CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018866	Bacillus cohnii strain DSM 6307 chromosome, complete genome	2 crisprs	DinG,csa3,RT,cas3,c2c4_V-U1,c2c10_CAS-V-U3,DEDDh,cas14j	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018866_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018866_1

240688-240798

Orphan

Consensus_repeat	Method
AAGTGCGTCAATTATTTATCCAGCTGC	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP018866_1

>merge|NZ_CP018866|1|240688-240798|CRISPRCasFinder
AAGTGCGTCAATTATTTATCCAGCTGCATCAAAAAGTTCGCCAAGTGCGTCAATTACTTATCCAGCTGCGTCAAAAAGTTCGCCAAGTGCGTCAATTACTTATCCAGCTGC

>NZ_CP018866|1|1|240688-240798|CRISPRCasFinder
AAGTGCGTCAATTATTTATCCAGCTGC	ATCAAAAAGTTCGCCAAGTGCGTCAATTACTTATCCAGCTGCGTCAAAAAGTTCGCC
AAGTGCGTCAATTACTTATCCAGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018866.1\|WP_066421323.1\|238235_239402_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_CP018866.1\|WP_084380767.1\|228608_229859_+\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|223587
NZ_CP018866.1\|WP_157729266.1\|240857_241376_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066421325.1\|239416_240547_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP018866.1\|WP_066421447.1\|241525_242854_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NZ_CP018866.1\|WP_066421463.1\|247867_249163_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP018866.1\|WP_066421311.1\|232740_234072_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP018866.1\|WP_066421449.1\|242867_243593_+\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|223290
NZ_CP018866.1\|WP_066421308.1\|232144_232744_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP018866.1\|WP_066421466.1\|249337_249709_+\|DUF1992-domain-containing-protein	unknown	unknown	gnl\|CDD\|378159
NZ_CP018866.1\|WP_094366019.1\|230116_231550_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|372646
NZ_CP018866.1\|WP_157076717.1\|231801_231960_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066421314.1\|234077_235169_+\|DUF917-domain-containing-protein	unknown	unknown	gnl\|CDD\|377590
NZ_CP018866.1\|WP_066421317.1\|235168_236731_+\|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|223223
NZ_CP018866.1\|WP_066421451.1\|243678_244764_+\|nitric-oxide-synthase-oxygenase	unknown	unknown	gnl\|CDD\|376957
NZ_CP018866.1\|WP_066421458.1\|245750_246755_-\|rod-shape-determining-protein-MreB	unknown	unknown	gnl\|CDD\|184403
NZ_CP018866.1\|WP_066421460.1\|246982_247543_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066421455.1\|245390_245636_-\|cytoplasmic-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066421453.1\|244920_245349_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066421320.1\|236778_237987_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035

Protein	Function_ID	Function_description	E-value
NZ_CP018866.1\|WP_066421323.1\|238235_239402_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	2.56589e-06
NZ_CP018866.1\|WP_084380767.1\|228608_229859_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.52234e-117
NZ_CP018866.1\|WP_066421325.1\|239416_240547_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	5.72482e-47
NZ_CP018866.1\|WP_066421447.1\|241525_242854_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.07638e-83
NZ_CP018866.1\|WP_066421463.1\|247867_249163_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	6.61576e-130
NZ_CP018866.1\|WP_066421311.1\|232740_234072_+\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	6.3762e-86
NZ_CP018866.1\|WP_066421449.1\|242867_243593_+\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|223290	COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism].	3.13633e-36
NZ_CP018866.1\|WP_066421308.1\|232144_232744_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.14291e-17
NZ_CP018866.1\|WP_066421466.1\|249337_249709_+\|DUF1992-domain-containing-protein	gnl\|CDD\|378159	pfam09350, DUF1992, Domain of unknown function (DUF1992). This family of proteins are functionally uncharacterized.	3.93537e-17
NZ_CP018866.1\|WP_094366019.1\|230116_231550_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|372646	pfam13610, DDE_Tnp_IS240, DDE domain. This DDE domain is found in a wide variety of transposases including those found in IS240, IS26, IS6100 and IS26.	5.21332e-25
NZ_CP018866.1\|WP_066421314.1\|234077_235169_+\|DUF917-domain-containing-protein	gnl\|CDD\|377590	pfam06032, DUF917, Protein of unknown function (DUF917). This family consists of hypothetical bacterial and archaeal proteins of unknown function.	0
NZ_CP018866.1\|WP_066421317.1\|235168_236731_+\|hydantoinase/oxoprolinase-family-protein	gnl\|CDD\|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	5.13954e-103
NZ_CP018866.1\|WP_066421451.1\|243678_244764_+\|nitric-oxide-synthase-oxygenase	gnl\|CDD\|376957	pfam02898, NO_synthase, Nitric oxide synthase, oxygenase domain.	0
NZ_CP018866.1\|WP_066421458.1\|245750_246755_-\|rod-shape-determining-protein-MreB	gnl\|CDD\|184403	PRK13929, PRK13929, rod-share determining protein MreBH; Provisional.	0
NZ_CP018866.1\|WP_066421320.1\|236778_237987_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.87994e-101

>NZ_CP018866.1|WP_066421325.1|239416_240547_+|trypsin-like-peptidase-domain-containing-protein
MKKVWVLNAILSLLIVAAGVYAWSWVKNTLPKQLAAPSSLYIQAEETKKEEVNPQLKEIIYEAQKLVVKIEIADGSFGSGFLYNNQGDIITNAHVVANAKEVKVITVDSKELTGEVIGISVDTDIAVVRVLELEGTKPLRIANNQKAELGDEVIALGSPLGLQNTVTTGIVSGVGRSFHIEPFRYEDMYQISAPIAPGNSGGPLIDTRTGEVIGINSAVMEQGVIGFSIPINNVISLIRSWSETPMTSLPRVGVAVPGNNNGQSSSNEDIANYIAQYYFESINHRDYVTAYSLLGSELQSTLSYEEFRADFMNVLAVEINSTFTEMVDRNVNVTVLIQTQQRGDDGLTFTNYECNFVLGLENDQMKILSKDRKKID
>NZ_CP018866.1|WP_066421323.1|238235_239402_+|zinc-ribbon-domain-containing-protein
MFCHRCGVKVVEDANYCSNCGVSLKEEPTLLERNRKSTTSRRKRMVPFFLPILTAIVVFASIFAYYSYEKKVNAQVLAWKETSESLALDGDYDRAKTYLKDALEKRPNYFVLRNNLEVVSIVEEYEEELQKVASLLEERDFEEAEKKLQKMREGMNNIQGPLADKIKSEINSLEGSIKIAKIVMDLEKLTTVDELAKQLQILSSIPSEDGKVVKEQIMNRIVQLSIEDAEKELENRQFTRALAIADRGLQYALNDERLLAFKEKVQLDQQAFEQAEIERIERAKEAAAQEELKNRTAAVEVVSFEAEMDEFKGLVVSGEIKNVATADISSITVSYKILDKNRKEIEERSTTVFPYTLSPGETGKFEDYYFDVDDEVTVEIDNITWFVE
>NZ_CP018866.1|WP_066421320.1|236778_237987_-|cytochrome-P450
MNKEVLQSFIHNPFPYLEQFSQGNNVQWVHLFNTSGWLVTGYKEVETVLKDGRFMKEIRNLLPPDQIFTPPAHLMPAVMTVRNMMLFKDAPDHTRLRSLVTKAFTPRMVEKLRPTIKSLASYLMEQRRGKEQHEIIHDFAYLLPVMVIAELIGVEKEDRDQFRIWSEAFIKFIDFNTTAEEWEAAAPHVEEANNYFRELIKKRRLEPANDLLSGLITAEEAGDKLTEQEIISTCLLLLIAGHETTVNLITNGYYQLLKHQDQYEKVREDRSLLSNLVEETLRYDPPVLLTSRWVGEDMNLFGVEMEKAQMAFVVLGAANRDPAVVERPHEFDIIRSTIKHLSFASGPHFCLGAPLARLEAEIAFETLLDHFHQPELMEEPTRRANVAFRGFETLKVKAEVKI
>NZ_CP018866.1|WP_066421317.1|235168_236731_+|hydantoinase/oxoprolinase-family-protein
MPNYRIGIDVGGTHTDAVVIDENYNVVAEVKASTTEDVSSGIYDALSKVVASANVPVNEIKHAMLGTTHCTNAIVERKRLNNIAIVRIGAPATLAIKPLVGVPDDLREMLGKHVYLVRGGHEFDGRTIAELDEEHLYKIAHEVKGKVDSVAITSVFAPVSADHEQRAAAIFQEVLGDEVALSLSHEIGSVGLLERENATILNAAIVKVARTTASGFINALQQEGIHAQVFFGQNDGTLMSVEYTVKYPILTIACGPTNSLRGASYLSDRADALVIDVGGTTTDVGVLVDSFPRQSFLAVELGGVRTNFRMPDITAIGLGGGTIVRIAEDESFQIGPDSVGHKLPQKSLIFGGDTLTTTDVAVALGIVELGDPSKVAHLNKELLQKIYDRMIEMVEETIDKMKTSQEPIPVILVGGGSVLFPGELQGASEVIKPTNAGVANAIGSAISQVSGQIEKIFSVDELGREKTMELAKDMARQEAIKAGADPEQIYIVDFEDVPLAYLPGNATKIRAKAAGPLFLN
>NZ_CP018866.1|WP_066421314.1|234077_235169_+|DUF917-domain-containing-protein
MRYIGKEEIENIAIGAALLGTGGGGDPYIGKLMALQAIEEYGPIKLLSIDEVPDDALVVPTAMMGAPTVMIEKVPSGEEAIESFQTLQNYLGKEIFATMPIEAGGVNSLLPLALAARLGLPVIDADGMGRAFPELQMVTFHLDGVKATPMVLSDEKGNNLLFNTIDSVWAERIARGATIEMGGSVMLSIYPMTGKNIKQSAIHHSLTFEEQIGKAIREAKKNNKNPIDEVIALTNGYSLFKGKVTDINRKTQQGFSKGTATIEGLEENKGEECYLHFQNEHLLAETKDNVLCVTPDLITVLDKETGMPITTEGLKYGARCVVIGIPADKKWRTQKGIEVAGPRYFGYDLDFSPVEQLLRKENN
>NZ_CP018866.1|WP_066421311.1|232740_234072_+|cytosine-permease
MTIKQDQAITKDYEREPVPLEQRKGWLKLSIVWLGGIVALSATALGGALGGGLPLSQAIIASFVGTFILAILSALCGVVGAKTGLSTSFVSKFALGRYGSYAVSIIIAIALFGWFGVQLDIFGATLHNVILSVFNVSVHPKLLVVIGGICMTLTAFIGYKAIEKLSLVAVPLLAVLLIASLGKVMSNSDFSTVANAPLFGDALTVGLSVSLIIGSLATGAIIGPDISRYARSTKDAVISSFVGFFVGFSIVLIIAAILAKATTEVDIVAIMLGLGWGSAALLILILAQWTTNDNNLYSSALGFSVVFKKVPKSMLTVVAGTIGTLMAVGGIYDNFIPFLIFLSALIPPIGGIYVGDFLNNRSKYQFSNLSNVKNINLVSIAIWGIASFVAFSTTPSPNGFGWFTLTGASGFDAFLVAFILQFIVSKTLNKNEQADIELKAKGA
>NZ_CP018866.1|WP_066421308.1|232144_232744_+|TetR/AcrR-family-transcriptional-regulator
MRQKLIEAALHQYSLHGYHGATMRKIADEVGIKPASIYFFFENKEELFIAAFEQLLQAHFQAMQTVLAENEDHPVEEIFSKMLHGIASHHTGDMQGTIAFISLVTSPIPEIDSYLKKYMLKFNNWLIDSLQTLIKQDYPTISDQEVDRIIKQYVLIGNGVFWGINLYEGESFKEQVELADSLIQSLFIGLDKKEKETIS
>NZ_CP018866.1|WP_157076717.1|231801_231960_+|hypothetical-protein
MKPAYLLAIMIIILIVIIVGSYWITKDYWQVGTAIVYSSDYGVSQFHTRSVT
>NZ_CP018866.1|WP_094366019.1|230116_231550_-|DDE-type-integrase/transposase/recombinase
MYPQIITYLLTFINYQEQIIRTLLTLLIGKSMFDKPKEAPVNQPYRKLQIDDLPIIEKLERLDYQLLLAEHLQSKGKPLKPVQRRANSTPVPSTLCCPKCGAPSAYLYANNGGKGQYQCKVCACVFNKKSHYQKEAILKCPHCLKTLEKIKERKDFHVFKCKNDMCTYYQKNLSAMTKKEKKQFKEDPQSLKVRYIYRKFHIDYQPLSKQSPKQPKVDLSRLYVSPHTLGLILTYHVNYGLSARKTAAIMKDIHGVSVSHQSILNYENSVALWLKPYIDYFPYELSDQFCGDETYIRVNGRWHYLFFFFDAVKKVILSYPVSPNRDTATAIRAIDEVLVKLKVIPENLQFVVDGNPIYLLAQHFFAENHISFDVKQVIGLTNEDDVSREYRPLKQIIERLNRTFKGNYRSTHGFGSEQGSVSFVTLFVAYFNFLRPHSSLEGKVPVTLPELEKLPTMPARWTALIGLAQDWIQQQSA
>NZ_CP018866.1|WP_084380767.1|228608_229859_+|DEAD/DEAH-box-helicase
MTTSFISTLKPFIQQIWEKSEFQEPTAIQQQAIPAALEGKDLLIESPTGTGKTLAYLLPILEKVEANKQHPQAIILVPSKELAMQILEQIQKWTEGTDITGASFIGGANIKRQIEKLKKKPEIIVGTPGRLAELIQMKKIKMHEMKTVVLDEGDQLLTSENMKSVKNIVKSTLSERQVMLVSATLKEEANAVAKEFMQDPVTVKVERDEKSKAQVEHFYVVCEKREKVNVLANVLRQPGIKALAFVRDIGNLAVVTEKLTYKQLNVGVLHGDSSKKERETALKDFRREEYPILLATDVAARGLDINEVTHVVHFDVPLDAAAYTHRSGRTGRQGATGTVISLVAPTEERDLKRIARDLNLTLNKREVYGGRLVEPKEGSAKPAGKEKRPNSSNNTRPKNAGPGPSKRNSQTKSRSK
>NZ_CP018866.1|WP_157729266.1|240857_241376_+|hypothetical-protein
MRQLISAVGTKARMVGRKKSSVGAKAWVVGRKKSSVGAKARVVGRKKCPDGAKARVVGRKKCPDGAKALVVGRKKSSVGAKAWVVGRKKSSDGAKARVVGRKKSSVGAKARVVGRKKCPDGAKARVVGRKRCPVGVKARIDGRKFVLLAKKAHEVGRNKNPIDAIYLQLNHK
>NZ_CP018866.1|WP_066421447.1|241525_242854_+|polysaccharide-biosynthesis-protein
MKKFYKGVLLLALAAFLGESLEFLVNMVLAKQLGEVGLGLYMSIMPVIFLVVIIASLELPVSVSKFVAEKEQKYHVSMLRHTFKLTLKFTIIYLLLAAIVLPNIPVFQSYHPLVKWLVLLLIPIISFTSIVRGYFMGKQMMGKIAFSNFLRKAVQLVLLTVVYYLFQFSLQTSILIAICTFIGTELVVCLYLVLMYFTQWRKMKTEPNSELAKSTVHASLLQVSIPTTAMRIFHSVTHAVQPFLIKIALLKAGFTETMALEQFGLLAGVAITIGFFPAFIAHSLMIVLIPTVSEAHSKGDHVKLQKLLQQVMFITFLYGIPAVIVCYIFADPLTHIFFENSSASTYLQLLWPNFLFNFIVIPLQAFMIGLGLIKDAFIHIVWSHVVGFALIFFLGSMSSFNMGGVIIGMNTGTVLLMMMHYLTVCNKIGVSFTLQVPKNEWR
>NZ_CP018866.1|WP_066421449.1|242867_243593_+|5-formyltetrahydrofolate-cyclo-ligase
MSQTRELKDSIRSKVWTKLEDEKLGRFPFPLRGRIPNFKGAEKAASFVTTMQVYKDAKVIKVNPDSPQLPLRTQILKDGKTLLVPTPRLKDGFIQVKPSWVPPGEERKAASLKHILSYGKVIPLTEIPPIDLIVVGSVAMHKDGRRLGKGEGYADREYAIIRELGNPLVPVITTVQSAQLVDDDIPRDEYDLTADWIVTEEGILETHSPYDKPKGIVWEKVTDEELEEMPVLREIKRLTNR
>NZ_CP018866.1|WP_066421451.1|243678_244764_+|nitric-oxide-synthase-oxygenase
MQAKELWQEAKKFLVTCYEELGKREEELQVRLMQVEREIKETGYYDHTYEELAHGAKMAWRNSNRCIGRLFWNSLHVFDKRHVNDEVEIAQSLIEHIDFATNNGKIRPAITIYKPKRDKEEIRIWNHQLLRYAGYETEYGVIGDPASIAFTKQCEKLGWKGEGTHFDLLPLVIQVIGREPVVYEIPRDVVLEVPLTHPELNEFADLNLKWYSVPIISEMKLEVGGIHYTAAPFNGWYMETEIGARNLADTFRYNMLPKVASIMGLDTSSNATLWKDKALIELNIAVLHSFKKYGVSIVDHHTASMQFQHFERQEGEKCRHVTGDWTWLIPPVSPAATHIFHQSYEDKIVTPNYFYQDLPYK
>NZ_CP018866.1|WP_066421453.1|244920_245349_+|hypothetical-protein
MKKLSFLLLFIILTVVGCNSVKDNNETELGMEKAQRIEVLEEPNTVVTVIDGEDIHEFIESLKVEQWESEKIPSGEKQGKIYKMFQEDTKTVINSNKNEEELKEISTIITYETGPYIEFIIKNVSLSFKVPDEVYEYLSTKW
>NZ_CP018866.1|WP_066421455.1|245390_245636_-|cytoplasmic-protein
MNELLKQAHRFSSKNRKSLEESNVCGCFYCLKIFSPALIEEWWDNEETAVCPHCGIDSVIGDSSDFHITKEFLQEMHEAWF
>NZ_CP018866.1|WP_066421458.1|245750_246755_-|rod-shape-determining-protein-MreB
MFSNAEIGIDLGTANTLVYSKNKGIVYNEPSVVALDIETKTVLAVGQEAKNMIGKTPGKIVAVRPLKDGVIADFDVTTSMLKQIMKKATRTLGFTLKKPNVVVCTPSGSTSVERRAIQDAVRNCGAKHVHLIEEPVAAAIGSDLPVEEPVANVVVDIGGGTTEVAIISYGGVVSCHSIRVGGDQLDEDIIHHVRKRYNLLIGERTAEQIKMEIGYALVEHPEMTMEIRGRDLVSGLPKTIELQSTEIQKALKESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGGSLLNGMQEWLSEEIVVPVYLAPNPLESVAIGTGRSLAVIDKIQKVK
>NZ_CP018866.1|WP_066421460.1|246982_247543_+|hypothetical-protein
MKDREEVLYEEKERLFTKKQIVWIIVSAVSLMVIVIALLFGIDQVEAYKHKRTNHYLQEVEQLLKESEQTLQTFKEGEDVPVELLPIIEASGKEWIATAQSLNAPSAFTKHKEAVKQLILKRYSVVSSAALMVEINNYQVNTIEELLAASQELVDLEKEQLFASLEAAQIKYELLEDGTIRYYIRK
>NZ_CP018866.1|WP_066421463.1|247867_249163_-|NCS2-family-permease
MLQWLKSYFDLSGHETNLKREFMAGLISFFTIVYIIAVNASILAEAGIPLEAGIIATILTCVVGCWLMGIWANAPIILVPGMGINAMFTYTLVLSMGLSWQEALGVVVVSGIIVTIVSFTRLSQLLLEAIPHSLKHAITVGLGLFLTLIGLEKGGLIVKGESSLLALGDMTNPFVIATILSIIVTVILFIRNVPANFLISIIVGTVIAGLLGVVNFSDVGNSSISFESYASLFGAISFEKVGSFAFLVAVFSLTMVLLFENIGLINGHLNMINRPDKFKRSFQANGISILTSGLFGSSPTVSTVETAAGIVAGGRTGVTAIVTGSLFLLSILAIPFMAIIPGSAIAPILIIIGVLMLQSVKQIDFHDLSEGIPAFLVVVMIPFSYSIADGIAFGFIAYPLVKLAIGKAKEVPATLYIIAALFFLTFVAHVY
>NZ_CP018866.1|WP_066421466.1|249337_249709_+|DUF1992-domain-containing-protein
MDFSRLTDDRIRKAYEEGEFENLPGYGKKLQLEDLSNVPPEMRMAYKMMKNAGMMEEQQVRSEIEYIEDLIKNAHDDLEEQRLTQRLNEKLLRFNQIMDKKKKETNSATFKNYQSKIYDRFSD

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Crispr_ID: NZ_CP018866_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018866_2

1210753-1210832

TypeV-U1

Consensus_repeat	Method
ATTTGTTTAATTATATTAAACTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018866_2

>merge|NZ_CP018866|2|1210753-1210832|CRISPRCasFinder
ATTTGTTTAATTATATTAAACTTTTGCTTGTAATGGAAGAACTATCCGTGTTATGATTTGTTTAATTAAATTAAACTTTT

>NZ_CP018866|2|2|1210753-1210832|CRISPRCasFinder
ATTTGTTTAATTATATTAAACTTTT	GCTTGTAATGGAAGAACTATCCGTGTTATG
ATTTGTTTAATTAAATTAAACTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018866.1\|WP_094366282.1\|1208162_1208522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066410836.1\|1203988_1204699_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|226098
NZ_CP018866.1\|WP_066410833.1\|1206388_1207054_+\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|198006
NZ_CP018866.1\|WP_066410830.1\|1207899_1208106_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224393
NZ_CP018866.1\|WP_066410838.1\|1202930_1203839_+\|malonate-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP018866.1\|WP_066410805.1\|1225252_1225612_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066410808.1\|1224757_1225234_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|308978
NZ_CP018866.1\|WP_066410835.1\|1204902_1206399_+\|DUF1538-domain-containing-protein	unknown	unknown	gnl\|CDD\|377867
NZ_CP018866.1\|WP_066410824.1\|1209504_1210722_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP018866.1\|WP_066410819.1\|1213795_1214500_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018866.1\|WP_066410821.1\|1212317_1213742_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP018866.1\|WP_084380067.1\|1216911_1218570_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP018866.1\|WP_066410810.1\|1221417_1224615_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223627
NZ_CP018866.1\|WP_066410840.1\|1201384_1202491_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|180601
NZ_CP018866.1\|WP_066410817.1\|1214822_1216151_+\|CitMHS-family-transporter	unknown	unknown	gnl\|CDD\|225407
NZ_CP018866.1\|WP_066410831.1\|1207070_1207721_+\|YdeI/OmpD-associated-family-protein	unknown	unknown	gnl\|CDD\|379149
NZ_CP018866.1\|WP_066410826.1\|1208551_1209415_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP018866.1\|WP_066410815.1\|1216214_1216919_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP018866.1\|WP_066410812.1\|1218819_1220649_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP018866.1\|WP_066410823.1\|1210849_1212160_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863

Protein	Function_ID	Function_description	E-value
NZ_CP018866.1\|WP_066410836.1\|1203988_1204699_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|226098	COG3568, ElsH, Metal-dependent hydrolase [General function prediction only].	8.3298e-42
NZ_CP018866.1\|WP_066410833.1\|1206388_1207054_+\|P-II-family-nitrogen-regulator	gnl\|CDD\|198006	smart00938, P-II, Nitrogen regulatory protein P-II. P-II modulates the activity of glutamine synthetase.	8.97908e-09
NZ_CP018866.1\|WP_066410830.1\|1207899_1208106_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	3.23228e-21
NZ_CP018866.1\|WP_066410838.1\|1202930_1203839_+\|malonate-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.1792e-24
NZ_CP018866.1\|WP_066410808.1\|1224757_1225234_+\|hypothetical-protein	gnl\|CDD\|308978	pfam03682, UPF0158, Uncharacterized protein family (UPF0158).	0.00245033
NZ_CP018866.1\|WP_066410835.1\|1204902_1206399_+\|DUF1538-domain-containing-protein	gnl\|CDD\|377867	pfam07556, DUF1538, Protein of unknown function (DUF1538). This family contains several conserved glycines and phenylalanines.	3.73543e-72
NZ_CP018866.1\|WP_066410824.1\|1209504_1210722_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.29592e-10
NZ_CP018866.1\|WP_066410812.1\|1218819_1220649_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.36776e-130
NZ_CP018866.1\|WP_066410821.1\|1212317_1213742_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.95116e-71
NZ_CP018866.1\|WP_084380067.1\|1216911_1218570_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	0
NZ_CP018866.1\|WP_066410810.1\|1221417_1224615_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	5.70717e-97
NZ_CP018866.1\|WP_066410840.1\|1201384_1202491_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|180601	PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase.	5.25903e-166
NZ_CP018866.1\|WP_066410817.1\|1214822_1216151_+\|CitMHS-family-transporter	gnl\|CDD\|225407	COG2851, CitM, H+/citrate symporter [Energy production and conversion].	4.86143e-178
NZ_CP018866.1\|WP_066410831.1\|1207070_1207721_+\|YdeI/OmpD-associated-family-protein	gnl\|CDD\|379149	pfam13376, OmdA, Bacteriocin-protection, YdeI or OmpD-Associated. This is a family of archaeal and bacterial proteins predicted to be periplasmic. YdeI is important for resistance to polymyxin B in broth and for bacterial survival in mice upon oral, but not intraperitoneal inoculation, suggesting a role for YdeI in the gastrointestinal tract of mice. Production of the ydeI gene is regulated by the Rcs (regulator of capsule synthesis) phospho-relay system pathway independently of RcsA, and additionally transcription of the protein is regulated by the stationary-phase sigma factor, RpoS (sigma-S). YdeI confers protection against cationic AMPs (Antimicrobial peptides) or bacteriocins in conjunction with the general porin Omp, thus justifying its name of OmdA, for OmpD-Associated protein.	6.80935e-17
NZ_CP018866.1\|WP_066410826.1\|1208551_1209415_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.4564e-31
NZ_CP018866.1\|WP_066410815.1\|1216214_1216919_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	6.57843e-86
NZ_CP018866.1\|WP_066410823.1\|1210849_1212160_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.78029e-58

>NZ_CP018866.1|WP_066410824.1|1209504_1210722_-|helix-turn-helix-transcriptional-regulator
MLGERIRKLRKQKKLTLEALAGEKLTKGMLSLIENDKAQPSMESLAYIAERLNVEVAELLGNANASELRNVMVQAEQLINIDHEEDPNKYKKIIKLIEPFIDKVTKSYESARLLELYSYALYYEKIDGWQTLLQRAADIFDELNVSSSRTKIAVFRSSIKFVEHRYEEALDVFLKERKAVEEQHFYIDPLSLLELDYHESVLYFAVGNSEPALNVMERAITLSKEKRIFYLIDDLYRLAAVHAMDDGNKEKQNYYLMKLKKYGEFADHEPSIHFYHLINLMMLISEEKQYTKALELIEEYLEEKMVHYETWLSAEKGKALYYLGRYDEAFAVLEQVKVPEYLHHPYDLAMFYILESFKGLIQLVLGNNEAALSYAKKGVQLFETLPESAYKRFSIVTLEKIKKEF
>NZ_CP018866.1|WP_066410826.1|1208551_1209415_-|alpha/beta-hydrolase
MKITNHKVNAGGVQIHVVDYGGIGEPIVCVHGLTANARFWDAIAEQLSPTYRVLAVDLRGRGDSEKPSDGYHIQQHAQDIRHVLTHFDIENAIVMGHSLGAIISLCFTATYPERVKRLILVDGGEDLEREVAEVLQPSIERLGRVYLNFNEYTEELRSKPFFQPWNSYVHEYFYADVHHHPDGTVSTKTTKDIIDKEIEALYSTNVNQYHDNIHVPALLFYAPHCLYHPTAYLLSKETGQHLATKWKNSKFIEVPGSNHFSIIFSEYRLVTEEIRQFLGSNIEEKAR
>NZ_CP018866.1|WP_094366282.1|1208162_1208522_+|hypothetical-protein
MLIGGGLAIYLIGKETGEYPLNLFLPMIIGVLGGCLVFFAGLKIKEKRNGNVPDVDERTLRNLQKYFMVVLYVVLFGSGAALIIAFASGVQYIETGLLIVCLMGVYLVVGVGALVAKKI
>NZ_CP018866.1|WP_066410830.1|1207899_1208106_+|helix-turn-helix-transcriptional-regulator
MKVINHIKEIRTSKEITQVQMAEDLQITRQTINAIEKNKYNPSLELALKLAKYFNVPFEQLFYLEEEE
>NZ_CP018866.1|WP_066410831.1|1207070_1207721_+|YdeI/OmpD-associated-family-protein
MTIINKLKLDKYENLAVVNEPSDYHIFDGYDTALIGNHDAIFIFIETINDMVEHTERVINEQQLREKGYLFFAYPKKGNKRYETFVHRDEIFPTLKVGEDGYVGDSDVKFSRMVAMDDVYTVVGLKREKKKAQKSSVASQCVADYEDNVKDVEAMLAEHPNERTFFLELTPGYKRDWARYIFSAKQQKTREKRQAQMVDILSQGYKTVDLYRMKKK
>NZ_CP018866.1|WP_066410833.1|1206388_1207054_+|P-II-family-nitrogen-regulator
MSSNSEMIAYEQVCIIVDFGKGSKIMQTAKKHGISGGTILVGKGTVKNRLLEMLGINDIRKEIIILVSDKSTVHHAIEQLDKQFKFSKPNHGIVFTTSIYRVLGAKCMKETINEESGVNNTMYHAITVIVEKGNAELVIDAANEAGSKGGTIINARGSGIHETSKLFSMTIEPEKELVLILSEKESTENIISSIRSKLKIDEPGNGIIFIQDVNKTYGLYQ
>NZ_CP018866.1|WP_066410835.1|1204902_1206399_+|DUF1538-domain-containing-protein
MNVIVHKFKEVLYAVLPITFIVLLLNFTLAPLDNISMFIRFIIGSIFIIVGLSIFLFGVDIGITPIGQLMGKTIAKSNKVWIVLIAGLLLGFFISIAEPDLHILAGQVDFVTSGVISKSLIVVVVSIGIGALIALGLVRIVFNIPLYKILTVLYFIILVLAIYTSPEFLAISFDASGATTGALTVPFILALALGISSMKKDSKASEKDSFGLVAIASTGAIIAVLLMNIISKTEEITGGIEAQAEGTLSVIGPFLHEFPKITKEIIIALLPILIIFLVFQKISFKMSRKAVRKIVVGLVFTFIGLVLFLVGVNAGFMDVGREIGYSIASLDRKAYLIIVAFVLGLVTILAEPAVHVLTHQIEDVTSGYVRRNVVMFSLCIGVGLAVALSILRILIPELQLWHYLLPGYIIAIALTYIVPKLFVGIAFDSGGVASGPMTATFILAFVQGAAEAIEGANVLVDAFGMIAMVALTPLITLQIVGLIFKMKSKKVGLEKDVQ
>NZ_CP018866.1|WP_066410836.1|1203988_1204699_-|endonuclease/exonuclease/phosphatase-family-protein
MNVMTFNIHHGRGIDGKLDLRRIKDVIKSSRAEIIALNEVDKEFSFRSKYVDQALWLAENLQMNYVFGPTIHIKTKNRTRQYGNALLTRFPIESSCNHPFDFLPSFMENRGLLEVHVNINGKVISCFVTHLSFAPFLHQQQARFVLSKVRETDQPTILMGDWNMRPSSKSYSEVTQHLVDAKSSDGLDYTFPSKRPKVKLDYIFVSDGIKVIHAAAYTFNVLASDHLPFVAEMDVL
>NZ_CP018866.1|WP_066410838.1|1202930_1203839_+|malonate-transporter
MNQEFFYIIAIIALGYVLKRLKVIEEKEGQVIAKIIFRITLPALVIVTFNSVKIEPTLMILPVIVLLYGLLLTPLGLLVFKNEERELKGSFMMMASGLNVGLFAFPLVFAIWGMNGLTYFSMFDVGTSLMVFGIAFILGSYFSKEGLSLNPIEILKRLGTSIPLMTYIIASTLNFINIQLPTMVIDVASTISAANVPLSLLLLGIYLNFKIEKQFIKPLIKFLSFKYGTGLLVGLSLFYLLPYDDMFRYTLLIGFLLPVATSSLAFAVEFKYSTEATRLIATTANITIIISIVMLYFFANYI
>NZ_CP018866.1|WP_066410840.1|1201384_1202491_-|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTTKTLISAPFRADHVGSLLRPESIHKARKDFQEGTITSQQLREIETEEIKKVVDKQIEVGLQAVTDGEFRRRFWHTDFLEHLNGVEGYVPDHGFKFKDVETERYDVRVVGKISFNPDHPHVKDFIEFKEIVGDRAVAKQTIPSPNQLFNAGIRNLDIYPDIEEYANDIIQAYRDAIKAFYDAGCRYLQLDDVYIAGLNAPEIPFNDSGYSREELIALALRVANGVLEDKPEDLIVTTHLCRGNYRSTWAFEGSYAKIAPTLFAKEKVNGFFLEYDDDRSGDFQPLEHIPNGGPQVVLGVFTSKHGTLEDKENIKARVEEATKFVPLEQLCISPQCGFASTHHGNILTEEEQWAKLKYIVDISKEIWG
>NZ_CP018866.1|WP_066410823.1|1210849_1212160_+|MFS-transporter
MDDSLKLKKATYHLYTFMISKMVSTFGAQVYTFAISFYILQLTGSATSFATNLICNILPRTILSPFAGAITDRYSKKKIVILSQIATTLTIIILLGITLTSGLSLITIYITTAILSLTSMFSGIAFTSSITSLIDQNRIQKAMSLNQMAISFAAIGSPAVGGILYGTVSIPVFLLIYIGASIIAVILESTMNFKLFATEKQPVEGEQKESMWQSMKAGISYLKLQRVIMIMIWIGLLVNFLFGAFEVGYSYILIEKLKMESQHFGLTQGAFSLGMLVMSIYFSMRKEVRFPLLVSKRGIIGLGLILASITVPLLIPMSYFVQVGFYMLIMLAFGGMIIVVNTPLQVMLQKTIADEYKGRVFSILETMSMALMPLGMVLYGFLYDILPAHWVLIVSAAMLIIVILSMARPTVVKKAHPEWEGKGFSFVKSKVKSVSS
>NZ_CP018866.1|WP_066410821.1|1212317_1213742_+|serine-hydrolase
MKSQVVMNEFETFAERLAKKYQIPGIAIGLAHNGKVVYEKGFGHRNVEKELPVTMDTVFGIASVTKSFTCMAVMILQEQGKLSVHDPVVKYLPEFSTKTDATDKMTIHHFMTHSAGLPPLPSLFYAKKRSFDQDPSVKDYPGLSFPEDDNQGPIDTYEQLMDFIGRLDMELIGEPGTQFSYSNDSYALLGTIVQRVSGSTFEQFVKEYILDPCGMEHTCFEIDELEDYDNITSLYAARKVENGYEVYEAPVWWESPSMRGAGALKSTVNDMLKYAELIRTKGKVGNKRILSEKSVEQMITPYIECSPGRYYGYGFMITPNYHGSTLVEHGGNLKAVASQLCIIPEKEITGMILTNLAGVPAVTIMGGALNSLEGRAVEATPFSTTKYEVVQEELRDYQGTYTSNEGMSISINVKNEGLDFSTQGTSFPIQCVGKDLFLAIVKDQVELIRFVRDESGNIERVAYHMRQFPKNEIG
>NZ_CP018866.1|WP_066410819.1|1213795_1214500_+|hypothetical-protein
MKVLRTNLIYNEQVPCSDGTYVNLYELNVTVQLQKEEFYFFFTIDEGSTSWGHSLLIDSLGNERPGLLSPQQFQTIFSGPKVTNLVKQVEEKMGIKSTLVSFPEEQFTGYDYVAFYNLCKSIARDLRVKSHIITYEELGICSYQAVKLSLRDGPIYILCNNYDVAFTRELEGYPIKFVDVSMLAHYFSLPYKVCSVEELNRPFEITRPLSDWERYSINYWKPQTQGDFLFNYWD
>NZ_CP018866.1|WP_066410817.1|1214822_1216151_+|CitMHS-family-transporter
MLSIIGFATILTIVILLLKGRISPIIGLVLVPIIGALIAGFGIAEIGGFFSEGIDKVINVVIMFIFAILFFGIMQDAGLFDPIINKMIAITRGNVVAVAVGTVFIAAIAHLDGSGASTFLITIPALLPLYKRLKMSPYLLLLLVGTSASILNMLPWAGPLGRTAAVLGLDPTELWRPLIPLQIIGLFLLTCMALILGIREKRRIALLRETESSQDEVAAAQEYAESSYQKEKDISLARPKLLWVNLLLTLGMIGMLVWGIIPAGFIFMIFLSIALLLNYPKVDDQMARIKAHAPNALLMASIILAAGSFLGILGGTGMLNSIAVDMVRILPAFIVPYLHLIIGAFGVPFELILNTDAYYFALLPVVEQIVVTYGVESVTAAYSMIIGNIIGTFVSPFSPALWLALGLAGCEMGKHIRYSIFWVWGFSLVLMVVAIVLGIIAL
>NZ_CP018866.1|WP_066410815.1|1216214_1216919_-|response-regulator
MTNAFGVLIIEDDFRVANINKELVEKVEGFHVTGIANTKKDALSFLNNSIIIPNLILLDVYIPDVDGLDLMWELKQNYPSIDIIMITAAKEVDTIQQTIRSGVLDYIIKPLDAERLRQTLERYKEKQLTFSSKREISQEELDLLRGLAISSQDKEKIIGPPKGIDPITLEKILAVLIEKDDNTNGYTAAEVGACIGASRSTARRYLEYLVSLKQVSAELIYGDVGRPERRYRIN
>NZ_CP018866.1|WP_084380067.1|1216911_1218570_-|sensor-histidine-kinase
MKQINREFPFFKLPTLRPTLLVKIIVLICLLNILVLMLFGIYTNNKYTQTMEEQIGIRALHIAQIISENQEVKAAFNKENPSEVIQPIVERIRKTTDSQFIVVGNIEGERYSHPLPDRIGETMVGEDNERAILDGESYISKATGSLGPSIRGKAPIISSTGDIIGVVSVGYLIEDINMSISMYIADIWYWLILSIVIGIIGAILISLHVKKSILGLEPEEIGQLYGEREAIFQSIHEALIAVDKDGMVTMYNQKAGKILQSESEYIVGKSITNLLANKSLNLVLKTGKSQYHQEIWIKDDRFIINSVPLFYDKKVIGAVYTFRNQTEIEKLSEELSKVKQYSEALRVQTHEFSNKLNTISGLLQLDKKDEAIAFINKETKQQQEWIHFFINNVEDPYISAILLGKLNQAHELGITLSIDPNSQLTSTLSLKLREGVITAIGNLLNNAYDAVLEHNTKKEVGIFFTDIGNEIIFEIEDSGAGIPHEITQNIFQRGFSTKSGLHRGIGLALIHKILQELNGNISLETSDLGGACFIIAIPKAQRGNMFGGDNLD
>NZ_CP018866.1|WP_066410812.1|1218819_1220649_+|EAL-domain-containing-protein
MNSEYWKPSVRIIAIYFIISLIWIFVSELLLDQYIHKNAHFQAHFFSILKGCLFIVVTSWIFYKLIDRDFRYIRESEERYRKLVENSAEVIFVHLDGVIVYVNQAGINFIGAKNASDIIGKHLLDFVPLEDYDYTISRMKKVKELAEQRILTPSGQKIPIETIAFKTTFHGKEAIQVIMRDITERKIAAEQINYLAYYDSITTLPNRNALNKFLQEAIEKSESFALMLLDLDRFKYINDNLGHDAGDILLKQVSKRLKGFLGNKAFLSRYGGDEFVLLLKDIDEEKVKRVASGIIEKLSYPFILEKNEYYITSSIGICMYPRDGEHADVLLKNTDTAMYAAKERGRNAYRFFDDNMDVQYKKKLEFEQGIRRGLKNGEFQLFYQPQVNLSTDKIIGLEALIRWQHPTKGLIPPNEFIPIAEETGLIVELGDWVLETACKQLEFWQLKGLPSIRIAVNVSIHQFLNENFVNRVDHILYETGLPSNLLELEITENVMRNHEKSIEIMKRLGIEIALDDFGTGYSSLSVLKSLPIDNLKIDKSFIDDICTEDDQIVKSIIQMGKNLNFTLVAEGIENKEQLQLLKKYKCHIGQGFCFCKPLPADEIEKFLKK
>NZ_CP018866.1|WP_066410810.1|1221417_1224615_-|DEAD/DEAH-box-helicase
MNINLIDDLLDSFSPSTYDRGLGYYYNNNVYKLEFVGEINSWVASVAGSSNYHVTITTYGDFSCTCKAFEKYEECKHIAATLFEIEDLVEENHINQKEINASTNFNISENMISALSPLALFNENILNEENSTPLKIQFHLKLHPSRWSREYFSISIKVGEDRLYVVKDITEFLQSINDNEELSFTNFFTYDPSKHVFSNEDQPVMDLLCDIWKSEEFIRENNNHYVSTSNNKEIKIPPSFLQRLLILLQNCDFQFLNNGKKYTNTVLEEEKKPFYFPIKIVNDEVSLDIRPISIYDYLSEYKLIVIDNEFYPLNKETEQIVNQLFQLLNRHNNDFVPINKANLDKFFAHVVPSLKKIGEVVVEDSITNQLLQTPLEIKIFLDYEEDYLLFKCELHYGEHIFDPFEIKDNSIEVNGQKIVRDLEKERLLIEALNQSKLATDGEDIFISKDDHIYHFLFSTLPKYEQFATVYLTDRVKSIIYQPKIDFSFDVQFKENESLLDIEFELSGIEPNDVKHVMASIKEKKRYHRLSNGSFIQLNEGLSELEEIYEKLGDLGKISDNKLSVPSYRAMQVESLLTEKTVDQKTYNEAFQQLVQQLKNPESLTITVPHSLQAELRDYQLVGYKWLKTLSTFGFGGILADDMGLGKTLQSITYLLAERLENPDSQPALVVTPSSLVYNWKYELERFAPSLKIAVVSGTKAERKETFTSDKDIDVYITSYPLIRQDSNEWNAREFSILLLDEAQAIKNDTTKIAKTIKSLQAAKKFALSGTPIENSLNELWSIFDCILPGFFPTKKKFQSLDHEKIAMLTKPFILRRLKTDVLHELPEKIESVQLSELTKEQKQLYLAYLEKIRGETKDALSNEGFQKSRMKILAGLTRLRQICCHPSLFLENYEGDSSKLSQLMEMVQNSIENGQRILLFSQFSSMLQIIKTELDRNEIDSFYLDGSTPSKDRVEMANAFNNGERNVFLISLKAGGTGLNLTGADTVILYDLWWNPAVEEQAAARAHRMGQKKVVQVFRLITEGTIEEKIYKLQQKKKELVDAIIQPGEANFSSLSEKEILELLS
>NZ_CP018866.1|WP_066410808.1|1224757_1225234_+|hypothetical-protein
MKNAISLRELVEEMDTQSEDDKSFINRETGKIIIIETSILRRIEEEEIEAETNVGGESLYIEALDIIENDEKYEVIPSQWDINEYEMMEDFISSMESPKVRDRLYGVIKGKGAFRRFKDMIIKLDVEQQWYLYKDQRLKEIAIKFCEMYDINYIDDMK
>NZ_CP018866.1|WP_066410805.1|1225252_1225612_+|hypothetical-protein
MNRQQLLTKMKKVINTQCHKNNYVSFTEVLLGMGKLANEDYESWCTGKVYYLERLVKGNLGQLNYLLKEYHKHCLQLGWNPSITIYKKWGKGHKPTLRFSKSGLDHIEKAYSTHYVKKE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26326 : 36187

Synechococcus_phage(37.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066417270.1\|26326_27619_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	7.7e-19	26.0
WP_066417321.1\|27674_28394_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SE76	Cyanophage	1.1e-43	42.2
WP_066417269.1\|28386_28641_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FKD5	Synechococcus_phage	3.6e-05	35.8
WP_066417268.1\|28637_29324_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_066417267.1\|29307_31533_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.8e-167	42.8
WP_066417263.1\|31508_32921_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	1.2e-49	30.7
WP_066417261.1\|33036_34077_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	5.3e-71	44.7
WP_066417259.1\|34073_34661_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.5e-27	37.0
WP_066417257.1\|34657_36187_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.4e-73	49.0

DBSCAN-SWA_2

508208 : 560534

uncultured_Caudovirales_phage(33.33%)

tRNA,transposase,integrase,coat

attL 503505:503520|attR 517059:517074

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
503505:503520	attL	NA	NA	NA	NA
WP_094366035.1\|508208_509384_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_066422025.1\|509770_510070_+	DUF3817 domain-containing protein	NA	NA	NA	NA
WP_066422016.1\|510258_511305_+	serine hydrolase	NA	NA	NA	NA
WP_094366037.1\|511587_513021_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_066418131.1\|513643_514120_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_066418134.1\|514157_515507_-	DUF4179 domain-containing protein	NA	NA	NA	NA
WP_066418136.1\|515481_516015_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_066418138.1\|516235_517768_+	sodium:proton exchanger	NA	NA	NA	NA
517059:517074	attR	NA	NA	NA	NA
WP_066418140.1\|517790_518498_-	metallophosphoesterase	A0A127AVW0	Bacillus_phage	3.5e-34	39.1
WP_094366260.1\|518932_520015_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-22	34.9
WP_066418145.1\|520011_520902_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_066418148.1\|520919_521741_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_066418151.1\|521828_522503_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_066418155.1\|523230_524619_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_066418157.1\|524959_526315_+	sodium-dependent transporter	NA	NA	NA	NA
WP_066418194.1\|526343_527981_+	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_066418159.1\|527998_529750_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-10	26.6
WP_066418162.1\|529809_530109_-\|coat	spore coat protein	NA	NA	NA	NA
WP_066418165.1\|530105_530312_-	hypothetical protein	NA	NA	NA	NA
WP_066418195.1\|530485_530713_+\|coat	spore coat protein	NA	NA	NA	NA
WP_066418172.1\|530723_531086_+\|coat	spore coat protein	NA	NA	NA	NA
WP_066418174.1\|532672_533317_+	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA
WP_066418176.1\|533449_534964_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_066418177.1\|534980_535913_-	LD-carboxypeptidase	NA	NA	NA	NA
WP_066418178.1\|536055_536919_-	hypothetical protein	NA	NA	NA	NA
WP_066418180.1\|537054_538335_+	hypothetical protein	Q8QKV7	Ectocarpus_siliculosus_virus	4.6e-08	24.2
WP_094366039.1\|538588_540082_-	glucuronide permease	NA	NA	NA	NA
WP_066418185.1\|540502_540820_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_066418186.1\|540933_542484_-	alkaline phosphatase family protein	NA	NA	NA	NA
WP_066418188.1\|542644_543256_-	LysE family translocator	NA	NA	NA	NA
WP_066418193.1\|543421_545122_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.8e-08	23.0
WP_066421879.1\|545532_546441_-	hypothetical protein	NA	NA	NA	NA
WP_066421882.1\|546579_547323_+	DUF3784 domain-containing protein	NA	NA	NA	NA
WP_066421884.1\|547462_549157_+	EAL domain-containing protein	NA	NA	NA	NA
WP_066421887.1\|549349_550516_+	TraB/GumN family protein	NA	NA	NA	NA
WP_066422037.1\|550859_552248_+	protoporphyrinogen oxidase	A0A2K9L5D8	Tupanvirus	1.2e-12	25.3
WP_066421758.1\|552651_553098_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_066421760.1\|553097_554495_+	MATE family efflux transporter	NA	NA	NA	NA
WP_066421763.1\|554543_555407_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_066421770.1\|555590_557135_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_066421773.1\|557256_557781_+	hypothetical protein	NA	NA	NA	NA
WP_066421776.1\|557859_558009_-	BH0509 family protein	NA	NA	NA	NA
WP_066421779.1\|558173_558779_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_066422047.1\|559310_560534_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

2742067 : 2750080

Ostreococcus_lucimarinus_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_084380461.1\|2742067_2743156_-	3-dehydroquinate synthase	E5ERI4	Ostreococcus_lucimarinus_virus	2.1e-22	28.1
WP_066416868.1\|2743139_2744312_-	chorismate synthase	A0A291AU41	Pandoravirus	3.4e-42	35.9
WP_066416870.1\|2744469_2745246_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_066416872.1\|2745384_2745831_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.7e-29	46.6
WP_066416874.1\|2745941_2746904_-	heptaprenyl diphosphate synthase component II	A0A1V0SE37	Indivirus	1.2e-11	28.1
WP_066416877.1\|2746919_2747633_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_157729283.1\|2747639_2748434_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_066416883.1\|2748876_2749098_-	trp RNA-binding attenuation protein MtrB	NA	NA	NA	NA
WP_066416885.1\|2749113_2749680_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	9.1e-49	55.7
WP_066416887.1\|2749807_2750080_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	3.5e-30	80.0

DBSCAN-SWA_4

2793248 : 2804331

Staphylococcus_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066418593.1\|2793248_2794415_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.7e-20	27.2
WP_094366321.1\|2794698_2795589_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	3.9e-38	42.8
WP_066418598.1\|2795674_2795983_-	hypothetical protein	NA	NA	NA	NA
WP_066418633.1\|2796168_2796645_-	YpuI family protein	NA	NA	NA	NA
WP_066418601.1\|2796730_2797159_-	hypothetical protein	NA	NA	NA	NA
WP_066418603.1\|2797228_2797810_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.9e-15	33.0
WP_066418605.1\|2797796_2798573_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.1e-07	25.5
WP_066418607.1\|2798751_2799273_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_066418609.1\|2799344_2799689_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_066418615.1\|2799836_2800301_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.0e-45	61.3
WP_066418617.1\|2800367_2801570_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.7e-119	55.1
WP_066418622.1\|2801583_2802237_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.1e-45	50.0
WP_066418625.1\|2802240_2803338_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	6.7e-64	41.0
WP_066418631.1\|2803893_2804331_-	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	2.1e-16	45.2

DBSCAN-SWA_5

3565505 : 3589371

Bacillus_phage(47.62%)

portal,terminase,tail,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066412471.1\|3565505_3566339_-	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	5.2e-53	48.0
WP_066412469.1\|3566458_3566701_-	hypothetical protein	A0A0S2SXN3	Bacillus_phage	1.7e-17	59.7
WP_066412468.1\|3566727_3566910_-	hemolysin XhlA family protein	NA	NA	NA	NA
WP_066412467.1\|3566953_3567175_-	hypothetical protein	NA	NA	NA	NA
WP_084380206.1\|3567171_3567585_-	DUF1617 family protein	A0A0K2FLF1	Brevibacillus_phage	1.0e-12	33.3
WP_066412465.1\|3567607_3571192_-\|tail	phage tail protein	A0A142F1N2	Bacillus_phage	9.6e-128	57.7
WP_066412462.1\|3571208_3572627_-\|tail	phage tail family protein	A0A1B1P894	Bacillus_phage	9.8e-76	34.4
WP_066412460.1\|3572626_3574945_-	tape measure protein	A0A1X9IGH8	Lactococcus_phage	3.5e-46	36.3
WP_084380204.1\|3574999_3575113_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_066412459.1\|3575177_3575714_-	SHOCT domain-containing protein	NA	NA	NA	NA
WP_066412458.1\|3575774_3576170_-	hypothetical protein	A0A2H4JH35	uncultured_Caudovirales_phage	4.3e-05	27.7
WP_066412456.1\|3576170_3576770_-	hypothetical protein	A0A059T7W8	Listeria_phage	1.9e-25	36.7
WP_066412453.1\|3576784_3577216_-\|capsid	capsid protein	O03972	Lactobacillus_phage	7.2e-30	45.3
WP_066412450.1\|3577222_3577630_-	hypothetical protein	NA	NA	NA	NA
WP_066412448.1\|3577626_3577983_-\|capsid	minor capsid protein	I1TLE6	Bacillus_phage	4.5e-22	47.5
WP_066412445.1\|3577982_3578321_-	hypothetical protein	I1TLE5	Bacillus_phage	7.6e-11	37.4
WP_066412444.1\|3578310_3578715_-	hypothetical protein	I1TLE4	Bacillus_phage	1.9e-16	42.2
WP_094366163.1\|3578717_3579038_-	hypothetical protein	A0A1B1P891	Bacillus_phage	4.7e-10	59.6
WP_066412440.1\|3579804_3580164_-	HNH endonuclease	R9ZVU4	Cellulophaga_phage	9.0e-10	43.9
WP_084380198.1\|3580242_3580386_-	hypothetical protein	NA	NA	NA	NA
WP_066412512.1\|3580892_3581585_-	hypothetical protein	B3GW02	Streptococcus_phage	9.8e-29	46.6
WP_066412436.1\|3581682_3582063_-	hypothetical protein	NA	NA	NA	NA
WP_066412432.1\|3582161_3583313_-\|capsid	minor capsid protein	A0A1B1P858	Bacillus_phage	6.2e-105	52.7
WP_066412429.1\|3583309_3584803_-\|portal	phage portal protein	A0A1B1P863	Bacillus_phage	8.2e-174	65.1
WP_094366165.1\|3584829_3586131_-\|terminase	PBSX family phage terminase large subunit	D2XPX9	Bacillus_virus	2.1e-189	74.2
WP_084380196.1\|3586120_3586945_-	hypothetical protein	A0A1L2JY44	Aeribacillus_phage	5.2e-69	60.5
WP_066412426.1\|3587027_3587588_-	hypothetical protein	NA	NA	NA	NA
WP_157076592.1\|3587684_3587834_+	hypothetical protein	NA	NA	NA	NA
WP_066412423.1\|3587958_3588876_-	NERD domain-containing protein	A0A1L2JY40	Aeribacillus_phage	5.6e-32	31.6
WP_066412420.1\|3588936_3589371_-	hypothetical protein	A0A290FZR5	Caldibacillus_phage	9.1e-41	60.6

DBSCAN-SWA_6

3594300 : 3610168

Bacillus_phage(28.57%)

integrase

attL 3602107:3602121|attR 3618030:3618044

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066412397.1\|3594300_3594765_-	hypothetical protein	A0A288WG06	Bacillus_phage	8.8e-26	40.9
WP_094366167.1\|3594936_3595347_-	RusA family crossover junction endodeoxyribonuclease	M4ZS69	Bacillus_phage	5.2e-38	61.1
WP_066412394.1\|3595336_3595939_-	hypothetical protein	A0A2H4J260	uncultured_Caudovirales_phage	6.3e-24	37.3
WP_157076589.1\|3595959_3596115_-	hypothetical protein	NA	NA	NA	NA
WP_066412392.1\|3596115_3596304_-	Fur-regulated basic protein FbpA	A0A0S2SXY0	Bacillus_phage	9.7e-08	59.2
WP_066412390.1\|3596313_3597117_-	ATP-binding protein	A0A0K2CPA5	Brevibacillus_phage	3.7e-64	55.7
WP_066412379.1\|3597970_3598156_-	hypothetical protein	NA	NA	NA	NA
WP_066412376.1\|3598145_3598847_-	MBL fold metallo-hydrolase	A0A1L2JY21	Aeribacillus_phage	1.5e-98	72.1
WP_084380190.1\|3598846_3599773_-	recombinase RecT	D7RWF9	Brochothrix_phage	2.2e-84	58.2
WP_066412374.1\|3599778_3599982_-	hypothetical protein	NA	NA	NA	NA
WP_066412371.1\|3599972_3601961_-	AAA family ATPase	A0A1L2K2K3	Aeribacillus_phage	2.2e-222	61.4
WP_157076588.1\|3601957_3602125_-	hypothetical protein	NA	NA	NA	NA
3602107:3602121	attL	NA	NA	NA	NA
WP_066412368.1\|3602542_3602818_-	hypothetical protein	NA	NA	NA	NA
WP_066412365.1\|3602808_3603072_-	helix-turn-helix transcriptional regulator	S5MNZ7	Brevibacillus_phage	5.5e-09	45.8
WP_084380186.1\|3603205_3603904_-	Rha family transcriptional regulator	A0A1B1P7T7	Bacillus_phage	3.1e-38	38.4
WP_066412363.1\|3604257_3604449_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157076586.1\|3604461_3604608_-	hypothetical protein	NA	NA	NA	NA
WP_066412361.1\|3604675_3604954_+	hypothetical protein	M9Q2L4	Clostridium_phage	2.5e-07	37.9
WP_066412359.1\|3604955_3605156_-	hypothetical protein	NA	NA	NA	NA
WP_066412357.1\|3605207_3605486_+	hypothetical protein	NA	NA	NA	NA
WP_066412354.1\|3605496_3605730_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_066412352.1\|3605891_3606317_+	helix-turn-helix transcriptional regulator	A0A1L2JY18	Aeribacillus_phage	1.1e-22	47.7
WP_066412349.1\|3606368_3606950_+	ImmA/IrrE family metallo-endopeptidase	A0A1L2JY13	Aeribacillus_phage	4.6e-72	67.2
WP_066412346.1\|3607017_3608016_+	hypothetical protein	NA	NA	NA	NA
WP_066412344.1\|3607985_3608858_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_066412342.1\|3608971_3610168_+\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	2.6e-101	50.6
3618030:3618044	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3741047 : 3798351

Lactococcus_phage(20.0%)

integrase,transposase,protease,coat

attL 3752324:3752338|attR 3802666:3802680

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_066420631.1\|3741047_3741380_+\|coat	spore coat protein	NA	NA	NA	NA
WP_066420630.1\|3741477_3741729_-	YusU family protein	NA	NA	NA	NA
WP_066420628.1\|3741744_3742479_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_066420626.1\|3742475_3743285_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.1e-10	23.6
WP_066420624.1\|3743303_3744356_-	iron ABC transporter permease	NA	NA	NA	NA
WP_066420623.1\|3744352_3745357_-	iron ABC transporter permease	NA	NA	NA	NA
WP_066420622.1\|3745522_3746482_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_084380775.1\|3747122_3748067_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_066421875.1\|3748108_3751489_-	5'-nucleotidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_066421872.1\|3751737_3751935_+	hypothetical protein	NA	NA	NA	NA
WP_066417822.1\|3752183_3752939_-	(S)-benzoin forming benzil reductase	NA	NA	NA	NA
3752324:3752338	attL	NA	NA	NA	NA
WP_066417825.1\|3752935_3753412_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_084380510.1\|3753812_3755102_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-55	33.1
WP_066417832.1\|3755210_3755921_-	hypothetical protein	NA	NA	NA	NA
WP_066417835.1\|3755928_3756501_-	hypothetical protein	NA	NA	NA	NA
WP_066417838.1\|3756490_3756985_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_066417841.1\|3757115_3757667_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_066417843.1\|3757685_3758045_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_066417845.1\|3758064_3758544_-	DsrE/DsrF/DrsH-like family protein	NA	NA	NA	NA
WP_066417848.1\|3758560_3758788_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_066417849.1\|3758911_3759172_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA
WP_157729288.1\|3759309_3760101_-	polysaccharide deacetylase family protein	A0A2K9L357	Tupanvirus	5.0e-05	25.0
WP_084380512.1\|3760311_3761481_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA
WP_066417851.1\|3761607_3762435_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_066417852.1\|3762466_3763558_-	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_066417855.1\|3763632_3764877_-	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9V7Y5	Bandra_megavirus	5.7e-11	27.8
WP_066417857.1\|3765106_3765997_+	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	1.9e-24	31.5
WP_066417859.1\|3766357_3766723_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_066417861.1\|3766772_3767522_-	GTP cyclohydrolase II	NA	NA	NA	NA
WP_066417863.1\|3767619_3768222_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_066417866.1\|3768409_3769147_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.6e-21	31.7
WP_066417901.1\|3769844_3770216_-	hypothetical protein	NA	NA	NA	NA
WP_066417869.1\|3770381_3770930_-	helicase	NA	NA	NA	NA
WP_066417903.1\|3771060_3772800_-	hypothetical protein	NA	NA	NA	NA
WP_066417906.1\|3773264_3775028_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-27	28.0
WP_066417874.1\|3776081_3776930_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_066417876.1\|3777260_3777584_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_066417878.1\|3778428_3778770_-	hypothetical protein	NA	NA	NA	NA
WP_157729289.1\|3778940_3779114_+	hypothetical protein	NA	NA	NA	NA
WP_066417881.1\|3779091_3780381_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	5.8e-43	31.4
WP_066417888.1\|3780373_3781141_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.3e-53	42.7
WP_066417896.1\|3781142_3781460_+	hypothetical protein	NA	NA	NA	NA
WP_066417899.1\|3783007_3783235_-	hypothetical protein	NA	NA	NA	NA
WP_094366177.1\|3784248_3784527_-	hypothetical protein	NA	NA	NA	NA
WP_094366179.1\|3784713_3784992_-	hypothetical protein	NA	NA	NA	NA
WP_157076672.1\|3786352_3786790_-	hypothetical protein	NA	NA	NA	NA
WP_066418058.1\|3787056_3789606_-	ABC transporter permease	NA	NA	NA	NA
WP_066418061.1\|3789586_3790489_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.7e-26	33.5
WP_066418063.1\|3790820_3791126_-	hypothetical protein	NA	NA	NA	NA
WP_084380526.1\|3791912_3792068_+\|transposase	PD-(D/E)XK nuclease family transposase	NA	NA	NA	NA
WP_066418065.1\|3792125_3792386_+	hypothetical protein	NA	NA	NA	NA
WP_066418066.1\|3792749_3793391_-	HD domain-containing protein	NA	NA	NA	NA
WP_066418067.1\|3793479_3794241_-	hypothetical protein	NA	NA	NA	NA
WP_066418068.1\|3794355_3794583_-	hypothetical protein	NA	NA	NA	NA
WP_066418070.1\|3794964_3795444_-	hypothetical protein	NA	NA	NA	NA
WP_066418078.1\|3795436_3798070_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_084380536.1\|3798261_3798351_-\|transposase	Mu transposase C-terminal domain-containing protein	NA	NA	NA	NA
3802666:3802680	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3838977 : 3846989

Streptococcus_phage(33.33%)

integrase

attL 3834621:3834634|attR 3843998:3844011

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3834621:3834634	attL	NA	NA	NA	NA
WP_066419488.1\|3838977_3839970_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LA05	Escherichia_phage	4.8e-13	26.6
WP_066419486.1\|3840314_3840686_-	hypothetical protein	NA	NA	NA	NA
WP_066419485.1\|3840962_3841547_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	5.7e-54	56.2
WP_094366183.1\|3841676_3841940_+	hypothetical protein	NA	NA	NA	NA
WP_066420749.1\|3841957_3842215_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_066420750.1\|3842246_3843188_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.6e-50	39.1
WP_066420752.1\|3843259_3844222_-	YvcK family protein	A1IMD5	Streptococcus_phage	3.1e-65	41.2
3843998:3844011	attR	NA	NA	NA	NA
WP_066420754.1\|3844221_3845112_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-05	29.8
WP_066420758.1\|3845161_3845626_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_066420761.1\|3846035_3846989_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.8e-89	54.2

DBSCAN-SWA_9

4066442 : 4131197

Staphylococcus_phage(28.57%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094366203.1\|4066442_4067618_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_066420586.1\|4067821_4069849_-	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	1.0e-70	29.7
WP_066420588.1\|4070000_4070462_-	hypothetical protein	NA	NA	NA	NA
WP_066420590.1\|4070451_4070943_-	hypothetical protein	NA	NA	NA	NA
WP_066420591.1\|4071121_4072180_-	D-xylose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_066420592.1\|4072193_4073726_-	response regulator	NA	NA	NA	NA
WP_066420593.1\|4073703_4075161_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.7e-25	31.3
WP_084380698.1\|4075157_4076138_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_066420597.1\|4076311_4077487_-	ABC transporter permease	NA	NA	NA	NA
WP_066420598.1\|4077499_4079020_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-17	29.7
WP_066420599.1\|4079145_4080255_-	sugar-binding protein	NA	NA	NA	NA
WP_066420600.1\|4080525_4081587_-	C39 family peptidase	NA	NA	NA	NA
WP_066420602.1\|4081966_4083412_+	hypothetical protein	NA	NA	NA	NA
WP_066422032.1\|4083543_4085019_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_066420428.1\|4085579_4085873_+	hypothetical protein	A0A0M4R382	Bacillus_phage	8.3e-30	65.6
WP_066420423.1\|4085897_4086746_-	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	1.0e-32	36.7
WP_066420421.1\|4086860_4087694_-	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_066420420.1\|4087707_4088163_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_066420417.1\|4088331_4090731_-	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_066420415.1\|4091209_4092571_-	hypothetical protein	NA	NA	NA	NA
WP_066420413.1\|4092808_4093855_-	lactonase family protein	NA	NA	NA	NA
WP_066420412.1\|4094077_4095307_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_066420410.1\|4096075_4097011_-	TraB/GumN family protein	NA	NA	NA	NA
WP_094366343.1\|4097424_4098405_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_066420406.1\|4098465_4100916_-	CotH kinase family protein	NA	NA	NA	NA
WP_066420404.1\|4101083_4101830_+	polyphosphate polymerase domain-containing protein	NA	NA	NA	NA
WP_066420403.1\|4101842_4102529_+	DUF4956 domain-containing protein	NA	NA	NA	NA
WP_066422032.1\|4102656_4104132_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_066420775.1\|4104324_4104645_+	hypothetical protein	NA	NA	NA	NA
WP_066420776.1\|4104861_4105404_+	hypothetical protein	A0A2I7SC66	Paenibacillus_phage	2.9e-20	45.8
WP_066420780.1\|4105503_4105992_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_066420781.1\|4106209_4107001_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_066420793.1\|4107019_4107727_-	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_066420782.1\|4107864_4109406_-	FGGY-family carbohydrate kinase	NA	NA	NA	NA
WP_066420783.1\|4109471_4110548_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_066420784.1\|4110628_4111591_-	ribose ABC transporter permease	NA	NA	NA	NA
WP_066420786.1\|4111587_4113084_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-21	32.4
WP_066420788.1\|4113170_4114121_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_066420789.1\|4114510_4115101_-	response regulator	NA	NA	NA	NA
WP_066420791.1\|4115389_4117237_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_094366205.1\|4117604_4118819_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_066417973.1\|4119072_4120269_+	amidohydrolase	NA	NA	NA	NA
WP_066417971.1\|4120269_4121568_+	amidohydrolase	NA	NA	NA	NA
WP_066417966.1\|4121605_4122871_+	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_066417964.1\|4122830_4124147_+	hypothetical protein	NA	NA	NA	NA
WP_066417975.1\|4124375_4125866_+	AbgT family transporter	NA	NA	NA	NA
WP_084380522.1\|4126236_4127055_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_066417955.1\|4127076_4127826_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_157729295.1\|4127828_4129118_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_066417950.1\|4129140_4130586_-	hypothetical protein	NA	NA	NA	NA
WP_066417948.1\|4130843_4131029_-\|bacteriocin	thiazolylpeptide-type bacteriocin	NA	NA	NA	NA
WP_084380520.1\|4131041_4131197_-\|bacteriocin	thiazolylpeptide-type bacteriocin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018866

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection