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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021402 Bordetella pertussis strain H696 chromosome, complete genome 4 crisprs cas3,DinG,csa3,DEDDh 0 0 25 0

Results visualization

1. NZ_CP021402
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021402_1 363319-363412 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021402_2 926578-926672 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021402_3 3357362-3357471 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021402_4 3731843-3731927 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 143079 : 217423 56 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_2 520647 : 581837 56 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_3 587155 : 633352 53 uncultured_Caudovirales_phage(17.39%) terminase,tail,tRNA,transposase NA
DBSCAN-SWA_4 639518 : 693448 49 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_5 816037 : 884013 59 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_6 907191 : 977458 57 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_7 989676 : 1045401 45 uncultured_Mediterranean_phage(37.5%) holin,tRNA,transposase NA
DBSCAN-SWA_8 1080752 : 1146336 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_9 1308901 : 1375401 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_10 1403572 : 1442162 36 Emiliania_huxleyi_virus(14.29%) protease,transposase NA
DBSCAN-SWA_11 1844272 : 1909821 59 Lake_Baikal_phage(20.0%) protease,tRNA,transposase NA
DBSCAN-SWA_12 2226524 : 2287872 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_13 2308663 : 2379817 56 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_14 2464016 : 2515188 48 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_15 2613483 : 2658667 47 Geobacillus_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_16 2709070 : 2781940 59 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_17 2785083 : 2851894 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_18 2882280 : 2976317 90 Bacillus_virus(27.27%) transposase NA
DBSCAN-SWA_19 3306964 : 3360705 50 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_20 3366860 : 3426160 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_21 3441098 : 3499171 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_22 3508971 : 3580312 59 Paramecium_bursaria_Chlorella_virus(20.0%) tRNA,transposase NA
DBSCAN-SWA_23 3651182 : 3767901 105 Bacillus_phage(12.5%) protease,tRNA,transposase NA
DBSCAN-SWA_24 3808314 : 3876138 60 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_25 4002193 : 4067105 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage