CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP020027	Streptococcus pyogenes strain STAB090229 chromosome, complete genome	3 crisprs	DinG,csm6,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh,csa3	0	6	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020027_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020027_1

112496-112685

Orphan

Consensus_repeat	Method
AAGAAGTCCCAGAAGTTCCAAGCGAGAGCTTAGAACCTGCGCTTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020027_1

>merge|NZ_CP020027|1|112496-112685|CRISPRCasFinder
AAGAAGTCCCAGAAGTTCCAAGCGAGAGCTTAGAACCTGCGCTTCCCCCATTGATGCCAGAGCTAGATGGTGAAGAAGTCCCAGAAGTTCCAAGCGAGAGCTTAGAACCTGCGCTTCCCCCATTAATGCCAGAGCTAGATGGCCAAGAAGTCCCAGAAGTTTCAAGCGAGAGCTTAGAACCTGCGCTTCC

>NZ_CP020027|1|1|112496-112685|CRISPRCasFinder
AAGAAGTCCCAGAAGTTCCAAGCGAGAGCTTAGAACCTGCGCTTCC	CCCATTGATGCCAGAGCTAGATGGTGAAGAAGTCCCAGAAGTTCCAAGCGAGAGCTTAGAACCTGCGCTTCCCCCATTAATGCCAGAGCTAGATGGCC
AAGAAGTCCCAGAAGTTTCAAGCGAGAGCTTAGAACCTGCGCTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020027.1\|WP_076639387.1\|118264_119122_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676
NZ_CP020027.1\|WP_076639393.1\|109806_111300_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|285470
NZ_CP020027.1\|WP_172841104.1\|119191_124324_+\|fibrinogen-binding-adhesin-SdrG-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|380076
NZ_CP020027.1\|WP_076639390.1\|114685_116383_+\|SpaH/EbpB-family-LPXTG-anchored-major-pilin	unknown	unknown	gnl\|CDD\|275067
NZ_CP020027.1\|WP_002986515.1\|105395_105713_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP020027.1\|WP_002986518.1\|105105_105399_+\|DUF4651-domain-containing-protein	unknown	unknown	gnl\|CDD\|339494
NZ_CP020027.1\|WP_076639394.1\|107823_108801_-\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|129820
NZ_CP020027.1\|WP_076639389.1\|116465_117398_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|380024
NZ_CP020027.1\|WP_002986499.1\|108787_109660_-\|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl\|CDD\|234643
NZ_CP020027.1\|WP_002986511.1\|105730_106357_+\|DUF4479-and-tRNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|239196
NZ_CP020027.1\|WP_002986455.1\|129127_129787_+\|CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|224702
NZ_CP020027.1\|WP_076639385.1\|124500_125166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020027.1\|WP_076639397.1\|102764_103535_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP020027.1\|WP_076639384.1\|127931_129116_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP020027.1\|WP_076639395.1\|107162_107804_-\|deoxynucleoside-kinase	unknown	unknown	gnl\|CDD\|224345
NZ_CP020027.1\|WP_161237316.1\|125425_126832_+\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
NZ_CP020027.1\|WP_012560390.1\|103582_104650_-\|glutamyl-aminopeptidase	unknown	unknown	gnl\|CDD\|132151
NZ_CP020027.1\|WP_002986463.1\|126899_127811_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP020027.1\|WP_003053955.1\|106507_106903_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|180914
NZ_CP020027.1\|WP_168390471.1\|117375_118251_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676

Protein	Function_ID	Function_description	E-value
NZ_CP020027.1\|WP_076639387.1\|118264_119122_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	8.04292e-78
NZ_CP020027.1\|WP_076639393.1\|109806_111300_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	6.59015e-61
NZ_CP020027.1\|WP_172841104.1\|119191_124324_+\|fibrinogen-binding-adhesin-SdrG-C-terminal-domain-containing-protein	gnl\|CDD\|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	5.66092e-18
NZ_CP020027.1\|WP_076639390.1\|114685_116383_+\|SpaH/EbpB-family-LPXTG-anchored-major-pilin	gnl\|CDD\|275067	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain. The Streptococcus Pneumoniae pilus backbone protein, RrgB, has three tandem domains with Lys-to-Asn isopeptide bonds, but these three regions are extremely divergent in sequence. This model represents the homology domain family of the D2 domain. It occurs just once in many surface proteins but up to twenty times in some pilin subunit proteins. Three of every four members have the typical Gram-positive C-terminal motif, LPXTG, although in many cases this motif may be involved in pilin subunit cross-linking rather than cell wall attachment. Proteins with this domain include fimbrial proteins with lectin-like adhesion functions, and the majority of characterized members are involved in surface adhesion to host structures.	7.29668e-16
NZ_CP020027.1\|WP_002986515.1\|105395_105713_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.40404e-25
NZ_CP020027.1\|WP_002986518.1\|105105_105399_+\|DUF4651-domain-containing-protein	gnl\|CDD\|339494	pfam15513, DUF4651, Domain of unknown function (DUF4651). family of short, secreted proteins specific to the Streptococcus genus, with distant homologs, not recognized by this HMM, found in other cocci. In all sequenced genomes, proteins from this family appear in a conserved genomic context with an thioredoxin, tRNA synthase and tRNA binding protein, but the functional implication of this is unclear.	8.86115e-29
NZ_CP020027.1\|WP_076639394.1\|107823_108801_-\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	8.16988e-121
NZ_CP020027.1\|WP_076639389.1\|116465_117398_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|380024	pfam17802, SpaA, Prealbumin-like fold domain. This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae. Some members of this family contain an isopeptide bond.	2.27729e-13
NZ_CP020027.1\|WP_002986499.1\|108787_109660_-\|Hsp33-family-molecular-chaperone-HslO	gnl\|CDD\|234643	PRK00114, hslO, Hsp33 family molecular chaperone HslO.	8.33794e-149
NZ_CP020027.1\|WP_002986511.1\|105730_106357_+\|DUF4479-and-tRNA-binding-domain-containing-protein	gnl\|CDD\|239196	cd02796, tRNA_bind_bactPheRS, tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate the 2'OH of the terminal ribose of tRNA they belong functionally to class 1 aaRSs. This domain has general tRNA binding properties and is believed to direct tRNAphe to the active site of the enzyme.	1.22775e-48
NZ_CP020027.1\|WP_002986455.1\|129127_129787_+\|CoA-transferase-subunit-A	gnl\|CDD\|224702	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism].	4.65529e-110
NZ_CP020027.1\|WP_002986463.1\|126899_127811_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.29311e-29
NZ_CP020027.1\|WP_076639397.1\|102764_103535_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	5.48237e-107
NZ_CP020027.1\|WP_076639384.1\|127931_129116_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP020027.1\|WP_076639395.1\|107162_107804_-\|deoxynucleoside-kinase	gnl\|CDD\|224345	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism].	7.21551e-96
NZ_CP020027.1\|WP_161237316.1\|125425_126832_+\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	0
NZ_CP020027.1\|WP_012560390.1\|103582_104650_-\|glutamyl-aminopeptidase	gnl\|CDD\|132151	TIGR03107, Glutamyl_aminopeptidase, glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP020027.1\|WP_003053955.1\|106507_106903_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|180914	PRK07274, PRK07274, single-stranded DNA-binding protein; Provisional.	1.44411e-89
NZ_CP020027.1\|WP_168390471.1\|117375_118251_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	3.57205e-79

>NZ_CP020027.1|WP_076639393.1|109806_111300_-|helix-turn-helix-domain-containing-protein
MIEKYLESSIESKCQLIVLFFKTSYLPITEVAEKTGLTFLQLNHYCEELNAFFPGSLSMTIQKRMISCQFTHPFKETYLYQLYASSNVLQLLAFLIKNGSHSRPLTDFARSHFLSNSSAYRMREALIPLLRNFELKLSKNKIVGEEYRIRYLIALLYSKFGIKVYDLTQQDKNTIHSFLSHSSTHLKTSPWLSESFSFYDILLALSWKRHQFSVTIPQTRIFQQLKKLFVYDSLKKSSRDIIETYCQLNFSAGDLDYLYLIYITADNSFASLQWTPEHIRQCCQLFEENDTFRLLLNPIITLLPNLKEQKASLVKALMFFSKSFLFNLQHFIPETNLFVSPYYKGNQKLYTSLKLIVEEWMAKLPGKRYLNHKHFHLFCHYVEQILRNIQSPLVVVFVASNFINAHLLTDSFPRYFSDKSIDFHSYYLLQDNVYQIPNLKPDLVITHSQLIPFVHHELTKGIAVAEISFDESILSIQELMYQVKEEKFQADLTKQLT
>NZ_CP020027.1|WP_002986499.1|108787_109660_-|Hsp33-family-molecular-chaperone-HslO
MDKIIKSIAQSGAFRAYVLDSTETVALAQEKHNTLSSSTVALGRTLIANQILAANQKGDSKITVKVIGDSSFGHIISVADTKGHVKGYIQNTGVDIKKTATGEVLVGPFMGNGHFVTIIDYGTGNPYTSTTPLITGEIGEDFAYYLTESEQTPSAIGLNVLLDENDKVKVAGGFMVQVLPGASEEEIARYEKRLQEMPAISHLLASKNHVDALLEAIYGDEPYKRLSEEPLSFQCDCSRERFEAALMTLPKADLQAMIDEDKGAEIVCQFCGTKYQFNESDLEALINDKA
>NZ_CP020027.1|WP_076639394.1|107823_108801_-|tRNA-dihydrouridine-synthase-DusB
MIKLNSSFRIGDVEIPHRTVLAPMAGVTNSAFRTIAKEFGAGLVVMEMISEKGLLYNNEKTLHMLHIDENEHPMSIQLFGGDAEGLKRAADFIQTNTKADIVDINMGCPVNKVVKNEAGAKWLRDPDKIYHIVKEVTSVLDIPLTVKMRTGWADSSLAVENALAAESAGVSALAMHGRTREQMYTGTCDHETLARVSKAITKIPFIGNGDVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHFFETGQELADLPFAKKLDIAKDHLKRLINLKGETIAVREFRGLAPHYLRGTAGAAKVRGAVSRAESLAEVEAIFETVR
>NZ_CP020027.1|WP_076639395.1|107162_107804_-|deoxynucleoside-kinase
MLIVLAGTIGAGKSSLAAALGEHLGTDVFYEAIDNNPVLDLYYQDPKKYAFLLQIYFLNKRFKSIKEAYQADNNILDRSIFEDEFFLKLNYKNGNVTKTELDIYQELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQYYHQVHGEYPTWYEDYKVSPKMKIDGNSLDFVQNPQDLATVLKMIDTKLKELHLL
>NZ_CP020027.1|WP_003053955.1|106507_106903_+|single-stranded-DNA-binding-protein
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF
>NZ_CP020027.1|WP_002986511.1|105730_106357_+|DUF4479-and-tRNA-binding-domain-containing-protein
MIFAYNKEQVGDVLMVILQDTKDIKRQVERKGKVARVFAEESGKTLAWNIFEASSLITIEGNGQIFLTDEDLARLNAELAKEGFSERLEPTVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIVAGAPNAALGLKTIVALPGAIMPNGSLIFPGKLRGEESYGMMCSPRELALPNAPQKRGIIELDESAVVGEAFDPAKHWKG
>NZ_CP020027.1|WP_002986515.1|105395_105713_+|thioredoxin-family-protein
MIRPTSYESLAALIEKEDKLVLFFTADWCPDCQFIYPIMPEIEAELTDMTFVCVNRDQFIEVAQKWDIFGIPSFVVIEKGQEVGRLVNKMRKTKTEIMHFLAAYQ
>NZ_CP020027.1|WP_002986518.1|105105_105399_+|DUF4651-domain-containing-protein
MRDMSKKKIGMISGIFGFSLAIGLGIVIKDYCQDRQRRQMTRDLRTFFSPLGQIEVLYINPCQVKQDYISGGVVMSNGKQYQFTYHSRQISFEEDKG
>NZ_CP020027.1|WP_012560390.1|103582_104650_-|glutamyl-aminopeptidase
MTDLFSKIKEVTELDGIAGYEHSVRDYLRTKITPLVDRVETDGLGGIFGIRDSKAEKAPRILVAAHMDEVGFMVSDIKVDGTLRVVGIGGWNPLVVSSQRFTLYTRTGQVIPLISGSVPPHFLRGANGSASLPHIEDIVFDGGFTDKAEAERFGITPGDIIVPQSETILTANQKNIISKAWDNRYGVLMITEMLEALKGQDLNNTLIAGANVQEEVGLRGAHVSTTKFDPELFFAVDCSPAGDIYGNPGTIGDGTLLRFYDPGHVMLKDMRDFLLTTAEDAGVNFQYYCGKGGTDAGAAHLQNGGVPSTTIGVCARYIHSHQTLYAMDDFVEAQAFLQAIIKKLDRSTVDLIKRY
>NZ_CP020027.1|WP_076639397.1|102764_103535_-|pyrroline-5-carboxylate-reductase
MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLTLPYAMSHQDLIDQVDLVILGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDINEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGMPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELERLGLTATVSSAIDKTIDKAKSL
>NZ_CP020027.1|WP_076639390.1|114685_116383_+|SpaH/EbpB-family-LPXTG-anchored-major-pilin
MKLSKKLSKKLLYSAMAFTMLTSATVAPVAQIIPSSTVRAETLQDRTQKTIPEATEVVITKLQADDYNDDVKPNGKANENGLPINNLGELGRNVKPLSDVTFVAYKIPEGIAEEKVKELKTKQTVVDVENYLNAQNLKIEKTVLTKTDGNGQTTFTVQKSSYGKYFVVEDMTATGTPETISKAYAVPFTLELPISASDGTGYLTKVNIYPKNVTSSLPKPGKDVKELGLNHSSYNIGERFSWFLKGTVPKNMLDYEKYSFTDTLDSQLDFISVKSVKYGSQILEKNNDYTLSEPTAQNRTLKVELTEAGIKKVAGLYPDRQEVLDTEIEAIKENTDQKPFLEVEFETNINSTVILGKPVTNEVKIEFDNKPDKIAKPVTTPPSDNPEVHTGGKRFVKVAAGNDATKLGGAEFDLLTEANQPINWTAELIRANNKSEYIVGTPQEGQPVKLKSDTDGSFEIKGLAYAIDAEATGAGVKYKLKETKAPAGYVIPEAPIEFAVNQTSYNKTPTTIDVDKADAEPQKVENNKRPEIPNTGGIGTAIFVVLGIVLMVVATKGMRSHKEEN
>NZ_CP020027.1|WP_076639389.1|116465_117398_+|LPXTG-cell-wall-anchor-domain-containing-protein
MQKLLKYLCSFGVVLGLLLGFPGQVLAQGDQAQLTVVHLESRDVDRPNPQLDLAPSAGKPVEGITYRLYQLKLGREAQPISYWEKLTLQALEEQAQTVFEAKTDAQGHAAFLQLPIGIYYGVAVENQQRQAGIAGFLVDLTGDTGYVKTVYPKVIWPTGGLHLIKYGVDGQTKVPLAGVRFELYEDNGFKPLRVKDGLHSYDLDAKTTLITNQEGQLKVAGLLAGNYYLKEVATAKGYRLKTDAISFQVQAHQTKTVSVDNQKEPPPPVTPWDWIPRTGEAQALTLIVLGLILMLLALFYYQKHRQEGND
>NZ_CP020027.1|WP_168390471.1|117375_118251_+|class-C-sortase
MVKRATISMETSKKKVELRVWLSRLVFLAGFLVLAFPIVSQVLYYQASRADINAFKQAVTKIDRTEIKRRLELARAYNASLSGGTNQTTKPVLKDPYSDHQKKAGRAEYSRMLEVREQIGHVTIPKINQDLPIYAGSGEENLQRGVGHLEGTSLPIGGPSTHAVLTAHRGLPTARLFTDLDKMRRGDRFYIEHLGGKLAYQVDSIKVITPDRLDELYLVPDKDYMTLLTCTPYMINSHRLLVRGKRIPYKESLKQKDQQIGQRHQLATYGFIALGLTLVLGLLWYRKRQKK
>NZ_CP020027.1|WP_076639387.1|118264_119122_+|class-C-sortase
MKQKVNQLYQLIATNKLRSVLFILGILVVLFPIVSQASYYLASHQQINQFEHKAAVIDRSAIERRISLAKAYNDAISRHPSLSDPFTSKEKAGLREYARMLEVNEQIGHVAIPKIGVDLPIYAGTSAAILEKGSGHLEGTSLPIGGKTTYAVLTAHRGLPTARLFTDLDKVKKGDYFYVTNLKGTLAYQVDRIMVIEPSQLDAVSIEEGKDYVTLLTCTPYMINSHRLLVRGVRVPLTSRQAKKESLTAVRPYQYYRWLVYLAIAVLIILVMIVAKYYQKTNKSS
>NZ_CP020027.1|WP_172841104.1|119191_124324_+|fibrinogen-binding-adhesin-SdrG-C-terminal-domain-containing-protein
MTNKTLHKVLVKLAAVLAILFLVLPTGLTAVTVLAEQINTENLIPVETAAGEILKESDLDFEQAIPTSGEALKDSSASWIQLTYNKVNQNLAKQDLFLRLPQGMTIEGIGQDQKLDVKTISVPKDLDLDEAASTINNTNIITGFEKIGEQDYKLSFAATSKTLNLVFKVKGTSLNEKRELQLSDKQNLNQTSFTKILGLGIAKSDDRTSANDTTTRPSIQPRAATARETTGNQDISANLTTSNAQLNLEDKDKNNIYDVEAPDSFMFRATLSLLDSRYIVPGNYFELKLSDTIHYNMLNPTDINFPYLTQDGKVIAVPELVQDPPVDGLLRATGKIVRYRFTDQVQGLDSLTMTLNLGHSVNPNVVQNNDKYDFSYQIGGHIIKQSYDVQYGKPKENGNLNVHQRLTYTDSKQNLKASSLIYVNPKQTPQYAGKQTLSILRNPKTYTISEQTVPNLLELNNQTSIKVYKLKDSKGVTDAVNLDKQYLEEVINPIITKSDGKIEVSFNYTQGETSAYVVAVETSLQQEGSQPVFIAQNSNLTSASTRKKVSETDATATVGSGGSASGDQTPKGTLYLNKVDTNHKHLANATFTLSGNTTAGQFLYRTLITDTKEVSFSDLPPGSYLLKETTAPSGYQQITTPWTVTVDDKGKVTVTGNEADTQKVPEEAEVVILWESTKWNYGNVQFYKDRFKELVDSVGNQNAKYTLIRYSGDTSDSAQVINQSVSSAEFNKILNSETLTASTMTNRKGMLKAYQLALQQFQASTNKRKYLLQLTNYPIYPGYREEKDFMSQSQTSFDAMKSLGVVPYLLVERDPYANRNTYLDPKAEASSFGAFYPSDNIKVVWSNNSSGLFTPPTNTNYTIQIQSIGSAIKQQIPESVLTVINRASGKFSINKIDEAKKGLAGATFTLSKRTTVAVNHQVQGAFTPVSKETTAGRTTLTFDNLKPGVYDLKETKAPNAYVLDPKTYVVVVQNSGKTTIVDEANFKEADYPMADNTSQFDYPTKDIANKPNKIVFTKIGDGGKSLSGAEFELRKGNEKVQTTKSKDDGQVTFTKLLPGTYEVWETKVADSAYQLPKEAVATFEVKADGTFSEPMGRLFKKNSQQNNRYEIRNDLINKKTGNQKIKVIKKDELTEVPLPNAKFQLEASDGTIYTKTTDVKGEIVFEKLPYGQYILTEIEAPTGYVLDKTPQKINITEVSALETEVVAGRDATQPTVAPAARAALAAPVAEPVTGKNVSDQISIKELDITSSNEATPHNVRPNHGENIVMRADFTIKPGSDIKAGDFFTLTLPNTIDPFGVSAPENVDFRILGPLGTLALGTYDPSTHTITYKFTDYITRYAVSSFSTISPFFIDRYTVKTNQKIDLFLKIGQVSSDLYHFTVDYNPYYGIMDTDNPVNIGSIITRLNQDTGDFVNYVYINPAGQSLLDSTFTLTGNGSTILDNSTKVQVFEVNYPNIQMPPSWGIDDSSLTETNRYYINKQDGKISINFYNDLYLEKSYIVKISGKSDLTNNEPVHTSATLTQRRYISSAYWTHTGRYIPSGPYTETFTYNAGVLKRSGESNADGSVVVRLSNRKNYIDFMKSNSQGTPLEATFELRKKATNDMVTVGTPVISDKTTGKFYFEGLPPGDYEVWETKAPDGYTKPVEAVATFKVTDEGEIVDKSLEDGRIINYKRPELPATGGPGIFVYLFIGSSLCLVAFFWNRSSRFTR
>NZ_CP020027.1|WP_076639385.1|124500_125166_-|hypothetical-protein
MKRCNKYLFTSLLAASMLFSSYKSVHAHDNIDENGKVHLYWQGNYYVDNYVDYTKALVDSNNSIEWTVTFNSAKEQWVYPDFSVFLPKGVKAPKEITYEHHYWDGTVHSEKHNNTQWHYDWENQKTNFNQEFDKFPGYTGWSRSLDKFYKLKNDGKFSHVLVDTYGRQSHTYFSHKMVWKFKTELEEDYKNKWDKLPFIAGIKQNNPLAASFPSYKGEFGE
>NZ_CP020027.1|WP_161237316.1|125425_126832_+|short-chain-fatty-acid-transporter
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLATGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLSGAAVLYSATPDYLRNSVADAYKQVVPESVPLTGSVLNLPFISLLVVCMLVPLCFALLAHPKDETKIMELDDEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNSFNFLFLGLGLLLCGQQGPEYYGSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDLGKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF
>NZ_CP020027.1|WP_002986463.1|126899_127811_-|LysR-family-transcriptional-regulator
MNISSLAYFIEIVNCDFNLTKAAQKSHISQPALSSYIKTIEKEEGVVLFQRQKGRLVGLTSVGERFFENAKVVIASHEQLMADLRSESKKYKGEISIGIPQLISGIVFSELIPKLIEENPEVKFHIVETGAYELQKKLFLKEVDFAILLTPTTLDATIADIDILLRDQLCLYMSHKTFQETFDSNPNISIKALHRQNLVTFDKTFMINHQLTTLFEEANSLPVVKCYSASWDFLLNCTRYSSYLTILPRPITHFAHMDGLVEVQLTEHPKWEVVLASLKHNKTSHLKHYIKHTILDYFTNQRF
>NZ_CP020027.1|WP_076639384.1|127931_129116_+|acetyl-CoA-C-acetyltransferase
MTKEVVITSAYRTPIGNFGGVFKSLSAVDLGVTVVTKILADTGLKSDAIDEVIFGNVLHAGLGQNVARQVALNAGLSYDTPAFTIDMVCGSGLKAVELGAQKIQTGNADIVLVGGTENMSQAPYVLQGQRWGSRMGDSKVVDTMLKDGLSDAFAGYHMGITAENIVQQYGLTREEQDAFAADSQRKAQLAIEKGRFKEEIAPVTIPQRKGEPLLIDQDEYPKFGTTVDKLAKLRPAFIKDEGTVTAGNASGINDGAAAILLMSKEKAEELGLPILAKITSYASAGVDPSIMGCGPIPATKKALAKAQLTIDDIDLIEANEAFAAQALAVSRDLGFDNEKVNVNGGAIALGHPIGASGARILVTLLVEMAKRDVRHGLATLCIGGGQGQSIIVTR
>NZ_CP020027.1|WP_002986455.1|129127_129787_+|CoA-transferase-subunit-A
MKENKRIAIAEAISHIKDGDTIMVGGFMANGTPEALIDALVDKGTKDLTLICNDAGFVDRGVGKMVANHQFKTIYATHIGLNKEAGRQMTAGETTIELIPQGTFAEKIRIGAYGIGGFYTPTGVGTLVAEGKETKTIKGKTYLLEYPFEADVALIFANKADEMGNLQYSGSENNFNQLMAACAKTTIVQAREIVPVGTIQPECVHTPHIFVDYIVKEGV

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Crispr_ID: NZ_CP020027_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020027_2

990951-991052

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020027_2

>merge|NZ_CP020027|2|990951-991052|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>NZ_CP020027|2|2|990951-991052|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACAGTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020027.1\|WP_020905236.1\|987167_987797_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP020027.1\|WP_002989605.1\|1001153_1001774_+\|DUF3862-domain-containing-protein	unknown	unknown	gnl\|CDD\|289729
NZ_CP020027.1\|WP_002989626.1\|988554_988890_-\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NZ_CP020027.1\|WP_076639672.1\|1002030_1004295_-\|glycogen/starch/alpha-glucan-family-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP020027.1\|WP_002989617.1\|997803_998175_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP020027.1\|WP_031488251.1\|979278_981597_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP020027.1\|WP_002989607.1\|999798_1000413_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP020027.1\|WP_002992417.1\|987806_988448_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP020027.1\|WP_002984444.1\|993415_994429_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_CP020027.1\|WP_002984437.1\|998174_998873_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP020027.1\|WP_031488247.1\|986315_987152_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
NZ_CP020027.1\|WP_002984469.1\|978667_978916_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP020027.1\|WP_031488249.1\|983567_984803_+\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP020027.1\|WP_032460380.1\|982125_983448_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NZ_CP020027.1\|WP_002984451.1\|989085_990900_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP020027.1\|WP_002984449.1\|991075_991633_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP020027.1\|WP_031488246.1\|994508_997619_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
NZ_CP020027.1\|WP_002984433.1\|998882_999668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020027.1\|WP_076639671.1\|991850_993353_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP020027.1\|WP_031488248.1\|985172_985946_-\|CAMP-factor-pore-forming-toxin-Cfa	unknown	unknown	gnl\|CDD\|369335

Protein	Function_ID	Function_description	E-value
NZ_CP020027.1\|WP_020905236.1\|987167_987797_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	6.31636e-109
NZ_CP020027.1\|WP_002989605.1\|1001153_1001774_+\|DUF3862-domain-containing-protein	gnl\|CDD\|289729	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862). Structure 3D4E shared structural similarity to beta-lactamase inhibitory proteins (BLIP) which already include 1XXM, 1S0W, 1JTG, 2G2U, 2G2W, 2B5R, and 3due. All of structures are involved in beta-lactamase inhibitor complex. (REF http://www.topsan.org/Proteins/JCSG/3d4e).	6.81674e-87
NZ_CP020027.1\|WP_002989626.1\|988554_988890_-\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	2.02984e-64
NZ_CP020027.1\|WP_076639672.1\|1002030_1004295_-\|glycogen/starch/alpha-glucan-family-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP020027.1\|WP_002989617.1\|997803_998175_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
NZ_CP020027.1\|WP_031488251.1\|979278_981597_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP020027.1\|WP_002989607.1\|999798_1000413_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
NZ_CP020027.1\|WP_002992417.1\|987806_988448_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.99371e-71
NZ_CP020027.1\|WP_002984444.1\|993415_994429_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_CP020027.1\|WP_002984437.1\|998174_998873_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
NZ_CP020027.1\|WP_031488247.1\|986315_987152_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.49546e-109
NZ_CP020027.1\|WP_002984469.1\|978667_978916_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
NZ_CP020027.1\|WP_031488249.1\|983567_984803_+\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.31574e-95
NZ_CP020027.1\|WP_032460380.1\|982125_983448_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NZ_CP020027.1\|WP_002984451.1\|989085_990900_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP020027.1\|WP_002984449.1\|991075_991633_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
NZ_CP020027.1\|WP_031488246.1\|994508_997619_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
NZ_CP020027.1\|WP_076639671.1\|991850_993353_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP020027.1\|WP_031488248.1\|985172_985946_-\|CAMP-factor-pore-forming-toxin-Cfa	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	3.90909e-97

>NZ_CP020027.1|WP_002984451.1|989085_990900_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSRESTYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLTTTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>NZ_CP020027.1|WP_002989626.1|988554_988890_-|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVVKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>NZ_CP020027.1|WP_002992417.1|987806_988448_-|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>NZ_CP020027.1|WP_020905236.1|987167_987797_-|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQNVDAKEKALDLLTRLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>NZ_CP020027.1|WP_031488247.1|986315_987152_-|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQDKVAFTDSYMRNEQIIVVKKRSDIKTISDMKHKVLGAQSASSGYDALLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQSGKFQAISEKWFGDDVATANIKS
>NZ_CP020027.1|WP_031488248.1|985172_985946_-|CAMP-factor-pore-forming-toxin-Cfa
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTVLMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATINKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDMGFAITKLVIRIIDPFASVDAIKVQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKPFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>NZ_CP020027.1|WP_031488249.1|983567_984803_+|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLSLSVAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMIPEEEIFDNVAKNLYRYEKLILSKVPDYDHYIAKSFQLIDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHPTHYRIVKM
>NZ_CP020027.1|WP_032460380.1|982125_983448_+|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFTGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFILMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>NZ_CP020027.1|WP_031488251.1|979278_981597_-|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPFGSNSSAEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>NZ_CP020027.1|WP_002984469.1|978667_978916_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN
>NZ_CP020027.1|WP_002984449.1|991075_991633_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>NZ_CP020027.1|WP_076639671.1|991850_993353_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRVDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>NZ_CP020027.1|WP_002984444.1|993415_994429_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>NZ_CP020027.1|WP_031488246.1|994508_997619_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELTDCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQELTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDCFEPNRKKIMDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>NZ_CP020027.1|WP_002989617.1|997803_998175_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>NZ_CP020027.1|WP_002984437.1|998174_998873_+|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>NZ_CP020027.1|WP_002984433.1|998882_999668_+|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNINELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHSHIFNINTSADSFPFTEQKTIYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>NZ_CP020027.1|WP_002989607.1|999798_1000413_-|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>NZ_CP020027.1|WP_002989605.1|1001153_1001774_+|DUF3862-domain-containing-protein
MTKKHLLTLLLISFFTSFLVACSTTKDKEPQPSDSEIITPRLHQAAHQDKRANFEKIKLATVDSSFTGGTSLEELISLFGEPSQHDPKTAGEVTIDAYTWQFDQVTLTVNLYQNSSIVKTISNFTFARELGLSQKEYQQLQKGMSYEDVKKILTEPDNYSQASSSDHQTLQAIWVSGLKTDTSGANISLVFENNQLTEMSQVGLEE
>NZ_CP020027.1|WP_076639672.1|1002030_1004295_-|glycogen/starch/alpha-glucan-family-phosphorylase
MTRFTEYVETKLGKSLTQASNEEIYLSLLNFVKEEASHKAKNSAKRKVYYISAEFLIGKLLSNNLINLGIYKDIKEELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSISSLGINGEGVGLNYHCGLFKQVFKHNEQEAEPNYWIEDQSWLVPTNISYDVPFKNFTLKSRLDRIDVLGYKRDTKNYLNLFDIEGVDYGLIKDGISFDKTQIAKNLTLFLYPDDSDKNGELLRIYQQYFMVSNAAQLIIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHGFDFDEAVAVVKNMVGYTNHTILAEALEKWPTAYLNEVVPHLVTIIEKLDALVRSEVSDPAVQIIDESGRVHMAHMDIHFATSVNGVAALHTEILKNSELKAFYDLYPEKFNNKTNGITFRRWLEFANQDLADYIKELIGDEYLTDATKLEKLMVFADDKAVHAKLAEIKFNNKLALKRYLKDNKDIELDEHSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITVIFGGKAAPAYIIAQDIIHLILCLSELINNDPEVSPYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTGNMKFMLNGALTLGTMDGANVEIAELAGMENIYTFGKDSDTIINLYATASYVAKDYYDNHPAIKAAVNFIISPELLAFGNEERLDRLYKELISKDWFMTLIDLEEYIEVKEKMLADYEDQDLWMTKVVHNIAKAGFFSSDRTIEQYNEDIWHSR

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Crispr_ID: NZ_CP020027_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020027_3

1241761-1241989

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRISPRCasFinder
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRT
TTTCAATCCACTCACCCATGAAGGGTGAGAC	PILER-CR

3 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP020027_3

>merge|NZ_CP020027|3|1241761-1241989|CRISPRCasFinder,CRT,PILER-CR
CTTTCAATCCACTCACCCATGAAGGGTGAGACGCTGACTTTGATGTCGGTGCAGAACACGTTGGAATTTCAATCCACTCACCCATGAAGGGTGAGACGAAAAACATGCTGCGACTAAAAAATACGTAGATATTTCAATCCACTCACCCATGAAGGGTGAGACTCTCCATGCTCTTAATTCTTCAATTTTCTTTGTTCATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NZ_CP020027|3|3|1241761-1241989|CRISPRCasFinder
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTGACTTTGATGTCGGTGCAGAACACGTTGGA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GAAAAACATGCTGCGACTAAAAAATACGTAGAT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TCTCCATGCTCTTAATTCTTCAATTTTCTTTGTTC
ATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NZ_CP020027|3|1|1241761-1241989|CRT
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTGACTTTGATGTCGGTGCAGAACACGTTGGA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GAAAAACATGCTGCGACTAAAAAATACGTAGAT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TCTCCATGCTCTTAATTCTTCAATTTTCTTTGTTC
ATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NZ_CP020027|3|1|1241762-1241989|PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTGACTTTGATGTCGGTGCAGAACACGTTGGAA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	GAAAAACATGCTGCGACTAAAAAATACGTAGATA
TTTCAATCCACTCACCCATGAAGGGTGAGAC	TCTCCATGCTCTTAATTCTTCAATTTTCTTTGTTCA
TTTCAATCCACTCACCCATGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020027.1\|WP_002994841.1\|1240890_1241601_-\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NZ_CP020027.1\|WP_076639344.1\|1239105_1240212_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NZ_CP020027.1\|WP_076639349.1\|1250310_1252959_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP020027.1\|WP_076639348.1\|1247748_1250157_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP020027.1\|WP_011888719.1\|1252960_1253524_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379082
NZ_CP020027.1\|WP_031488520.1\|1242441_1243467_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP020027.1\|WP_023610925.1\|1238277_1239018_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_CP020027.1\|WP_002989056.1\|1234025_1234499_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_CP020027.1\|WP_002983795.1\|1233203_1233884_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP020027.1\|WP_076639316.1\|1236547_1238281_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP020027.1\|WP_076639314.1\|1234665_1235382_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
NZ_CP020027.1\|WP_076639346.1\|1242137_1242431_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
NZ_CP020027.1\|WP_094751267.1\|1244992_1246888_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NZ_CP020027.1\|WP_003060901.1\|1243463_1244138_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
NZ_CP020027.1\|WP_015057910.1\|1244139_1244988_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP020027.1\|WP_002983803.1\|1231694_1232930_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NZ_CP020027.1\|WP_076639350.1\|1254125_1254521_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181104
NZ_CP020027.1\|WP_076639315.1\|1235395_1236475_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP020027.1\|WP_010922512.1\|1246887_1247616_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP020027.1\|WP_076639345.1\|1240254_1240878_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264

Protein	Function_ID	Function_description	E-value
NZ_CP020027.1\|WP_002994841.1\|1240890_1241601_-\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	4.54755e-43
NZ_CP020027.1\|WP_076639344.1\|1239105_1240212_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	7.41609e-163
NZ_CP020027.1\|WP_076639349.1\|1250310_1252959_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP020027.1\|WP_076639348.1\|1247748_1250157_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.90158e-158
NZ_CP020027.1\|WP_011888719.1\|1252960_1253524_-\|AAA-family-ATPase	gnl\|CDD\|379082	pfam13238, AAA_18, AAA domain.	0.00452424
NZ_CP020027.1\|WP_031488520.1\|1242441_1243467_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP020027.1\|WP_023610925.1\|1238277_1239018_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	4.18348e-83
NZ_CP020027.1\|WP_002989056.1\|1234025_1234499_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.68589e-66
NZ_CP020027.1\|WP_002983795.1\|1233203_1233884_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40
NZ_CP020027.1\|WP_076639316.1\|1236547_1238281_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.34045e-64
NZ_CP020027.1\|WP_076639314.1\|1234665_1235382_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.07888e-105
NZ_CP020027.1\|WP_076639346.1\|1242137_1242431_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.02794e-33
NZ_CP020027.1\|WP_094751267.1\|1244992_1246888_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
NZ_CP020027.1\|WP_003060901.1\|1243463_1244138_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	1.18604e-43
NZ_CP020027.1\|WP_015057910.1\|1244139_1244988_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	2.68212e-160
NZ_CP020027.1\|WP_002983803.1\|1231694_1232930_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_CP020027.1\|WP_076639350.1\|1254125_1254521_-\|hypothetical-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000210941
NZ_CP020027.1\|WP_076639315.1\|1235395_1236475_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.89837e-33
NZ_CP020027.1\|WP_010922512.1\|1246887_1247616_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.32713e-117
NZ_CP020027.1\|WP_076639345.1\|1240254_1240878_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.70169e-35

>NZ_CP020027.1|WP_002994841.1|1240890_1241601_-|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFGKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHMLLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>NZ_CP020027.1|WP_076639345.1|1240254_1240878_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDKMSTSKDKSMMADKSSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSTCLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFKKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>NZ_CP020027.1|WP_076639344.1|1239105_1240212_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKVIYLAGGCFWAVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVTYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEDYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKEKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVIRYKEDKSFNMTRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>NZ_CP020027.1|WP_023610925.1|1238277_1239018_-|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKEHAPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLELSKKTETIQELVEQPQKEVSAIAMAIHERLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>NZ_CP020027.1|WP_076639316.1|1236547_1238281_-|sensor-histidine-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETTSVLAKNTEIQAFASQIHQENDKQVLQLMEMVLATNSDLQTAVLVTKDGRTVSTNSQLTMKTSSDMMAEPWYKAAIDRQAMPVLTPARQLSLSSKKEWVVSVTQEVVDAAGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHQVQRQIFWSFLGTGLLACLICGFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLAQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLVLTVWDNGKGIEDSSLTNSQSLLTRGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>NZ_CP020027.1|WP_076639315.1|1235395_1236475_-|MmcQ/YjbR-family-DNA-binding-protein
MSLATDYFSRQTPIVEKLMAYGFEKRDNGYFYNERFMEGEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVVCFEATPFQSIQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDLPQLLQQEGIYPAYHMSKKNWISIILDDKITDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYMTAPVKSIRYVCQVLETDIPNEGYRKNPNIDKLMRLRKCQQYEDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>NZ_CP020027.1|WP_076639314.1|1234665_1235382_-|B3/4-domain-containing-protein
MVEFVADQSFWELFPGAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPAGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNPTLPNELCYKDDIGAVCRCLNWRDGERTMATEHTKNAFLIIEALDQEGQNRLQEALKFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>NZ_CP020027.1|WP_002989056.1|1234025_1234499_+|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>NZ_CP020027.1|WP_002983795.1|1233203_1233884_-|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>NZ_CP020027.1|WP_002983803.1|1231694_1232930_-|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>NZ_CP020027.1|WP_076639346.1|1242137_1242431_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSTRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>NZ_CP020027.1|WP_031488520.1|1242441_1243467_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILMTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>NZ_CP020027.1|WP_003060901.1|1243463_1244138_-|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>NZ_CP020027.1|WP_015057910.1|1244139_1244988_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLERRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLVSLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVEILEGL
>NZ_CP020027.1|WP_094751267.1|1244992_1246888_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRNNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFSYYSAEMGQTQYDSFHKQLNNWIDYCEEGDVKKFLTFVQQFILKPEFLTLILDSLIAPDYQHNQLKVTYFDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLEIETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>NZ_CP020027.1|WP_010922512.1|1246887_1247616_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPATKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>NZ_CP020027.1|WP_076639348.1|1247748_1250157_-|CRISPR-associated-helicase/endonuclease-Cas3
MRMILAHYDCKKDKKQSLDEHLWHVACSSRQEASIIGQGDVLFLIGLYHDLGKADRTFQDKLLNNPNRHVDHSYAGAKYLYSIIGPRLKNRGVDKNERMTFNEMVGYVISAHHGMYDLCYYFDDAEYYGFNKFKNRINRDLDGYHYHEDIKGYALKLEKKLCDYGYKDLRELIDKAFDNYQQAMSSLNWQDKSEWDYYQSCMVRLYLSLLKNADILDTVNAYGLKISPMDKTERSFLKHSYLAAIEQKYASFGQPNNQLNTIRTEIAERVKERGKRDSNGIYRLDLPTGAGKTNLSMRYAFHQLVHHDKSRFFYITPFLSVLEQNASEIRKVTGDLGVLEHHSNVVKQANEDDDDKESLLSAYLSDSWDSQVVLTSMVQFFQTLFKTKSANLRRFSSLINSVVILDEVQSLPIEVTTLFNLTMNFLNKVMDTTIVLCTATQPAYDSSEIDHRICYGGNLGELAEIVELTIEERQIFSRTELRKFDDSDQKVHLTDVINLILGEENSVLAIFNTKKTVHNCYTMLKDMTDRPVYQLSTNMCAQHRLDLIAKIKTELQNNIPIICISTQLIEAGVDVDFHRVIRSYSGIDSIVQAAGRCNREGKRDKGQVTLVNLTNEEENVSRLTEIKAKKEATESILHKIGSPIDISTLNRDFFEYYYANNQGLMDYPLEDNLSIYDYLSLNIYQTANKKFKGKLKQAFKTAGAKMNLINNDMIGILVPYGEAEKKLAYLEELGMSHFLSAEDYQTIKSLLKELQPFTVNVRENDPLFETTKSYLNGQILVLTSEYYDTERGVKYDSASFYF
>NZ_CP020027.1|WP_076639349.1|1250310_1252959_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGQGITRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKHVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEEAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRSAFENEAAHKGVESLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFNSNINYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVVQKEKDKQADYQAKYDATQERIAEMKKIKS
>NZ_CP020027.1|WP_011888719.1|1252960_1253524_-|AAA-family-ATPase
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLKRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTHLTAAETAQLIIQKMTHIKEN
>NZ_CP020027.1|WP_076639350.1|1254125_1254521_-|hypothetical-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKGSQTVEKLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448946	Streptococcus phage Javan456, complete genome	37158-37190	0	1.0
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448942	Streptococcus phage Javan448, complete genome	19074-19106	0	1.0
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448964	Streptococcus phage Javan502, complete genome	27931-27963	0	1.0
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448772	Streptococcus phage Javan483, complete genome	33441-33473	0	1.0
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448766	Streptococcus phage Javan465, complete genome	33553-33585	0	1.0
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448954	Streptococcus phage Javan476, complete genome	32464-32496	0	1.0
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	NC_028700	Streptococcus phage T12, complete genome	7363-7397	0	1.0
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448793	Streptococcus phage Javan523, complete genome	7686-7720	0	1.0
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448950	Streptococcus phage Javan464, complete genome	7409-7443	0	1.0
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448960	Streptococcus phage Javan492, complete genome	7400-7434	1	0.971
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448762	Streptococcus phage Javan447, complete genome	7526-7560	1	0.971
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448795	Streptococcus phage Javan527, complete genome	13083-13117	1	0.971
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448954	Streptococcus phage Javan476, complete genome	7481-7515	1	0.971
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448946	Streptococcus phage Javan456, complete genome	37158-37191	1	0.971
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448942	Streptococcus phage Javan448, complete genome	19074-19107	1	0.971
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448964	Streptococcus phage Javan502, complete genome	27931-27964	1	0.971
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448772	Streptococcus phage Javan483, complete genome	33441-33474	1	0.971
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448766	Streptococcus phage Javan465, complete genome	33553-33586	1	0.971
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448954	Streptococcus phage Javan476, complete genome	32464-32497	1	0.971
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	NC_028700	Streptococcus phage T12, complete genome	7362-7397	1	0.972
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448793	Streptococcus phage Javan523, complete genome	7685-7720	1	0.972
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448950	Streptococcus phage Javan464, complete genome	7408-7443	1	0.972
NZ_CP020027_3	3.1\|1241793\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241793-1241825	33	MK448791	Streptococcus phage Javan517, complete genome	14016-14048	2	0.939
NZ_CP020027_3	3.1\|1241793\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241793-1241825	33	NC_004587	Streptococcus prophage 315.4, complete genome	14111-14143	2	0.939
NZ_CP020027_3	3.1\|1241793\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241793-1241825	33	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	15381-15413	2	0.939
NZ_CP020027_3	3.1\|1241793\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241793-1241825	33	MK448977	Streptococcus phage Javan530, complete genome	14016-14048	2	0.939
NZ_CP020027_3	3.1\|1241793\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241793-1241825	33	MK448793	Streptococcus phage Javan523, complete genome	15458-15490	2	0.939
NZ_CP020027_3	3.1\|1241793\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241793-1241825	33	MK448788	Streptococcus phage Javan511, complete genome	14016-14048	2	0.939
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448793	Streptococcus phage Javan523, complete genome	34080-34112	2	0.939
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448790	Streptococcus phage Javan515, complete genome	7813-7847	2	0.943
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448793	Streptococcus phage Javan523, complete genome	34080-34113	2	0.941
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448960	Streptococcus phage Javan492, complete genome	7399-7434	2	0.944
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448762	Streptococcus phage Javan447, complete genome	7525-7560	2	0.944
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448795	Streptococcus phage Javan527, complete genome	13082-13117	2	0.944
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448954	Streptococcus phage Javan476, complete genome	7480-7515	2	0.944
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448763	Streptococcus phage Javan451, complete genome	28155-28187	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448777	Streptococcus phage Javan491, complete genome	28026-28058	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448767	Streptococcus phage Javan467, complete genome	28118-28150	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448771	Streptococcus phage Javan481, complete genome	27640-27672	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	28223-28255	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448779	Streptococcus phage Javan497, complete genome	32393-32425	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448792	Streptococcus phage Javan521, complete genome	32644-32676	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448943	Streptococcus phage Javan450, complete genome	28118-28150	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448972	Streptococcus phage Javan520, complete genome	28296-28328	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448968	Streptococcus phage Javan512, complete genome	32393-32425	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	M19348	Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds	1163-1195	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	NC_004584	Streptococcus prophage 315.1, complete genome	32237-32269	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448786	Streptococcus phage Javan509, complete genome	28118-28150	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448774	Streptococcus phage Javan487, complete genome	26475-26507	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448962	Streptococcus phage Javan496, complete genome	23793-23825	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448773	Streptococcus phage Javan485, complete genome	29247-29279	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448797	Streptococcus phage Javan531, complete genome	32393-32425	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448770	Streptococcus phage Javan477, complete genome	32644-32676	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448978	Streptococcus phage Javan532, complete genome	32131-32163	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448785	Streptococcus phage Javan507, complete genome	32132-32164	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448950	Streptococcus phage Javan464, complete genome	33336-33368	3	0.909
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	NC_004589	Streptococcus prophage 315.6, complete genome	32490-32522	3	0.909
NZ_CP020027_3	3.4\|1241793\|34\|NZ_CP020027\|PILER-CR	1241793-1241826	34	MK448791	Streptococcus phage Javan517, complete genome	14016-14049	3	0.912
NZ_CP020027_3	3.4\|1241793\|34\|NZ_CP020027\|PILER-CR	1241793-1241826	34	NC_004587	Streptococcus prophage 315.4, complete genome	14111-14144	3	0.912
NZ_CP020027_3	3.4\|1241793\|34\|NZ_CP020027\|PILER-CR	1241793-1241826	34	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	15381-15414	3	0.912
NZ_CP020027_3	3.4\|1241793\|34\|NZ_CP020027\|PILER-CR	1241793-1241826	34	MK448977	Streptococcus phage Javan530, complete genome	14016-14049	3	0.912
NZ_CP020027_3	3.4\|1241793\|34\|NZ_CP020027\|PILER-CR	1241793-1241826	34	MK448793	Streptococcus phage Javan523, complete genome	15458-15491	3	0.912
NZ_CP020027_3	3.4\|1241793\|34\|NZ_CP020027\|PILER-CR	1241793-1241826	34	MK448788	Streptococcus phage Javan511, complete genome	14016-14049	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448779	Streptococcus phage Javan497, complete genome	32393-32426	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448792	Streptococcus phage Javan521, complete genome	32644-32677	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448968	Streptococcus phage Javan512, complete genome	32393-32426	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	NC_004584	Streptococcus prophage 315.1, complete genome	32237-32270	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448962	Streptococcus phage Javan496, complete genome	23793-23826	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448797	Streptococcus phage Javan531, complete genome	32393-32426	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448770	Streptococcus phage Javan477, complete genome	32644-32677	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448978	Streptococcus phage Javan532, complete genome	32131-32164	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448785	Streptococcus phage Javan507, complete genome	32132-32165	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448950	Streptococcus phage Javan464, complete genome	33336-33369	3	0.912
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	NC_004589	Streptococcus prophage 315.6, complete genome	32490-32523	3	0.912
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448790	Streptococcus phage Javan515, complete genome	7812-7847	3	0.917
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448795	Streptococcus phage Javan527, complete genome	39171-39203	4	0.879
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MK448944	Streptococcus phage Javan452, complete genome	36205-36237	4	0.879
NZ_CP020027_3	3.3\|1241923\|35\|NZ_CP020027\|CRISPRCasFinder,CRT	1241923-1241957	35	MK448933	Streptococcus phage Javan420, complete genome	8681-8715	4	0.886
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448763	Streptococcus phage Javan451, complete genome	28155-28188	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448777	Streptococcus phage Javan491, complete genome	28026-28059	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448767	Streptococcus phage Javan467, complete genome	28118-28151	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448771	Streptococcus phage Javan481, complete genome	27640-27673	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	28223-28256	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448943	Streptococcus phage Javan450, complete genome	28118-28151	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448972	Streptococcus phage Javan520, complete genome	28296-28329	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	M19348	Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds	1163-1196	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448786	Streptococcus phage Javan509, complete genome	28118-28151	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448774	Streptococcus phage Javan487, complete genome	26475-26508	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448773	Streptococcus phage Javan485, complete genome	29247-29280	4	0.882
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448795	Streptococcus phage Javan527, complete genome	39171-39204	5	0.853
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MK448944	Streptococcus phage Javan452, complete genome	36205-36238	5	0.853
NZ_CP020027_3	3.6\|1241923\|36\|NZ_CP020027\|PILER-CR	1241923-1241958	36	MK448933	Streptococcus phage Javan420, complete genome	8680-8715	5	0.861
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MT774404	CrAssphage cr114_1, complete genome	58153-58185	7	0.788
NZ_CP020027_3	3.2\|1241858\|33\|NZ_CP020027\|CRISPRCasFinder,CRT	1241858-1241890	33	MN582077	Podoviridae sp. ctLUJ1, complete genome	31322-31354	8	0.758
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MT774404	CrAssphage cr114_1, complete genome	58153-58186	8	0.765
NZ_CP020027_3	3.5\|1241858\|34\|NZ_CP020027\|PILER-CR	1241858-1241891	34	MN582077	Podoviridae sp. ctLUJ1, complete genome	31322-31355	9	0.735

1. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagat	Protospacer
*********************************

2. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagat	Protospacer
*********************************

3. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagat	Protospacer
*********************************

4. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagat	Protospacer
*********************************

5. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagat	Protospacer
*********************************

6. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagat	Protospacer
*********************************

7. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctcttaattcttcaattttctttgttc	Protospacer
***********************************

8. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctcttaattcttcaattttctttgttc	Protospacer
***********************************

9. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctcttaattcttcaattttctttgttc	Protospacer
***********************************

10. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 1, identity: 0.971

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttc	Protospacer
************.**********************

11. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 1, identity: 0.971

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttc	Protospacer
************.**********************

12. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 1, identity: 0.971

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttc	Protospacer
************.**********************

13. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 1, identity: 0.971

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttc	Protospacer
************.**********************

14. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448946 (Streptococcus phage Javan456, complete genome) position: , mismatch: 1, identity: 0.971

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagatg	Protospacer
*********************************.

15. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 1, identity: 0.971

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagatg	Protospacer
*********************************.

16. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 1, identity: 0.971

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagatg	Protospacer
*********************************.

17. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 1, identity: 0.971

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagatg	Protospacer
*********************************.

18. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 1, identity: 0.971

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagatg	Protospacer
*********************************.

19. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 1, identity: 0.971

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaaaaatacgtagatg	Protospacer
*********************************.

20. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 1, identity: 0.972

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctcttaattcttcaattttctttgttcg	Protospacer
***********************************.

21. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 1, identity: 0.972

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctcttaattcttcaattttctttgttcg	Protospacer
***********************************.

22. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 1, identity: 0.972

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctcttaattcttcaattttctttgttcg	Protospacer
***********************************.

23. spacer 3.1|1241793|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 2, identity: 0.939

gctgactttgatgtcggtgcagaacacgttgga	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttaga	Protospacer
*****************.************.**

24. spacer 3.1|1241793|33|NZ_CP020027|CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 2, identity: 0.939

gctgactttgatgtcggtgcagaacacgttgga	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttaga	Protospacer
*****************.************.**

25. spacer 3.1|1241793|33|NZ_CP020027|CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 2, identity: 0.939

gctgactttgatgtcggtgcagaacacgttgga	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttaga	Protospacer
*****************.************.**

26. spacer 3.1|1241793|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 2, identity: 0.939

gctgactttgatgtcggtgcagaacacgttgga	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttaga	Protospacer
*****************.************.**

27. spacer 3.1|1241793|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.939

gctgactttgatgtcggtgcagaacacgttgga	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttaga	Protospacer
*****************.************.**

28. spacer 3.1|1241793|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 2, identity: 0.939

gctgactttgatgtcggtgcagaacacgttgga	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttaga	Protospacer
*****************.************.**

29. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.939

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gaaaaacatgctgcgactaaagattacgtagat	Protospacer
*********************.* *********

30. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 2, identity: 0.943

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
tctccacgctctcaattcttcaattttctttgttc	Protospacer
******.*****.**********************

31. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.941

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gaaaaacatgctgcgactaaagattacgtagata	Protospacer
*********************.* **********

32. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 2, identity: 0.944

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttcg	Protospacer
************.**********************.

33. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 2, identity: 0.944

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttcg	Protospacer
************.**********************.

34. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.944

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttcg	Protospacer
************.**********************.

35. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 2, identity: 0.944

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccatgctctcaattcttcaattttctttgttcg	Protospacer
************.**********************.

36. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
agcaaacatgctgcgactaaaaaatacgtagat	Protospacer
.. ******************************

37. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
agcaaacatgctgcgactaaaaaatacgtagat	Protospacer
.. ******************************

38. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

39. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

40. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

41. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

42. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

43. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

44. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

45. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

46. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to M19348 (Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

47. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

48. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

49. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

50. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

51. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

52. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

53. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

54. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

55. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

56. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

57. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 3, identity: 0.909

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagat	Protospacer
*.*******************.* *********

58. spacer 3.4|1241793|34|NZ_CP020027|PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 3, identity: 0.912

gctgactttgatgtcggtgcagaacacgttggaa	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttagag	Protospacer
*****************.************.**.

59. spacer 3.4|1241793|34|NZ_CP020027|PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 3, identity: 0.912

gctgactttgatgtcggtgcagaacacgttggaa	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttagag	Protospacer
*****************.************.**.

60. spacer 3.4|1241793|34|NZ_CP020027|PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 3, identity: 0.912

gctgactttgatgtcggtgcagaacacgttggaa	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttagag	Protospacer
*****************.************.**.

61. spacer 3.4|1241793|34|NZ_CP020027|PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 3, identity: 0.912

gctgactttgatgtcggtgcagaacacgttggaa	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttagag	Protospacer
*****************.************.**.

62. spacer 3.4|1241793|34|NZ_CP020027|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 3, identity: 0.912

gctgactttgatgtcggtgcagaacacgttggaa	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttagag	Protospacer
*****************.************.**.

63. spacer 3.4|1241793|34|NZ_CP020027|PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 3, identity: 0.912

gctgactttgatgtcggtgcagaacacgttggaa	CRISPR spacer
gctgactttgatgtcggcgcagaacacgttagag	Protospacer
*****************.************.**.

64. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

65. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

66. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

67. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

68. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

69. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

70. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

71. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

72. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

73. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

74. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 3, identity: 0.912

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagata	Protospacer
*.*******************.* **********

75. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 3, identity: 0.917

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
tctccacgctctcaattcttcaattttctttgttcg	Protospacer
******.*****.**********************.

76. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 4, identity: 0.879

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
aacgaacatgctgtgactaaaaaatacgtagat	Protospacer
.* .*********.*******************

77. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 4, identity: 0.879

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
aacgaacatgctgtgactaaaaaatacgtagat	Protospacer
.* .*********.*******************

78. spacer 3.3|1241923|35|NZ_CP020027|CRISPRCasFinder,CRT matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 4, identity: 0.886

tctccatgctcttaattcttcaattttctttgttc	CRISPR spacer
cctccatgctcttaattcttcaatcttctttttcc	Protospacer
.***********************.****** *.*

79. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
agcaaacatgctgcgactaaaaaatacgtagatg	Protospacer
.. ******************************.

80. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
agcaaacatgctgcgactaaaaaatacgtagatg	Protospacer
.. ******************************.

81. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

82. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

83. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

84. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

85. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

86. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to M19348 (Streptococcus pyogenes phage H4489A hyaluronidase (hylP) and hypothetical protein genes, complete cds) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

87. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

88. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

89. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 4, identity: 0.882

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
ggaaaacatgctgcgactaaagattacgtagatg	Protospacer
*.*******************.* *********.

90. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 5, identity: 0.853

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
aacgaacatgctgtgactaaaaaatacgtagatg	Protospacer
.* .*********.*******************.

91. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 5, identity: 0.853

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
aacgaacatgctgtgactaaaaaatacgtagatg	Protospacer
.* .*********.*******************.

92. spacer 3.6|1241923|36|NZ_CP020027|PILER-CR matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 5, identity: 0.861

tctccatgctcttaattcttcaattttctttgttca	CRISPR spacer
cctccatgctcttaattcttcaatcttctttttccg	Protospacer
.***********************.****** *.*.

93. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MT774404 (CrAssphage cr114_1, complete genome) position: , mismatch: 7, identity: 0.788

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
aagtataatcctgctactaaaaaatacgtagat	Protospacer
.*. *  ** **** ******************

94. spacer 3.2|1241858|33|NZ_CP020027|CRISPRCasFinder,CRT matches to MN582077 (Podoviridae sp. ctLUJ1, complete genome) position: , mismatch: 8, identity: 0.758

gaaaaacatgctgcgactaaaaaatacgtagat	CRISPR spacer
gtactcactgctgcgactaaaaaataaggagat	Protospacer
* *     ****************** * ****

95. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MT774404 (CrAssphage cr114_1, complete genome) position: , mismatch: 8, identity: 0.765

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
aagtataatcctgctactaaaaaatacgtagatg	Protospacer
.*. *  ** **** ******************.

96. spacer 3.5|1241858|34|NZ_CP020027|PILER-CR matches to MN582077 (Podoviridae sp. ctLUJ1, complete genome) position: , mismatch: 9, identity: 0.735

gaaaaacatgctgcgactaaaaaatacgtagata	CRISPR spacer
gtactcactgctgcgactaaaaaataaggagatg	Protospacer
* *     ****************** * ****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

30871 : 43258

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087486699.1\|30871_34597_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	9.2e-41	27.4
WP_087486700.1\|34830_36285_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.3e-54	33.5
WP_032464121.1\|36312_37335_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	4.0e-63	41.4
WP_002986700.1\|37502_38057_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
WP_076639719.1\|38240_39788_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	4.4e-45	52.4
WP_076639718.1\|39845_40970_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	7.7e-07	28.6
WP_076639717.1\|41222_42488_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_002986689.1\|42766_43258_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.9e-18	42.3

DBSCAN-SWA_2

607037 : 614437

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044559748.1\|607037_609248_-	LTA synthase family protein	W6LM83	Streptococcus_phage	6.5e-268	68.9
WP_002985142.1\|609355_610519_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
WP_002985140.1\|610515_611202_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_076639328.1\|611295_612462_+	chorismate synthase	A0A291AU41	Pandoravirus	1.9e-32	32.2
WP_002990260.1\|612522_612864_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	2.6e-19	41.1
WP_044559750.1\|613084_614437_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-30	23.8

DBSCAN-SWA_3

709464 : 760957

Streptococcus_pyogenes_phage(47.37%)

tRNA,tail,integrase,holin,terminase,portal,capsid

attL 710044:710059|attR 765209:765224

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002990117.1\|709464_710364_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
710044:710059	attL	NA	NA	NA	NA
WP_030127486.1\|710436_711675_+	GTPase HflX	NA	NA	NA	NA
WP_002990114.1\|711667_712303_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_023611152.1\|712317_713247_+	ribonuclease Z	NA	NA	NA	NA
WP_002984893.1\|713246_714011_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_076639688.1\|714007_716218_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.9e-71	30.2
WP_002990109.1\|716367_716886_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-30	42.4
WP_002984890.1\|716966_717650_+	DnaD domain-containing protein	Q938N2	Temperate_phage	2.9e-09	36.8
WP_002990106.1\|717646_718303_+	endonuclease III	NA	NA	NA	NA
WP_020905114.1\|718374_719061_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_002984887.1\|719050_719839_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_076639687.1\|719878_720985_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_002992970.1\|721042_721912_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.4e-101	64.6
WP_002990099.1\|721911_722505_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
WP_076639686.1\|722748_723789_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	8.5e-69	43.9
WP_011528538.1\|723871_725011_-\|integrase	site-specific integrase	A1EAB7	Streptococcus_phage	4.4e-119	55.8
WP_011528539.1\|725132_725819_-	hypothetical protein	A0A1P8VVT3	Streptococcus_phage	5.7e-122	100.0
WP_011054825.1\|725989_726142_-	hypothetical protein	A0A1P8VVQ0	Streptococcus_phage	5.2e-20	100.0
WP_011054824.1\|726152_726530_-	ImmA/IrrE family metallo-endopeptidase	A0A1P8VVK5	Streptococcus_phage	4.0e-69	100.0
WP_011528540.1\|726513_726873_-	helix-turn-helix transcriptional regulator	A0A1P8VVN3	Streptococcus_phage	1.8e-58	98.3
WP_009881062.1\|727061_727280_+	helix-turn-helix transcriptional regulator	A0A1P8VVR5	Streptococcus_phage	4.1e-34	100.0
WP_011528542.1\|727374_727626_+	hypothetical protein	A0A1P8VVV6	Streptococcus_phage	2.8e-42	100.0
WP_011528544.1\|727806_728121_+	helix-turn-helix transcriptional regulator	A0A1P8VVN6	Streptococcus_phage	1.7e-52	100.0
WP_011528545.1\|728347_728830_+	siphovirus Gp157 family protein	A0A1P8VVS5	Streptococcus_phage	1.2e-78	100.0
WP_002995975.1\|728830_729511_+	AAA family ATPase	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
WP_011528546.1\|729612_730842_+	DEAD/DEAH box helicase	A0A1P8VVM2	Streptococcus_phage	3.3e-237	100.0
WP_002995969.1\|730857_731316_+	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	3.8e-82	100.0
WP_030126642.1\|731318_732131_+	bifunctional DNA primase/polymerase	A0A1P8VVM6	Streptococcus_phage	5.5e-156	99.6
WP_020905118.1\|732120_733602_+	DNA primase	A0A1P8VVM0	Streptococcus_phage	1.3e-296	100.0
WP_002995960.1\|733846_734167_+	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	2.0e-53	100.0
WP_011018138.1\|734150_734507_+	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	5.0e-61	100.0
WP_011017568.1\|734748_735033_+	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	7.0e-50	100.0
WP_002987593.1\|735029_735299_+	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
WP_011054753.1\|735308_735713_+	hypothetical protein	Q938M1	Temperate_phage	6.0e-71	100.0
WP_011054752.1\|735709_735880_+	hypothetical protein	Q938M0	Temperate_phage	4.2e-26	100.0
WP_011054751.1\|735876_736383_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	9.8e-95	100.0
WP_164997036.1\|736379_736550_+	hypothetical protein	A0A097PAS8	Streptococcus_pyogenes_phage	1.1e-26	98.2
WP_011017866.1\|736823_737264_+	ArpU family transcriptional regulator	Q938L8	Temperate_phage	5.0e-79	100.0
WP_011285571.1\|737411_737792_+	hypothetical protein	A0A097PAR5	Streptococcus_pyogenes_phage	1.0e-64	100.0
WP_021299302.1\|737781_739056_+\|terminase	PBSX family phage terminase large subunit	A0A097PAV9	Streptococcus_pyogenes_phage	1.9e-251	99.8
WP_011528552.1\|739055_740381_+\|portal	phage portal protein	A0A097PAT2	Streptococcus_pyogenes_phage	6.3e-234	95.6
WP_011528553.1\|740349_741258_+\|capsid	minor capsid protein	A0A097PBF2	Streptococcus_pyogenes_phage	2.4e-83	94.5
WP_011528554.1\|741264_741495_+	hypothetical protein	Q938K9	Temperate_phage	4.0e-19	62.5
WP_021299309.1\|741606_742176_+	DUF4355 domain-containing protein	A0A097PAW3	Streptococcus_pyogenes_phage	1.4e-60	90.5
WP_009880261.1\|742194_743085_+	hypothetical protein	A0A097PAW2	Streptococcus_pyogenes_phage	8.6e-86	99.4
WP_011528557.1\|743096_743390_+	Rho termination factor N-terminal domain-containing protein	A0A097PBF3	Streptococcus_pyogenes_phage	1.3e-46	99.0
WP_011528558.1\|743403_743748_+	hypothetical protein	A0A097PAS2	Streptococcus_pyogenes_phage	1.5e-54	99.1
WP_011528559.1\|743744_744056_+	hypothetical protein	A0A097PAW7	Streptococcus_pyogenes_phage	4.6e-47	94.2
WP_011528560.1\|744052_744448_+	hypothetical protein	A0A097PAT9	Streptococcus_pyogenes_phage	1.8e-56	93.0
WP_011528561.1\|744449_744860_+	DUF5072 family protein	A0A097PAW5	Streptococcus_pyogenes_phage	1.8e-70	99.3
WP_079890482.1\|744871_745378_+\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	8.3e-78	98.7
WP_011528563.1\|745390_745708_+	hypothetical protein	A0A097PAS6	Streptococcus_pyogenes_phage	1.9e-51	98.1
WP_011528564.1\|745680_746139_+	hypothetical protein	A0A097PAX1	Streptococcus_pyogenes_phage	7.0e-76	93.4
WP_011528565.1\|746131_747937_+\|tail	tail protein	A0A097PAU2	Streptococcus_pyogenes_phage	9.1e-252	95.5
WP_011528566.1\|747937_749422_+\|tail	phage tail family protein	A0A097PAW9	Streptococcus_pyogenes_phage	1.8e-290	98.8
WP_050336170.1\|749422_752872_+\|tail	phage tail protein	A0A097PBF5	Streptococcus_pyogenes_phage	0.0e+00	99.0
WP_011528568.1\|752876_754739_+	hypothetical protein	A0A097PAT0	Streptococcus_pyogenes_phage	0.0e+00	99.8
WP_009880247.1\|754749_755097_+	DUF1366 domain-containing protein	A0A097PAX5	Streptococcus_pyogenes_phage	3.5e-59	100.0
WP_015055952.1\|755246_755570_+	hypothetical protein	A0A097PAX2	Streptococcus_pyogenes_phage	7.7e-53	100.0
WP_011054798.1\|755569_755902_+\|holin	phage holin	A0A097PBF6	Streptococcus_pyogenes_phage	5.7e-51	100.0
WP_011054797.1\|755903_756668_+	CHAP domain-containing protein	A0A097PAT3	Streptococcus_pyogenes_phage	1.5e-150	100.0
WP_011054796.1\|756679_757282_+	hypothetical protein	A0A097PAX9	Streptococcus_pyogenes_phage	7.8e-91	98.8
WP_011528569.1\|757292_758066_+	hypothetical protein	A0A097PAV0	Streptococcus_pyogenes_phage	4.6e-128	94.6
WP_009880241.1\|758075_758297_+	hypothetical protein	A0A097PAX7	Streptococcus_pyogenes_phage	2.5e-18	84.5
WP_011528570.1\|758296_758956_+	hypothetical protein	A0A097PBF7	Streptococcus_pyogenes_phage	6.3e-118	96.3
WP_011017966.1\|759024_759459_-	hypothetical protein	NA	NA	NA	NA
WP_011285611.1\|759730_760531_-	streptodornase Sda3	NA	NA	NA	NA
WP_011528571.1\|760768_760957_+	hypothetical protein	A3F673	Streptococcus_phage	6.1e-18	73.3
765209:765224	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1097413 : 1203242

116

Streptococcus_phage(47.14%)

tRNA,head,tail,integrase,protease,terminase,portal,capsid

attL 1138495:1138514|attR 1180946:1180965

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011184658.1\|1097413_1098109_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_020905286.1\|1098127_1098889_-	DUF3169 family protein	NA	NA	NA	NA
WP_002989220.1\|1098885_1099101_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_076639299.1\|1099461_1102080_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.1e-61	34.1
WP_020905289.1\|1102466_1103522_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_002989211.1\|1103584_1104292_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.6e-08	27.2
WP_002995765.1\|1104357_1105554_-	OFA family MFS transporter	NA	NA	NA	NA
WP_011054652.1\|1105929_1107735_-	oligoendopeptidase F	NA	NA	NA	NA
WP_002983995.1\|1107747_1108710_-	competence protein CoiA	NA	NA	NA	NA
WP_020905292.1\|1109005_1109722_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_009880651.1\|1109840_1110545_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_076639300.1\|1110746_1111775_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_002983986.1\|1111781_1113002_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_020905297.1\|1113689_1113938_-	hypothetical protein	NA	NA	NA	NA
WP_020905298.1\|1113992_1114148_-	hypothetical protein	NA	NA	NA	NA
WP_020905299.1\|1114309_1114915_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	3.9e-58	52.7
WP_020905300.1\|1115011_1116052_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_076639301.1\|1116122_1118366_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	7.5e-54	58.2
WP_002983967.1\|1118346_1119009_-	ComEA family DNA-binding protein	NA	NA	NA	NA
WP_011054661.1\|1119208_1119949_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_020905303.1\|1119988_1120843_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_011017953.1\|1120832_1121111_+	GIY-YIG nuclease family protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
WP_020905304.1\|1121134_1123135_-	potassium transporter Kup	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	3.4e-66	34.0
WP_020905305.1\|1123262_1124882_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-59	36.5
WP_020905306.1\|1125188_1126733_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.1e-35	28.8
WP_011017956.1\|1126980_1127676_-	TIGR02206 family membrane protein	NA	NA	NA	NA
WP_076639302.1\|1127755_1129147_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_020905307.1\|1129345_1130392_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_002983939.1\|1130492_1131089_-	recombination protein RecR	NA	NA	NA	NA
WP_076639303.1\|1131887_1132667_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_002989140.1\|1132790_1133333_-	hypothetical protein	NA	NA	NA	NA
WP_002983930.1\|1133493_1134015_-	transcription repressor NadR	NA	NA	NA	NA
WP_002983928.1\|1134121_1134817_-	phosphoglycerate mutase	NA	NA	NA	NA
WP_023610138.1\|1135055_1135991_+	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	3.0e-65	44.8
WP_076639304.1\|1136290_1138153_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.9e-90	34.0
1138495:1138514	attL	NA	NA	NA	NA
WP_032463717.1\|1138683_1138866_-	hypothetical protein	A3F673	Streptococcus_phage	4.4e-21	81.7
WP_021340779.1\|1138980_1139769_-	streptococcal pyrogenic exotoxin SpeL	Q938J1	Temperate_phage	9.1e-47	41.4
WP_032463716.1\|1140050_1140764_-	streptococcal pyrogenic exotoxin SpeM	Q938J1	Temperate_phage	9.0e-78	59.1
WP_003051628.1\|1141147_1141741_-	GNAT family N-acetyltransferase	A0A0A8WFI2	Clostridium_phage	2.4e-23	38.2
WP_011018107.1\|1141740_1141944_-	hypothetical protein	NA	NA	NA	NA
WP_002994484.1\|1142807_1143500_-	AP2 domain-containing protein	A0A2H4J2S8	uncultured_Caudovirales_phage	1.5e-32	34.2
WP_023078271.1\|1143732_1144290_-	glycoside hydrolase family 73 protein	Q938J4	Temperate_phage	2.8e-95	89.2
WP_011054731.1\|1144400_1144586_-	hypothetical protein	Q938J5	Temperate_phage	1.7e-25	100.0
WP_023078532.1\|1144582_1144879_-	hypothetical protein	Q938J6	Temperate_phage	2.9e-46	99.0
WP_023611372.1\|1144889_1145522_-	hypothetical protein	Q938J7	Temperate_phage	2.6e-44	50.0
WP_032463718.1\|1145524_1145953_-	DUF1617 family protein	Q938J8	Temperate_phage	9.8e-64	89.3
WP_076639305.1\|1145964_1147851_-	gp58-like family protein	Q938J9	Temperate_phage	8.1e-219	84.9
WP_032463712.1\|1147865_1148879_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	1.6e-181	98.2
WP_094751265.1\|1148878_1150756_-\|tail	phage tail protein	A1EAB2	Streptococcus_phage	1.4e-114	48.7
WP_030127447.1\|1150752_1151523_-\|tail	phage tail family protein	A1EAB1	Streptococcus_phage	1.2e-56	45.0
WP_157727830.1\|1151522_1154270_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	8.3e-55	36.4
WP_030127445.1\|1154269_1154587_-	hypothetical protein	A1EAF6	Streptococcus_phage	6.9e-14	44.4
WP_030127444.1\|1154607_1154976_-	hypothetical protein	NA	NA	NA	NA
WP_030127443.1\|1155029_1155548_-\|tail	phage major tail protein, TP901-1 family	A1EAF4	Streptococcus_phage	2.2e-41	51.7
WP_030127442.1\|1155535_1155934_-	DUF3168 domain-containing protein	A1EAF3	Streptococcus_phage	3.8e-25	44.5
WP_030127441.1\|1155930_1156287_-	HK97 gp10 family phage protein	A1EAF2	Streptococcus_phage	4.7e-19	44.0
WP_032463711.1\|1156286_1156583_-	hypothetical protein	A0A1P8BKV3	Lactococcus_phage	9.6e-10	35.6
WP_030127439.1\|1156579_1156933_-\|head,tail	phage head-tail connector protein	A0A2H4J002	uncultured_Caudovirales_phage	3.9e-26	52.1
WP_030127438.1\|1156944_1157211_-	hypothetical protein	NA	NA	NA	NA
WP_030127437.1\|1157222_1158272_-\|capsid	major capsid protein	A0A286QR01	Streptococcus_phage	1.8e-106	57.7
WP_002990036.1\|1158274_1158655_-	structural protein	A0A0K2CNR0	Brevibacillus_phage	6.4e-06	36.3
WP_030127436.1\|1158664_1159198_-	DUF4355 domain-containing protein	A0A141E0S7	Streptococcus_phage	1.8e-14	82.5
WP_030127435.1\|1159341_1159608_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	4.1e-28	77.3
WP_032463710.1\|1159623_1160538_-\|capsid	minor capsid protein	A1EAE3	Streptococcus_phage	2.2e-73	50.0
WP_032461297.1\|1160518_1162009_-\|portal	phage portal protein	C9W9H5	Streptococcus_virus	1.3e-142	54.0
WP_014635515.1\|1162020_1163328_-\|terminase	PBSX family phage terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	2.9e-183	75.0
WP_030127432.1\|1163305_1163758_-\|terminase	terminase small subunit	A7J290	Streptococcus_phage	1.7e-66	95.7
WP_011054881.1\|1163847_1164264_-	transcriptional regulator	A7J289	Streptococcus_phage	3.3e-72	99.3
WP_023079210.1\|1164247_1164394_-	hypothetical protein	NA	NA	NA	NA
WP_011054882.1\|1164396_1164669_-	hypothetical protein	A7J287	Streptococcus_phage	5.7e-25	73.3
WP_164972002.1\|1164661_1164832_-	hypothetical protein	A7J285	Streptococcus_phage	9.0e-21	92.3
WP_030127431.1\|1164832_1166155_-	DEAD/DEAH box helicase family protein	A7J284	Streptococcus_phage	4.3e-251	97.5
WP_011054885.1\|1166151_1166427_-	VRR-NUC domain-containing protein	A7J283	Streptococcus_phage	2.9e-45	96.7
WP_032463709.1\|1166812_1169197_-	DNA primase	A7J282	Streptococcus_phage	6.3e-277	94.6
WP_030127429.1\|1169201_1171124_-	DNA polymerase	A7J280	Streptococcus_phage	0.0e+00	99.1
WP_086934854.1\|1171166_1171730_-	DUF2815 family protein	D2J040	Enterococcus_phage	3.3e-51	58.5
WP_011888943.1\|1171738_1172896_-	DUF2800 domain-containing protein	A7J278	Streptococcus_phage	1.0e-216	98.2
WP_030127427.1\|1172895_1173195_-	hypothetical protein	A7J277	Streptococcus_phage	3.7e-41	96.0
WP_030127426.1\|1173282_1173486_-	hypothetical protein	A7J276	Streptococcus_phage	3.7e-29	89.6
WP_017647437.1\|1173482_1173635_-	hypothetical protein	A7J275	Streptococcus_phage	9.9e-19	98.0
WP_030127425.1\|1173631_1174018_-	hypothetical protein	A7J274	Streptococcus_phage	6.8e-56	87.4
WP_030127424.1\|1174014_1174218_-	hypothetical protein	NA	NA	NA	NA
WP_023611037.1\|1174210_1174381_-	hypothetical protein	A7J273	Streptococcus_phage	2.9e-19	87.5
WP_014411880.1\|1174382_1174694_-	hypothetical protein	A0A1S5SA25	Streptococcus_phage	1.4e-43	78.6
WP_011054585.1\|1174771_1174957_-	helix-turn-helix transcriptional regulator	A0A1X9I6I3	Streptococcus_phage	3.3e-16	72.1
WP_011284879.1\|1175123_1175363_+	hypothetical protein	NA	NA	NA	NA
WP_002984292.1\|1175512_1175722_+	hypothetical protein	NA	NA	NA	NA
WP_001157159.1\|1175967_1176174_-	helix-turn-helix domain-containing protein	A0A1X9I5S3	Streptococcus_phage	1.1e-17	64.7
WP_050429000.1\|1176223_1176730_+	hypothetical protein	NA	NA	NA	NA
WP_021340823.1\|1176726_1176873_-	hypothetical protein	NA	NA	NA	NA
WP_030127422.1\|1176927_1177527_+	hypothetical protein	A0A097PAT4	Streptococcus_pyogenes_phage	9.1e-108	99.5
WP_076636802.1\|1177557_1177716_-	hypothetical protein	A0A097PAP2	Streptococcus_pyogenes_phage	1.1e-23	98.1
WP_030127421.1\|1178105_1178864_+	helix-turn-helix domain-containing protein	A0A097PBE5	Streptococcus_pyogenes_phage	3.1e-84	65.9
WP_030127420.1\|1178898_1179579_+	hypothetical protein	A0A097PAS7	Streptococcus_pyogenes_phage	1.2e-74	87.7
WP_003051793.1\|1179715_1180858_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
WP_002983920.1\|1180947_1181223_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.6e-25	73.0
1180946:1180965	attR	NA	NA	NA	NA
WP_002989129.1\|1181321_1181909_-	YpmS family protein	NA	NA	NA	NA
WP_002992620.1\|1181886_1182729_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_161237429.1\|1182721_1183573_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	9.2e-13	35.7
WP_076639306.1\|1183788_1184703_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_076639307.1\|1184874_1186536_-	DNA repair protein RecN	NA	NA	NA	NA
WP_002983907.1\|1186556_1187027_-	arginine repressor	NA	NA	NA	NA
WP_011017996.1\|1187013_1187841_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_076639308.1\|1187833_1188706_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_002983901.1\|1188705_1188921_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_076639309.1\|1188898_1190239_-	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	6.3e-40	30.9
WP_010922486.1\|1190391_1191246_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.0e-39	39.8
WP_076639310.1\|1191453_1193148_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	4.5e-128	42.2
WP_023610117.1\|1193325_1194735_-	deoxyribodipyrimidine photo-lyase	A0A1V0SGL1	Hokovirus	8.8e-61	32.8
WP_010922488.1\|1194883_1195618_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-34	38.4
WP_011054708.1\|1195617_1196304_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_002983885.1\|1196430_1196661_-	YkuJ family protein	NA	NA	NA	NA
WP_002983882.1\|1196958_1199241_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2C9CYX3	Yersinia_phage	1.1e-124	39.6
WP_020905319.1\|1199368_1199824_+	NUDIX hydrolase	NA	NA	NA	NA
WP_002983878.1\|1199874_1200177_+	DUF1827 family protein	NA	NA	NA	NA
WP_076639311.1\|1200440_1203242_-\|tRNA	isoleucine--tRNA ligase	H2EEZ0	Moumouvirus	1.4e-70	27.0

DBSCAN-SWA_5

1421089 : 1518422

103

Temperate_phage(49.25%)

tRNA,tail,holin,integrase,terminase,portal,transposase,capsid

attL 1473626:1473643|attR 1515498:1515515

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011054945.1\|1421089_1422529_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_076639439.1\|1422528_1423995_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_012560907.1\|1423994_1424297_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_002983281.1\|1425290_1425845_-	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-24	38.5
WP_002983278.1\|1425991_1426774_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_010922605.1\|1426991_1428206_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_002992571.1\|1428436_1428889_+	universal stress protein	NA	NA	NA	NA
WP_002992572.1\|1429011_1430400_-	Cof-type HAD-IIB family hydrolase	A0A0H3UZF4	Geobacillus_virus	2.1e-22	37.1
WP_002983258.1\|1430471_1431437_+	asparaginase	NA	NA	NA	NA
WP_002988556.1\|1431785_1432490_-	ABC transporter permease	NA	NA	NA	NA
WP_002991995.1\|1432502_1433405_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.9e-38	44.2
WP_076639441.1\|1433696_1435712_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_164997040.1\|1436086_1437541_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-13	31.6
WP_076639443.1\|1437477_1438158_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_076639444.1\|1438154_1438748_-	MptD family putative ECF transporter S component	NA	NA	NA	NA
WP_076639445.1\|1438744_1440415_-	ABC transporter ATP-binding protein	F2Y165	Organic_Lake_phycodnavirus	1.3e-18	29.1
WP_076639446.1\|1440407_1442171_-	ABC transporter ATP-binding protein/permease	F2Y1V5	Organic_Lake_phycodnavirus	1.7e-21	31.1
WP_076639447.1\|1442167_1443004_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-16	25.4
WP_053308222.1\|1443000_1444023_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-14	26.5
WP_011888625.1\|1444024_1444909_-	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA
WP_076639448.1\|1444892_1445768_-	heme-binding protein	NA	NA	NA	NA
WP_076639449.1\|1445964_1449792_-	NEAT domain-containing protein	NA	NA	NA	NA
WP_076639450.1\|1450281_1451793_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_038432480.1\|1451879_1452980_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	3.3e-31	31.0
WP_002983199.1\|1452976_1453333_-	holo-ACP synthase	NA	NA	NA	NA
WP_002988523.1\|1453448_1455968_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_014635671.1\|1456133_1457267_-\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_076639274.1\|1457427_1458381_-	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA
WP_011184899.1\|1458475_1459360_-	ROK family protein	NA	NA	NA	NA
WP_021775473.1\|1459623_1462635_-	hypothetical protein	NA	NA	NA	NA
WP_076639276.1\|1462865_1464749_-	PTS beta-glucoside transporter subunit IIBCA	NA	NA	NA	NA
WP_023078683.1\|1464990_1466430_+	glycoside hydrolase family 32 protein	NA	NA	NA	NA
WP_002988504.1\|1466434_1467400_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	8.0e-21	27.7
WP_012560925.1\|1467540_1467993_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_002983163.1\|1467985_1468375_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002988496.1\|1468420_1468978_-	elongation factor P	NA	NA	NA	NA
WP_076639277.1\|1469073_1469535_-	competence protein ComE	F8WPT6	Bacillus_phage	1.3e-32	54.3
WP_076639278.1\|1469569_1470643_-	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	2.7e-17	32.8
WP_076639279.1\|1470758_1473587_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	8.5e-305	55.5
1473626:1473643	attL	NA	NA	NA	NA
WP_011184907.1\|1473812_1473995_-	hypothetical protein	A3F673	Streptococcus_phage	4.4e-21	83.3
WP_012767009.1\|1474232_1475216_+	DNA/RNA non-specific endonuclease	A7J2B8	Streptococcus_phage	9.2e-166	97.7
WP_094751269.1\|1475278_1476115_-	hypothetical protein	Q938J2	Temperate_phage	6.2e-54	47.7
WP_048327805.1\|1476118_1476661_-	DUF4065 domain-containing protein	Q938J3	Temperate_phage	5.4e-43	49.4
WP_094751270.1\|1476797_1477994_-	glucosaminidase domain-containing protein	A7J2B5	Streptococcus_phage	4.0e-195	81.2
WP_002988455.1\|1478105_1478561_-\|holin	phage holin family protein	A0A0M4R3G6	Streptococcus_phage	5.2e-63	81.5
WP_094751271.1\|1478576_1479182_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	4.6e-83	93.0
WP_020837375.1\|1479184_1479616_-	DUF1617 family protein	Q938J8	Temperate_phage	1.6e-66	92.3
WP_094751272.1\|1479627_1481517_-	gp58-like family protein	Q938J9	Temperate_phage	6.5e-192	77.4
WP_011284842.1\|1481527_1481857_-	hypothetical protein	NA	NA	NA	NA
WP_011284843.1\|1481843_1483058_-	hypothetical protein	A3F657	Streptococcus_phage	5.0e-44	49.5
WP_094751273.1\|1485197_1485914_-\|tail	phage tail family protein	Q938K2	Temperate_phage	7.2e-136	99.2
WP_020837651.1\|1485910_1489171_-	tape measure protein	Q938K3	Temperate_phage	0.0e+00	99.7
WP_094751274.1\|1489160_1489736_-	hypothetical protein	Q938K4	Temperate_phage	6.1e-93	88.1
WP_094751275.1\|1489744_1490179_-	hypothetical protein	Q938K5	Temperate_phage	6.7e-52	74.3
WP_002986816.1\|1490220_1490709_-	hypothetical protein	Q938K6	Temperate_phage	3.5e-73	86.9
WP_094751276.1\|1490708_1491107_-\|capsid	capsid protein	Q79S87	Temperate_phage	1.4e-67	93.9
WP_002986818.1\|1491103_1491460_-\|capsid	phage capsid protein	Q79S88	Temperate_phage	1.4e-60	95.8
WP_094751277.1\|1491459_1491792_-\|capsid	minor capsid protein	Q79S86	Temperate_phage	1.2e-53	89.1
WP_032467172.1\|1491781_1492183_-	hypothetical protein	Q938K7	Temperate_phage	2.5e-53	92.8
WP_063629400.1\|1492215_1492485_-	hypothetical protein	NA	NA	NA	NA
WP_063629401.1\|1492494_1493331_-\|capsid	N4-gp56 family major capsid protein	Q79S85	Temperate_phage	2.0e-137	94.1
WP_094751278.1\|1493334_1493949_-	hypothetical protein	Q938K8	Temperate_phage	4.5e-94	94.1
WP_094751279.1\|1494041_1494314_-	hypothetical protein	A0A1J1JCG1	Escherichia_phage	1.7e-24	59.6
WP_094751280.1\|1494310_1494580_-	hypothetical protein	Q938K9	Temperate_phage	1.1e-31	84.1
WP_094751281.1\|1494641_1494881_-	hypothetical protein	Q938L0	Temperate_phage	4.8e-36	98.7
WP_094751282.1\|1494852_1496331_-\|capsid	phage minor capsid protein	Q938L1	Temperate_phage	4.2e-263	94.9
WP_002986832.1\|1496335_1497838_-\|portal	phage portal protein	Q938L2	Temperate_phage	5.4e-282	100.0
WP_010922074.1\|1497851_1499063_-\|terminase	PBSX family phage terminase large subunit	Q938L3	Temperate_phage	3.7e-225	99.7
WP_011054747.1\|1499145_1499619_-	hypothetical protein	Q938L4	Temperate_phage	4.3e-76	99.4
WP_002986841.1\|1499669_1500047_-	ASCH domain-containing protein	Q938L5	Temperate_phage	1.7e-67	100.0
WP_076639321.1\|1500107_1500491_-	GNAT family N-acetyltransferase	B5SP24	Lactococcus_phage	3.9e-35	58.5
WP_011054748.1\|1501455_1501713_+	hypothetical protein	NA	NA	NA	NA
WP_021340586.1\|1502287_1502725_-	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	1.4e-76	99.3
WP_032460172.1\|1503089_1503383_-	hypothetical protein	A0A097PAR1	Streptococcus_pyogenes_phage	2.7e-49	99.0
WP_023077953.1\|1503430_1504195_-	site-specific DNA-methyltransferase	A0A1S5SE41	Streptococcus_phage	2.8e-133	91.9
WP_021733928.1\|1504669_1504954_-	hypothetical protein	A3F628	Streptococcus_phage	7.8e-33	79.8
WP_020837669.1\|1504950_1505364_-	hypothetical protein	Q938M1	Temperate_phage	4.9e-36	65.2
WP_093974539.1\|1505360_1505555_-	hypothetical protein	A3F626	Streptococcus_phage	2.6e-11	91.9
WP_009880272.1\|1505541_1505940_-	hypothetical protein	A0A286QMU6	Streptococcus_phage	6.6e-30	48.8
WP_009880273.1\|1506039_1506207_-	hypothetical protein	A0A1S5SEF3	Streptococcus_phage	6.0e-09	55.6
WP_094751285.1\|1506216_1507014_-	PD-(D/E)XK nuclease-like domain-containing protein	J7KGZ1	Streptococcus_phage	6.4e-125	81.5
WP_094751286.1\|1507010_1507940_-	recombinase RecT	M1NRN6	Streptococcus_phage	2.1e-90	68.3
WP_094751287.1\|1507942_1508272_-	hypothetical protein	J7KGX3	Streptococcus_phage	1.1e-46	86.2
WP_002988357.1\|1508327_1508534_-	hypothetical protein	NA	NA	NA	NA
WP_011017992.1\|1508542_1508683_-	hypothetical protein	NA	NA	NA	NA
WP_002986875.1\|1508688_1508901_-	hypothetical protein	Q938N1	Temperate_phage	5.4e-15	58.6
WP_172450154.1\|1508881_1509292_-	DnaD domain protein	Q938N2	Temperate_phage	1.3e-52	78.1
WP_002988344.1\|1509443_1509695_-	hypothetical protein	A0A141E1D1	Streptococcus_phage	7.4e-11	39.0
WP_002986881.1\|1509794_1509980_-	hypothetical protein	Q938N3	Temperate_phage	1.2e-23	95.1
WP_002988339.1\|1510008_1510266_-	hypothetical protein	NA	NA	NA	NA
WP_011054766.1\|1510511_1510766_-	hypothetical protein	NA	NA	NA	NA
WP_094751288.1\|1510754_1510955_+	KTSC domain-containing protein	A0A1S5S8T9	Streptococcus_phage	3.1e-20	70.8
WP_002986888.1\|1510951_1511101_-	hypothetical protein	Q938N4	Temperate_phage	1.8e-20	100.0
WP_002986890.1\|1511133_1511862_-	phage antirepressor KilAC domain-containing protein	Q938N5	Temperate_phage	3.4e-133	99.6
WP_002986891.1\|1511872_1512064_-	hypothetical protein	A7J270	Streptococcus_phage	1.2e-24	90.5
WP_094751289.1\|1512859_1513219_+	helix-turn-helix transcriptional regulator	Q938N6	Temperate_phage	1.1e-60	99.2
WP_002986894.1\|1513232_1513613_+	hypothetical protein	Q938N7	Temperate_phage	5.3e-69	100.0
WP_002986895.1\|1513623_1514145_+	hypothetical protein	Q938N8	Temperate_phage	2.3e-67	100.0
WP_094751290.1\|1514263_1515418_+\|integrase	site-specific integrase	Q938N9	Temperate_phage	3.8e-203	98.1
WP_002983147.1\|1515661_1516606_+	magnesium transporter CorA family protein	NA	NA	NA	NA
1515498:1515515	attR	NA	NA	NA	NA
WP_010922629.1\|1516738_1517395_+	DUF1129 domain-containing protein	NA	NA	NA	NA
WP_002983142.1\|1517527_1517767_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_023605268.1\|1517930_1518422_-	single-stranded DNA-binding protein	A0A286QNX2	Streptococcus_phage	1.3e-59	74.2

Anti-CRISPR protein detection

Acr_ID: NZ_CP020027.1|WP_003051628.1|1141147_1141741_-|GNAT-family-N-acetyltransferase

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP020027.1|WP_003051628.1|1141147_1141741_-|GNAT-family-N-acetyltransferase

1141147_1141741_-

197 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|89	0.46875	0.9695431472081218	0.9792746113989638

1097413-1203242

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information