313_1524684_-|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP022525.1|WP_003084290.1|1524749_1526108_-|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP022525.1|WP_021263266.1|1526148_1526901_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVANGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACGKRAGQR
>NZ_CP022525.1|WP_003112937.1|1527179_1528556_+|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP022525.1|WP_023100735.1|1528811_1529873_+|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLQPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEDGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP022525.1|WP_003084271.1|1529933_1530599_+|TetR/AcrR-family-transcriptional-regulator
MQPTSSIRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NZ_CP022525.1|WP_003111119.1|1530761_1531640_+|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES

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Crispr_ID: NZ_CP022525_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022525_2

1788316-1788463

Orphan

Consensus_repeat	Method
CTTGCCTAGGCATCGCGGAGCCTCCTTACGGCGGCTGCGCTGGAGCCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP022525_2

>merge|NZ_CP022525|2|1788316-1788463|CRISPRCasFinder
CTTGCCTAGGCATCGCGGAGCCTCCTTACGGCGGCTGCGCTGGAGCCTCCTTGCTTAGAAAACTAGAGTAGGGAAAATAAATCTGTCCCCTTTGTTCTCTTGCCTAGGCATCGCGGAGCCTCCTTACGGCGTCTGCGCTGGAGCCTCC

>NZ_CP022525|2|2|1788316-1788463|CRISPRCasFinder
CTTGCCTAGGCATCGCGGAGCCTCCTTACGGCGGCTGCGCTGGAGCCTCC	TTGCTTAGAAAACTAGAGTAGGGAAAATAAATCTGTCCCCTTTGTTCT
CTTGCCTAGGCATCGCGGAGCCTCCTTACGGCGTCTGCGCTGGAGCCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022525.1\|WP_003083569.1\|1782778_1783132_-\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|226710
NZ_CP022525.1\|WP_003083573.1\|1782116_1782782_-\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539
NZ_CP022525.1\|WP_094069662.1\|1796567_1808183_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379124
NZ_CP022525.1\|WP_021263006.1\|1790718_1791420_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP022525.1\|WP_019485604.1\|1791650_1791968_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_003111705.1\|1784344_1785718_-\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	unknown	unknown	gnl\|CDD\|227872
NZ_CP022525.1\|WP_003083582.1\|1779018_1779159_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_003083536.1\|1787555_1787951_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_003083575.1\|1781718_1782102_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP022525.1\|WP_021263010.1\|1785881_1787291_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|225715
NZ_CP022525.1\|WP_124142585.1\|1796166_1796571_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_073937341.1\|1808295_1809984_-\|two-partner-secretion-system-transporter-TpsB2	unknown	unknown	gnl\|CDD\|225387
NZ_CP022525.1\|WP_015502114.1\|1811007_1811895_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176171
NZ_CP022525.1\|WP_023100702.1\|1776365_1778198_-\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP022525.1\|WP_153549618.1\|1789683_1790673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259835
NZ_CP022525.1\|WP_023100701.1\|1779775_1781437_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_071533944.1\|1795523_1795739_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP022525.1\|WP_003097345.1\|1810691_1810907_-\|dodecin-family-protein	unknown	unknown	gnl\|CDD\|225896
NZ_CP022525.1\|WP_003111706.1\|1783162_1783849_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224379
NZ_CP022525.1\|WP_003097347.1\|1810280_1810508_-\|DUF1161-domain-containing-protein	unknown	unknown	gnl\|CDD\|369019

Protein	Function_ID	Function_description	E-value
NZ_CP022525.1\|WP_003083569.1\|1782778_1783132_-\|DUF4810-domain-containing-protein	gnl\|CDD\|226710	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown].	2.32647e-62
NZ_CP022525.1\|WP_003083573.1\|1782116_1782782_-\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	2.9667e-121
NZ_CP022525.1\|WP_021263006.1\|1790718_1791420_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.55167e-20
NZ_CP022525.1\|WP_073937341.1\|1808295_1809984_-\|two-partner-secretion-system-transporter-TpsB2	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.4072e-162
NZ_CP022525.1\|WP_003111705.1\|1784344_1785718_-\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	gnl\|CDD\|227872	COG5585, COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms].	7.71685e-56
NZ_CP022525.1\|WP_003083575.1\|1781718_1782102_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.28572e-09
NZ_CP022525.1\|WP_021263010.1\|1785881_1787291_+\|MgtC/SapB-family-protein	gnl\|CDD\|225715	COG3174, COG3174, Predicted membrane protein [Function unknown].	1.50517e-97
NZ_CP022525.1\|WP_015502114.1\|1811007_1811895_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176171	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold. TrpI and indoleglycerol phosphate (InGP), are required to activate transcription of the trpBA, the genes for tryptophan synthase. The trpBA is induced by the InGp substrate, rather than by tryptophan, but the exact mechanism of the activation event is not known. This substrate-binding domain of TrpI shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.45181e-98
NZ_CP022525.1\|WP_023100702.1\|1776365_1778198_-\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	0
NZ_CP022525.1\|WP_153549618.1\|1789683_1790673_-\|hypothetical-protein	gnl\|CDD\|259835	cd13442, CDI_toxin_Bp1026b_like, Mg-dependent tRNAse of the contact-dependent growth inhibition (CDI) system of Burkholderia pseudomallei 1026b, and related proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring cells. This model represents the C-terminal toxin domain of CdiA effector proteins. CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered. A wide variety of C-terminal toxin domains appear to exist; this particular example from Burkholderia pseudomallei 1026b and other bacteria appears to function as a Mg2+-dependent RNAse cleaving tRNA, most likely in the aminoacyl acceptor stem.	1.22609e-31
NZ_CP022525.1\|WP_071533944.1\|1795523_1795739_-\|hypothetical-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	2.45371e-05
NZ_CP022525.1\|WP_094069662.1\|1796567_1808183_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|379124	pfam13332, Fil_haemagg_2, Haemagluttinin repeat.	7.76604e-41
NZ_CP022525.1\|WP_003097345.1\|1810691_1810907_-\|dodecin-family-protein	gnl\|CDD\|225896	COG3360, COG3360, Uncharacterized conserved protein [Function unknown].	6.39458e-35
NZ_CP022525.1\|WP_003111706.1\|1783162_1783849_-\|hypothetical-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	9.79924e-89
NZ_CP022525.1\|WP_003097347.1\|1810280_1810508_-\|DUF1161-domain-containing-protein	gnl\|CDD\|369019	pfam06649, DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function.	2.11491e-24

>NZ_CP022525.1|WP_003083536.1|1787555_1787951_-|hypothetical-protein
MPVLALRLTALAALAISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
>NZ_CP022525.1|WP_021263010.1|1785881_1787291_+|MgtC/SapB-family-protein
MRLHRGGEPDGYRRQRRPHGRRRTTVQAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL
>NZ_CP022525.1|WP_003111705.1|1784344_1785718_-|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T
MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSLIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVKEGQVGHDAGYLSTSRDPGVARSFAGQGTITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLSAKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA
>NZ_CP022525.1|WP_003111706.1|1783162_1783849_-|hypothetical-protein
MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ
>NZ_CP022525.1|WP_003083569.1|1782778_1783132_-|DUF4810-domain-containing-protein
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
>NZ_CP022525.1|WP_003083573.1|1782116_1782782_-|DUF799-domain-containing-protein
MKLARLSGLVAGFTLLALLGGCAPTKSVDYSAFKQAKPRSILVLPPLNESPDVKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD
>NZ_CP022525.1|WP_003083575.1|1781718_1782102_+|helix-turn-helix-transcriptional-regulator
MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETKGGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDLRLQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
>NZ_CP022525.1|WP_023100701.1|1779775_1781437_+|hypothetical-protein
MRYAPHASRYSLFTLAVSAALLPGAGWAANGDLAGARTPPSVACSWDREAALSYEERRLDTPLPFSGANVVTHDQTPLAERIVKGAGFDGFEPAFAKRLCTADGRTPVTSYAKALKLVTEEGRALWRAAVDRAQGRRAIPAGALPASDDRMLYWTRLYMTRTLRQWAPSFRLGKAQAQALQWRFERASRGQLDIDLPRRYAADGSRYRRMIISGFDVFTLGTPGTANTGLRNGNPSGATALALDGREFRLADGSLLRIEAYLLPVSYDPFNRGMQEDTLGPWFRPGPRRVDASITISQGGANQFWLEAWNGRFHGSSAGNDGIVYCPADSALPNYVLPLGSVTNRGTAPISLRGSGCNINPPRRWLGYDSASRWRQNLPAQFSKASLPVRQLLAADTWRGIERPPGATSQAAEGFDVTWHTNYDFFPDCANPRTENVPTNGVMNAMPDPSLVLPPNRRICARNGGGGDYLSNESAYRNTVLRDAFRLEIPAGHIHVPVMNNYYTGVPASGGGARNDNAISDARYEAYRSAIVAQTRALLVGVGNALAQGAQAD
>NZ_CP022525.1|WP_003083582.1|1779018_1779159_-|hypothetical-protein
MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP
>NZ_CP022525.1|WP_023100702.1|1776365_1778198_-|asparagine-synthase-(glutamine-hydrolyzing)
MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNALLGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRTRSDTEVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLLFGSEIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFREVQELLPGHLLSWRPNSQAKLRRYWEVRRQEHADDLQSTVQRTRELVTRALGSQLHADVPVCSLLSGGLDSTALTGIAQRIAKAEHGGDINSFSVDFVGQAEQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLIDNAELVCERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYGWFRDPQAVAAARFPWASRVRLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDSPEERRMREFSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVYNVPWSIKSRDGEEKWLLKRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDATNPVFGIVSREFLAAELEHPEGYFNTQVSRHNLETALALEGWLRLYGLSA
>NZ_CP022525.1|WP_153549618.1|1789683_1790673_-|hypothetical-protein
MADLDNALQKCKSQGNCRQVEEEFKARSDENRRRLNGCVAVGNCAEIRAEIDAGSTALNELVARQETANPAGSDSDIAYGFLMGRNVVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNPFGIGVPAMGGAAGKVTAKALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPVKLAAKATGTAGKIKIEAGAIPDANEVRAGQGLSGLGYDVTHQTTASAKGIQGQRTADLHVDGLGSIDVYTPKNLDPTKIVRAIEKKSNQAGGVLVQADLPSTDMSSIAARMWGKTNAQSIKTIFFQKPDGSLVRFDRPAGGG
>NZ_CP022525.1|WP_021263006.1|1790718_1791420_-|transposase
MPRQGRVVLPNYPLHVVQRGHNRQVVFAEDEDYQRYLSDLRDLKDAFGIKVYAFCLMTNHVHLLLAPGDSLSGLAQLMKTLAARTTRYRNRLEGRSGTLWESRYKSSVVQSDVYLLACCRYIELNPVRARMVDDVAAYPWSSYGLRADWLKEPNWLDMDPCFIELGQTAEERYRRYVTFMKEAIPAEELRLIREAVQRGQLTGNQRFVDEIERVAGVRIERRGQGRPRLEQGK
>NZ_CP022525.1|WP_019485604.1|1791650_1791968_-|hypothetical-protein
MSSQPTLEEWNFQVLMLIQALVGAISANFRMIALLWDGDEWVLRFYLEESNEEDVEEIEDVVCQYTAYQGSSLRCRSELIVGRERLPGLSEVGRVVYRRRESFDI
>NZ_CP022525.1|WP_071533944.1|1795523_1795739_-|hypothetical-protein
MAWLDEGLSRVNQIRRGAIECPDWSRDSWGVELRNGMARIYSLYDEDCSAAIALDDFERALLGWKRFIQAD
>NZ_CP022525.1|WP_124142585.1|1796166_1796571_-|hypothetical-protein
MIVLGGYLIAPGAKRTQFPVMSDPDEEEVLEALSKLRHSSGVLVLRVKPEPEIGAYEVALHAENGRFIVMLSQHAEEDGEHEVFTLRGAGEGNGFTYILGEAYPMAAVTENFGLICNCFKKFLLERKVSSDVWV
>NZ_CP022525.1|WP_094069662.1|1796567_1808183_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQAGNGVPIVNIATPNGAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNPNLKGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITRSAKLNAKLYAKNLNIVTGRNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVKLAGDMAASGGDIRIDASGKLSLAQASSQGDLKIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIALEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQGGSLKGATVRVDAGHLDNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVRAQALVNRGDGEVSGKRVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQLDNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKGDLQATLGSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLSLDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDNQGGRLLSDAGVTLKGASLDNSRSGVISAKGAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRVSAKGLLDANLKGLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNGAGGEISSDRAFTLAAASLDNRGGRLIGADSLTLRIAQALDNSLAGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASASLDNSGKGLLSGNAGLSVVTGALDNAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSAAGGEISARGDLRLTVERLVQRRGRLIGERGVSLDLRGGDLDNQGGLISARGPLSIERLNVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSGWQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALVSKGAQQIDAASLDNAQGIVSGESDVTLSIAGKLDNGQGGLVSAQRALSFERDDTLLNNAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVNTGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLASQADMSLRLVGGALRNQQDGLIFSQAGALEVQAGSLDNRQGTLQAQGDNRLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQSLEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSGGSLRALGRSGSTRLVAGDLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTFRQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSLRLDLSGGYRGNGRATSLGDFALNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAASLNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGLYTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARGGDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQVGDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADLTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGLAGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDDSKKRLGDGLYEQRLIRDAVVARTGQRYIDGLSSDEALFRYLMDNAIAYKDKLQLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWSTSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHSFATGKKVTAKNDRVEHQSTVVSAGGDLSVQGGNDVTFVASQAKASNEAYLYAGNDLNLLAAHDESYSYYAKKKKGSFGRSSSRMSESETSTVVSSSIQAGQGAELVAKRDVNVEASSASSMKGELTVVAGRDVNLTAAANSYSSASAKSKSGGLGLSSTSKANAQSSSYTSVQGATLSGDTTVVQARRDISVAASNVVSTGKTALRAGNDIIIDSVAETSESHRSESKNKSGLMSSGGIGITLGTAKNASTQDTRTVVNQGSTIGSVLGDVDMRAGKNLSITASDVVAGKDINLVGQNVSILAADNQNVSEQTRKTSKSGLTLALSGTVGSAIDATYQNAKQARNEDDSRLSALQGIKAGLSGVQAWQAAQQNGGMTGENSAQFVGISASLGSQKSSSRQRQEQQISQGSTLTAGGNLNIIATGSGAVGEDGDLRVQGSKLQAGKDLQLIANRDVVLEAAANTQKLDGKNKSSGGAVGVSVGVGSGEAGISIFANANKGAGKEIGNGTTWTETTLDAGQKASLVSGRDTTLKGAQVNGESILAKVGRDLTLQSLQDRDYYDSKQKNVGGGASLAIVGQGGGANLSLSQSKPHSKYDSVQEQTGLFAGKGGFQVEVGKHTQLDGSVIASTAEAEKNRLSTGSLGWSEIRNKAEYKSQLQSVSVSSANDGAGAFVSNMPSGMLIAYNHGDSASGTTGSAISEGTLEVRDPARQQQDVATLSRDPSRANDSVSPIFDKEKEQKRLQQVQLIGEIGTQAMDILRTQGQLDADKAARAELEARGISAPGAGASERQVEDYRKALLGTNAYQDIMGKYGTGGDYQKAAQAVTAALQGLAGGDIGSALAGASSPYVAGVIKQVAGDNDTARIMAHAVLGAVVAQAQGNSAAAGGAGAAGSELAAQVISERLYGTRDSATLNEAQKQTITALASLAGGLAGSVVDGSSGGAIAGAAGGKNATENNFLGGGTPPGLISYGQAASSLTEYMRKNGATAEEITQAQRDLAQGQGFDGVQPANEFIKAWGEAMVAEAAGLGIVAGLGRFGLWGAKGATPVVTAEGRIGNSVFTDVNQTARPAAQANPNQPTLIADRVDAKIAAKGTPHPNGNMADAHAEIGVIQKAFNEGKTVGSDMTMNVVGKDVCGYCRGDIAAAASKSGLKSLTIQAKDDITGLPKTYYWEVGMKSIREKKI
>NZ_CP022525.1|WP_073937341.1|1808295_1809984_-|two-partner-secretion-system-transporter-TpsB2
MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLDESARRQLLAPYQGRCLGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKPWQVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPHAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF
>NZ_CP022525.1|WP_003097347.1|1810280_1810508_-|DUF1161-domain-containing-protein
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
>NZ_CP022525.1|WP_003097345.1|1810691_1810907_-|dodecin-family-protein
MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS
>NZ_CP022525.1|WP_015502114.1|1811007_1811895_-|LysR-family-transcriptional-regulator
MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALHYGQGFEHLYYLLEAAVAGLGVAIAPEALVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG

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Crispr_ID: NZ_CP022525_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022525_3

1806243-1806386

Orphan

Consensus_repeat	Method
GACACCAGGCCGCCGCCGCGGTTGTCCAG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP022525_3

>merge|NZ_CP022525|3|1806243-1806386|PILER-CR
GCCGCCGTCGCGGTTGTCGAAGGCGCCTCCCGTGGCGCTCAGGCCGGCGTCGGCCACCAGCACGCCGCCACGGTTGTCCAGGCTGGCGCCGTGGACGTTCAACTCGCTGCGGCTCGACAGCAGGCCGCCGGCGCGGTTGTCCAG

>NZ_CP022525|3|1|1806243-1806386|PILER-CR
GCCGCCGTCGCGGTTGTCGAAGGCGCCTC	CCGTGGCGCTCAGGCCGGCGTCGGCCACCAGCAC
GCCGCCACGGTTGTCCAGGCTGGCGCCGT	GGACGTTCAACTCGCTGCGGCTCGACAGCAGGCC
GCCGGCGCGGTTGTCCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022525.1\|WP_021263006.1\|1790718_1791420_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP022525.1\|WP_003120671.1\|1813203_1814010_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP022525.1\|WP_124142585.1\|1796166_1796571_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_003083536.1\|1787555_1787951_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_003122286.1\|1815558_1816473_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|188320
NZ_CP022525.1\|WP_003111706.1\|1783162_1783849_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224379
NZ_CP022525.1\|WP_015502114.1\|1811007_1811895_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176171
NZ_CP022525.1\|WP_003111705.1\|1784344_1785718_-\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	unknown	unknown	gnl\|CDD\|227872
NZ_CP022525.1\|WP_003111192.1\|1814195_1814819_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP022525.1\|WP_019485604.1\|1791650_1791968_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022525.1\|WP_071533944.1\|1795523_1795739_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP022525.1\|WP_003097340.1\|1811998_1813207_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP022525.1\|WP_153549618.1\|1789683_1790673_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259835
NZ_CP022525.1\|WP_003097328.1\|1815170_1815548_-\|DOPA-4,5-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|378079
NZ_CP022525.1\|WP_073937341.1\|1808295_1809984_-\|two-partner-secretion-system-transporter-TpsB2	unknown	unknown	gnl\|CDD\|225387
NZ_CP022525.1\|WP_003097345.1\|1810691_1810907_-\|dodecin-family-protein	unknown	unknown	gnl\|CDD\|225896
NZ_CP022525.1\|WP_003097330.1\|1814826_1815192_+\|Hpt-domain-containing-protein	unknown	unknown	gnl\|CDD\|225108
NZ_CP022525.1\|WP_021263010.1\|1785881_1787291_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|225715
NZ_CP022525.1\|WP_003097347.1\|1810280_1810508_-\|DUF1161-domain-containing-protein	unknown	unknown	gnl\|CDD\|369019
NZ_CP022525.1\|WP_003114585.1\|1788049_1788328_-\|transposase	unknown	unknown	gnl\|CDD\|224854

Protein	Function_ID	Function_description	E-value
NZ_CP022525.1\|WP_021263006.1\|1790718_1791420_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.55167e-20
NZ_CP022525.1\|WP_003120671.1\|1813203_1814010_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	3.87689e-144
NZ_CP022525.1\|WP_003111192.1\|1814195_1814819_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.04424e-66
NZ_CP022525.1\|WP_003122286.1\|1815558_1816473_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|188320	TIGR03418, chol_sulf_TF, putative choline sulfate-utilization transcription factor. Members of this protein family are transcription factors of the LysR family. Their genes typically are divergently transcribed from choline-sulfatase genes. That enzyme makes choline, a precursor to the osmoprotectant glycine-betaine, available by hydrolysis of choline sulfate.	8.66735e-163
NZ_CP022525.1\|WP_021263010.1\|1785881_1787291_+\|MgtC/SapB-family-protein	gnl\|CDD\|225715	COG3174, COG3174, Predicted membrane protein [Function unknown].	1.50517e-97
NZ_CP022525.1\|WP_015502114.1\|1811007_1811895_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176171	cd08482, PBP2_TrpI, The C-terminal substrate binding domain of LysR-type transcriptional regulator TrpI, which is involved in control of tryptophan synthesis, contains type 2 periplasmic binding fold. TrpI and indoleglycerol phosphate (InGP), are required to activate transcription of the trpBA, the genes for tryptophan synthase. The trpBA is induced by the InGp substrate, rather than by tryptophan, but the exact mechanism of the activation event is not known. This substrate-binding domain of TrpI shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.45181e-98
NZ_CP022525.1\|WP_003111705.1\|1784344_1785718_-\|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T	gnl\|CDD\|227872	COG5585, COG5585, NAD+--asparagine ADP-ribosyltransferase [Signal transduction mechanisms].	7.71685e-56
NZ_CP022525.1\|WP_153549618.1\|1789683_1790673_-\|hypothetical-protein	gnl\|CDD\|259835	cd13442, CDI_toxin_Bp1026b_like, Mg-dependent tRNAse of the contact-dependent growth inhibition (CDI) system of Burkholderia pseudomallei 1026b, and related proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring cells. This model represents the C-terminal toxin domain of CdiA effector proteins. CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered. A wide variety of C-terminal toxin domains appear to exist; this particular example from Burkholderia pseudomallei 1026b and other bacteria appears to function as a Mg2+-dependent RNAse cleaving tRNA, most likely in the aminoacyl acceptor stem.	1.22609e-31
NZ_CP022525.1\|WP_071533944.1\|1795523_1795739_-\|hypothetical-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	2.45371e-05
NZ_CP022525.1\|WP_003097340.1\|1811998_1813207_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP022525.1\|WP_003097328.1\|1815170_1815548_-\|DOPA-4,5-dioxygenase-family-protein	gnl\|CDD\|378079	pfam08883, DOPA_dioxygen, Dopa 4,5-dioxygenase family. This family of proteins are related to a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore.	6.00376e-51
NZ_CP022525.1\|WP_073937341.1\|1808295_1809984_-\|two-partner-secretion-system-transporter-TpsB2	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.4072e-162
NZ_CP022525.1\|WP_003097345.1\|1810691_1810907_-\|dodecin-family-protein	gnl\|CDD\|225896	COG3360, COG3360, Uncharacterized conserved protein [Function unknown].	6.39458e-35
NZ_CP022525.1\|WP_003097330.1\|1814826_1815192_+\|Hpt-domain-containing-protein	gnl\|CDD\|225108	COG2198, ArcB, FOG: HPt domain [Signal transduction mechanisms].	2.58626e-16
NZ_CP022525.1\|WP_003111706.1\|1783162_1783849_-\|hypothetical-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	9.79924e-89
NZ_CP022525.1\|WP_003097347.1\|1810280_1810508_-\|DUF1161-domain-containing-protein	gnl\|CDD\|369019	pfam06649, DUF1161, Protein of unknown function (DUF1161). This family consists of several short, hypothetical bacterial proteins of unknown function.	2.11491e-24
NZ_CP022525.1\|WP_003114585.1\|1788049_1788328_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.78802e-08

>NZ_CP022525.1|WP_124142585.1|1796166_1796571_-|hypothetical-protein
MIVLGGYLIAPGAKRTQFPVMSDPDEEEVLEALSKLRHSSGVLVLRVKPEPEIGAYEVALHAENGRFIVMLSQHAEEDGEHEVFTLRGAGEGNGFTYILGEAYPMAAVTENFGLICNCFKKFLLERKVSSDVWV
>NZ_CP022525.1|WP_071533944.1|1795523_1795739_-|hypothetical-protein
MAWLDEGLSRVNQIRRGAIECPDWSRDSWGVELRNGMARIYSLYDEDCSAAIALDDFERALLGWKRFIQAD
>NZ_CP022525.1|WP_019485604.1|1791650_1791968_-|hypothetical-protein
MSSQPTLEEWNFQVLMLIQALVGAISANFRMIALLWDGDEWVLRFYLEESNEEDVEEIEDVVCQYTAYQGSSLRCRSELIVGRERLPGLSEVGRVVYRRRESFDI
>NZ_CP022525.1|WP_021263006.1|1790718_1791420_-|transposase
MPRQGRVVLPNYPLHVVQRGHNRQVVFAEDEDYQRYLSDLRDLKDAFGIKVYAFCLMTNHVHLLLAPGDSLSGLAQLMKTLAARTTRYRNRLEGRSGTLWESRYKSSVVQSDVYLLACCRYIELNPVRARMVDDVAAYPWSSYGLRADWLKEPNWLDMDPCFIELGQTAEERYRRYVTFMKEAIPAEELRLIREAVQRGQLTGNQRFVDEIERVAGVRIERRGQGRPRLEQGK
>NZ_CP022525.1|WP_153549618.1|1789683_1790673_-|hypothetical-protein
MADLDNALQKCKSQGNCRQVEEEFKARSDENRRRLNGCVAVGNCAEIRAEIDAGSTALNELVARQETANPAGSDSDIAYGFLMGRNVVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNPFGIGVPAMGGAAGKVTAKALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPVKLAAKATGTAGKIKIEAGAIPDANEVRAGQGLSGLGYDVTHQTTASAKGIQGQRTADLHVDGLGSIDVYTPKNLDPTKIVRAIEKKSNQAGGVLVQADLPSTDMSSIAARMWGKTNAQSIKTIFFQKPDGSLVRFDRPAGGG
>NZ_CP022525.1|WP_003114585.1|1788049_1788328_-|transposase
MPRQGRVVLPNYPLHVVQRGHNRQVVFAEDEDYQRYLSDPQDLEDAFDNKLHAFCRMATHIHLLLAACRPSFLLPRPTAPQCTSTPETAVSR
>NZ_CP022525.1|WP_003083536.1|1787555_1787951_-|hypothetical-protein
MPVLALRLTALAALAISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR
>NZ_CP022525.1|WP_021263010.1|1785881_1787291_+|MgtC/SapB-family-protein
MRLHRGGEPDGYRRQRRPHGRRRTTVQAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL
>NZ_CP022525.1|WP_003111705.1|1784344_1785718_-|T3SS-effector-bifunctional-cytotoxin-exoenzyme-T
MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSLIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGRELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRDAFEAVKEGQVGHDAGYLSTSRDPGVARSFAGQGTITTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLSAKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA
>NZ_CP022525.1|WP_003111706.1|1783162_1783849_-|hypothetical-protein
MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ
>NZ_CP022525.1|WP_073937341.1|1808295_1809984_-|two-partner-secretion-system-transporter-TpsB2
MALHRLAFIFLCLPLMASAAPFTSPGDRDLIRDRQQRLLDEQRKRLEELQQLPGKGAPAAADASGDDERCFEIRRIELEGAGHLDESARRQLLAPYQGRCLGVGQLNALLKAVTDHYLDRGYVTTRAYLPQQDLASGTLRIIVVEGRLEGLDSSALASPRELAMSFPGRTGELLDLRELEQLVDQLSRLPSRQAQLELVPGSEVGGSRVRLKGERDKPWQVSATRNNDGDVSTGEQQMGLGLDWDSPLGLADQLNLRANRDAVTDRWRHSDSQSLFYSLPWGWWTFTYGYSQSDYRTRNEASGFPFKLDGDSRSHQFRAERVLHRDGVSKTAMSLGLSHQRTNNYVEDTRLEDQSTRITETQLGFNHGRRIGSGFVNLDLGWQQGIGALGAQGRGHPHAGDPNARYDKYSLTLSYLQPFQLWGERFSFDSLATGQRSEDVLFSPQRISLGGNSSVRGFKDQTLTGDSGGYWRNQLRWRRAVEWAPLRPWLQEYGVAFAYDVGVIRHDRYNDGASGRMSGNAIELDARGRYFAASVGFARSLERPSAIERREHPIYFRVDAFF
>NZ_CP022525.1|WP_003097347.1|1810280_1810508_-|DUF1161-domain-containing-protein
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
>NZ_CP022525.1|WP_003097345.1|1810691_1810907_-|dodecin-family-protein
MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS
>NZ_CP022525.1|WP_015502114.1|1811007_1811895_-|LysR-family-transcriptional-regulator
MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALHYGQGFEHLYYLLEAAVAGLGVAIAPEALVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG
>NZ_CP022525.1|WP_003097340.1|1811998_1813207_+|tryptophan-synthase-subunit-beta
MTSYRNGPDAKGLFGRFGGQYVAETLMPLILDLAREYEKAKDDPAFQEELAYFQRDYVGRPSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEALRDWVTNVDSTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLAEKEGRLPDSLVACIGGGSNAMGLFHPFLDDAGVQIVGVEAAGHGIDTGKHAASLNGGVPGVLHGNRTFLLQDADGQIIDAHSISAGLDYPGIGPEHAWLHDTGRVEYTSITDDEALEAFHTCCRLEGIIPALESSHALAEVFKRAPSLPKEHIMVVNLSGRGDKDMQTVMHHMQQESKA
>NZ_CP022525.1|WP_003120671.1|1813203_1814010_+|tryptophan-synthase-subunit-alpha
MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALEGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGLDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR
>NZ_CP022525.1|WP_003111192.1|1814195_1814819_+|response-regulator-transcription-factor
MSKVLIVDDHPAIRLAVRLLFERDGFTIVGEADNGAEALQVARKKSPDLAILDIGIPKIDGLEVIARLKSLKLDTKVLVLTRQNPAQFAPRCLQAGAMGFVSKRENLSELLLAAKAVLAGYIHFPTGALRSINQQSRDNEARMLESLSDREMTVLQYLANGNTNKAIAQQLFLSEKTVSTYKSRIMLKLNAHSLAGLIDFARRHELI
>NZ_CP022525.1|WP_003097330.1|1814826_1815192_+|Hpt-domain-containing-protein
MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQEREQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS
>NZ_CP022525.1|WP_003097328.1|1815170_1815548_-|DOPA-4,5-dioxygenase-family-protein
MNEYSTPRIQGFHAHVYFDAQSIERARALCEEAARRFPLKMGRIHERPVGPHPDWSCQLAFAPEVFGELVPWLAIHRQDLVVFIHPVTGNDLLDHRDRAIWMGAIRPLDLSILDEGPQRYDFAVP
>NZ_CP022525.1|WP_003122286.1|1815558_1816473_-|LysR-family-transcriptional-regulator
MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAIDRQPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	52141-52174	9	0.735
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	NZ_CP025188	Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence	145494-145527	9	0.735
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1621724-1621757	10	0.706
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1396885-1396918	10	0.706
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1050121-1050154	10	0.706
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1645606-1645639	10	0.706
NZ_CP022525_3	3.1\|1806272\|34\|NZ_CP022525\|PILER-CR	1806272-1806305	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1117586-1117619	10	0.706

1. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
tcatgcggctcccgtgacgctcaggccggtcatg	Protospacer
  * *** ********.************.  .*

2. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 9, identity: 0.735

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
gtcgaccaggcccgtggccctcagcccggcgtcg	Protospacer
*  *.*    ******** ***** *********

3. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
gcccaggcctccggtggcgcgcaggccggcctgt	Protospacer
*   . ****** ******* ********* *

4. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
gcccaggcctccggtggcgcgcaggccggcctgt	Protospacer
*   . ****** ******* ********* *

5. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
gcccaggcctccggtggcgcgcaggccggcctgt	Protospacer
*   . ****** ******* ********* *

6. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
gcccaggcctccggtggcgcgcaggccggcctgt	Protospacer
*   . ****** ******* ********* *

7. spacer 3.1|1806272|34|NZ_CP022525|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.706

gaaggcgcctcccgtggcgctcaggccggcgtcg	CRISPR spacer
gcccaggcctccggtggcgcgcaggccggcctgt	Protospacer
*   . ****** ******* ********* *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

293415 : 401342

112

uncultured_Caudovirales_phage(25.53%)

tail,tRNA,plate,terminase,lysis,capsid,head,portal

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003092163.1\|293415_293886_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_003092166.1\|294150_294990_+	aquaporin	M1HWZ0	Paramecium_bursaria_Chlorella_virus	5.2e-16	30.4
WP_003092168.1\|295029_296547_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_003092173.1\|296752_297508_+	DeoR/GlpR family transcriptional regulator	A0A077SK06	Escherichia_phage	1.6e-24	30.7
WP_003098460.1\|297786_299325_+	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003119370.1\|299457_299787_+	GlpM family protein	NA	NA	NA	NA
WP_003092179.1\|299803_300790_-	alpha/beta hydrolase	A0A249XTE1	Mycobacterium_phage	3.0e-07	29.3
WP_003109716.1\|301088_302009_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023100870.1\|302014_303265_-	OprD family porin	NA	NA	NA	NA
WP_023100869.1\|303317_304523_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_023100868.1\|304545_306078_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_021265152.1\|306074_306872_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_023092583.1\|306931_308119_-	CoA transferase	NA	NA	NA	NA
WP_094069632.1\|308157_309885_-	DNA alkylation response protein	NA	NA	NA	NA
WP_021265153.1\|309998_310886_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003109708.1\|311104_312514_+	MHS family MFS transporter	NA	NA	NA	NA
WP_003119362.1\|312510_313584_-	bifunctional transcriptional activator/DNA repair protein Ada	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	3.9e-16	45.6
WP_003138044.1\|313673_314996_-	APC family permease	NA	NA	NA	NA
WP_003092205.1\|315195_316011_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_003092207.1\|316138_316924_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003092209.1\|316951_317104_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_003092213.1\|317103_317367_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003092223.1\|317610_319221_+	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
WP_003092226.1\|319290_319662_-	diacylglycerol kinase	NA	NA	NA	NA
WP_003092229.1\|319733_320387_-	response regulator transcription factor	NA	NA	NA	NA
WP_021265155.1\|320519_321446_+	DMT family transporter	NA	NA	NA	NA
WP_021265156.1\|321449_322166_-	DTW domain-containing protein	NA	NA	NA	NA
WP_073658164.1\|322408_323515_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-30	33.6
WP_003092241.1\|323519_324413_+	ABC transporter permease	NA	NA	NA	NA
WP_003092244.1\|324405_325176_+	ABC transporter permease	NA	NA	NA	NA
WP_017002184.1\|325264_326329_+	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003092248.1\|326504_326915_+	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA
WP_003092249.1\|326933_327155_+	DUF3820 family protein	NA	NA	NA	NA
WP_021265157.1\|327278_329684_-	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase	NA	NA	NA	NA
WP_003098484.1\|329863_331267_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003092255.1\|331349_332420_+	LOG family protein	NA	NA	NA	NA
WP_003109699.1\|332441_332903_-	recombination regulator RecX	NA	NA	NA	NA
WP_003092260.1\|332908_333949_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5
WP_003092262.1\|334082_334589_-	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_021265158.1\|334736_335744_+	TolB family protein	NA	NA	NA	NA
WP_015649036.1\|336843_337530_+	hypothetical protein	A0A2K8I970	Pseudomonas_phage	1.9e-117	86.0
WP_015649037.1\|337511_337775_-	hypothetical protein	B5WZU6	Pseudomonas_phage	1.3e-42	92.0
WP_011805433.1\|338405_339827_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_015649038.1\|340362_340860_+	hypothetical protein	NA	NA	NA	NA
WP_079391887.1\|341186_341768_-\|lysis	lysis protein	NA	NA	NA	NA
WP_062832760.1\|341737_342367_-	glycoside hydrolase family 19 protein	J7I4M6	Pseudomonas_phage	2.4e-74	68.9
WP_014603877.1\|342478_342664_+	hypothetical protein	NA	NA	NA	NA
WP_015649041.1\|342701_343754_-\|tail	tail formation pyocin	A0A2H4JBF6	uncultured_Caudovirales_phage	1.3e-133	70.3
WP_015649042.1\|343768_343975_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	9.6e-17	62.7
WP_062832759.1\|343949_344789_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.3e-80	53.9
WP_015649044.1\|344797_347488_-\|tail	tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.8e-41	29.1
WP_014603883.1\|347626_347923_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_015649045.1\|347932_348442_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.4e-88	100.0
WP_015649046.1\|348454_349615_-\|tail	phage tail sheath family protein	Q38068	Phage_PS17	4.4e-215	97.7
WP_015649047.1\|349658_350120_-	hypothetical protein	Q9ZXK5	Pseudomonas_virus	1.5e-17	38.9
WP_015649048.1\|350116_352198_-\|tail	tail fiber	Q9ZXK6	Pseudomonas_virus	4.7e-111	38.6
WP_062832756.1\|352194_352725_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	4.1e-51	57.4
WP_014603889.1\|352721_353606_-\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	7.4e-114	73.6
WP_014603890.1\|353602_353929_-	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	2.3e-33	65.7
WP_014603891.1\|353938_354160_-	hypothetical protein	NA	NA	NA	NA
WP_014603892.1\|354217_354775_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	3.4e-48	67.0
WP_015649050.1\|354771_355308_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	7.8e-34	44.5
WP_015649051.1\|355300_355969_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	8.2e-65	58.8
WP_015649052.1\|355968_356283_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	2.1e-18	45.8
WP_043501284.1\|356285_356471_-	hypothetical protein	NA	NA	NA	NA
WP_015649053.1\|356472_357510_-\|capsid	major capsid protein	A0A0C5ABI0	Bacteriophage	1.7e-69	40.5
WP_014603897.1\|357525_357876_-\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	2.5e-12	42.2
WP_015649054.1\|357889_359110_-	S49 family peptidase	A0A219YAK4	Aeromonas_phage	7.0e-46	34.6
WP_031757828.1\|359112_360726_-\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	9.4e-91	39.6
WP_014603900.1\|360728_360944_-	hypothetical protein	NA	NA	NA	NA
WP_052168395.1\|360956_362843_-\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	4.5e-161	49.7
WP_015649057.1\|362886_363411_-\|terminase	phage DNA packaging protein, Nu1 subunit of terminase	A0A2D1GMW4	Marinobacter_phage	1.2e-18	37.2
WP_014603903.1\|363527_363890_-	hypothetical protein	NA	NA	NA	NA
WP_011805433.1\|364039_365461_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_019396873.1\|366382_366754_-	hypothetical protein	NA	NA	NA	NA
WP_094069682.1\|366750_368964_-	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	8.7e-188	46.8
WP_023107143.1\|368960_369170_-	hypothetical protein	NA	NA	NA	NA
WP_019726483.1\|369162_369717_-	hypothetical protein	NA	NA	NA	NA
WP_019726484.1\|370033_370288_-	hypothetical protein	A0A2H4JA29	uncultured_Caudovirales_phage	1.5e-06	45.6
WP_094069681.1\|370394_371108_+	helix-turn-helix domain-containing protein	F1C599	Cronobacter_phage	1.8e-22	34.4
WP_031691633.1\|371390_371702_+	hypothetical protein	NA	NA	NA	NA
WP_019727252.1\|371711_372005_+	DNA-binding protein	NA	NA	NA	NA
WP_031631574.1\|372158_372467_+	hypothetical protein	NA	NA	NA	NA
WP_031691635.1\|372463_372781_+	transcriptional regulator	NA	NA	NA	NA
WP_062832749.1\|372831_373458_+	hypothetical protein	NA	NA	NA	NA
WP_019726491.1\|373454_373694_+	hypothetical protein	NA	NA	NA	NA
WP_153995490.1\|373702_374263_+	hypothetical protein	A0A2I7S6F6	Vibrio_phage	5.7e-11	56.2
WP_043503416.1\|374259_374742_+	hypothetical protein	NA	NA	NA	NA
WP_094069680.1\|374738_376574_+	DNA cytosine methyltransferase	A0A1I9KFW0	Aeromonas_phage	9.0e-98	38.3
WP_094069679.1\|377059_377272_+	excisionase	NA	NA	NA	NA
WP_062832747.1\|377238_378477_+	DUF3596 domain-containing protein	A0A1I9KF78	Aeromonas_phage	6.6e-68	39.8
WP_062832746.1\|378883_379672_-	hypothetical protein	NA	NA	NA	NA
WP_094069742.1\|379956_382524_+	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.4e-24	22.1
WP_003092272.1\|382590_382914_+	ferredoxin family protein	NA	NA	NA	NA
WP_011805433.1\|383041_384463_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_003113871.1\|385263_386268_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_021265159.1\|386372_387266_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003098558.1\|387311_387947_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_003092341.1\|387979_388729_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	6.8e-68	53.0
WP_023100864.1\|388716_389784_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_003092346.1\|389780_390254_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_003163269.1\|390324_391176_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_003092351.1\|391229_392342_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.3e-35	29.1
WP_003092354.1\|392473_393382_+	glutathione-dependent formaldehyde neutralization regulator	NA	NA	NA	NA
WP_003092355.1\|393457_394684_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_003092358.1\|394649_394898_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_003092359.1\|394958_395663_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_003098569.1\|395682_395967_-	cell division protein FtsB	NA	NA	NA	NA
WP_003092364.1\|396031_397321_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.5e-139	61.5
WP_021265161.1\|397366_398212_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.3e-48	39.9
WP_003092366.1\|398214_399843_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.0e-158	53.1
WP_044727069.1\|400013_401342_-\|tRNA	tRNA lysidine(34) synthetase TilS	M1IB95	Acanthocystis_turfacea_Chlorella_virus	7.7e-06	24.1

DBSCAN-SWA_2

1153070 : 1188253

uncultured_Caudovirales_phage(27.27%)

tRNA,tail,holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003113167.1\|1153070_1154270_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_073656511.1\|1154554_1155898_+	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	3.0e-18	44.1
WP_004355127.1\|1155900_1156992_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_003085254.1\|1157045_1157396_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.0e-26	53.2
WP_003120826.1\|1157473_1157896_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_003085249.1\|1157896_1158616_-	hypothetical protein	NA	NA	NA	NA
WP_003101649.1\|1158615_1159650_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_003085245.1\|1159940_1160363_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_003085244.1\|1160379_1161348_+	nitronate monooxygenase	NA	NA	NA	NA
WP_003085240.1\|1161469_1162552_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003085237.1\|1162612_1163413_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004355118.1\|1163452_1164934_-	AAA family ATPase	U5XJW0	Phormidium_phage	6.7e-67	33.8
WP_003085225.1\|1165012_1165351_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003085224.1\|1165450_1166098_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003085223.1\|1166152_1166947_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_003085219.1\|1167266_1167689_-	OsmC family protein	NA	NA	NA	NA
WP_021263052.1\|1167961_1168606_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_021263053.1\|1168667_1169504_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.6e-70	56.9
WP_003085203.1\|1169500_1170550_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003117978.1\|1170551_1171157_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003118919.1\|1171504_1171762_-	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_023100785.1\|1171758_1172121_-	hypothetical protein	H2BDA0	Pseudomonas_phage	7.1e-15	47.1
WP_023100784.1\|1172117_1172747_-	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	7.1e-87	78.5
WP_021263054.1\|1172779_1173769_-	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.7e-106	55.5
WP_003101635.1\|1173826_1174033_-	hypothetical protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_094069670.1\|1174007_1174880_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-75	51.7
WP_023100783.1\|1174889_1177127_-\|tail	phage tail length determinator protein	NA	NA	NA	NA
WP_094069669.1\|1177296_1177641_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_003085175.1\|1177655_1178159_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003109051.1\|1178171_1179332_-\|tail	phage tail sheath family protein	Q38068	Phage_PS17	2.7e-188	83.4
WP_003085172.1\|1179374_1179815_-	hypothetical protein	NA	NA	NA	NA
WP_015502281.1\|1179823_1181932_-\|tail	tail fiber	Q9ZXK6	Pseudomonas_virus	6.5e-225	52.3
WP_003137385.1\|1181933_1182467_-\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	5.2e-62	64.6
WP_003085151.1\|1182459_1183347_-	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_003085143.1\|1183343_1183670_-	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003121844.1\|1183822_1184380_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	6.0e-45	70.3
WP_021263056.1\|1184376_1184892_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	6.3e-33	43.4
WP_094069668.1\|1184913_1185339_-\|holin	holin	B5TK61	Pseudomonas_phage	4.7e-26	53.3
WP_011805433.1\|1185392_1186814_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_003085135.1\|1187645_1188005_-	hypothetical protein	NA	NA	NA	NA
WP_003085132.1\|1188052_1188253_-	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3

DBSCAN-SWA_3

1736957 : 1791420

Moumouvirus(20.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003104969.1\|1736957_1738004_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_003083676.1\|1737967_1739827_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003111625.1\|1739823_1740333_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_073665600.1\|1740334_1741180_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003083670.1\|1741347_1741836_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003104973.1\|1741911_1743408_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003083666.1\|1743420_1743939_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_023100711.1\|1744027_1745062_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_023098299.1\|1745429_1746953_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_003083660.1\|1746997_1747462_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_003115052.1\|1747477_1748812_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_014603461.1\|1748818_1750168_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_094069663.1\|1750164_1753698_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_003083642.1\|1753694_1754375_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_003083639.1\|1754384_1755113_+	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_023100709.1\|1755120_1758219_+	protein kinase	M1PCM5	Moumouvirus	2.5e-23	27.8
WP_023100708.1\|1758215_1758935_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-19	36.8
WP_003128189.1\|1758934_1760134_+	ABC transporter permease	NA	NA	NA	NA
WP_023100707.1\|1760126_1761839_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_003083630.1\|1761900_1762815_+	hypothetical protein	NA	NA	NA	NA
WP_023100706.1\|1763045_1764104_-	PA0069 family radical SAM protein	NA	NA	NA	NA
WP_003083624.1\|1764192_1764468_-	YheV family putative metal-binding protein	NA	NA	NA	NA
WP_003083621.1\|1764464_1766510_-	oligopeptidase A	A0A1V0SD92	Indivirus	4.6e-34	21.3
WP_003083618.1\|1766587_1767130_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_021263017.1\|1767122_1767788_+	HAD family hydrolase	NA	NA	NA	NA
WP_023100705.1\|1767820_1768804_+	hypothetical protein	NA	NA	NA	NA
WP_003118564.1\|1768811_1769939_-	hypothetical protein	NA	NA	NA	NA
WP_003083614.1\|1770030_1770447_+	hypothetical protein	NA	NA	NA	NA
WP_003083612.1\|1770503_1770941_+	hypothetical protein	NA	NA	NA	NA
WP_003114662.1\|1770952_1771186_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_021263016.1\|1771296_1771752_-	OsmC family protein	NA	NA	NA	NA
WP_009314899.1\|1771835_1772540_-	DsbA family protein	NA	NA	NA	NA
WP_003083599.1\|1772602_1773490_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003083596.1\|1773597_1774518_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_021263013.1\|1774583_1775090_+	DUF1993 family protein	NA	NA	NA	NA
WP_023100703.1\|1775128_1775677_+	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	6.1e-34	41.6
WP_003083588.1\|1775884_1776313_+	cupin domain-containing protein	NA	NA	NA	NA
WP_023100702.1\|1776365_1778198_-	asparagine synthase (glutamine-hydrolyzing)	A0A2K9R7N5	Dishui_lake_phycodnavirus	2.7e-17	28.3
WP_003083582.1\|1779018_1779159_-	hypothetical protein	NA	NA	NA	NA
WP_023100701.1\|1779775_1781437_+	hypothetical protein	NA	NA	NA	NA
WP_003083575.1\|1781718_1782102_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003083573.1\|1782116_1782782_-	DUF799 domain-containing protein	NA	NA	NA	NA
WP_003083569.1\|1782778_1783132_-	DUF4810 domain-containing protein	NA	NA	NA	NA
WP_003111706.1\|1783162_1783849_-	hypothetical protein	NA	NA	NA	NA
WP_003111705.1\|1784344_1785718_-	T3SS effector bifunctional cytotoxin exoenzyme T	NA	NA	NA	NA
WP_021263010.1\|1785881_1787291_+	MgtC/SapB family protein	NA	NA	NA	NA
WP_003083536.1\|1787555_1787951_-	hypothetical protein	NA	NA	NA	NA
WP_003114585.1\|1788049_1788328_-\|transposase	transposase	NA	NA	NA	NA
WP_153549618.1\|1789683_1790673_-	hypothetical protein	NA	NA	NA	NA
WP_021263006.1\|1790718_1791420_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

2935916 : 2977186

Pseudomonas_phage(50.0%)

tRNA,transposase,integrase,coat

attL 2927232:2927248|attR 2959981:2959997

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2927232:2927248	attL	NA	NA	NA	NA
WP_094069644.1\|2935916_2937005_+	ImmA/IrrE family metallo-endopeptidase	A0A075BTZ7	Microcystis_phage	3.9e-08	37.0
WP_124142479.1\|2937005_2937941_-	hypothetical protein	NA	NA	NA	NA
WP_094069643.1\|2937940_2938738_-	hypothetical protein	NA	NA	NA	NA
WP_094069642.1\|2938738_2939626_-	thymidylate synthase	A0A218MKK4	uncultured_virus	2.5e-21	33.3
WP_004577240.1\|2939571_2940534_-\|transposase	IS30-like element ISPpu17 family transposase	W5R8L2	Staphylococcus_phage	9.7e-43	37.7
WP_058128192.1\|2940851_2941160_-	DUF4031 domain-containing protein	A0A0M7QF68	Escherichia_phage	6.5e-09	42.0
WP_003115921.1\|2941650_2941923_+	hypothetical protein	NA	NA	NA	NA
WP_034028223.1\|2942134_2942422_+	DUF5447 family protein	Q56VP7	Pseudomonas_phage	2.4e-50	91.6
WP_003133746.1\|2942429_2943074_+	DNA cytosine methyltransferase	E3SMD8	Cyanophage	4.3e-63	64.4
WP_094069641.1\|2943077_2943455_+	hypothetical protein	Q56VP6	Pseudomonas_phage	1.2e-60	97.6
WP_031635504.1\|2943589_2944024_+	hypothetical protein	Q56VP5	Pseudomonas_phage	7.9e-61	97.9
WP_033981266.1\|2944040_2944133_+	hypothetical protein	Q56VP4	Pseudomonas_phage	6.1e-08	96.7
WP_003115979.1\|2944145_2944397_+	hypothetical protein	NA	NA	NA	NA
WP_003125072.1\|2944409_2944658_+\|coat	phage coat protein B	Q56VP2	Pseudomonas_phage	2.0e-32	92.7
WP_094069640.1\|2944793_2946062_+	attachment protein	Q56VP1	Pseudomonas_phage	4.1e-57	57.2
WP_003114150.1\|2946066_2946423_+	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	7.9e-59	100.0
WP_094069639.1\|2946426_2947701_+	hypothetical protein	Q56VN9	Pseudomonas_phage	1.8e-198	86.8
WP_004352686.1\|2947930_2949223_+	hypothetical protein	Q56VN8	Pseudomonas_phage	1.8e-241	92.3
WP_016253914.1\|2949219_2950221_+\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	3.4e-75	46.8
WP_070341487.1\|2950201_2950612_-	hypothetical protein	NA	NA	NA	NA
WP_003099270.1\|2951006_2952107_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_003099278.1\|2952147_2952732_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003095013.1\|2952772_2953387_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_003099281.1\|2953503_2954445_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	4.1e-46	35.4
WP_009878189.1\|2954611_2955460_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_003095005.1\|2955461_2956079_-	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_003135130.1\|2956083_2957856_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_023101596.1\|2957999_2959268_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_003094997.1\|2959285_2960368_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	4.3e-07	48.3
2959981:2959997	attR	NA	NA	NA	NA
WP_003114694.1\|2960369_2961200_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003135128.1\|2961193_2961952_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_003099300.1\|2961941_2962739_+	glutamate racemase	NA	NA	NA	NA
WP_003099307.1\|2962872_2963394_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	1.4e-59	69.8
WP_021264087.1\|2963519_2964965_-	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	1.1e-45	28.0
WP_003141623.1\|2964961_2965861_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	8.5e-17	39.1
WP_021264088.1\|2965870_2966827_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_003094987.1\|2966979_2967963_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003114699.1\|2968376_2969294_+	TIGR01777 family protein	NA	NA	NA	NA
WP_021264089.1\|2969290_2970313_+	ferrochelatase	NA	NA	NA	NA
WP_003099328.1\|2970592_2971966_+	MFS transporter	NA	NA	NA	NA
WP_003099330.1\|2971967_2972915_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_021264091.1\|2972911_2975287_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_021264092.1\|2975303_2976092_-	molecular chaperone	NA	NA	NA	NA
WP_021264093.1\|2976110_2976653_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_003135089.1\|2976652_2977186_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_5

3552235 : 3559208

Pseudomonas_phage(100.0%)

integrase

attL 3548392:3548409|attR 3560153:3560170

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3548392:3548409	attL	NA	NA	NA	NA
WP_057391439.1\|3552235_3552613_+	hypothetical protein	Q56VP6	Pseudomonas_phage	1.2e-60	96.8
WP_003140508.1\|3552747_3553182_+	hypothetical protein	Q56VP5	Pseudomonas_phage	3.8e-63	100.0
WP_003115130.1\|3553198_3553291_+	hypothetical protein	Q56VP4	Pseudomonas_phage	7.3e-09	100.0
WP_003124954.1\|3553302_3553554_+	hypothetical protein	NA	NA	NA	NA
WP_003124953.1\|3553567_3553786_+	hypothetical protein	NA	NA	NA	NA
WP_033953308.1\|3554102_3555050_+	hypothetical protein	NA	NA	NA	NA
WP_003133726.1\|3555059_3555410_+	DUF2523 domain-containing protein	Q56VP0	Pseudomonas_phage	1.6e-19	40.2
WP_033953311.1\|3555411_3556674_+	hypothetical protein	Q56VN9	Pseudomonas_phage	1.6e-117	57.2
WP_003123045.1\|3556932_3558225_+	hypothetical protein	Q56VN8	Pseudomonas_phage	4.8e-247	94.0
WP_034014422.1\|3558224_3559208_+\|integrase	tyrosine-type recombinase/integrase	Q56VN7	Pseudomonas_phage	2.1e-93	52.3
3560153:3560170	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3745739 : 3795445

Pseudomonas_phage(88.14%)

tail,holin,terminase,protease,lysis,transposase,portal,integrase

attL 3751634:3751662|attR 3792329:3792357

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087920907.1\|3745739_3746902_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	9.5e-85	53.2
WP_003111823.1\|3747452_3748541_-	DUF3396 domain-containing protein	A4JWV3	Burkholderia_virus	9.0e-37	34.7
WP_003111822.1\|3748557_3749259_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	1.7e-49	50.5
WP_021264316.1\|3749255_3749774_-	hypothetical protein	NA	NA	NA	NA
WP_023101493.1\|3749947_3750283_-	TM2 domain-containing protein	A0A240F358	Aeromonas_phage	5.6e-06	41.7
WP_003109444.1\|3750525_3751164_-	hypothetical protein	NA	NA	NA	NA
3751634:3751662	attL	NA	NA	NA	NA
WP_014603615.1\|3752147_3752591_-	SocA family protein	I6R0L8	Salmonella_phage	4.3e-46	56.8
WP_023083766.1\|3752657_3753836_-\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	8.7e-211	96.3
WP_025991893.1\|3753978_3754308_-	hypothetical protein	A0A1W6JT94	Pseudomonas_phage	2.4e-57	97.2
WP_019486526.1\|3754300_3755020_-	hypothetical protein	A0A1W6JTE0	Pseudomonas_phage	1.9e-115	88.7
WP_021205282.1\|3755016_3755208_-	hypothetical protein	A0A0A0YQ21	Pseudomonas_phage	2.0e-29	98.4
WP_019486522.1\|3756004_3756436_-	hypothetical protein	H2BD44	Pseudomonas_phage	3.8e-63	93.1
WP_019486521.1\|3756432_3756861_-	hypothetical protein	A0A291AUJ5	Sinorhizobium_phage	2.3e-12	40.9
WP_025991892.1\|3756905_3757742_-	prohibitin family protein	A0A0A0YRT7	Pseudomonas_phage	2.2e-128	99.6
WP_019486519.1\|3757738_3757993_-	hypothetical protein	A0A0A0YUF2	Pseudomonas_phage	1.4e-38	98.8
WP_021205288.1\|3758092_3758326_-	hypothetical protein	A0A0A0YQ28	Pseudomonas_phage	6.6e-38	100.0
WP_033955697.1\|3758328_3758709_-	response regulator transcription factor	A0A1W6JTA9	Pseudomonas_phage	2.2e-30	61.2
WP_079383751.1\|3758822_3759593_-	helix-turn-helix transcriptional regulator	W6MVG5	Pseudomonas_phage	2.2e-61	52.3
WP_124142574.1\|3760506_3760824_+	hypothetical protein	A0A1W6JTB5	Pseudomonas_phage	5.2e-38	76.2
WP_079380365.1\|3760895_3761093_+	hypothetical protein	A0A1W6JTC3	Pseudomonas_phage	5.6e-14	69.2
WP_033955703.1\|3761089_3761398_+	hypothetical protein	A0A0A0YWH5	Pseudomonas_phage	9.3e-48	98.0
WP_033955705.1\|3761394_3761673_+	hypothetical protein	A0A0A0YR77	Pseudomonas_phage	9.9e-41	98.9
WP_033955708.1\|3761665_3761899_+	hypothetical protein	A0A0A0YRU7	Pseudomonas_phage	1.3e-33	97.4
WP_045404389.1\|3761895_3762660_+	phage-like protein	A0A1W6JTB2	Pseudomonas_phage	4.5e-136	98.0
WP_023124259.1\|3762656_3762887_+	hypothetical protein	A0A1W6JTF8	Pseudomonas_phage	2.0e-39	98.7
WP_023086959.1\|3762883_3763723_+	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	7.9e-150	96.1
WP_052159129.1\|3763898_3764519_+	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	6.5e-109	99.0
WP_059399862.1\|3764515_3765913_+	AAA family ATPase	A0A1W6JTB3	Pseudomonas_phage	8.5e-266	99.8
WP_015648203.1\|3765909_3766188_+	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	2.3e-45	100.0
WP_004353175.1\|3766184_3766574_+	hypothetical protein	A0A1W6JTD2	Pseudomonas_phage	2.2e-70	99.2
WP_011805433.1\|3767109_3768531_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_023086963.1\|3769284_3769617_+\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	2.2e-55	98.2
WP_094069683.1\|3769613_3770231_+	glycoside hydrolase family 19 protein	A0A1W6JTC9	Pseudomonas_phage	1.2e-102	89.2
WP_094069743.1\|3770230_3770470_+	hypothetical protein	A0A0H5AWC3	Pseudomonas_phage	1.1e-19	51.9
WP_094069684.1\|3770466_3770937_+\|lysis	lysis protein	A0A1B0Z001	Pseudomonas_phage	3.1e-71	91.0
WP_094069685.1\|3770933_3771677_+	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	1.4e-134	99.2
WP_003159067.1\|3771796_3772342_+	DNA packaging dimer small subunit	A0A1B0Z033	Pseudomonas_phage	2.1e-95	98.9
WP_023086966.1\|3772313_3774278_+\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	0.0e+00	98.3
WP_003159069.1\|3774268_3774484_+	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	6.5e-32	100.0
WP_019486499.1\|3774483_3776130_+\|portal	phage portal protein	A0A1W6JTB6	Pseudomonas_phage	0.0e+00	99.8
WP_019486498.1\|3776089_3778183_+\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	0.0e+00	99.3
WP_019486497.1\|3778249_3778567_+	DUF2190 family protein	A0A1W6JT93	Pseudomonas_phage	1.7e-49	99.0
WP_019486496.1\|3778563_3778893_+	hypothetical protein	A0A1W6JT71	Pseudomonas_phage	1.2e-56	98.2
WP_023101769.1\|3778889_3779360_+	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	2.0e-86	99.4
WP_034068506.1\|3779363_3779558_+	hypothetical protein	A0A1W6JT79	Pseudomonas_phage	1.3e-26	95.3
WP_023086968.1\|3779559_3780312_+	hypothetical protein	A0A1W6JT83	Pseudomonas_phage	8.1e-138	99.2
WP_071538383.1\|3780636_3780828_+	hypothetical protein	NA	NA	NA	NA
WP_029528987.1\|3780884_3781187_+\|tail	phage tail assembly protein	A0A1W6JT80	Pseudomonas_phage	5.9e-47	98.0
WP_034068508.1\|3781289_3783773_+	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	0.0e+00	98.3
WP_029528986.1\|3783812_3784334_+	hypothetical protein	A0A1W6JT98	Pseudomonas_phage	2.8e-97	97.7
WP_074227459.1\|3784333_3786031_+	hypothetical protein	A0A1W6JTA3	Pseudomonas_phage	0.0e+00	96.5
WP_019486489.1\|3786033_3786444_+	hypothetical protein	A0A1B0YZV0	Pseudomonas_phage	1.1e-59	88.9
WP_073659933.1\|3787000_3787405_+	hypothetical protein	A0A0A0YR47	Pseudomonas_phage	1.5e-66	99.3
WP_023086972.1\|3787401_3789072_+	hypothetical protein	A0A0A0YRR5	Pseudomonas_phage	7.0e-206	61.8
WP_023086973.1\|3789099_3789687_+	hypothetical protein	A0A0U4B0K9	Pseudomonas_phage	3.0e-103	96.4
WP_023086974.1\|3789679_3789871_+	hypothetical protein	A0A1B0Z2L3	Pseudomonas_phage	2.0e-29	98.4
WP_019486484.1\|3789875_3790436_+	hypothetical protein	A0A1W6JT84	Pseudomonas_phage	2.9e-100	99.5
WP_023103825.1\|3790436_3790718_+	hypothetical protein	A0A1W6JTD4	Pseudomonas_phage	1.8e-45	98.9
WP_031640388.1\|3790710_3791274_+	hypothetical protein	A0A0A0YRS1	Pseudomonas_phage	1.9e-99	100.0
WP_023103826.1\|3791273_3791576_+	hypothetical protein	A0A0A0YUD8	Pseudomonas_phage	1.4e-48	98.0
WP_019486481.1\|3791572_3791812_+	hypothetical protein	A0A0A0YQ17	Pseudomonas_phage	5.0e-33	92.2
WP_019486480.1\|3791884_3792109_+	hypothetical protein	A0A1W6JT95	Pseudomonas_phage	4.7e-33	98.6
WP_021264318.1\|3792745_3793624_-	hypothetical protein	NA	NA	NA	NA
3792329:3792357	attR	NA	NA	NA	NA
WP_003085795.1\|3793711_3794395_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003085798.1\|3794503_3795445_+	alpha/beta hydrolase	A0A1D8EUH4	Mycobacterium_phage	4.4e-08	33.3

DBSCAN-SWA_7

5075070 : 5128650

Pseudomonas_phage(84.51%)

terminase,head,integrase

attL 5075707:5075722|attR 5078791:5078806

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003111315.1\|5075070_5076660_-	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	5.9e-61	28.3
5075707:5075722	attL	NA	NA	NA	NA
WP_033989293.1\|5076690_5077908_-\|integrase	site-specific integrase	A0A125RNP5	Pseudomonas_phage	6.6e-230	99.0
WP_071537486.1\|5078186_5078621_-	DUF2591 family protein	A0A125RNP6	Pseudomonas_phage	3.8e-79	96.5
WP_094069691.1\|5078617_5078977_-	hypothetical protein	A0A1L2C9A6	Pseudomonas_phage	2.5e-12	40.9
5078791:5078806	attR	NA	NA	NA	NA
WP_094069692.1\|5078973_5079633_-	hypothetical protein	Q9MC82	Pseudomonas_phage	1.5e-50	53.5
WP_124142510.1\|5079629_5079833_-	hypothetical protein	A0A127KNH7	Pseudomonas_phage	3.8e-34	100.0
WP_094069693.1\|5079833_5080118_-	hypothetical protein	V5JXG1	Pseudomonas_phage	4.4e-28	63.0
WP_094069694.1\|5080120_5080606_-	hypothetical protein	W6MVE9	Pseudomonas_phage	1.4e-87	97.5
WP_094069695.1\|5080777_5081095_-	hypothetical protein	A0A1B0Z2L6	Pseudomonas_phage	7.1e-51	93.3
WP_094069696.1\|5081139_5081460_-	hypothetical protein	A0A0A1IUI9	Pseudomonas_phage	3.7e-15	89.1
WP_003159448.1\|5081452_5081653_-	hypothetical protein	A0A0S2SY76	Pseudomonas_phage	2.9e-34	100.0
WP_016852531.1\|5081642_5082305_-	hypothetical protein	Q9MC60	Pseudomonas_phage	4.9e-46	51.8
WP_016852532.1\|5082297_5082579_-	DUF4031 domain-containing protein	A0A125RNQ7	Pseudomonas_phage	3.6e-46	100.0
WP_094069697.1\|5083822_5084047_-	hypothetical protein	A0A0U4J8X2	Pseudomonas_phage	6.5e-35	94.6
WP_094069698.1\|5084209_5084809_-	hypothetical protein	A0A0U4JEE7	Pseudomonas_phage	2.8e-109	98.0
WP_094069699.1\|5084872_5085154_-	hypothetical protein	A0A0H5AW97	Pseudomonas_phage	1.7e-24	74.3
WP_094069700.1\|5085157_5085775_-	YqaJ-like viral recombinase	S0A2A9	Cellulophaga_phage	4.0e-42	45.8
WP_070136378.1\|5085743_5086277_-	hypothetical protein	A0A0F7L6F4	uncultured_marine_virus	9.2e-11	35.6
WP_094069701.1\|5086867_5087677_-	DNA cytosine methyltransferase	A0A2I7QZY6	Vibrio_phage	1.7e-61	50.9
WP_094069702.1\|5087796_5088663_-	hypothetical protein	A5H1K2	Xanthomonas_virus	9.4e-21	38.8
WP_059399942.1\|5088659_5089025_-	hypothetical protein	B5WZX0	Pseudomonas_phage	1.2e-62	95.0
WP_058011984.1\|5089697_5090075_-	hypothetical protein	W6MWX7	Pseudomonas_phage	1.4e-66	98.4
WP_094069703.1\|5090108_5090438_-	hypothetical protein	A0A0S2SY55	Pseudomonas_phage	3.6e-05	96.3
WP_124142509.1\|5090608_5091208_-	hypothetical protein	J7I0S5	Pseudomonas_phage	7.9e-43	46.0
WP_094069704.1\|5091381_5091639_-	hypothetical protein	NA	NA	NA	NA
WP_024008042.1\|5092229_5092670_-	hypothetical protein	A0A0S2SYH1	Pseudomonas_phage	2.4e-81	99.3
WP_031294330.1\|5092678_5093185_-	hypothetical protein	A0A0S2SYL8	Pseudomonas_phage	1.1e-82	98.8
WP_124142508.1\|5093582_5093954_-	hypothetical protein	A0A0S2SYA3	Pseudomonas_phage	3.7e-59	97.6
WP_033986515.1\|5093940_5094735_-	hypothetical protein	A0A0S2SYC3	Pseudomonas_phage	3.0e-143	100.0
WP_071562130.1\|5094892_5095381_-	hypothetical protein	NA	NA	NA	NA
WP_033949562.1\|5095428_5096094_-	helix-turn-helix domain-containing protein	H2BDH4	Pseudomonas_virus	3.0e-43	39.7
WP_023099006.1\|5096383_5096695_+	hypothetical protein	H6WRX6	Salmonella_phage	1.8e-14	50.6
WP_024007929.1\|5096770_5097523_+	hypothetical protein	A0A059VF66	Pseudomonas_phage	6.8e-68	56.4
WP_024007930.1\|5097522_5098329_+	hypothetical protein	A0A2H4J580	uncultured_Caudovirales_phage	1.2e-142	90.2
WP_094069706.1\|5098318_5099134_+	ATP-binding protein	A0A059VK34	Pseudomonas_phage	5.3e-74	53.6
WP_094069707.1\|5099275_5100043_+	HNH endonuclease	A0A2I7S653	Vibrio_phage	6.4e-21	39.0
WP_023910158.1\|5100039_5100549_+	hypothetical protein	H2BDI1	Pseudomonas_virus	2.9e-86	98.8
WP_023111248.1\|5100550_5100760_+	hypothetical protein	A0A0S2SYW7	Pseudomonas_phage	1.2e-22	79.1
WP_079382865.1\|5100759_5100957_+	hypothetical protein	A0A0U4JX40	Pseudomonas_phage	1.1e-25	81.5
WP_023081919.1\|5100956_5101208_+	hypothetical protein	NA	NA	NA	NA
WP_124148375.1\|5101200_5101476_+	hypothetical protein	NA	NA	NA	NA
WP_003101074.1\|5101468_5102056_+	DUF1367 family protein	Q9MC49	Pseudomonas_phage	1.9e-110	100.0
WP_094069708.1\|5102052_5102313_+	hypothetical protein	H2BDI5	Pseudomonas_virus	5.5e-09	52.2
WP_157740144.1\|5102309_5102468_+	hypothetical protein	A0A0S2SYG6	Pseudomonas_phage	1.2e-19	98.1
WP_033989763.1\|5102464_5102698_+	hypothetical protein	A0A0S2SYK5	Pseudomonas_phage	4.7e-36	97.4
WP_094069709.1\|5102694_5103336_+	hypothetical protein	Q9MC46	Pseudomonas_phage	4.0e-109	92.5
WP_033959088.1\|5103335_5103653_+	hypothetical protein	Q9MC45	Pseudomonas_phage	4.7e-47	95.2
WP_094069710.1\|5103723_5104410_+	hypothetical protein	A0A0S2SYA9	Pseudomonas_phage	4.8e-129	97.4
WP_094069711.1\|5104802_5105135_+	peptidase M48, Ste24p	A0A125RNL3	Pseudomonas_phage	1.7e-55	99.1
WP_023098997.1\|5105137_5105410_+	hypothetical protein	A0A125RNL4	Pseudomonas_phage	8.8e-42	100.0
WP_043090794.1\|5105406_5106030_+	hypothetical protein	A0A125RNL5	Pseudomonas_phage	5.7e-121	98.6
WP_023098995.1\|5106061_5106529_+	DUF2280 domain-containing protein	A0A125RNL6	Pseudomonas_phage	2.3e-82	100.0
WP_094069712.1\|5106509_5107766_+\|terminase	terminase	H2BD76	Pseudomonas_phage	5.5e-248	99.5
WP_033986527.1\|5107765_5107963_+	hypothetical protein	H2BD77	Pseudomonas_phage	1.2e-27	98.5
WP_094069713.1\|5107965_5109336_+	DUF1073 domain-containing protein	A0A125RNL9	Pseudomonas_phage	2.7e-264	98.7
WP_094069714.1\|5109292_5110222_+\|head	phage head morphogenesis protein	H2BD79	Pseudomonas_phage	1.2e-167	97.4
WP_094069715.1\|5110225_5111503_+	hypothetical protein	A0A125RNM1	Pseudomonas_phage	1.5e-213	99.1
WP_094069716.1\|5111506_5111956_+	hypothetical protein	A0A125RNM2	Pseudomonas_phage	2.4e-76	98.0
WP_094069717.1\|5111971_5113066_+	hypothetical protein	J7I0Q9	Pseudomonas_phage	9.2e-207	98.4
WP_023083731.1\|5113076_5113535_+	hypothetical protein	A0A125RNM4	Pseudomonas_phage	8.7e-50	74.3
WP_094069718.1\|5113619_5114021_+	hypothetical protein	J7HX89	Pseudomonas_phage	2.3e-70	97.7
WP_058134970.1\|5114017_5114356_+	hypothetical protein	A0A125RNM7	Pseudomonas_phage	5.2e-60	99.1
WP_058134968.1\|5114357_5114762_+	hypothetical protein	H2BD87	Pseudomonas_phage	4.8e-68	98.5
WP_003127992.1\|5114758_5115133_+	hypothetical protein	J7I407	Pseudomonas_phage	5.7e-68	100.0
WP_094069719.1\|5115147_5116143_+	Ig domain-containing protein	H2BD89	Pseudomonas_phage	2.5e-166	95.8
WP_016852772.1\|5116139_5116757_+	hypothetical protein	A0A125RNN1	Pseudomonas_phage	2.6e-113	99.5
WP_094069720.1\|5116756_5119246_+	tape measure protein	J7HXG0	Pseudomonas_phage	0.0e+00	92.2
WP_023082503.1\|5119242_5119710_+	hypothetical protein	H2BD92	Pseudomonas_phage	7.1e-92	98.7
WP_023517963.1\|5119693_5120185_+	DUF1833 family protein	J7I404	Pseudomonas_phage	4.9e-91	99.4
WP_094069721.1\|5120189_5120597_+	hypothetical protein	J7HX80	Pseudomonas_phage	5.1e-70	94.1
WP_094069722.1\|5120568_5123292_+	hypothetical protein	A0A127KNI3	Pseudomonas_phage	0.0e+00	84.7
WP_094069723.1\|5123352_5125410_+	structural protein	J7HXC9	Pseudomonas_phage	0.0e+00	90.7
WP_011805433.1\|5125887_5127309_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_094069724.1\|5127395_5128025_+	glycoside hydrolase family 19 protein	J7I4M6	Pseudomonas_phage	3.0e-109	93.8
WP_094069725.1\|5128021_5128390_+	hypothetical protein	H2BDA0	Pseudomonas_phage	1.5e-39	75.4
WP_094069726.1\|5128386_5128650_+	hypothetical protein	B5WZU5	Pseudomonas_phage	9.7e-38	93.1

DBSCAN-SWA_8

5931327 : 5987919

Pseudomonas_phage(62.5%)

terminase,tail,holin,integrase

attL 5937584:5937601|attR 5998336:5998353

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034017583.1\|5931327_5931840_+	hypothetical protein	L7TIE6	Pseudomonas_virus	3.5e-92	92.3
WP_003102455.1\|5931843_5932110_-	hypothetical protein	L7TP56	Pseudomonas_virus	1.8e-44	98.9
WP_034017585.1\|5932145_5932406_-	hypothetical protein	H2BDD7	Pseudomonas_virus	2.6e-35	88.4
WP_094069591.1\|5932402_5932771_-	hypothetical protein	H2BDA0	Pseudomonas_phage	1.8e-29	60.7
WP_003088477.1\|5932767_5933397_-	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	1.0e-109	94.7
WP_011805433.1\|5933483_5934905_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_031300639.1\|5935361_5936102_-	hypothetical protein	A0A2H4J1J6	uncultured_Caudovirales_phage	3.1e-57	59.4
WP_094069592.1\|5937445_5941012_-\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	80.5
5937584:5937601	attL	NA	NA	NA	NA
WP_031688063.1\|5941070_5941571_-	DNA-binding protein	Q9XJS9	Pseudomonas_phage	2.2e-59	65.9
WP_094069593.1\|5941894_5942458_-\|tail	tail assembly protein	A0A2H4J1H0	uncultured_Caudovirales_phage	2.8e-66	68.6
WP_094069594.1\|5942454_5943210_-	C40 family peptidase	A0A0S2SY75	Pseudomonas_phage	1.9e-118	78.1
WP_033997423.1\|5943212_5943959_-\|tail	phage minor tail protein L	A0A0S2SY57	Pseudomonas_phage	8.7e-116	76.7
WP_009314083.1\|5943955_5944294_-\|tail	phage tail protein	A0A0S2SYI2	Pseudomonas_phage	1.1e-28	52.7
WP_094069595.1\|5944283_5947442_-\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	4.8e-107	33.0
WP_094069596.1\|5947787_5948276_-	hypothetical protein	NA	NA	NA	NA
WP_046720515.1\|5948334_5949504_-	Ig-like domain-containing protein	A0A059VG08	Pseudomonas_phage	7.6e-58	39.4
WP_094069597.1\|5949565_5949973_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_033977277.1\|5949969_5950368_-	hypothetical protein	A0A059VF88	Pseudomonas_phage	5.8e-26	48.4
WP_094069598.1\|5950367_5950832_-	hypothetical protein	A0A059VA70	Pseudomonas_phage	1.5e-25	48.4
WP_094069599.1\|5950746_5951739_-	hypothetical protein	A0A2H4IY91	uncultured_Caudovirales_phage	2.3e-84	49.9
WP_023121533.1\|5951735_5952254_-	hypothetical protein	A0A059VG19	Pseudomonas_phage	1.3e-38	55.3
WP_094069600.1\|5952311_5952755_-	hypothetical protein	NA	NA	NA	NA
WP_003116763.1\|5952767_5953697_-	DUF2184 domain-containing protein	L7TMZ5	Rhizobium_phage	1.2e-103	60.2
WP_058183093.1\|5953706_5954162_-	DUF2190 family protein	A0A2R3UAC1	Siphoviridae_environmental_samples	7.5e-38	59.1
WP_058183095.1\|5954161_5955283_-	DUF2213 domain-containing protein	A0A059VF71	Pseudomonas_phage	1.9e-114	61.6
WP_094069601.1\|5955285_5957094_-	DUF1073 domain-containing protein	A0A2H4J4I9	uncultured_Caudovirales_phage	3.4e-214	61.3
WP_094069602.1\|5957093_5958380_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	1.4e-145	59.0
WP_094069603.1\|5958366_5958963_-\|terminase	terminase small subunit	H2BD75	Pseudomonas_phage	4.4e-46	60.5
WP_003116758.1\|5958971_5959256_-\|holin	phage holin family protein	H2BD74	Pseudomonas_phage	1.2e-41	100.0
WP_004349441.1\|5959248_5959638_-	hypothetical protein	H2BD73	Pseudomonas_phage	9.9e-63	100.0
WP_033997397.1\|5959752_5960439_-	hypothetical protein	H2BD72	Pseudomonas_phage	2.2e-129	99.6
WP_094069604.1\|5960467_5960911_-	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	1.4e-73	94.6
WP_058010341.1\|5960903_5962319_-	replicative DNA helicase	H2BD70	Pseudomonas_phage	1.2e-262	99.6
WP_094069605.1\|5962311_5963334_-	DUF1376 domain-containing protein	H2BD69	Pseudomonas_phage	2.9e-186	97.1
WP_157740136.1\|5963371_5963614_+	hypothetical protein	NA	NA	NA	NA
WP_094069606.1\|5963604_5964177_-	hypothetical protein	H2BD67	Pseudomonas_phage	4.6e-101	98.9
WP_003451709.1\|5964208_5964427_-	helix-turn-helix domain-containing protein	A0A2D1GND2	Pseudomonas_phage	2.9e-19	64.7
WP_052435791.1\|5964804_5965377_+	LexA family transcriptional regulator	H2BD63	Pseudomonas_phage	3.2e-86	91.7
WP_094069607.1\|5966163_5966496_-	DUF1654 domain-containing protein	H2BD60	Pseudomonas_phage	2.2e-47	94.4
WP_094069608.1\|5966897_5967161_+	hypothetical protein	H2BD57	Pseudomonas_phage	2.8e-45	98.9
WP_034086322.1\|5967193_5967565_+	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	3.2e-63	98.4
WP_003099037.1\|5968199_5968421_+	hypothetical protein	H2BD53	Pseudomonas_phage	1.2e-33	100.0
WP_094069610.1\|5968417_5968606_+	hypothetical protein	Q9MC67	Pseudomonas_phage	1.5e-24	100.0
WP_124142433.1\|5968592_5968808_+	hypothetical protein	A0A0U4JX53	Pseudomonas_phage	3.7e-19	66.7
WP_094069611.1\|5968946_5969858_+	endonuclease	Q858E0	Salmonella_phage	4.8e-124	71.6
WP_094069612.1\|5969870_5970770_+	recombination protein RecT	Q858E1	Salmonella_phage	1.2e-103	72.9
WP_009314053.1\|5970776_5970977_+	hypothetical protein	J7I437	Pseudomonas_phage	1.9e-30	100.0
WP_094069613.1\|5971974_5973717_+	AAA family ATPase	J7HXJ7	Pseudomonas_phage	1.6e-282	91.5
WP_157740137.1\|5973997_5974648_-	hypothetical protein	NA	NA	NA	NA
WP_094069614.1\|5974764_5976828_+	DNA methyltransferase	Q5QF27	Pseudomonas_virus	0.0e+00	99.9
WP_094069735.1\|5976824_5977631_+	class I SAM-dependent methyltransferase	A0A2K8I312	Pseudomonas_phage	1.3e-154	98.9
WP_094069615.1\|5977627_5978056_+	hypothetical protein	H2BD44	Pseudomonas_phage	1.2e-72	95.8
WP_094069736.1\|5978205_5978700_+	DUF550 domain-containing protein	A0A1B0YZX5	Pseudomonas_phage	2.1e-86	90.2
WP_094069616.1\|5978696_5979020_+	DUF4406 domain-containing protein	H2BD42	Pseudomonas_phage	4.7e-58	99.1
WP_094069617.1\|5979016_5979658_+	hypothetical protein	Q5QF31	Pseudomonas_virus	2.7e-126	99.1
WP_094069618.1\|5979654_5980416_+	hypothetical protein	Q5QF32	Pseudomonas_virus	1.1e-147	97.6
WP_031692817.1\|5980423_5980825_+	hypothetical protein	NA	NA	NA	NA
WP_033955468.1\|5980821_5981328_+	hypothetical protein	L7TI83	Pseudomonas_virus	5.0e-83	93.5
WP_094069619.1\|5981425_5982019_+	hypothetical protein	L7TKP8	Pseudomonas_virus	1.9e-28	36.6
WP_094069620.1\|5982112_5982499_+	hypothetical protein	A0A2K8HZQ6	Pseudomonas_phage	2.3e-64	98.4
WP_071549158.1\|5982554_5982788_+	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	1.9e-13	50.7
WP_079388946.1\|5982816_5983854_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	6.2e-112	58.6
WP_021264888.1\|5984316_5984850_-	hypothetical protein	NA	NA	NA	NA
WP_021264889.1\|5984940_5987919_-	transporter substrate-binding domain-containing protein	A0A1V0SGX0	Hokovirus	2.0e-33	27.4
5998336:5998353	attR	NA	NA	NA	NA

DBSCAN-SWA_9

6014926 : 6021820

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021264895.1\|6014926_6015595_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.9e-90	81.6
WP_023099506.1\|6015705_6016101_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	4.5e-47	71.3
WP_003090389.1\|6016097_6016457_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_021264896.1\|6016456_6016762_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_021264897.1\|6016758_6017094_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	9.5e-38	68.5
WP_003108776.1\|6017090_6018074_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	9.3e-142	74.3
WP_003097628.1\|6018161_6019136_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003108773.1\|6019140_6020538_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003097631.1\|6020539_6021820_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4

DBSCAN-SWA_10

6124173 : 6163694

Pseudomonas_phage(100.0%)

lysis,transposase,head,integrase

attL 6120258:6120278|attR 6163835:6163855

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6120258:6120278	attL	NA	NA	NA	NA
WP_003127781.1\|6124173_6124542_-	hypothetical protein	J9SGX4	Pseudomonas_phage	1.1e-63	100.0
WP_003117363.1\|6124538_6125087_-	hypothetical protein	J9RWB3	Pseudomonas_phage	2.1e-98	100.0
WP_014603985.1\|6125086_6125653_-	regulatory protein GemA	J9SVT5	Pseudomonas_phage	5.4e-102	100.0
WP_016852433.1\|6125639_6126107_-	hypothetical protein	J9STM8	Pseudomonas_phage	8.5e-77	100.0
WP_003127807.1\|6126106_6126298_-	hypothetical protein	J9SNB0	Pseudomonas_phage	8.6e-28	100.0
WP_003127809.1\|6126299_6126989_-	DUF2786 domain-containing protein	J9SGY5	Pseudomonas_phage	2.0e-127	100.0
WP_003094190.1\|6126990_6127614_-	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	2.0e-110	100.0
WP_003148482.1\|6127606_6127807_-	hypothetical protein	J9SVU3	Pseudomonas_phage	2.7e-32	100.0
WP_023123655.1\|6127799_6128333_-	hypothetical protein	J9STN6	Pseudomonas_phage	2.5e-93	99.4
WP_023123656.1\|6128322_6129003_-	hypothetical protein	J9SNC1	Pseudomonas_phage	2.6e-127	98.7
WP_014603990.1\|6129002_6129287_-	hypothetical protein	J9SGZ7	Pseudomonas_phage	3.4e-44	100.0
WP_023123657.1\|6129283_6129625_-	hypothetical protein	J9RWC3	Pseudomonas_phage	5.4e-57	100.0
WP_016852441.1\|6129626_6130793_-	AAA family ATPase	J9SVV1	Pseudomonas_phage	1.0e-216	100.0
WP_031694143.1\|6130792_6132577_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	98.3
WP_010791821.1\|6132580_6133555_-	hypothetical protein	J9RW58	Pseudomonas_phage	1.0e-153	98.1
WP_003142307.1\|6133564_6133879_-	hypothetical protein	J9SUN0	Pseudomonas_phage	2.9e-49	98.1
WP_003142306.1\|6133875_6134136_-	hypothetical protein	J9RWD0	Pseudomonas_phage	1.5e-38	95.3
WP_010791820.1\|6134128_6134617_-	hypothetical protein	J9SNL8	Pseudomonas_phage	2.8e-91	99.4
WP_015649394.1\|6134740_6134965_+	hypothetical protein	NA	NA	NA	NA
WP_003142304.1\|6135249_6135480_-	DNA-binding protein	J9RW65	Pseudomonas_phage	2.5e-37	100.0
WP_031633370.1\|6135586_6135925_+	helix-turn-helix domain-containing protein	J9SH16	Pseudomonas_phage	2.4e-12	82.6
WP_010791819.1\|6135941_6136445_+	hypothetical protein	J9RWD8	Pseudomonas_phage	4.0e-80	92.8
WP_003094225.1\|6136635_6136893_+	membrane protein	A0A0S4L5C0	Pseudomonas_phage	7.2e-38	100.0
WP_010791818.1\|6137050_6137680_+	transglycosylase SLT domain-containing protein	J9SH25	Pseudomonas_phage	2.2e-120	99.5
WP_019485965.1\|6137881_6138505_+\|lysis	Rz lysis protein	J9SVX5	Pseudomonas_phage	1.0e-109	99.0
WP_003117315.1\|6138504_6138825_+	DUF2730 family protein	J9STR5	Pseudomonas_phage	5.1e-49	100.0
WP_003121465.1\|6138821_6139124_+	hypothetical protein	J9SNG3	Pseudomonas_phage	4.1e-48	99.0
WP_003121466.1\|6139126_6139675_+	DUF3486 family protein	J9SH37	Pseudomonas_phage	6.4e-76	98.9
WP_003126996.1\|6139676_6141350_+	hypothetical protein	J9RWF2	Pseudomonas_phage	0.0e+00	99.3
WP_003126994.1\|6141352_6142918_+	DUF935 domain-containing protein	J9SVY0	Pseudomonas_phage	5.8e-287	96.4
WP_003126992.1\|6142907_6144146_+	hypothetical protein	J9STS2	Pseudomonas_phage	1.0e-241	99.5
WP_015649417.1\|6144147_6144723_+	phage virion morphogenesis protein	J9SNH3	Pseudomonas_phage	1.7e-103	99.0
WP_003129234.1\|6144933_6146043_+	hypothetical protein	J9SH47	Pseudomonas_phage	5.3e-202	99.7
WP_003121593.1\|6146048_6146453_+	hypothetical protein	J9RWG0	Pseudomonas_phage	1.8e-67	100.0
WP_003127513.1\|6146467_6147364_+\|head	head protein	J9SVY7	Pseudomonas_phage	1.3e-171	100.0
WP_003121493.1\|6147595_6147811_+	hypothetical protein	J9STT1	Pseudomonas_phage	1.5e-33	100.0
WP_003121492.1\|6147813_6148329_+	DUF1320 domain-containing protein	J9SNI4	Pseudomonas_phage	3.5e-92	100.0
WP_003127511.1\|6148325_6148778_+	hypothetical protein	J9SH57	Pseudomonas_phage	5.5e-81	100.0
WP_003127509.1\|6148774_6148978_+	hypothetical protein	J9RWG5	Pseudomonas_phage	1.7e-29	100.0
WP_010791812.1\|6148984_6149725_+	hypothetical protein	J9SVZ4	Pseudomonas_phage	1.2e-136	100.0
WP_023086241.1\|6149727_6150210_+	hypothetical protein	J9STT8	Pseudomonas_phage	1.3e-83	100.0
WP_049967619.1\|6150164_6150347_-	hypothetical protein	J9SNJ6	Pseudomonas_phage	1.2e-26	100.0
WP_031655034.1\|6150463_6154096_+	tape measure protein	J9SH65	Pseudomonas_phage	0.0e+00	96.3
WP_023123676.1\|6154095_6155052_+	hypothetical protein	L7P7S3	Pseudomonas_phage	1.9e-184	94.3
WP_023127652.1\|6155053_6155977_+	hypothetical protein	J9SVR7	Pseudomonas_phage	3.8e-177	96.1
WP_023123220.1\|6155979_6157686_+	hypothetical protein	Q5ZQW3	Pseudomonas_phage	0.0e+00	96.7
WP_023123221.1\|6157672_6158491_+	DUF2163 domain-containing protein	J9SN93	Pseudomonas_phage	3.8e-165	99.3
WP_023117665.1\|6158513_6158744_+	hypothetical protein	J9SHJ9	Pseudomonas_phage	2.7e-36	100.0
WP_033946000.1\|6158957_6161168_+	bacteriophage protein	A0A0S4L2V2	Pseudomonas_phage	0.0e+00	97.3
WP_003094288.1\|6161164_6162313_+	hypothetical protein	J9SP76	Pseudomonas_phage	9.0e-213	92.9
WP_003094290.1\|6162309_6162600_+	hypothetical protein	A0A0A7DJU8	Pseudomonas_phage	2.6e-44	95.7
WP_015649444.1\|6162738_6162930_+	Com family DNA-binding transcriptional regulator	Q5ZQW8	Pseudomonas_phage	6.6e-20	73.0
WP_031800187.1\|6162899_6163694_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	2.3e-143	90.5
6163835:6163855	attR	NA	NA	NA	NA

DBSCAN-SWA_11

6382402 : 6422632

Burkholderia_phage(16.67%)

transposase,protease,integrase

attL 6405579:6405594|attR 6423126:6423141

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026006646.1\|6382402_6383380_-\|transposase	IS5-like element ISPsp6 family transposase	E5E3P6	Burkholderia_phage	8.2e-98	58.9
WP_094069624.1\|6383452_6384199_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_034021343.1\|6384278_6385079_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_034021344.1\|6385211_6385775_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_102059483.1\|6387149_6388727_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	3.7e-108	43.4
WP_082431507.1\|6388798_6389086_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_034021398.1\|6389121_6389499_-\|transposase	transposase	NA	NA	NA	NA
WP_034021348.1\|6390621_6391254_+	hypothetical protein	NA	NA	NA	NA
WP_060427508.1\|6391257_6392370_+	NAD-binding protein	NA	NA	NA	NA
WP_034021350.1\|6392499_6393132_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_034081111.1\|6393294_6393573_+	EF-hand domain-containing protein	NA	NA	NA	NA
WP_055646740.1\|6393619_6394195_+	hypothetical protein	NA	NA	NA	NA
WP_034021357.1\|6395257_6396367_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_034021360.1\|6396446_6397061_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_034021363.1\|6397149_6398610_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_060427634.1\|6398844_6399750_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_034021365.1\|6399846_6400632_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_014003920.1\|6400719_6401700_+\|transposase	IS5-like element ISPa41 family transposase	Q38213	Escherichia_phage	1.4e-102	59.2
WP_060546574.1\|6403043_6406199_+	hypothetical protein	NA	NA	NA	NA
6405579:6405594	attL	NA	NA	NA	NA
WP_114260891.1\|6406697_6407210_+	hypothetical protein	NA	NA	NA	NA
WP_114260892.1\|6407310_6407757_+	hypothetical protein	NA	NA	NA	NA
WP_034021374.1\|6407883_6410268_+	hypothetical protein	NA	NA	NA	NA
WP_034021402.1\|6410373_6412308_-\|integrase	tyrosine-type recombinase/integrase	A0A0U1UNT3	Pseudomonas_phage	1.5e-103	49.1
WP_012613931.1\|6412902_6413676_+	hypothetical protein	NA	NA	NA	NA
WP_003098798.1\|6413737_6414400_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_021264209.1\|6414409_6414892_-	GAF domain-containing protein	NA	NA	NA	NA
WP_003090906.1\|6414888_6415779_-	ATP-binding protein	NA	NA	NA	NA
WP_003130830.1\|6415861_6418222_+	response regulator	A0A1V0SGX0	Hokovirus	1.3e-45	28.3
WP_003090908.1\|6418240_6418732_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003090910.1\|6418728_6419214_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	8.1e-22	40.0
WP_003090911.1\|6419325_6419724_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_003090913.1\|6419908_6421120_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003115276.1\|6421170_6421623_+	hypothetical protein	NA	NA	NA	NA
WP_003090915.1\|6421756_6422632_+\|protease	protease HtpX	NA	NA	NA	NA
6423126:6423141	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP022525.1|WP_003158159.1|3140191_3140515_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP022525.1|WP_003158160.1|3140533_3140926_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP022525.1|WP_003158163.1|3142667_3143042_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP022525.1|WP_003158159.1|3140191_3140515_-|hypothetical-protein

3140191_3140515_-

107 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|15	0.6213592233009708	0.9719626168224299	0.99

NZ_CP022525.1|WP_003158160.1|3140533_3140926_-|hypothetical-protein

3140533_3140926_-

130 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|3	0.4251968503937008	0.9307692307692308	0.8785714285714286

NZ_CP022525.1|WP_003158163.1|3142667_3143042_-|hypothetical-protein

3142667_3143042_-

124 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|27	1.0	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022525

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information