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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021641 Alcaligenes faecalis strain JQ135 chromosome, complete genome 4 crisprs csa3,DEDDh,WYL,cas3,RT 1 8 4 0

Results visualization

1. NZ_CP021641
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021641_1 391118-391307 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021641_2 955246-955933 Orphan I-F
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021641_3 1380848-1380918 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021641_4 2035687-2035787 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 NZ_CP021641.1 391287-391310 0 1.0
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 NZ_CP021641.1 391294-391317 0 1.0
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 NZ_CP021641.1 391301-391324 0 1.0
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 NZ_CP021641.1 391308-391331 0 1.0

1. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to position: 391287-391310, mismatch: 0, identity: 1.0

acagcagacagcagacagcagaca	CRISPR spacer
acagcagacagcagacagcagaca	Protospacer
************************

2. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to position: 391294-391317, mismatch: 0, identity: 1.0

acagcagacagcagacagcagaca	CRISPR spacer
acagcagacagcagacagcagaca	Protospacer
************************

3. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to position: 391301-391324, mismatch: 0, identity: 1.0

acagcagacagcagacagcagaca	CRISPR spacer
acagcagacagcagacagcagaca	Protospacer
************************

4. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to position: 391308-391331, mismatch: 0, identity: 1.0

acagcagacagcagacagcagaca	CRISPR spacer
acagcagacagcagacagcagaca	Protospacer
************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 NZ_CP019064 Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence 76636-76659 1 0.958
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 NZ_CP019064 Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence 76643-76666 1 0.958
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NC_017858 Methylophaga frappieri strain JAM7 plasmid, complete sequence 3864-3895 3 0.906
NZ_CP021641_2 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955274-955305 32 JX681814 Burkholderia phage phiX216, complete genome 18628-18659 4 0.875
NZ_CP021641_2 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955274-955305 32 NC_010463 Enterobacteria phage Fels-2, complete genome 6119-6150 4 0.875
NZ_CP021641_2 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955274-955305 32 KT630647 Salmonella phage SEN8, complete genome 19740-19771 4 0.875
NZ_CP021641_2 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955274-955305 32 HM461982 Burkholderia phage KS14, complete genome 12448-12479 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP041049 Citrobacter sp. CF971 plasmid pBM527-3, complete sequence 15848-15879 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP022300 Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence 4169-4200 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_KX912255 Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence 615-646 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 LC486677 Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence 1443-1474 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 JN581942 Uncultured bacterium plasmid pHH2-227, complete sequence 462-493 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP023160 Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed1, complete sequence 33482-33513 4 0.875
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP017023 Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence 36726-36757 4 0.875
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 MN692991 Marine virus AFVG_117M48, complete genome 246-269 5 0.792
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 MN692991 Marine virus AFVG_117M48, complete genome 58947-58970 5 0.792
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 MN694137 Marine virus AFVG_250M241, complete genome 514-537 5 0.792
NZ_CP021641_1 1.2|391252|24|NZ_CP021641|CRISPRCasFinder 391252-391275 24 MN694137 Marine virus AFVG_250M241, complete genome 59277-59300 5 0.792
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 CP050279 Klebsiella pneumoniae strain 10553 plasmid unnamed4, complete sequence 71742-71773 5 0.844
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP030081 Enterobacter hormaechei strain 20710 plasmid pVIM-20710, complete sequence 27115-27146 5 0.844
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NC_008342 Nitrosomonas eutropha C91 plasmid p2, complete sequence 32852-32883 5 0.844
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_MG456577 Vibrio alginolyticus strain Vb1978 plasmid pVb1978, complete sequence 1340-1371 5 0.844
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP021021 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pE, complete sequence 14782-14813 6 0.812
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP046349 Citrobacter portucalensis strain FDAARGOS_738 plasmid unnamed2, complete sequence 23539-23570 6 0.812
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP021004 Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pE, complete sequence 26403-26434 6 0.812
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 733598-733629 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 725138-725169 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 628783-628814 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 694543-694574 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 627898-627929 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 627042-627073 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 627032-627063 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 628771-628802 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 628789-628820 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 628768-628799 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 733662-733693 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 733662-733693 7 0.781
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 733648-733679 7 0.781
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NC_018830 Bordetella parapertussis Bpp5 plasmid BPP5P1, complete sequence 3689-3720 7 0.781
NZ_CP021641_2 2.3|955394|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955394-955425 32 MH616791 Uncultured bacterium isolate ctbj14 plasmid p_ctbj14, complete genome 2947-2978 8 0.75
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NZ_CP013631 Rhizobium sp. N324 plasmid pRspN324a, complete sequence 103705-103736 9 0.719
NZ_CP021641_2 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955334-955365 32 NC_011368 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence 39936-39967 9 0.719
NZ_CP021641_2 2.4|955454|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955454-955485 32 MG945414 UNVERIFIED: Microviridae sp. isolate 4163-1801, complete genome 2247-2278 9 0.719
NZ_CP021641_2 2.4|955454|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955454-955485 32 MN901521 Halorubrum coriense virus Serpecor1, complete genome 11857-11888 9 0.719
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP041049 Citrobacter sp. CF971 plasmid pBM527-3, complete sequence 15897-15928 10 0.688
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_KX912255 Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence 566-597 10 0.688
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 LC486677 Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence 1394-1425 10 0.688
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_LT853887 Xanthomonas fragariae strain PD5205 plasmid pPD5205-21, complete sequence 1297-1328 10 0.688
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_CP016835 Xanthomonas fragariae isolate Fap29 plasmid pFap29-2, complete sequence 7236-7267 10 0.688
NZ_CP021641_2 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955514-955545 32 NZ_LT853881 Xanthomonas fragariae strain NBC2815 plasmid pNBC2815-21, complete sequence 1297-1328 10 0.688
NZ_CP021641_2 2.7|955634|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT 955634-955665 32 MT939241 Enterococcus phage 9183, complete genome 75970-76001 10 0.688
NZ_CP021641_2 2.11|955875|31|NZ_CP021641|CRISPRCasFinder 955875-955905 31 MN694742 Marine virus AFVG_250M371, complete genome 7175-7205 10 0.677

1. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to NZ_CP019064 (Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.958

acagcagacagcagacagcagaca	CRISPR spacer
aaagcagacagcagacagcagaca	Protospacer
* **********************

2. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to NZ_CP019064 (Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.958

acagcagacagcagacagcagaca	CRISPR spacer
acagcagacagcagacagctgaca	Protospacer
******************* ****

3. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NC_017858 (Methylophaga frappieri strain JAM7 plasmid, complete sequence) position: , mismatch: 3, identity: 0.906

attagtaataggcacggacttgtctca-cgcta	CRISPR spacer
attagtaatacgcacggacctgtctcaccgct-	Protospacer
********** ********.******* **** 

4. spacer 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to JX681814 (Burkholderia phage phiX216, complete genome) position: , mismatch: 4, identity: 0.875

tttgagaactacacgcgcacggcgcaagtctt	CRISPR spacer
ttcgagaactacacgcgcacggcgcaggtcgc	Protospacer
**.***********************.*** .

5. spacer 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NC_010463 (Enterobacteria phage Fels-2, complete genome) position: , mismatch: 4, identity: 0.875

tttgagaactacacgcgcacggcgcaagtctt	CRISPR spacer
tttgagaactacacccgcacggcgcaggtgct	Protospacer
************** ***********.** .*

6. spacer 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to KT630647 (Salmonella phage SEN8, complete genome) position: , mismatch: 4, identity: 0.875

tttgagaactacacgcgcacggcgcaagtctt	CRISPR spacer
tttgagaactacacccgcacggcgcaggtgct	Protospacer
************** ***********.** .*

7. spacer 2.1|955274|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to HM461982 (Burkholderia phage KS14, complete genome) position: , mismatch: 4, identity: 0.875

tttgagaactacacgcgcacggcgcaagtctt	CRISPR spacer
ttcgagaactacacgcgcaccgcgcaagtgct	Protospacer
**.***************** ******** .*

8. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041049 (Citrobacter sp. CF971 plasmid pBM527-3, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacgcagggacttgtctcacgcat	Protospacer
********** *** ***************  

9. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022300 (Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacggacggacttgtctcacgcat	Protospacer
********** * *****************  

10. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX912255 (Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacgcagggacttgtctcacgcat	Protospacer
********** *** ***************  

11. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to LC486677 (Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacgcagggacttgtctcacgcat	Protospacer
********** *** ***************  

12. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to JN581942 (Uncultured bacterium plasmid pHH2-227, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacggacggacttgtctcacgcat	Protospacer
********** * *****************  

13. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023160 (Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacgcacggacttgtctcactccg	Protospacer
********** ***************** *..

14. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017023 (Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence) position: , mismatch: 4, identity: 0.875

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacgcacggacttgtctcactccg	Protospacer
********** ***************** *..

15. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to MN692991 (Marine virus AFVG_117M48, complete genome) position: , mismatch: 5, identity: 0.792

acagcagacagcagacagcagaca	CRISPR spacer
gtcttagacagcagacagcagaca	Protospacer
..  .*******************

16. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to MN692991 (Marine virus AFVG_117M48, complete genome) position: , mismatch: 5, identity: 0.792

acagcagacagcagacagcagaca	CRISPR spacer
gtcttagacagcagacagcagaca	Protospacer
..  .*******************

17. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to MN694137 (Marine virus AFVG_250M241, complete genome) position: , mismatch: 5, identity: 0.792

acagcagacagcagacagcagaca	CRISPR spacer
gtcttagacagcagacagcagaca	Protospacer
..  .*******************

18. spacer 1.2|391252|24|NZ_CP021641|CRISPRCasFinder matches to MN694137 (Marine virus AFVG_250M241, complete genome) position: , mismatch: 5, identity: 0.792

acagcagacagcagacagcagaca	CRISPR spacer
gtcttagacagcagacagcagaca	Protospacer
..  .*******************

19. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to CP050279 (Klebsiella pneumoniae strain 10553 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatagggagggacttgtctcactgtt	Protospacer
************ * *************  * 

20. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030081 (Enterobacter hormaechei strain 20710 plasmid pVIM-20710, complete sequence) position: , mismatch: 5, identity: 0.844

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagaaatacgcacggacttgtctcattctc	Protospacer
***** **** ****************. ** 

21. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NC_008342 (Nitrosomonas eutropha C91 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.844

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacggacggacttgtctcaaacca	Protospacer
********** * ************** .*.*

22. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG456577 (Vibrio alginolyticus strain Vb1978 plasmid pVb1978, complete sequence) position: , mismatch: 5, identity: 0.844

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagaaatacgcacggacttgtctcattctc	Protospacer
***** **** ****************. ** 

23. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021021 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pE, complete sequence) position: , mismatch: 6, identity: 0.812

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtattacgcacggacttgtctcactggt	Protospacer
******* ** *****************    

24. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046349 (Citrobacter portucalensis strain FDAARGOS_738 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtattacgcacggacttgtctcactgac	Protospacer
******* ** *****************    

25. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021004 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pE, complete sequence) position: , mismatch: 6, identity: 0.812

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtattacgcacggacttgtctcactggt	Protospacer
******* ** *****************    

26. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

27. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

28. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

29. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

30. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

31. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

32. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

33. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

34. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

35. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

36. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

37. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

38. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ataccggctgcggcaaacagttgcatggctgc-	CRISPR spacer
gcaccggcggcggcaaacagtttca-ggaagcg	Protospacer
..****** ************* ** **  ** 

39. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NC_018830 (Bordetella parapertussis Bpp5 plasmid BPP5P1, complete sequence) position: , mismatch: 7, identity: 0.781

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
attagtaatacgcacggacctgtgccaacctc	Protospacer
********** ********.*** .**  ** 

40. spacer 2.3|955394|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to MH616791 (Uncultured bacterium isolate ctbj14 plasmid p_ctbj14, complete genome) position: , mismatch: 8, identity: 0.75

ttcgcgcatggctttctctagcaccgcaaaat	CRISPR spacer
tgtcttaatggatttctctggcaccgcaaaat	Protospacer
* . .  **** *******.************

41. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013631 (Rhizobium sp. N324 plasmid pRspN324a, complete sequence) position: , mismatch: 9, identity: 0.719

ataccggctgcggcaaacagttgcatggctgc	CRISPR spacer
aggccggctgcggcaaacaggttcatcgtcaa	Protospacer
* .***************** * *** *... 

42. spacer 2.2|955334|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.719

ataccggctgcggcaaacagttgcatggctgc	CRISPR spacer
aggccggctgcggcaaacaggttcatcgtcaa	Protospacer
* .***************** * *** *... 

43. spacer 2.4|955454|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to MG945414 (UNVERIFIED: Microviridae sp. isolate 4163-1801, complete genome) position: , mismatch: 9, identity: 0.719

acatcgtagtagtagaacgtccggcctgagcg	CRISPR spacer
tctgcgaagtagtagaacctccggcctgcatt	Protospacer
 *  ** *********** ********* .. 

44. spacer 2.4|955454|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to MN901521 (Halorubrum coriense virus Serpecor1, complete genome) position: , mismatch: 9, identity: 0.719

acatcgtagtagtagaacgtccggcctgagcg	CRISPR spacer
ccaccgtagtagtagaacttccggtcgccacc	Protospacer
 **.************** *****.*   .* 

45. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041049 (Citrobacter sp. CF971 plasmid pBM527-3, complete sequence) position: , mismatch: 10, identity: 0.688

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
gcctgtaatacgcagggacttgtctcaaccgc	Protospacer
... ****** *** ************  *  

46. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX912255 (Enterobacter cloacae strain H140960786 plasmid pJF-786, complete sequence) position: , mismatch: 10, identity: 0.688

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
gcctgtaatacgcagggacttgtctcaaccgc	Protospacer
... ****** *** ************  *  

47. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to LC486677 (Serratia marcescens MRY16-414SMA plasmid pMRY16-414SMA_2 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
gcctgtaatacgcagggacttgtctcaaccgc	Protospacer
... ****** *** ************  *  

48. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT853887 (Xanthomonas fragariae strain PD5205 plasmid pPD5205-21, complete sequence) position: , mismatch: 10, identity: 0.688

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
ccctgtaatacggacggacttgtctcactggc	Protospacer
 .. ****** * ***************    

49. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016835 (Xanthomonas fragariae isolate Fap29 plasmid pFap29-2, complete sequence) position: , mismatch: 10, identity: 0.688

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
ccctgtaatacggacggacttgtctcactggc	Protospacer
 .. ****** * ***************    

50. spacer 2.5|955514|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT853881 (Xanthomonas fragariae strain NBC2815 plasmid pNBC2815-21, complete sequence) position: , mismatch: 10, identity: 0.688

attagtaataggcacggacttgtctcacgcta	CRISPR spacer
ccctgtaatacggacggacttgtctcactggc	Protospacer
 .. ****** * ***************    

51. spacer 2.7|955634|32|NZ_CP021641|PILER-CR,CRISPRCasFinder,CRT matches to MT939241 (Enterococcus phage 9183, complete genome) position: , mismatch: 10, identity: 0.688

atccccgcattttcagtttcacgaccgatttt	CRISPR spacer
tcatcaaagttttcagtttcacgagcaatttt	Protospacer
 . .* . .*************** *.*****

52. spacer 2.11|955875|31|NZ_CP021641|CRISPRCasFinder matches to MN694742 (Marine virus AFVG_250M371, complete genome) position: , mismatch: 10, identity: 0.677

agcttctgggtttgtagcgtgtgcagataag	CRISPR spacer
tccttctgggcttgtagcgtctgcaatacca	Protospacer
  ********.********* ****.    .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1110476 : 1121377 6 Burkholderia_virus(33.33%) NA NA
DBSCAN-SWA_2 1485032 : 1540866 64 Pseudomonas_phage(50.0%) tail,head,integrase attL 1479935:1479950|attR 1522898:1522913
DBSCAN-SWA_3 2143626 : 2205395 55 uncultured_Caudovirales_phage(28.57%) protease,integrase,plate attL 2140398:2140413|attR 2212625:2212640
DBSCAN-SWA_4 2298906 : 2307565 10 uncultured_Mediterranean_phage(28.57%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage