CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019985	Alkalihalobacillus clausii strain DSM 8716 chromosome, complete genome	10 crisprs	RT,csa3,cas3,DEDDh,WYL,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas14j,DinG	0	23	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019985_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_1

1077215-1077296

Orphan

Consensus_repeat	Method
ATTATTCAAATATTTATTTGAATG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP019985_1

>merge|NZ_CP019985|1|1077215-1077296|CRISPRCasFinder
ATTATTCAAATATTTATTTGAATGTAAGTGTATCGACAACGATGCGCTATGTCAATCTATTATTCAAACATTTATTTGAATG

>NZ_CP019985|1|1|1077215-1077296|CRISPRCasFinder
ATTATTCAAATATTTATTTGAATG	TAAGTGTATCGACAACGATGCGCTATGTCAATCT
ATTATTCAAACATTTATTTGAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094424236.1\|1079337_1081092_-\|BlaR1-family-beta-lactam-sensor/signal-transducer	unknown	unknown	gnl\|CDD\|225322
NZ_CP019985.1\|WP_179289872.1\|1082477_1083434_+\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl\|CDD\|235573
NZ_CP019985.1\|WP_094424238.1\|1083585_1084191_-\|ABC-2-transporter-permease	unknown	unknown	gnl\|CDD\|379133
NZ_CP019985.1\|WP_094424237.1\|1081267_1082173_+\|BCL-family-class-A-beta-lactamase	unknown	unknown	gnl\|CDD\|185339
NZ_CP019985.1\|WP_094424226.1\|1069020_1069875_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP019985.1\|WP_094424233.1\|1075055_1077185_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319845
NZ_CP019985.1\|WP_094424229.1\|1071985_1072756_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP019985.1\|WP_157730357.1\|1085850_1086066_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP019985.1\|WP_094424240.1\|1085054_1085426_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP019985.1\|WP_094424225.1\|1067514_1068921_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP019985.1\|WP_094424239.1\|1084183_1085050_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019985.1\|WP_094424230.1\|1072877_1073390_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094424234.1\|1078083_1078854_+\|aminoglycoside-O-nucleotidyltransferase-ANT(4')-Ib	unknown	unknown	gnl\|CDD\|285116
NZ_CP019985.1\|WP_062748944.1\|1077391_1077763_+\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP019985.1\|WP_169715998.1\|1073961_1075002_-\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|274942
NZ_CP019985.1\|WP_094424224.1\|1066899_1067514_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|173926
NZ_CP019985.1\|WP_094424231.1\|1073391_1073907_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP019985.1\|WP_094424235.1\|1078929_1079310_-\|penicillinase-repressor-BlaI	unknown	unknown	gnl\|CDD\|367747
NZ_CP019985.1\|WP_094424228.1\|1070635_1071625_-\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183592
NZ_CP019985.1\|WP_094424227.1\|1069897_1070578_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_179289872.1\|1082477_1083434_+\|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl\|CDD\|235573	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS.	1.66705e-107
NZ_CP019985.1\|WP_094424238.1\|1083585_1084191_-\|ABC-2-transporter-permease	gnl\|CDD\|379133	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.19378e-17
NZ_CP019985.1\|WP_094424237.1\|1081267_1082173_+\|BCL-family-class-A-beta-lactamase	gnl\|CDD\|185339	PRK15442, PRK15442, beta-lactamase TEM; Provisional.	9.90068e-64
NZ_CP019985.1\|WP_094424226.1\|1069020_1069875_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	8.89909e-20
NZ_CP019985.1\|WP_094424233.1\|1075055_1077185_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319845	cd07545, P-type_ATPase_Cd-like, P-type heavy metal-transporting ATPase, similar to Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase. CadA from gram-positive Staphylococcus aureus plasmid pI258 is required for full Cd(2+) and Zn(2+) resistance. This subfamily also includes CadA, from the gram-negative bacilli, Stenotrophomonas maltophilia D457R, which is a cadmium efflux pump acquired as part of a cluster of antibiotic and heavy metal resistance genes from gram-positive bacteria. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP019985.1\|WP_094424229.1\|1071985_1072756_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.5545e-20
NZ_CP019985.1\|WP_157730357.1\|1085850_1086066_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.2856e-05
NZ_CP019985.1\|WP_094424240.1\|1085054_1085426_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	1.09028e-41
NZ_CP019985.1\|WP_094424225.1\|1067514_1068921_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	8.05773e-112
NZ_CP019985.1\|WP_094424239.1\|1084183_1085050_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.31964e-76
NZ_CP019985.1\|WP_094424236.1\|1079337_1081092_-\|BlaR1-family-beta-lactam-sensor/signal-transducer	gnl\|CDD\|225322	COG2602, COG2602, Beta-lactamase class D [Defense mechanisms].	7.79158e-68
NZ_CP019985.1\|WP_094424234.1\|1078083_1078854_+\|aminoglycoside-O-nucleotidyltransferase-ANT(4')-Ib	gnl\|CDD\|285116	pfam07827, KNTase_C, KNTase C-terminal domain. Kanamycin nucleotidyltransferase (KNTase) is involved in conferring resistance to aminoglycoside antibiotics and catalyzes the transfer of a nucleoside monophosphate group from a nucleotide to kanamycin. This enzyme is dimeric with each subunit being composed of two domains. The C-terminal domain contains five alpha helices, four of which are organized into an up-and-down alpha helical bundle. Residues found in this domain may contribute to this enzyme's active site.	4.7564e-73
NZ_CP019985.1\|WP_062748944.1\|1077391_1077763_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	9.75243e-23
NZ_CP019985.1\|WP_169715998.1\|1073961_1075002_-\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|274942	TIGR04046, predicted_flavoprotein_involved_in_K+_transport, flavin-dependent oxidoreductase, MSMEG_0569 family. Members of this protein family belong to a conserved seven-gene biosynthetic cluster found sparsely in Cyanobacteria, Proteobacteria, and Actinobacteria. Distant homologies to characterized proteins suggest that members are enzymes dependent on a flavinoid cofactor.	2.27546e-77
NZ_CP019985.1\|WP_094424224.1\|1066899_1067514_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|173926	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.	1.20405e-07
NZ_CP019985.1\|WP_094424231.1\|1073391_1073907_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.38892e-17
NZ_CP019985.1\|WP_094424235.1\|1078929_1079310_-\|penicillinase-repressor-BlaI	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	4.81569e-36
NZ_CP019985.1\|WP_094424228.1\|1070635_1071625_-\|tryptophan--tRNA-ligase	gnl\|CDD\|183592	PRK12556, PRK12556, tryptophanyl-tRNA synthetase; Provisional.	0
NZ_CP019985.1\|WP_094424227.1\|1069897_1070578_-\|SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	0.00317988

>NZ_CP019985.1|WP_094424233.1|1075055_1077185_-|cadmium-translocating-P-type-ATPase
MGDEHASVYRVDGFTCANCAGKFEKNVKDLPGVKDAKVNFGASKLTVYGEATIEALEEAGAFEQLKVTKEPSRRQPFQYTQIPFYKKHRSILLSVLLLVFGYVFQFKYGESNIGTVGLFLTAILAGGFPLLKTGIRNVARLEFNMKTLMTVAVIGGAIIGEWGEVAVVVILFAISEALERFSMDRARKSIQSLMDIAPNEALIKRNGQEFTVHVGDIVVGDIMIVKPGQKIAMDGIVVHGHSSVNQAAITGESVPVEKAVDDEVFAGTLNEEGLLEIKVTKLVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPIIMVVAALVAIIPPLFTGGNWSTWVYQGLAVLVVGCPCALVISTPISIVSAIGNAAKKGVLVKGGVYLEEMASLKAIAFDKTGTLTKGIPVVTDFALLNPQLDQRQLFAIVAALENRSQHPLASAIVAKAEDEQLPYHDYMVENVTALTGKGITGTVNGKTYYVGSPKLFQERLPTWDITPFAQNIKSLQQQGKTAMLVGTETELLAIVAVADEVRPSSKEVIRKLHEAGIAKTVMLTGDNKQTAHAIGQAVGVADIQAELMPEDKLRFIKQWQENHGHVAMVGDGVNDAPALAAATVGIAMGGAGTDTALETADIALMGDDLKKLPFTVKLSRKTLNIIKANIAFAIAIKLAALLLVVPGWLTLWIAILSDMGATLLVALNSMRLIGVKE
>NZ_CP019985.1|WP_169715998.1|1073961_1075002_-|NAD(P)-binding-domain-containing-protein
MEYDVVVIGGGQAGLAVGYYLKKQKRPFLIVDEQNEAGDSWRKRYDSLVLFTPRCYSSLPGLAFSGDPNGYPTKDEMADYLWTYKETFQLPVAYKTKVERLEKKRDRFKVWTTSEGKTYDAKQVIIATGAFHTPFIPPLANSIHPGIAQLHASDYKGLEQIVAGPILIVGAGNTGVQIAAELVEHHDVILACGNKPNVLPQSVFGKNLFWWFDRLGLSKATINSVLGKWLQKRDPIIGNDFHTVRKRAKLKGRLINVTGSKAYFAEGSPVSVQTIIWATGYRNDYSWIDIDGVFDQEQKPIHVRGVTNVNGLFFVGLSWQYKRGSALVKGVGEDAAYIVSQLSKHS
>NZ_CP019985.1|WP_094424231.1|1073391_1073907_-|GNAT-family-N-acetyltransferase
MCISINRLQESDAEELHKFETDNRAFFEQMVPSRGEAYYQFETFKFRHGELLTEQDDTNSRFYLIRDERGNIVGRINLVAIDKPKRVAEVGFRVGENYVGKGIASNALKQLLETEKGFQTIKGKTTSNNIASQKTMENNGFKKVGISEEVFEFNGEKVMFVHYIWERTEIS
>NZ_CP019985.1|WP_094424230.1|1072877_1073390_-|hypothetical-protein
MDKYTLYQKTKNRYKPWPIKNVYDFFINTLKAQPLSLSDKDLKPFLIEHEIPERNKIGGIYGIYDSAITALLNGKVKSVNDMAFQQLAQKSIPLTNTDTILTIGSLVILETDDFETVSGCYIGGTINRLYNLVAFFAGLPEVDKTNFENYIIDDYLSSLADVKTIGFFEL
>NZ_CP019985.1|WP_094424229.1|1071985_1072756_-|class-I-SAM-dependent-methyltransferase
MIDFDNFEEYHDPLLYDQENGQHESEIPFLLKWAAKQKGLIIDLACGTGRATIPLAEKGFELVGVDVHKGMLNEARRKAARLPIEWVEQDCTNLNLPLKSKLIYCVGHSFQHFLTNEAQNQLLASVNRHLHSGGVFIFDTRFPSQEELLQPCTEEYWRTYVDRETSFTVDVYTVSEYDALKQIQHYTTIRKYKNNVGAIIKEKRSHIRLRYTFPQEMERLLTAYGFEIIHVYKDWDETVITNDSSEVVFVCKKREQ
>NZ_CP019985.1|WP_094424228.1|1070635_1071625_-|tryptophan--tRNA-ligase
MATRSLTGIKPTGEVHLGNYIGAIKPALAFTKQTGLESFYFIANAHGLTKITDSEEMRQLTRGIAATWLALGLDPEKSVFYRQSDVPEVFELSWILACVAPKGLLNRAHAYKAAIDENQAAGKEADAGVNMGLFTYPILMAADILLFQPDIVPVGRDQIQHIEIARDVARHFNHVFGDVFKQPRVHIEESVAVLPGLDGRKMSKSYGNTIPLFSEANELQRLVNRIKTDSLPPEAPKDPETSNLFTLYKEFAEPRQVEAMRARFAEGIGWGEVKKELYWAINEFMSEPRRRYNELLASPEVDRLLAEGAERARAYSQPFLQEIKKAVGL
>NZ_CP019985.1|WP_094424227.1|1069897_1070578_-|SAM-dependent-methyltransferase
MSLELDRVVFIGRTFAEYVAMFDLDTVKLQGRRILDCPAGACSFTKEAADLGIDATASDMAYQLSQATIRQKGLADLGHTIDKIKQAKKDYIWTNVADVPALAAQRKQALLLATEDMARRPERYVAAVLPKLPFANHTFDLVLSAHFLFTYSEQLDDAFHQSTLDELLRVAKEVRVFPLVSLDGKRSVHVDPLFKRLRQKGYTVTEKRVSYQFQKGADSVAIIRQQ
>NZ_CP019985.1|WP_094424226.1|1069020_1069875_+|EamA-family-transporter
MKLIFVYGTAVLLWASAFPAIRASLGYYSPEHLAALRLLIASAALLLFALAARIPLPKRKDMPAIFLLGFCGFSVYHGALSIGEKTVEAGTASLLVSTTPLFSTLLAALFMKERLHLKNGIAALIAFIGIGIIMLGSGASFHLQLGALIILVGAFGESIYFVFQRHLLPIYGFLPLTIYAILTGTLFMLAFTPGLGQVVLAAPSSVNWTVLYLGLFPTVIPYFCLAYATAKVGVSEATSTLFLTPVVALFLAWLWLGETPALLSLAGGALTLAGVAVAITGKQS
>NZ_CP019985.1|WP_094424225.1|1067514_1068921_-|PLP-dependent-aminotransferase-family-protein
MSIISGQRAKIAADIRAKIEAGEWYPTMKLPTQQELAAYYQVNRSTVIAALDRLKARGIIVSIQGKGSFVSNDSGNEEGVVWKELAKWSFYPKNKALVQHLNEWENDATLIQLSKGVLAHELQPKNAIKEALTAMAVQNVGFDYGDGRGDEGLRQALSVYLQEKGIQASPDSILIVSGALGGLQLIGTGILQTGSVLFHEPVSYLRSLTFFASLGIRTSPLDFAANHAKKELAKQSAHALYVNPTHHNPTGMTLDEGARRKLLLLAGKTRMPIIEDDIYGDLSFEEGPKPLKAYDRKGQVLYLGSFSKTVSPGFRIGWLVGPPDIVQKLADLRMQTDYGSSMLSQFVCRHLLETGTYRRHVWTLKEHLRERKDWLLGLLQKHFGELGSCGDVQGGFFIWFTFRKERAPHMQRFVTACHRRGVVIHPGFIYGEERQASIRFSFAFESLENMEKGLLQVRKAYDDQFVGE
>NZ_CP019985.1|WP_094424224.1|1066899_1067514_-|GNAT-family-N-acetyltransferase
MTVEVRTYVADDERDWLCLRVLAFMDTPYYDNVLQVKERYRNPAIELVCVEAGQLVGLIDVELDSDSRPVCSLKEGKGGMIWHIAVHPDYRKRSIASLLLAEVEKAAHAHSLDYLEAWTREDPAANQWYKRHLFRQHTSYLHVYMDAEEAKRNIHSHCQGITPVGVFAHYSGDRKEEVRNAFKRVHECRCYVKQLKGGSLDANA
>NZ_CP019985.1|WP_062748944.1|1077391_1077763_+|winged-helix-turn-helix-transcriptional-regulator
MNKKANDGDRCEVFCYDEQKVKRVQENVKKETFAPLSTMFKALADETRLKIAYALTTEQELCVCDVAHIIGSSTATASHHLRQLKQAGVAKSRKDGKWVFYSLQNPHIAAFIQYSFTQQKTSV
>NZ_CP019985.1|WP_094424234.1|1078083_1078854_+|aminoglycoside-O-nucleotidyltransferase-ANT(4')-Ib
MNMNGPASMSQKERLQTCHEIAKRLHEVYGNDVLAIGVYGSVSRGTDGPFSDIEMFCVLRDSTETVDKSYEWSAGPWKAEVDVCRASILLKEAATVEERWPLTHGPYFSPLRLYDPEGFFQRLRLAAESPTKEDFRQAIHEILVAEMYEYVGKLRNVNRNGPSSYLPSLALHFAHYGAMLIGLHNQTLFSTRAMVLPEALELPHRPKGFDHVAELAMSGNLAKPTKIVSACEDFWKGLVAWAAEHDYVIHSKRIPF
>NZ_CP019985.1|WP_094424235.1|1078929_1079310_-|penicillinase-repressor-BlaI
MSNQTPSISEAEWEVMKVLWKKGRQTANQVISAIQEQTDWKPKTIRTLLDRLTKKKVVGVDKEQKIYVFFPLYSEEECKHAEAQSFVKRVYGGTVKPLLVQFLEEESLTKEELDELYAILEQKRKE
>NZ_CP019985.1|WP_094424236.1|1079337_1081092_-|BlaR1-family-beta-lactam-sensor/signal-transducer
MTLPHILLSLILITATILVIFFARAVFYKQLSAKWRYQLWFLLITVLTLPFIPIHLLTGLSFFDQGRQQTTYSSSERFGFTDQNEQWMVDFGTSVSRFDYTFLHTAVVSIWITGMIFFLLLTLYHYAKLQRLVKAASRIQNQKIQKAFSDCMAELQITNKLTILESPAIQTPMTFGLLKTYILLPKNIELYLSDDEIRHVLLHELHHYKSKHIKVNYIFVVYQIVYWFHPLVWKAFKEMRLDRELACDTEVLLTLGQREYKTYGQTIMRFLERNSRFLHLTNQLHSSKKALKIRILNIASFTGESKRRQLKSMVVFAVLTVFVIAQFPFLTATAVSTERYQFDDSQAIVEDYSTHFAGNEGSFVLYSLNSDQFEIYNKEKSVRRVSPNSSYKIYTALMALELGVIGRDDSWLEWDGVEYEDEAWNSGQDLKSAMSQSVTWYFQELDERIKQRNIQSFVNQLDYGNKDLSGGLNHYWLESSLKISPVEQVELLHSFYTNQLDFKEEHVQFVKEVMKLEQNQKGTLYGKTGTGIVNGHAINGWFIGFVETETDTYFFATNIQQQDHAYGSTAAEITLSILSSKGIY
>NZ_CP019985.1|WP_094424237.1|1081267_1082173_+|BCL-family-class-A-beta-lactamase
MLKTKMTSSILVGACLLFGCSNGNEQPVSNEPEPEESVETGEAVFKALEEEYAARLGVFALDTGTGQTVSYRADERFTYASAHKPLAVGVLLQQKSIEELEQLITYSADDLVNYNPITENHVETGMTLRELSDASIRYSDNTAANLIFDEIGGPEGFKEGLRAMGDTVTEPERIEPELNNVEPGEIQDTSTPEALAKSLQEFTLGEALPADKQELLIDWLIGNTTGDALIRAGVPEGWEVGDKTGAGSYGTRNDIAILWPPEKEPIILAILSSKDEKDAEYDDELIAKATEEVINLLTQTE
>NZ_CP019985.1|WP_179289872.1|1082477_1083434_+|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MNQLRGRFAPTPSGELHLGNLYVALLSWLQVRQGGGQFILRIEDIDRPRSRNELVGPMMDDLHWLGLDWDEGPDQGGENGPYYQSKRLHLYEEALHNLQKQQLLYHCYCSRAELQAVASAPHGVASEGQAYPGTCKRLTAAERAAKAAKKTPSLRFAVDKWPTAEKMDLEMEKLLRRGGDFVVQRADGIISYQLAVVVDDALMGITDVLRGQDLYDSTPRQLLLYAALGYTAPRFAHVPLLYGPDGRRLAKRHRDLSLAAIRANGCRPEDIVGLLAALSGLIERQEPLTAAELIPEFRLEKLTTEPILLDTHMLQLLN
>NZ_CP019985.1|WP_094424238.1|1083585_1084191_-|ABC-2-transporter-permease
MFNLIKRDLILQKRQLIVYLPFILFFIIMDAHPVLIFLVASIFIPFNTHAYDEKAETNILLNSLPYTRTEIIASRYIGAIVYMGLAIVITSLALFVFNKPFTMADIAMGSGLFLLFVSFTFPLFYIFKPGFISIVVLISFFLFVGIGPSIVISLAEQLSAVTDFVVHLSVPALYSGAALIILAVYVLSWGITHVIYQRKVF
>NZ_CP019985.1|WP_094424239.1|1084183_1085050_-|ABC-transporter-ATP-binding-protein
MEHVIELKNVTKTFKDFSINDVDLQVKQGFVTGFIGANGAGKSTVLKIMMNLLKPDAGEVKVFGLDYKTHEKAIKDRIGFVYDANVFFEGLNLKDIKRIVAPAYKRWDDTSFYQYVNQFELPLNKAIKTFSKGMQMKASLAIALSHHAELIIMDEPTAGLDPIFRRELLDLLQELMIDGNRTIFFSTHITTDLDRIADYIAFIRRGKLVFNKSIHDIAENYALVKGRNELLDRDTEKAFVHTHRAATGFEALTDNIEAVNDIFGDTVVIERASLEDIMYYLKEGTHDV
>NZ_CP019985.1|WP_094424240.1|1085054_1085426_-|GntR-family-transcriptional-regulator
MQIIISNSSKEPIYEQITNQIKSAILSGELPEGTAIPSMRKLAKDLQISVITTKRAYEELEKAGFIYSIVGKGSFVAEQNLEVMREKKLRVIEEQLSTVIANSKEIGLSVEELQELLKILYEE
>NZ_CP019985.1|WP_157730357.1|1085850_1086066_-|CPBP-family-intramembrane-metalloprotease
MADWAVILISTFLFWVIHVPQYKGVSLALVGVFINGLLFALLFYVTGSIIPSLLAHAVYNVGIGIYFMKAK

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Crispr_ID: NZ_CP019985_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_2

1862787-1863346

Orphan

I-C

Consensus_repeat	Method
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CRT

8 spacers

The CRISPR arrays of NZ_CP019985_2

>merge|NZ_CP019985|2|1862787-1863346|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAATCCATTCGCGGAATGCTGACAAAGCTGGTTGCACCGTCGCACTCTTTGTGAGTGCGTGGATTGAAATGATTTGACTTTGATTACGGTTGATGGAACAAATGTCGCACTCTTTGTGAGTGCGTGGATTGAAATTTTCTACACAAGCGAAATCTTTGATTACGAGGTTTGTCGCACTCTTTGTGAGTGCGTGGATTGAAATTTGCGACTCGACTAGGCCAGCGAGAAATTGAACGTCGCACTCTTTGTGAGTGCGTGGATTGAAATTCCTATGCTTTTGCAGCGCATTGACGAACCGATAGGTCGCACTCTTTGTGAGTGCGTGGATTGAAATCCAGCCTTGTTCGACCTCTACCTTTCCCTTTGTGTCGCACTCTTAGTGAGTGCGTGGATTGAAATTACCACTGCTTTTACGAAGTACTCGTTTAGCTCCTGTCGCACTCTATGTGAGTGCGTGGATTGAAATCAGATGTCCATGTTGATTTGACCTGTCTGTAAAGGTCGCACTCTATGCGAGTGCTTCATTGAATCT

>NZ_CP019985|2|1|1862787-1863280|PILER-CR
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CCATTCGCGGAATGCTGACAAAGCTGGTTGCACC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	GATTTGACTTTGATTACGGTTGATGGAACAAAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTTCTACACAAGCGAAATCTTTGATTACGAGGTTT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTGCGACTCGACTAGGCCAGCGAGAAATTGAAC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TCCTATGCTTTTGCAGCGCATTGACGAACCGATAG
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CCAGCCTTGTTCGACCTCTACCTTTCCCTTTGT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TACCACTGCTTTTACGAAGTACTCGTTTAGCTCCT
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|2|2|1862787-1863346|CRISPRCasFinder
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CCATTCGCGGAATGCTGACAAAGCTGGTTGCACC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	GATTTGACTTTGATTACGGTTGATGGAACAAAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTTCTACACAAGCGAAATCTTTGATTACGAGGTTT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTGCGACTCGACTAGGCCAGCGAGAAATTGAAC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TCCTATGCTTTTGCAGCGCATTGACGAACCGATAG
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CCAGCCTTGTTCGACCTCTACCTTTCCCTTTGT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TACCACTGCTTTTACGAAGTACTCGTTTAGCTCCT
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	CAGATGTCCATGTTGATTTGACCTGTCTGTAAAG
GTCGCACTCTATGCGAGTGCTTCATTGAATCT

>NZ_CP019985|2|1|1862787-1863346|CRT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CCATTCGCGGAATGCTGACAAAGCTGGTTGCACC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	GATTTGACTTTGATTACGGTTGATGGAACAAAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTTCTACACAAGCGAAATCTTTGATTACGAGGTTT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTGCGACTCGACTAGGCCAGCGAGAAATTGAAC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TCCTATGCTTTTGCAGCGCATTGACGAACCGATAG
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CCAGCCTTGTTCGACCTCTACCTTTCCCTTTGT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TACCACTGCTTTTACGAAGTACTCGTTTAGCTCCT
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	CAGATGTCCATGTTGATTTGACCTGTCTGTAAAG
GTCGCACTCTATGCGAGTGCTTCATTGAATCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425011.1\|1872121_1873564_+\|anion-permease	unknown	unknown	gnl\|CDD\|273267
NZ_CP019985.1\|WP_094424988.1\|1856558_1857827_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP019985.1\|WP_011248497.1\|1867805_1868729_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP019985.1\|WP_094425000.1\|1864929_1865160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094424990.1\|1857851_1858160_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906
NZ_CP019985.1\|WP_094424998.1\|1863622_1864498_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP019985.1\|WP_094424994.1\|1858687_1859773_+\|DUF871-domain-containing-protein	unknown	unknown	gnl\|CDD\|377567
NZ_CP019985.1\|WP_094425013.1\|1874876_1876067_+\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349921
NZ_CP019985.1\|WP_094425009.1\|1870852_1872064_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349891
NZ_CP019985.1\|WP_157730385.1\|1859777_1860674_+\|ATPase	unknown	unknown	gnl\|CDD\|225518
NZ_CP019985.1\|WP_094425004.1\|1866876_1867794_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP019985.1\|WP_094424992.1\|1858346_1858685_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376749
NZ_CP019985.1\|WP_094424982.1\|1854394_1854610_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094424984.1\|1854885_1856202_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP019985.1\|WP_094425007.1\|1869767_1870802_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|185037
NZ_CP019985.1\|WP_094425005.1\|1868772_1869771_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP019985.1\|WP_011248511.1\|1852507_1852999_-\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|225937
NZ_CP019985.1\|WP_094424986.1\|1856194_1856500_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_063609918.1\|1861177_1862449_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP019985.1\|WP_094425002.1\|1865225_1866806_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173863

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425011.1\|1872121_1873564_+\|anion-permease	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	1.45529e-44
NZ_CP019985.1\|WP_094424988.1\|1856558_1857827_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	7.06379e-147
NZ_CP019985.1\|WP_094425007.1\|1869767_1870802_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|185037	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional.	1.1292e-150
NZ_CP019985.1\|WP_011248497.1\|1867805_1868729_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.00257e-105
NZ_CP019985.1\|WP_094424990.1\|1857851_1858160_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.74184e-36
NZ_CP019985.1\|WP_094424998.1\|1863622_1864498_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.388e-52
NZ_CP019985.1\|WP_094424994.1\|1858687_1859773_+\|DUF871-domain-containing-protein	gnl\|CDD\|377567	pfam05913, DUF871, Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.	0
NZ_CP019985.1\|WP_094425009.1\|1870852_1872064_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349891	cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins. Peptidase M20 family, Poly(aspartic acid) hydrolase (PAA hydrolase)-like subfamily. PAA hydrolase enzymes are involved in alpha,beta-poly(D,L-aspartic acid) (tPAA) biodegradation. PAA is being extensively studied as a replacement for commercial polycarboxylate components since it can be degraded by enzymes from isolated tPAA degrading bacteria. Thus far, two types of PAA degrading bacteria (Sphingomonas sp. KT-1 and Pedobacter sp. KP-2) have been investigated in detail; the former can completely degrade tPAA of low-molecular weights below 5000, while the latter can degrade high molecular weight tPAA to release oligo(aspartic acid) (OAA) as a product, suggesting two kinds of PAA degrading enzymes. It has been shown that PAA hydrolase-1 from Sphingomonas sp. KT-1 hydrolyzes beta,beta-aspartic acid units in tPAA to produce OAA, and it is suggested that PAA hydrolase-2 hydrolyzes OAA to aspartic acid. Also included in this family is Bradyrhizobium 5-nitroanthranilic acid (5NAA)-aminohydrolase (5NAA-A), a biodegradation enzyme that converts 5NAA to 5-nitrosalicylic acid; 5NAA is a metabolite secreted by Streptomyces scabies, the bacterium responsible for potato scab, and metabolized by Bradyrhizobium species strain JS329.	1.89434e-94
NZ_CP019985.1\|WP_157730385.1\|1859777_1860674_+\|ATPase	gnl\|CDD\|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	1.81242e-36
NZ_CP019985.1\|WP_094425004.1\|1866876_1867794_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.5848e-122
NZ_CP019985.1\|WP_094424992.1\|1858346_1858685_+\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|376749	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.	1.77069e-35
NZ_CP019985.1\|WP_094425013.1\|1874876_1876067_+\|M20-family-metallopeptidase	gnl\|CDD\|349921	cd05672, M20_ACY1L2-like, M20 Peptidase aminoacylase 1-like protein 2-like, amidohydrolase subfamily. Peptidase M20 family, aminoacylase 1-like protein 2 (ACY1L2; amidohydrolase)-like subfamily. This group contains many uncharacterized proteins predicted as amidohydrolases, including gene products of abgA and abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate utilization is catalyzed by the abg region gene product, AbgT. This subfamily includes Staphylococcus aureus antibiotic resistance factor HmrA that has been shown to participate in methicillin resistance mechanisms in vivo in the presence of beta-lactams. Aminoacylase 1 (ACY1) proteins are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	2.91528e-149
NZ_CP019985.1\|WP_094424984.1\|1854885_1856202_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP019985.1\|WP_094425005.1\|1868772_1869771_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NZ_CP019985.1\|WP_011248511.1\|1852507_1852999_-\|PH-domain-containing-protein	gnl\|CDD\|225937	COG3402, COG3402, Uncharacterized conserved protein [Function unknown].	6.46504e-28
NZ_CP019985.1\|WP_063609918.1\|1861177_1862449_-\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.4687e-33
NZ_CP019985.1\|WP_094425002.1\|1865225_1866806_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173863	cd08498, PBP2_NikA_DppA_OppA_like_2, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

>NZ_CP019985.1|WP_063609918.1|1861177_1862449_-|IS110-family-transposase
MNYTQNQKIKQITPSTLIIGIDIAKDKHVARAQDDRGIEFGKRLIFENHIHGFEQLIVWAERYAQENGKKTILFGAEPTGHYWKNLAYYLVAKHYQFVVVNPMHVKKSKELDDNSPTKNDTKDAKVIAQLIKDGRYSVPNLVEGIYAELREGAKIRDQLVEQLMTTEGRIQNLIQRYFPEFFGVFGDWEGKAALCTLKFFPFPSDISQMTPEEVLQKWKPYVQRGVGIQRATKLVEAAKKSIGLSVGIRFARQEMGCLLDQYELFKTQLEELDQDLEEVGKTIPGAKKMMAIKGLGVATVTTILAETGDLTKYSHPQQLINLAGLSLRENRSGKWKGQTKITKRGRSKLRRALYLAIRPLVAHNSTFKALHSYYTKRPDKPLKKQQSLIALCGKLLKVIFVIGQRQCPFDGSKLLCGIPQNQA
>NZ_CP019985.1|WP_157730385.1|1859777_1860674_+|ATPase
MYVIGLDAGGTKTHGAVMDQEQNIHFSVETGPGNVAVDSEKAKEQIMAAIQACIKSKYGSLCKAIVLGIAGIEKGHLKSEFKTLVEQQFQLPALILNDAELALYAVLEGENGILAIAGTGSVLIGKKDSTIKMVGGWGHLLGDEGSAYHIGIQALKQLASEIEQGNIQTKLAKALATQYQLPDASAIKEFVYSSTKKEIADIALFVYRRAQDDTDAKKLLEQAGEELAQQAIRLVKQLELETSAIPIIVKGSLLEKNEFVRHHFAEKLKQCSTGISIVCKNRPTVTGALHAWKNSNHD
>NZ_CP019985.1|WP_094424994.1|1858687_1859773_+|DUF871-domain-containing-protein
MQQLGISIYPNHSTTEKDKQYIHVANQYGFTRVFTCLLSVEQDNILASFKETIHYAKQLGMEVICDINPRVFKDLGISYDDLTFFKNLGADGIRLDLGFTGNEESMMTFNPHGLFIEVNMSNSTKYIDNILSFQPNRNKLIGCHNFYPHRYSGLSYDFFIECSEKFKKYGLRTAAFVSSQAATFGPWPIVEGLPTLEMHRGLPIDVQAKHLFATRLIDDVIIGNAYASEEELKRLSQINKEKLTFNLELVDSVSALEKKILFDEPHFYRGDVSDYMIRSTQSRVKYRGEAFPPHNTTDIKRGDVVIESELYEQYAGELQIALKDMNNSGRTNVVARIREEEIFLIDSLKPWDKFAFSEWDG
>NZ_CP019985.1|WP_094424992.1|1858346_1858685_+|PTS-lactose/cellobiose-transporter-subunit-IIA
MNVEVEIFNIISNAGDAKSIAYEALKLAQNNDFHLANEKLETANKTLAKAHNTQTKLIQAEINGEHVEQSLLMVHAQDHLMAAISEMSLIEQMIAILRRVAQLEERAESESV
>NZ_CP019985.1|WP_094424990.1|1857851_1858160_-|PTS-sugar-transporter-subunit-IIB
MTKVLFVCSGGMSSAIVVNTLKKEAEKHGQALEVKAIGSSEVAAELENNWDVVMVAPQIKHRFDNIKKEADAHGVPCGPIPPQAYTPLGGPTLLKTLQELVK
>NZ_CP019985.1|WP_094424988.1|1856558_1857827_-|PTS-sugar-transporter-subunit-IIC
MGKFIDFLEKRVSNPMARLAEQRHLLAVRDGVVSSLPFIIVGSFFLIIAFPPLPESWGITQWATENADQILIPYRMTMFIMSLYVAFGIGYNLAQSYKVDPLSGGQIAVASLLLTITPSVVEELGFVLPMQYLGGSGLFVTIIVSILSVEIFRICKQRNITIRLPEAVPASVSRSFEALIPVAIVIMLMTLITIIMGVNLHALVEKLTVPLVTAGDSLFGVLVPVFLITFFWSFGIHGVSVVGSVARPLWETYLLKNGEAVASGASELPHIAPEPLYQWFIWIGGSGATLGLVIVMLIFARSKYLKSLGRTVAVPSIFNINEPVIFGLPIVLNPILVIPFIITPIITAVIAYLATSVGLVSPTFIKAPWTLPAPIGAYLATGGDWRSIILVLVNLAISVVIYLPFLRIYDKKMLAMEQNEEQ
>NZ_CP019985.1|WP_094424986.1|1856194_1856500_-|hypothetical-protein
MEQSRLIPRISPKGVFVFMLILFFGMLLLSIPLKYIHLSETMSAFLSAGISAAIGIGIVLTKIDGKTTDKRLNRQRIRIAIIVGFATSALMTFVFGGDLLG
>NZ_CP019985.1|WP_094424984.1|1854885_1856202_-|6-phospho-beta-glucosidase
MGKKGIKIVTIGGGSSYTPEFVEGLIKRHKELPVRELWLVDIEKGKEKLEIVGNLAKRMVKKAGLPITIYTTFDRKEALKDADFVTTQMRVGLLEARIKDERIPLKHGMIGQETNGAGGLFKALRTIPVLLEIAEQMHELCPNAWLINFTNPAGIVTEAVMKYSQHKKIIGVCNVPINTKMTIATLLDVPPDQLAITFAGLNHMSYGLDVHVNGESRLNDVIDLVTDPAHEVTMKNIIPLPWEKAFMKALGCIPSPYHRYYYKTNEILQKELEEFKQGKTRAEVVKQLEDELFELYKDPALDIKPPQLEKRGGAYYSDAACNLISSIYNDKGDVQTLNTRNEGAITNLPNDTIVEVNCIVTKQGPIPLAVGELPYSINGLIQQIKSFELVAIEAAVTGSYEQALLALCINPLITSDVKAKEILDEMLEAHKTDLPQFH
>NZ_CP019985.1|WP_094424982.1|1854394_1854610_+|hypothetical-protein
MDEPIKISQLLEAAIAYVLALFAIIGLEALFVGVFPRATIGLKIYIEANEENKPLKARVLYMCRTLCGCID
>NZ_CP019985.1|WP_011248511.1|1852507_1852999_-|PH-domain-containing-protein
MSIPINAPQKRLSKDAIKVWLISDAIGNMIVLIILGILFYLDDRFLWKEWVGWLLIGATVLTIIGWIWSVIRPFLLYKHWRYDVDEAYLQLKSGALKETHELVPMTKIQSVATEQGPLLRKYGLCSVSVETMGSSHTIPALPKEAAVELRNQIAQYARIKEVE
>NZ_CP019985.1|WP_094424998.1|1863622_1864498_-|LysR-family-transcriptional-regulator
MNEKDWELLQTLYEMKNITKAAEKLFISQPALTYRLRSLENEFGVEIAKRGTKRLQFTSEGEYLVEYSRKMLNELAKTKDQLLNMAGNIQGHLRIGVSSHFAHYRLPTILKDFLAVYPNVQVNVTTGWSTKISQKLEKKEVHIGIIRGSYEWKEQSILLSEENVCLISENKIHMGDLPSIGRISYKTDPIFDNMIKDWWNHHFSQPPMVTMEVDRIETCKEMVRNGLGYAIIPQISLRPHDQLYNRILAIDNHPLLRKTWLIYSNSALDLSVVKAFVQFVTTQLRQKAHSF
>NZ_CP019985.1|WP_094425000.1|1864929_1865160_+|hypothetical-protein
MNAKTHASEVRMGKNIAYFWKIYSSFLIGGVLLELKGEETLKKKDRCIPNNVDKQVKDNNGWNVLFFKIRNTGRES
>NZ_CP019985.1|WP_094425002.1|1865225_1866806_+|ABC-transporter-substrate-binding-protein
MKRPFLMQMMPIVVGGLLLSGCMTNEENMTTAPDAGGEGGASSSNDTTLTIAQGSDMVSFDVHDHSNTSTEAIHVNMFSYLVKNDVEGEGIVPDLATDWELVDDETWQFTLRDDAVFHNGDPVTAEDVKFTLERVAKDNTLQEHENYRQINEVEVIDDHTFLIHTNGPQPVLLNRLSRLGSGILPKDYIEENGWDHFLQEPVGSGPYQFVEWIRDDRVVLERFDDYFGGDVAVWDQLVFRSIPESSTRVGEVIAGGVDIAMNIAPIDWDRVNENEGTSIVEGQTNRTMMLVPNHREEYPTSDPLVREAIDLAIDNQALLDNLMGGSGTPTLTRVNPGNFGANEALHGEYRYDPDRAKELLEEAGYGDGLELTLHSPDGRYLQDRETTEVIAGMLSEVGIDVKIDFMEWSAYVDLRDAHEQKDLYLIGLTGSLWDAAHQLRHHTSMVAEDHIGYSSEEFDRIYLEAEVNMDEAEREQQYIDLQTMADEELINIMLFQLDSFYAVNDRIQFEPRLDEMWRVEEITLSE
>NZ_CP019985.1|WP_094425004.1|1866876_1867794_+|ABC-transporter-permease
MRKYLLWRVLQIIPVLFLISIFVFALLYLAGDPVALMLPEDATQEQVDALRESLGLDQPFYIQYLSFVGDMIQGNFGYSYRYSQPALPIVLERLPATFELAFASMIVAVLIAVPLGILSATKRNTALDVFISGASVLGKAMPNFWLGIMLILMLAITYPFFPVSGSGSVAHLILPAITLGTGCAAEMTRVLRSSMLETLNQDYVRTAVSKGVKNFFVVYKHAFRNALIPFITITFLQVSTLVSGALITEVVFSWPGLGQLLIQAINGRDMAVVQATVFIVAFIVIVVNLMADVLYRVLDPRIQFD
>NZ_CP019985.1|WP_011248497.1|1867805_1868729_+|ABC-transporter-permease
MQTEQPVKHLRNHTTENRLANWTRRWARLLFKSKTGTIGLIITGLIFLLAIFAPVLSPYHPNVQNYAAMNVPPVWLEGGMKEHLLGTDNLGRDMLSRIIYGTQVSLLVGVCSVVVAGAIGMFFGLIAGYYGGFIDNVLMRIVDAFLAIPNVLFILVILGVLSPGLLTLIFVIGLTNWVIYARLVRGDVLSIKEREFIKAARTIGTKNPVIICKHVLPNVMPSFIVISTLSVATTIVLEASLSYLGLGVQPPTVSWGGMLSAGRDYLATSWWIATFPGLAIMITVLGIIFLGDWLRDVLDPRSQTLRS
>NZ_CP019985.1|WP_094425005.1|1868772_1869771_+|ABC-transporter-ATP-binding-protein
MARQNRLLEVENLKTYFHTENGTVPSVDGVSFHVDRGETVAIVGESGSGKSVTSFSIMGLVSPPGKIEAGHIRFDGTELTSLSERKMRKVRGNEIAMIFQEPLTSLNPVFTVGHQISEAILLHQDTKKAEARKQGIAMLKRVGISRAEQVYQSYPHALSGGMRQRVMIAMALSCNPKMLIADEPTTALDVTIQAQILRLLKKISKEVDTSIILITHDLGVVAELVDRVIVMYAGQIVEQADVYTIFKDPKHPYTQGLLESTPKIHELHDELKSIRGVVPVPTNMPTGCRFHPRCPHAMDICKEKEPMMVDRDGKAQVQVRCWLYASEKEDVG
>NZ_CP019985.1|WP_094425007.1|1869767_1870802_+|ATP-binding-cassette-domain-containing-protein
MIKEVANTKEDDTLLEIKGLKKHFDVTRKIFAKKKDILKAVDGVDFIVKKGETFGIVGESGCGKSTTGNMIMRLADPTAGSIHFEGKDLSKLAKNEQSKMKKDIQMIFQDPFSSLNPRMRVFEIIAEPLRTHKIATGKELKQQVYELLDVVGLDRSLAKRFPHEFSGGQRQRIGIARALALRPKLIVCDEPVSALDVSIQSQVLNLLSKLQKDFDLTYIFIAHGLPVVKHISDRVAVMYLGKIVETAATEELFKHPKHPYTEGLLRAIPVPDPTLRSLDSGELLEGDLPSPVNPPSGCHFRTRCPYADEKCKAEAPKLQEVAKAHYVACHYPLQAGRGVIMEHV
>NZ_CP019985.1|WP_094425009.1|1870852_1872064_+|M20/M25/M40-family-metallo-hydrolase
MQQTYEALKNDPAIQQGLAFIEEDDEQTLAEQVAMTEIPAPPFKEAERATYVQQKFSEYGLEAVRRDKEGNVIGSYKGVGDGPVIVLSAHLDTVFPEGTDTKVRRERDRLCAPGIFDDTRGLAEMLSIIRALHRTNVKTSGTIQFVASVGEEGIGDLRGVKAFFADSPHVDAFISIDGTGVGHIVYEGTGSCRYKITYSATGGHSYGDFGLPSAIHAAGRAVAAIADCRPPTEPKTTFTIGEIAGGTAVNAIASSASFHLDVRSTSPQALEQLESTFLKACEQAAEQENSHWQKHDVTVDIKRVGDRPAGRQDKEATIVQAVVQASKELGIAPTLKGAASTDSNIPIHLGIPAVTVGRGGNGGGTHTLGEWFEPVHAYLSPQRTFLAALALVGVDQVSRPLLA
>NZ_CP019985.1|WP_094425011.1|1872121_1873564_+|anion-permease
MSSQLDADNMKKPSKATYKYVVLGVLLLFLFASPFLPVPESMELRGWSALAVVTLGIGLWFTHLLPPAVTAMLLIVLFPLFGVLTFEQSAASLGKEVIWLIIAMLMMGAAVERTGLDKRIAFTILMLTKGNIRLVLLALIFVGFVLTFFLPNAIGRVVVLLPIALGVVQSLAGTGGPNVGKASMFAITYTPIICSVALITGATGSVYAASLFETMLGFEWRYLYWMAVMLPSTLAILLILWLALLWLFPIKAGKHAQGEAYFEQEKDKLGPMSFQEKTLLILYVLLITLWTTQSVHQLSISFSAVLIVIALYIPGIQLMEWKEAVAKVDWSIPLLFSAGFSMAEAFEAGGVVQWSSSLASAHLNGLPAFTLAVSLLLVVAAIRIGFTNLTAMIASLMPVALTFAAGSNVNPVWLGMICLAACSTGFLFPSQSVGTMMTYALGYYTSQELLKVGAILTLSVIVITLLAAFLYWPLIGLPVH
>NZ_CP019985.1|WP_094425013.1|1874876_1876067_+|M20-family-metallopeptidase
MAATILAEKQEILTALDQRDKELRELALMIHANPELSFKEYKAAEWLSAYLEKEGFQVERGIAGLETAFTAVWEGNPGGPVIGIIAEYDALPNLGHACGHNLIGTAAVGAAVALKDAYPELQGTIKVIGTPAEEGGGGKIYMCNHGTFNDLDAAMMVHPKNKTMVLRGGLACMTATFSFYGKESHAASAPEKGISALDALIQSYNAINSLRQFFTDDVRIHGIITKGGDAANIVPGHCEAQFIIRAAITNRLHEIKEKVYEAVRYSSQSVGAKYKIEEGLIYAERNNNHALAELFKENWEAMGIEVEDPPKQGGIGSSDIGNVGQVTATIHPYIKIGENTNHTFEFTEDTKSEGGMKGMNQAAAGLAMTAYDLCTNPDALKAIRDEFEAWKKTQGR

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Crispr_ID: NZ_CP019985_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_3

1877195-1878093

Orphan

I-C

Consensus_repeat	Method
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCTNTGTGAGTGCGTGGATTGAAAT	CRT

13 spacers

The CRISPR arrays of NZ_CP019985_3

>merge|NZ_CP019985|3|1877195-1878093|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAATCGTAATATAGTCCGCGCCGATAAAAGGGTTGTCTATGTCGCACTCTTTGTGAGTGCGTGGATTGAAATAAATCCATATGCTTTTAGTTTTTGAATTGCTGATGTCGCACTCTTTGTGAGTGCGTGGATTGAAATTTCGGGCGCCGCTCTTTGAACTTAGGCACAGCCCGTCGCACTCTTTGTGAGTGCGTGGATTGAAATAGCCCCTATATCGTCAAGGACCAATAAATCACAAGTCGCACTCTTTGTGAGTGCGTGGATTGAAATCTCAGACATATAATCCTCTCCACGACAGGTGGGGTCGCACTCTTTGTGAGTGCGTGGATTGAAATCTTTAGCTTATTAATTACGTTTTCCATTACTATCGCGTCGCACTCTTTGTGAGTGCGTGGATTGAAATAATATACAAATCAGTTATGCGTTCGATGAATTCTTTGTCGCACTCTTTGTGAGTGCGTGGATTGAAATAAAGATCACTGCACACCCACCAGTGCGTGACCACGTCGCACTCTATGTGAGTGCGTGGATTGAAATAACGATGTCCATTAGGTCGTTTAACGAGCAATTAAGTCGCACTCTATGTGAGTGCGTGGATTGAAATTCTTCGAGTTCAATGATTTTCACAGTTGCTTCTAGTCGCACTCTATGTGAGTGCGTGGATTGAAATTCGAAAATGGCGGCGACTTGCGCCACTTGCAGAAGGTCGCACTCTATGTGAGTGCGTGGATTGAAATGGTTATTTTGCATAGGTCGCCTCCACTGAGATTTTGTCGCACTCTTTGTGGGTGCGTGGATTGAAATAACGATATAGCGAACATGCTGCAAATCATCTATGTGTCGCACTCTATGTGAGTGCGTCGCATAAACT

>NZ_CP019985|3|2|1877195-1878026|PILER-CR
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CGTAATATAGTCCGCGCCGATAAAAGGGTTGTCTAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AAATCCATATGCTTTTAGTTTTTGAATTGCTGAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTCGGGCGCCGCTCTTTGAACTTAGGCACAGCCC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AGCCCCTATATCGTCAAGGACCAATAAATCACAA
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CTCAGACATATAATCCTCTCCACGACAGGTGGG
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CTTTAGCTTATTAATTACGTTTTCCATTACTATCGC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AATATACAAATCAGTTATGCGTTCGATGAATTCTTT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AAAGATCACTGCACACCCACCAGTGCGTGACCAC
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	AACGATGTCCATTAGGTCGTTTAACGAGCAATTAA
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	TCTTCGAGTTCAATGATTTTCACAGTTGCTTCTA
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	TCGAAAATGGCGGCGACTTGCGCCACTTGCAGAAG
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	GGTTATTTTGCATAGGTCGCCTCCACTGAGATTTT
GTCGCACTCTTTGTGGGTGCGTGGATTGAAAT

>NZ_CP019985|3|3|1877195-1878093|CRISPRCasFinder
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CGTAATATAGTCCGCGCCGATAAAAGGGTTGTCTAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AAATCCATATGCTTTTAGTTTTTGAATTGCTGAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTCGGGCGCCGCTCTTTGAACTTAGGCACAGCCC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AGCCCCTATATCGTCAAGGACCAATAAATCACAA
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CTCAGACATATAATCCTCTCCACGACAGGTGGG
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CTTTAGCTTATTAATTACGTTTTCCATTACTATCGC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AATATACAAATCAGTTATGCGTTCGATGAATTCTTT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AAAGATCACTGCACACCCACCAGTGCGTGACCAC
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	AACGATGTCCATTAGGTCGTTTAACGAGCAATTAA
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	TCTTCGAGTTCAATGATTTTCACAGTTGCTTCTA
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	TCGAAAATGGCGGCGACTTGCGCCACTTGCAGAAG
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	GGTTATTTTGCATAGGTCGCCTCCACTGAGATTTT
GTCGCACTCTTTGTGGGTGCGTGGATTGAAAT	AACGATATAGCGAACATGCTGCAAATCATCTATGT
GTCGCACTCTATGTGAGTGCGTCGCATAAACT

>NZ_CP019985|3|2|1877195-1878093|CRT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CGTAATATAGTCCGCGCCGATAAAAGGGTTGTCTAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AAATCCATATGCTTTTAGTTTTTGAATTGCTGAT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	TTCGGGCGCCGCTCTTTGAACTTAGGCACAGCCC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AGCCCCTATATCGTCAAGGACCAATAAATCACAA
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CTCAGACATATAATCCTCTCCACGACAGGTGGG
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	CTTTAGCTTATTAATTACGTTTTCCATTACTATCGC
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AATATACAAATCAGTTATGCGTTCGATGAATTCTTT
GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT	AAAGATCACTGCACACCCACCAGTGCGTGACCAC
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	AACGATGTCCATTAGGTCGTTTAACGAGCAATTAA
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	TCTTCGAGTTCAATGATTTTCACAGTTGCTTCTA
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	TCGAAAATGGCGGCGACTTGCGCCACTTGCAGAAG
GTCGCACTCTATGTGAGTGCGTGGATTGAAAT	GGTTATTTTGCATAGGTCGCCTCCACTGAGATTTT
GTCGCACTCTTTGTGGGTGCGTGGATTGAAAT	AACGATATAGCGAACATGCTGCAAATCATCTATGT
GTCGCACTCTATGTGAGTGCGTCGCATAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425011.1\|1872121_1873564_+\|anion-permease	unknown	unknown	gnl\|CDD\|273267
NZ_CP019985.1\|WP_094425029.1\|1887264_1887987_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|224982
NZ_CP019985.1\|WP_094425015.1\|1876272_1876782_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425019.1\|1879150_1880173_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270264
NZ_CP019985.1\|WP_094425007.1\|1869767_1870802_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|185037
NZ_CP019985.1\|WP_011248497.1\|1867805_1868729_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP019985.1\|WP_011248484.1\|1884916_1885675_+\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_CP019985.1\|WP_094425025.1\|1883241_1884912_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP019985.1\|WP_094425009.1\|1870852_1872064_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349891
NZ_CP019985.1\|WP_094425004.1\|1866876_1867794_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP019985.1\|WP_094425013.1\|1874876_1876067_+\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349921
NZ_CP019985.1\|WP_094425027.1\|1885792_1886890_-\|RapH-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|376220
NZ_CP019985.1\|WP_094425023.1\|1881332_1882988_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP019985.1\|WP_094425033.1\|1889192_1889417_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425005.1\|1868772_1869771_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP019985.1\|WP_094425000.1\|1864929_1865160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425017.1\|1878251_1878761_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425031.1\|1888093_1888972_-\|ribokinase	unknown	unknown	gnl\|CDD\|238579
NZ_CP019985.1\|WP_094425021.1\|1880236_1881331_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP019985.1\|WP_094425002.1\|1865225_1866806_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173863

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425011.1\|1872121_1873564_+\|anion-permease	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	1.45529e-44
NZ_CP019985.1\|WP_094425029.1\|1887264_1887987_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|224982	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only].	1.05272e-77
NZ_CP019985.1\|WP_094425019.1\|1879150_1880173_+\|extracellular-solute-binding-protein	gnl\|CDD\|270264	cd13546, PBP2_BitB, Substrate binding domain of a putative iron transporter BitB, a member of the type 2 periplasmic binding fold superfamily. The substrate domain of this group shows a high homology to the periplasmic component of ferric iron transporter (Fbp), but its biochemical characterization has not been performed. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.65674e-97
NZ_CP019985.1\|WP_094425007.1\|1869767_1870802_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|185037	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional.	1.1292e-150
NZ_CP019985.1\|WP_011248497.1\|1867805_1868729_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.00257e-105
NZ_CP019985.1\|WP_011248484.1\|1884916_1885675_+\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	3.80928e-56
NZ_CP019985.1\|WP_094425025.1\|1883241_1884912_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.75553e-47
NZ_CP019985.1\|WP_094425009.1\|1870852_1872064_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349891	cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins. Peptidase M20 family, Poly(aspartic acid) hydrolase (PAA hydrolase)-like subfamily. PAA hydrolase enzymes are involved in alpha,beta-poly(D,L-aspartic acid) (tPAA) biodegradation. PAA is being extensively studied as a replacement for commercial polycarboxylate components since it can be degraded by enzymes from isolated tPAA degrading bacteria. Thus far, two types of PAA degrading bacteria (Sphingomonas sp. KT-1 and Pedobacter sp. KP-2) have been investigated in detail; the former can completely degrade tPAA of low-molecular weights below 5000, while the latter can degrade high molecular weight tPAA to release oligo(aspartic acid) (OAA) as a product, suggesting two kinds of PAA degrading enzymes. It has been shown that PAA hydrolase-1 from Sphingomonas sp. KT-1 hydrolyzes beta,beta-aspartic acid units in tPAA to produce OAA, and it is suggested that PAA hydrolase-2 hydrolyzes OAA to aspartic acid. Also included in this family is Bradyrhizobium 5-nitroanthranilic acid (5NAA)-aminohydrolase (5NAA-A), a biodegradation enzyme that converts 5NAA to 5-nitrosalicylic acid; 5NAA is a metabolite secreted by Streptomyces scabies, the bacterium responsible for potato scab, and metabolized by Bradyrhizobium species strain JS329.	1.89434e-94
NZ_CP019985.1\|WP_094425004.1\|1866876_1867794_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.5848e-122
NZ_CP019985.1\|WP_094425013.1\|1874876_1876067_+\|M20-family-metallopeptidase	gnl\|CDD\|349921	cd05672, M20_ACY1L2-like, M20 Peptidase aminoacylase 1-like protein 2-like, amidohydrolase subfamily. Peptidase M20 family, aminoacylase 1-like protein 2 (ACY1L2; amidohydrolase)-like subfamily. This group contains many uncharacterized proteins predicted as amidohydrolases, including gene products of abgA and abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate utilization is catalyzed by the abg region gene product, AbgT. This subfamily includes Staphylococcus aureus antibiotic resistance factor HmrA that has been shown to participate in methicillin resistance mechanisms in vivo in the presence of beta-lactams. Aminoacylase 1 (ACY1) proteins are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	2.91528e-149
NZ_CP019985.1\|WP_094425027.1\|1885792_1886890_-\|RapH-N-terminal-domain-containing-protein	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	5.85289e-21
NZ_CP019985.1\|WP_094425005.1\|1868772_1869771_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NZ_CP019985.1\|WP_094425031.1\|1888093_1888972_-\|ribokinase	gnl\|CDD\|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	5.57233e-117
NZ_CP019985.1\|WP_094425002.1\|1865225_1866806_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173863	cd08498, PBP2_NikA_DppA_OppA_like_2, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP019985.1\|WP_094425023.1\|1881332_1882988_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.59501e-108
NZ_CP019985.1\|WP_094425021.1\|1880236_1881331_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	3.89009e-149

>NZ_CP019985.1|WP_094425015.1|1876272_1876782_-|hypothetical-protein
MTAYAQSPEEIRESFLLVLNLMLFLYICLFILWLIAHLIVAAALSRMAKNAHIRHPWLSWIPIAQFWIVGELISGKLRGNGGIKVLLIGCVTIVFRFLPFHQLYIHLLVKIPEPIYRFVSITLWVLLIYIVYRLYEAYAKKAWIHTVLSIIPFYAPIALFVLRNRERRY
>NZ_CP019985.1|WP_094425013.1|1874876_1876067_+|M20-family-metallopeptidase
MAATILAEKQEILTALDQRDKELRELALMIHANPELSFKEYKAAEWLSAYLEKEGFQVERGIAGLETAFTAVWEGNPGGPVIGIIAEYDALPNLGHACGHNLIGTAAVGAAVALKDAYPELQGTIKVIGTPAEEGGGGKIYMCNHGTFNDLDAAMMVHPKNKTMVLRGGLACMTATFSFYGKESHAASAPEKGISALDALIQSYNAINSLRQFFTDDVRIHGIITKGGDAANIVPGHCEAQFIIRAAITNRLHEIKEKVYEAVRYSSQSVGAKYKIEEGLIYAERNNNHALAELFKENWEAMGIEVEDPPKQGGIGSSDIGNVGQVTATIHPYIKIGENTNHTFEFTEDTKSEGGMKGMNQAAAGLAMTAYDLCTNPDALKAIRDEFEAWKKTQGR
>NZ_CP019985.1|WP_094425011.1|1872121_1873564_+|anion-permease
MSSQLDADNMKKPSKATYKYVVLGVLLLFLFASPFLPVPESMELRGWSALAVVTLGIGLWFTHLLPPAVTAMLLIVLFPLFGVLTFEQSAASLGKEVIWLIIAMLMMGAAVERTGLDKRIAFTILMLTKGNIRLVLLALIFVGFVLTFFLPNAIGRVVVLLPIALGVVQSLAGTGGPNVGKASMFAITYTPIICSVALITGATGSVYAASLFETMLGFEWRYLYWMAVMLPSTLAILLILWLALLWLFPIKAGKHAQGEAYFEQEKDKLGPMSFQEKTLLILYVLLITLWTTQSVHQLSISFSAVLIVIALYIPGIQLMEWKEAVAKVDWSIPLLFSAGFSMAEAFEAGGVVQWSSSLASAHLNGLPAFTLAVSLLLVVAAIRIGFTNLTAMIASLMPVALTFAAGSNVNPVWLGMICLAACSTGFLFPSQSVGTMMTYALGYYTSQELLKVGAILTLSVIVITLLAAFLYWPLIGLPVH
>NZ_CP019985.1|WP_094425009.1|1870852_1872064_+|M20/M25/M40-family-metallo-hydrolase
MQQTYEALKNDPAIQQGLAFIEEDDEQTLAEQVAMTEIPAPPFKEAERATYVQQKFSEYGLEAVRRDKEGNVIGSYKGVGDGPVIVLSAHLDTVFPEGTDTKVRRERDRLCAPGIFDDTRGLAEMLSIIRALHRTNVKTSGTIQFVASVGEEGIGDLRGVKAFFADSPHVDAFISIDGTGVGHIVYEGTGSCRYKITYSATGGHSYGDFGLPSAIHAAGRAVAAIADCRPPTEPKTTFTIGEIAGGTAVNAIASSASFHLDVRSTSPQALEQLESTFLKACEQAAEQENSHWQKHDVTVDIKRVGDRPAGRQDKEATIVQAVVQASKELGIAPTLKGAASTDSNIPIHLGIPAVTVGRGGNGGGTHTLGEWFEPVHAYLSPQRTFLAALALVGVDQVSRPLLA
>NZ_CP019985.1|WP_094425007.1|1869767_1870802_+|ATP-binding-cassette-domain-containing-protein
MIKEVANTKEDDTLLEIKGLKKHFDVTRKIFAKKKDILKAVDGVDFIVKKGETFGIVGESGCGKSTTGNMIMRLADPTAGSIHFEGKDLSKLAKNEQSKMKKDIQMIFQDPFSSLNPRMRVFEIIAEPLRTHKIATGKELKQQVYELLDVVGLDRSLAKRFPHEFSGGQRQRIGIARALALRPKLIVCDEPVSALDVSIQSQVLNLLSKLQKDFDLTYIFIAHGLPVVKHISDRVAVMYLGKIVETAATEELFKHPKHPYTEGLLRAIPVPDPTLRSLDSGELLEGDLPSPVNPPSGCHFRTRCPYADEKCKAEAPKLQEVAKAHYVACHYPLQAGRGVIMEHV
>NZ_CP019985.1|WP_094425005.1|1868772_1869771_+|ABC-transporter-ATP-binding-protein
MARQNRLLEVENLKTYFHTENGTVPSVDGVSFHVDRGETVAIVGESGSGKSVTSFSIMGLVSPPGKIEAGHIRFDGTELTSLSERKMRKVRGNEIAMIFQEPLTSLNPVFTVGHQISEAILLHQDTKKAEARKQGIAMLKRVGISRAEQVYQSYPHALSGGMRQRVMIAMALSCNPKMLIADEPTTALDVTIQAQILRLLKKISKEVDTSIILITHDLGVVAELVDRVIVMYAGQIVEQADVYTIFKDPKHPYTQGLLESTPKIHELHDELKSIRGVVPVPTNMPTGCRFHPRCPHAMDICKEKEPMMVDRDGKAQVQVRCWLYASEKEDVG
>NZ_CP019985.1|WP_011248497.1|1867805_1868729_+|ABC-transporter-permease
MQTEQPVKHLRNHTTENRLANWTRRWARLLFKSKTGTIGLIITGLIFLLAIFAPVLSPYHPNVQNYAAMNVPPVWLEGGMKEHLLGTDNLGRDMLSRIIYGTQVSLLVGVCSVVVAGAIGMFFGLIAGYYGGFIDNVLMRIVDAFLAIPNVLFILVILGVLSPGLLTLIFVIGLTNWVIYARLVRGDVLSIKEREFIKAARTIGTKNPVIICKHVLPNVMPSFIVISTLSVATTIVLEASLSYLGLGVQPPTVSWGGMLSAGRDYLATSWWIATFPGLAIMITVLGIIFLGDWLRDVLDPRSQTLRS
>NZ_CP019985.1|WP_094425004.1|1866876_1867794_+|ABC-transporter-permease
MRKYLLWRVLQIIPVLFLISIFVFALLYLAGDPVALMLPEDATQEQVDALRESLGLDQPFYIQYLSFVGDMIQGNFGYSYRYSQPALPIVLERLPATFELAFASMIVAVLIAVPLGILSATKRNTALDVFISGASVLGKAMPNFWLGIMLILMLAITYPFFPVSGSGSVAHLILPAITLGTGCAAEMTRVLRSSMLETLNQDYVRTAVSKGVKNFFVVYKHAFRNALIPFITITFLQVSTLVSGALITEVVFSWPGLGQLLIQAINGRDMAVVQATVFIVAFIVIVVNLMADVLYRVLDPRIQFD
>NZ_CP019985.1|WP_094425002.1|1865225_1866806_+|ABC-transporter-substrate-binding-protein
MKRPFLMQMMPIVVGGLLLSGCMTNEENMTTAPDAGGEGGASSSNDTTLTIAQGSDMVSFDVHDHSNTSTEAIHVNMFSYLVKNDVEGEGIVPDLATDWELVDDETWQFTLRDDAVFHNGDPVTAEDVKFTLERVAKDNTLQEHENYRQINEVEVIDDHTFLIHTNGPQPVLLNRLSRLGSGILPKDYIEENGWDHFLQEPVGSGPYQFVEWIRDDRVVLERFDDYFGGDVAVWDQLVFRSIPESSTRVGEVIAGGVDIAMNIAPIDWDRVNENEGTSIVEGQTNRTMMLVPNHREEYPTSDPLVREAIDLAIDNQALLDNLMGGSGTPTLTRVNPGNFGANEALHGEYRYDPDRAKELLEEAGYGDGLELTLHSPDGRYLQDRETTEVIAGMLSEVGIDVKIDFMEWSAYVDLRDAHEQKDLYLIGLTGSLWDAAHQLRHHTSMVAEDHIGYSSEEFDRIYLEAEVNMDEAEREQQYIDLQTMADEELINIMLFQLDSFYAVNDRIQFEPRLDEMWRVEEITLSE
>NZ_CP019985.1|WP_094425000.1|1864929_1865160_+|hypothetical-protein
MNAKTHASEVRMGKNIAYFWKIYSSFLIGGVLLELKGEETLKKKDRCIPNNVDKQVKDNNGWNVLFFKIRNTGRES
>NZ_CP019985.1|WP_094425017.1|1878251_1878761_+|hypothetical-protein
MEEKEMLELLLQKVTDLELGLKEQKAHNAVVAKDLKEQKAHNAVVAKDLKEQKAYNAAVAKDLKEQKAHNAAFAKDLKEQKNYTAGITEELKDQKEHYLAMVQDIKELKEDQLIIKQAVLETNRSVKNIKTNIENLSDQVSQLSEDQKSVREILGDHEVAIRTLRRKPV
>NZ_CP019985.1|WP_094425019.1|1879150_1880173_+|extracellular-solute-binding-protein
MKALKKFGVVVGLAVAATGCGGNGSSGDNTLVVYTTRSESLNEAVIPQFEKETGIRVQMISAGTGEAITRVESERNNPQGDVLWAADITMLYDKTDLFEEYVSPEDEYMMEGFKNTTGYFSPAFSDPTVFIVNTDLAGDMKIESFQDLLNPELKGRIAFGDPVNSSSAFQSLIAMLYAAGDGDPMSDQAWEFVKAFVANLDGKVQGSSGQVHKGVADGEYVVGLTWEDPVVHYKQSGAAVEVVFPTEGVVYPGQSIQIIKGTKNLENAKKFVDYVLSEEVQSRTGQELTVRPLREGVEVADYMTPQEEIKLFDEYDEMFIIENMDDITARYVEVLEGSMD
>NZ_CP019985.1|WP_094425021.1|1880236_1881331_+|ABC-transporter-ATP-binding-protein
MGVAIDIDNVVKMYDEHTVIDGLSLKIEPGELFTLLGPSGCGKTTLLRMIIGFNSVDGGAIKVDGQRINDVPVSKRKMGMVFQNYAIFPHMTVAENIAFGLKTLKESKAQMQSKIDHIMKVVHIQDHHSKKPDKLSGGQQQRVALARALVINPNVLLMDEPLSNLDAKLRIEMRNAIKEIQQEVEITTVYVTHDQEEALAISDRIAVMNKGVIQQIGKPEQIYLRPSNLFVAQFIGTSNVIKAKVEKQGTDTFIVFNGEYKEKLENVVETVENGQEVLVSVRPQEFTITQEASAIAGVVESTMFLGINTHYLVTLTTGERVEVVQHIEDKAIIPEGTNIYVKVKPHLINLFDVANEQTLMKAGE
>NZ_CP019985.1|WP_094425023.1|1881332_1882988_+|iron-ABC-transporter-permease
MRPKAFNGWNWITLSIVLFFALFILFPVVLVLNKSIYNGEVGRFTLEHFSLFFERKFYWVTLWNSIKVTVVATLLAVLIGLPLAYMLRRVKIFGSGIVQILIIVSYISPPFIGAYAWIQLLGRSGVITKWINDTFQLQFDGIYGFAGIVLVLTLQSFPLIFIYISGALKNLDNSLIEAAESLGYSGVQRVVKIVVPLIAPTILASSLLVFMRVIADFGTPMLIGEGYRTIPVLIYTQFMSEVGGDAGFAAALASIFIIVTIALFLVQRVIARQYSYSMSALRPMETKKSTGMKNLLSHVAVYGVTLLAILPQLVVVYTSFLETIGGQVYTGKFSLQNYENILFNRDLSMILNTYQLGLIAIVVIVILGILIAYLTVRKRNKVTSLLDTVSMLPFVIPGSVLAMALIFAFGEAPLYLTGTSLIMVLAFVIRRMPYTVRSSTAIVSQISPSMEEAAISLGASERRTFFRVVVPMMMPGVLAGAIMSWMTILGELSASIILYSTNTQTLAVSIYTEVIRGNFGNASAYSAILTVTSILSLFLFFKLTGKKEMNV
>NZ_CP019985.1|WP_094425025.1|1883241_1884912_+|sensor-histidine-kinase
MERRRMKDDIQRSFLTNAIVIISAILCVYLLSLLFLFNVSIVRPSQATNERVAKEVEAEFAHYKEGMARLVADEQIRAFLRGEGKSGEVNQLLYDFRNAQTFQSDFVLLDSEAEIVATSLYEGQKEQLQQSPVLREQMQKAEEHPFTGEYVNKRAFNAGQGGAYVFAAAVEEGEGRTGYLLFLLEHTLQSASEQIVFVTDSFYNAVFYSHTIGIGALGKLTIPTDGFLVQYDGNPFYVTKTEVAGQPIQVITLTSVKTYQLLLLYGLLAMVVSSFVMLAVVWLVTPKILKKTLEPFDALVARISSKNNHLHFQQTDHVFAEVQTIYEEYTNKVHEIQALVDKNEEILEKKRLSEIKHLEAKFNPHFLYNVLEMIKYETLANPESAAEMIVKTAKLMRYNAHFGDTTVLLEEDIAYLQDYFALQKMRYGKRLDYTIAIEPELGRARVPKLLLQPLIENAIKHNIDGIRCLNVDVSAYWENGVLTFVVEDNGLGMTPGKVAKIKAIMAGEMKETAHTGLKNTHQMIQLLYGQRYGIDIASAPEKGEGTTVRMHIPYEG
>NZ_CP019985.1|WP_011248484.1|1884916_1885675_+|response-regulator
MLKVAIVEDEPILLKGLLYRVDWLSNDCTVVGAAEDGAEGLNLIKQTKPDIIITDIRMPFKDGLAMLKEAKADHSFEAIILSGFGEFDYAKQAITIGVHDYLLKPVDMHELEATLQKLVQKLQAQKSNDHLTKQTKVYSHLLDLGRGSHSTYVAEIMDFIKKHYHEKVTLKAASNEIGLSTVSLNDKLKEKTGYSFNELVTRYRLTKAISLLQDEKLLIYEVAEKTGFSDYKYFSQVFKKYTGMSPKQFCGK
>NZ_CP019985.1|WP_094425027.1|1885792_1886890_-|RapH-N-terminal-domain-containing-protein
MTVAVSPEKAGATIAEWYSCIIARSVEQASQLKAKVDAMFKQIEKNERLLAYYALVNFRYRLMCKQASQGGADDEMLKRAGMVAEESVDHLLKYLYYFSCGQNEFVNERYRSAIRLFRKAERLLEYVENREEEAEFHYYMGLSLYRISQYPFAGSYIEEALVEFNRLGNKERSIHCQTILGGIYSETKQYDKAVLILNEALAAAHPYPFSKMAVLRALGLNALRYHHYEQARQWFEKTLSYHEFQHTLIGVKNTYNLANTLYRLNLPQHAAPYLKKAAIGAEFYRNKEYKARCLATRGLYAEGNYALIDKAIEQLDTEGFDFEVDELAEEAATYFEQAGHTTLALKYLKIAYHAKQNLFKLGAGQ
>NZ_CP019985.1|WP_094425029.1|1887264_1887987_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MAKPVIGITSTIALHNQIPSVDLAEKVVEAVMNAGGVPIVLPVGNVELASDWIKACDGLILSSGEDVDPYLYKAEPSPKLQKTFKQRDEVEIALVKQALQQKKPIFAICRGIGVLNVALGGSLMQDIETALPNACKHYQEAGRTDVTHRIQIVKDSLLHQVIGSEEIRVNSLHHQAIGRLAPPLKQVASAADGVIEAVEGKAGMPYVLGVQWHPEELAANDAAMARLFTVLIERASEKSL
>NZ_CP019985.1|WP_094425031.1|1888093_1888972_-|ribokinase
MITVVGSINIDLVVHTGTMPVLGETVLGGEFQTNPGGKGANQAVAAARLGADVTMIGKVGSDPYGKLVTGNLQNEQINTDYIEVEKDGHTGVAMITVTNNDNAIVVAPGANFSWKPEDAAQYRDVFKQTNVLVLQLEVPLPFIEKIAKIGKEERCIVILNPAPAQPLPSSLLDLVDYITPNETECQTIFKQSVEQAVQRYPNKLLVTEGKKGAAYHDGQQLVQVNGFPANVVDTTGAGDTFNGALAAALASGQQLTEAVTFANAAASLSVEQAGAQAGMPSKQQVLVRLGLS
>NZ_CP019985.1|WP_094425033.1|1889192_1889417_-|hypothetical-protein
MDAVGYDMLNQQFISALESLAFATPSDEQEMAAAVLRLIKHKPEAIHVIDNDYKEAAIMEHWTNSMCKKECTSV

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Crispr_ID: NZ_CP019985_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_4

1992210-1992509

TypeIII

NA:I-C

Consensus_repeat	Method
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
CGTGAGTGCGTGGATTGAAAT	CRT

4 spacers

cas6

The CRISPR arrays of NZ_CP019985_4

>merge|NZ_CP019985|4|1992210-1992509|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCTTCGTGAGTGCGTGGATTGAAATGGGACATTTGCCGTATAACCCGCCGCCCGCAAATCGTCGCACTCTTCGTGAGTGCGTGGATTGAAATGAGGATTTATTCGGCAATGAATCGCCTATGATGTAGTCGCACTCTACGTGAGTGCGTGGATTGAAATTAAAAAGGTAGCTCACTTTTGTCCTTTATGTGGAGTCGCACTCTACGTGAGTGCGTGGATTGAAATATTGAATACAGCATTACATTCATTGAAGAACCTTTGTCGCACTCTACGTGAGTGCGTGGTGGAATGTC

>NZ_CP019985|4|3|1992210-1992441|PILER-CR
GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT	GGGACATTTGCCGTATAACCCGCCGCCCGCAAATC
GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT	GAGGATTTATTCGGCAATGAATCGCCTATGATGTA
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	TAAAAAGGTAGCTCACTTTTGTCCTTTATGTGGA
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|4|4|1992210-1992509|CRISPRCasFinder
GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT	GGGACATTTGCCGTATAACCCGCCGCCCGCAAATC
GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT	GAGGATTTATTCGGCAATGAATCGCCTATGATGTA
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	TAAAAAGGTAGCTCACTTTTGTCCTTTATGTGGA
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	ATTGAATACAGCATTACATTCATTGAAGAACCTTT
GTCGCACTCTACGTGAGTGCGTGGTGGAATGTC

>NZ_CP019985|4|3|1992221-1992508|CRT
CGTGAGTGCGTGGATTGAAAT	GGGACATTTGCCGTATAACCCGCCGCCCGCAAATCGTCGCACTCTT
CGTGAGTGCGTGGATTGAAAT	GAGGATTTATTCGGCAATGAATCGCCTATGATGTAGTCGCACTCTA
CGTGAGTGCGTGGATTGAAAT	TAAAAAGGTAGCTCACTTTTGTCCTTTATGTGGAGTCGCACTCTA
CGTGAGTGCGTGGATTGAAAT	ATTGAATACAGCATTACATTCATTGAAGAACCTTTGTCGCACTCTA
CGTGAGTGCGTGGTGGAATGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	unknown	unknown	gnl\|CDD\|375146
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP019985.1\|WP_094425156.1\|1979375_1980251_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0091_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_CP019985.1\|WP_094425154.1\|1978567_1979383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273925
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238570
NZ_CP019985.1\|WP_094425162.1\|1982944_1984741_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350092
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019985.1\|WP_094425168.1\|1987358_1988624_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP019985.1\|WP_094425166.1\|1985534_1987268_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP019985.1\|WP_094425164.1\|1984797_1985514_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP019985.1\|WP_094425160.1\|1982515_1982713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.34009e-91
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	gnl\|CDD\|375146	pfam17353, DUF5381, Family of unknown function (DUF5381). This is a family of unknown function found in Bacillales.	8.48841e-06
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.14602e-147
NZ_CP019985.1\|WP_094425156.1\|1979375_1980251_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	2.90267e-06
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	1.56363e-66
NZ_CP019985.1\|WP_094425162.1\|1982944_1984741_+\|hypothetical-protein	gnl\|CDD\|350092	cd08978, GH_F, Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. GH62 are also predicted to be inverting enzymes. A common structural feature of both, GH43 and GH62 enzymes, is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	4.33016e-08
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.7095e-49
NZ_CP019985.1\|WP_094425168.1\|1987358_1988624_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.19875e-65
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.86719e-94
NZ_CP019985.1\|WP_094425166.1\|1985534_1987268_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.38217e-54
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	8.48856e-16
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.000400655
NZ_CP019985.1\|WP_094425164.1\|1984797_1985514_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.50511e-53
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.29441e-89
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.80346e-18
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.07982e-36

>NZ_CP019985.1|WP_157730388.1|1990422_1991787_+|FAD-dependent-oxidoreductase
MRQVTEIEKQIRVRAEADVVVCGGGPAGIGAALSAARNGAKTILLEAHGFLGGMGTAGMVTSFAYGYHDKERFITGGIFQEIRQKLHDRGGLIMTDRKGWEPFNAEQYKILAFELLAEAGVELLCHTTVVDTITKAGTIEAIIIESKAGREALLATHVIDATGDGDVAERAGALCKIGRDKDGGTQPSSLMYVLGNVDTEALGEKLDQEGRRGYWKTEDGYRYVNATGFADEIEQAKRDGFLTKVNRDHIAAIFTVPWVDNVVGINFGRIQGKNALDPQDLTDAEVIGREQVLDGIAFLKEYVPGFKRAELLQTAPQVGIRETRRVIGDYVITQEDIVELKQFDDCIAQSCYMIDIHSPDSSTTEIYKLPKGTHYDIPYRALLPQGLNNLLVAGRCISATHEALGSFRVQAICLAIGEAAGAAAAIATKEKCLPREIDVTHLQDTLVNQGAILS
>NZ_CP019985.1|WP_094425172.1|1989562_1990396_+|carbohydrate-ABC-transporter-permease
MKINSVSTVVRYGLLTIISAIMLLPFIWMVTTSLKDPNQIFALPPTFIPNPIQWDSYLNVLSSTHFLRQMFNSIYIGAAVTIGTVLLASLAGYAFARIPFKGRNVVFLAFLSVMMIPGEVTIIPLFLFMRELGWIDTHLPLMIIPIFGAGGAFGIFVMRQFFKQVPAELEDAARIDGCSRFRIFVQIMLPLSKPALATVTIFTFLTNWNEFLEPLIFINSRELMTLPLALSLFTDEAGTDWSSLMSASVLATLPVLTVFFFAQKQFIESLAMSGSKE
>NZ_CP019985.1|WP_094425170.1|1988643_1989573_+|sugar-ABC-transporter-permease
MNADVQAEWRQKKKRPRKPMFKRDELAGWLFISPMLLGFTIFMFIPIGFAFYMSFTDWPLLGQSEFIGTANYQAIVQDPEFQKVMKNTVLFTAGLVPFNIILALGLALLLRHPLPGMGLFRTIVFVPVVTTLVVWAIVWRYMFATDFGFINSILAWFGIEPQAYLYNKNLAMPVVILTSVLKNVGLNMVLFLAALQMVPKNLYEAARIDGAGSWRQFKNITLPIISPTVFLATIITIIGAMKIFAQIFVMTKGGPESSTKVIVYYIWEKAFRLFDMGYASAAAFILFFVIFAFTLIQWWLRKRWVYNED
>NZ_CP019985.1|WP_094425168.1|1987358_1988624_+|sugar-ABC-transporter-substrate-binding-protein
MKRWSISAGLLLVVAGCSSSGGSTDANGDEQIELTFSTWGNENHIAVYEELLEAYYVDHPNIHVTIQTTPFPDYQQNMTVLAAGQELPDIGWAAERMVPQFIENNILADLSALREDESFHFEDILPGTITQYEVGDALYGVPFSSPPHIIFYNKTLFEKNGLETPQELESRGEWTWEAFEEAAAVIAEEEGVYGANFFRAWETWENLLAHTRAEGGDLFNEDTTEFTWNSEAGISTLEMLDRMMFEDRSHPRAGDQVAFEAGNVGMFFDVYSYVSTARGIEDFEWDIAPVPLGSQGRSPILGQAGYVMFEGTEHPEEALDLIRYFASETGMEATSTYFAPPRVSVLESDAFIEQPGNPPRESMESTILNLSEESRVLPIHPEWQNIDNHILQGFDHLFGQTAEPADILEQMEASINPLVQE
>NZ_CP019985.1|WP_094425166.1|1985534_1987268_+|sensor-histidine-kinase
MSLRPKIILLFLSIVLVPLNLLGMITYAYFSKTLEDQTYHYTVQVIGQVNQNVNAYIDEMHRLSLLPLYDRDILAILKNRSDVHHSYYPQTEEFERMSSFLSTLSYNRQELSGIHIITRDGSLFSDLGSPRTVHRLAEGASDWQEAIEAGNGASLLLPTHSPSYILGAEKSVFSVGRLLRDPDGFRPLGMIKVDIELSFIESLLEDVDLSEDASITMIDRNGEPIYETGKAIYPLLKAKGEDVWQLAERESITVDGVDYLPVIRNDSSGDVQTVVFLPEHHIVGASQSLRLFTIGLMLAVSAVVIMLALVAERSLTKPIFELRQVMALAEKGEFHHRMNRNTKDELGQLAIGFNHMMKQINELIAKVYQTEIREKDAEIKALQTQMNPHFIYNTLEHINMMAITKQAYELSDMVASLGRLIRYSIDQKTRFVPLREELAFVESYITIQQKRLEGKVTFSIAVPEAMRSLSIPKLILQPLIENAIEHGHQHGEWRGEISIKGWQDDAYSYIEVRDSGQGMKQETIERMKEEPERGTGNQVALGNISERLLLLLGEQAQLMIDSELGRGTKVTVRLPKT
>NZ_CP019985.1|WP_094425164.1|1984797_1985514_+|response-regulator
MYKVVIAEDEKMIRKGLVTIVDQLVTDFTVIGEADNGERALELLAHDCPDVLLTDIRMPKCDGLSLIREARSYYPHVKIVIVSGHEEFTYAQQAIQHGVSRYLLKPIDRTEVVLAFDEIKRGLVEPEQEDHENHLIQQVDSYIKTHIDQDITLQAVAKLVHLHPTYFSQWFKNETGQNFSTYVTQKRLERAETLLHQTNLRVYEVARMSGYQSEKHFMKLFKKEKRCTPTQYRQGALL
>NZ_CP019985.1|WP_094425162.1|1982944_1984741_+|hypothetical-protein
MKFPLKALTISVILLLAGLVLGDDRVEAHELPLFHFEKTLIEPSEMRYNPTGEVDFPTVIRAADYFENPLGTYYMYYGPHDAPGGIALAYADSVTGPWTEYASNPVISRNWQPYYNVSHVASAHPIWNEEEGKLFLYFHGENSVTRLASSEDGIHFDYEQVVIDTSDFTGISEASYARVFEHELDGKDNRYVMLLMGNHNGTRRIYLAWSADGREWEAQQEPLISPQPGQGGNLSGAYYFPYNGHHYVTVHGGSGNQYVVDVGENFDQEIHLGPYYQPSAVAPENGRAASRSYIYSEDELYMVYEAGQRGSTKIALARAIIGDERVEMASASLRLPSRVVSTNSEIDFEVLARRYDGTTIAENELSFSLFSSDSSVVRVDGQRLYSGGEGIAEVRAEVSYQGKVITTEAISIEVRHGEVWNVIDERFDDYTRRWQIAKGSAAQGTIEQGAGFVDIIENRRSGGAYHYLTYEGFYLPNSFYTLEAELSVFAPSQGNEISIREGNRQKSLFITYDGKQGFIQDRLLQPTVAVEIDPTERARYKLVSTGQTTYDVYRNDEFLFRSTSVSQAGQNLVKVGADSQGSAALRVDALRMQTNTAR
>NZ_CP019985.1|WP_094425160.1|1982515_1982713_-|hypothetical-protein
MSAKSKNSIEMQLLNGFVILVGLLLIFSVGHNLYVGEFNWTLLIFLAAIFAWVVFWRGFRKKRNE
>NZ_CP019985.1|WP_094425156.1|1979375_1980251_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MNNSDLFSLSYMPLLIRLQCCESVRLPRYLGSTLHGVMGWILSTDNEAYQYIFENRRYGGGKQDIVNPYILEPPRYQEVYNKGDMLCFKFILLGKAVSYTKSVVEALVNAEQFEIGAERKKFELMDIMQADRLEPIWHSSILNKEPAATNMLATWEQRGISKCSVHLLTPLRIRRGGEQLREIDFPTIIRSITRRVEALTSRYGGYVDSDMIFSACETASLVQTTSSGLYWSEISRYSNRRKKKMDFGGLLGAMTFEGDMYHFAPWLYAASCLHIGRNVTFGYGQLDVVFG
>NZ_CP019985.1|WP_094425154.1|1978567_1979383_+|hypothetical-protein
MTRQSPRKYHYRMKTYSTLVLSPRDHQGFYKAAGDFALEDLDKRASEHVKKDRVNIIYPFYQYGTYPRYAPAETQYYIPGSSIKGALTRIGAEEGKPSLTIDDIRVKNEDIQLYHLQKVQNLSEEDAPTEIDEFFPNVAVEVLRANSEYAGELFYDASRSEYKPEHYFREADQATRTKLKQLIQKIKEIWEQEIKGEDRFILNELRNNVQAILDEPKADNSNSYLLILGGYKGLMLSVISGRDGYKSAIYLDKMNRLPHGLVQVTLERSSE
>NZ_CP019985.1|WP_094425176.1|1994082_1995408_-|6-phospho-alpha-glucosidase
MKTFNITIAGGGSTFTPGIILMLLDYLDEFPIDTIKLYDNDGDRQKTIADACAILLKERAPEIRLLASTNPEEAFTNIDFVMAHIRVGKYAMRELDEKIPLKHGVVGQETCGPGGIAYGMRSIPGVLELIDYMETYSPEAWMLNYSNPAAIVAEATRKLRPHSKVLNICDMPIGIEELIAKNLGFASRKEMEVDYYGLNHFGWWTDIRDKNGNSLMPDVVKHVSQHGYATDGTSELEQQESWNSTLKKAREVQALDPKTVPNTYLKYYLYPDYEVAHSNKEYTRANEVMEGREKFVFGECQAIIDKGTAKETKLVIDEHASYIVDLAKAIAFNTKERMLMIVENNGAIPNFDPTAMVEIPCIVGSNGPEKLVVGEIPRFQKSLMEQQVGVEKLVVEAFEEGSYQKLWQAITLSKTVPSAKVAKDILDDLIEANKAFWPALK
>NZ_CP019985.1|WP_094425178.1|1995434_1997018_-|PTS-transporter-subunit-EIIC
MNAIKRFGSAMIVPVLLFAFFGIVVGLATLFKNPAIMGDIAAEGTMWYKVWSLIESGGWTIFNHMELAFVIGLPISLAKKAQARATLAALMVYLVFNNFINAILTLWPSTFGVDLSQGVENITGVKEIAGIPTLDTNIIGAIIISAIVIWIHNRFYDQKLPEMLGIFQGLVFVVIIGFFVMIPFAFLVAFVWPYVQQGIGSLQGFISQAGYVGVWLFHFLERVLIPTGLHHFIYTPFEFGPAAVNEGLKPYWIANLNDFATSTAALKDLYPYGFLLHGNIKMFGCFGIALAMYFSTPKENRKKVLALVLPATLTAIFAGITEPLEFTFLFIAPYLFVIHALLGATMVTLMNMFGVVGMMGGGLIEIAALNWIPLASNHGGIYIVQAMIGLIFAALYFVLFRWMIVKFDIPLPGRKKEEEARLYTKQDYQKAKKGSNSEKQAAAIYESEYEEKAVYYLEGLGGKENIKDVTNCATRLRVTVIDPSLVKDSDYFTNNKMAHGLAKSGQSVQIIVGLSVPQVRDSFEAKL
>NZ_CP019985.1|WP_094425180.1|1997162_1997921_+|MurR/RpiR-family-transcriptional-regulator
MILDKLVNKHFESLSENDLHIIKTIYDHIDEMKTMKIQDLAAYAHTSISSIHRLTKKIGLDGYSDLKSYIKLNNFTEGTSQDLMELLDQDIHQTRKYMEQLDFCQLNQLIDRAPYIYIYGTGAAQLDLANDVQRQLWTLHKKSQVIRSERDFTNGLGEMGEDDLLFIISLSGESENLDEIIHAIKTRKIKCVSLTTLRNNLLAQNAMFNIYVNSTPFCLYNKVENSSFLPFYIVVDIIVRKFSEWKMEQVGK
>NZ_CP019985.1|WP_094425182.1|1998178_1998646_+|DUF5381-family-protein
MNAISYRKSVAWGKALGSLVFVLVCLFLLYGAFFMDTTWIRTFFCITSAIIGIPFFGGYLVVCLPRALKSNTQLLTYDQKSISDGKKTVAWVDIENISYSGPSFQKWLFPQFPQLIFHLKNRETWTVSTYYLLTDSDIQSVLKLLRGLLSRNGKK
>NZ_CP019985.1|WP_094425184.1|1998720_1999458_+|SMI1/KNR4-family-protein
MKASIENLLRLLGDQHEAHHGIPESEIEAKERELGFSLPLVLRNYYKALGRSPHITQGCNNQYEPLQLKKLFIPDSTFFTTDKAFLVFYQVEESVIYCGIRLDDLEREDPPVYLCAWSFADWQLENQSLSRFLAGKALIQLGVEDRLPYWAIFDESTWDLFDYRDWMRLDDREDEIEEGSELNTWKIFVKDDVLIVFELSGSEEEGEAPLAVYLASFKQTSMENLLNELEKAANLPAYRTSLFEH
>NZ_CP019985.1|WP_094425186.1|1999500_2000034_+|HXXEE-domain-containing-protein
MIEALNQSVSIPSLIWLFLAFFMIHDFEEIIFVEGWAKKRYESVYQTIPSFYKPIFRIFNGITSSQFAFAVFIEFIIFIPVTYLAAEQQMFTWFLGYNVIFFLHVFTHAGQALLLKMYTPGVITAIIVTLPYSLYLFYRLAMEYNIQINDLIASIPYGLTIIPIVAFGHLLAKTVVR
>NZ_CP019985.1|WP_094423738.1|2002271_2003395_+|IS3-family-transposase
MTEAKRPRRRFTAEFKKQLVQLYASGKPRAEIIREYELTPSAFDKWVRQYQTSGAFTEKENRTPEQEELIRLRKENQKLAMENDILKQAALIMGRKLDVIRQNRGIYPVAAMCAILNIPRSTFYYEAKQRDHEEEEEQLTALISDLFRQSRGIYGQRKIKKELTKQGWTVSRRRIGRIMKAQGLVSTYTVAQFKPTKFVCNESEIGNTLDRKFQQEKALTVVVSDLTYVRVGANWHYICIIIDLYNREIIGYSSGPNKNKELVGQAIAKIPYPLQKIALFHTDRGREFINQKMDQTLATFGIARSLSNKGTPYDNAVAEATFKAIKIEFVSRRVFPNQHELDLALFDYVHWFNHIRLHGSLDYQSPVDYKALHL
>NZ_CP019985.1|WP_094425188.1|2004447_2004921_+|GNAT-family-N-acetyltransferase
MEIRTVKGSDYYVISPLINKWWGGRKMSDKLPKLFFDHFSNTSFVAERDGTLVGFLIGFFSQSHQKVAYIHFVGVHPDYRKQSVGNLLYNRFFHVVQQNGRNIVRCVTSPVNQTSIAFHTKMGFSIEEGDKTIDGVYVNTDYDGPHQDRVLFEKHLM
>NZ_CP019985.1|WP_094425190.1|2005084_2006029_-|hypothetical-protein
MIHILCANPALDRTIYVQAFYPNGVTRSRASHEGLGGKGFNVALPFIVANEQKTIHMHTFFGGPVGEQLAQMMKKAQLAGETTFIEGDNRYCTILVNESKQEAALINEQGPSITEKEQQQFLQSLFRSLKAGDHLVLSGSLPKGTPLTFYRDIIAQAESRGVQTILDSSGDALAYGVEAKPWLIKINGEEFLDLMGVKEEATNRQQQIEECLKNSPYPNCIVTLGGEGTVAKINGDIWRVTLPPINVTNATASGDIFLGTFMREWRKTNDVKAALLAGSSLSLANCLHWLPTIDFSKAEQYQQKIHIERVDSAV
>NZ_CP019985.1|WP_094425192.1|2006211_2007000_+|DeoR/GlpR-transcriptional-regulator
MLPQERQDLIMKELYEYHSVKISELSSKLDVTRETIRKDLYELEEKGLIRKVHGGAVLNKANLETNYSSRKIVNEWEKRAIAKKAVEFVYDNDTIYIDYGTTALYFARELIMKKTGLTIVTNSLSLANELVEHSNFSIIIIGGNVRKNERSLYGPVANQTIANLYVDTGFFGIGALHPEVGYTNIHMGEAEVSRLMVQHSKRRVMMADYSKFGSIHMNKVAPIEEVDTLITDSKADAEMLKAIQEKARNVIVVEAEGGEGDE

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Crispr_ID: NZ_CP019985_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_5

1993558-1993911

TypeIII

I-C:NA

Consensus_repeat	Method
CGTGAGTGCGTGGATTGAAAT	CRT
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder

4 spacers

cas6

The CRISPR arrays of NZ_CP019985_5

>merge|NZ_CP019985|5|1993558-1993911|CRT,PILER-CR,CRISPRCasFinder
AACCTATCCATGGATTGAAATAATGGAAGCAGTAGTGTTTCCGCCTTTTCTAGGTCGTCGCACTCTACGTGAGTGCGTGGATTGAAATGCCGCTATTCGTTAGCTTGCCTTGCCCCGCGAAGGTCGCACTCTACGTGAGTGCGTGGATTGAAATTACAGTAGGGATGAAACCGAACGTCTTGGCCTGAGTCGCACTCTACGTGAGTGCGTGGATTGAAATCATATAGTCCTGCCAGAAAATTTTCAGGATGTCCGGTCGCACTCTTCGTGAGTGCGTGGATTGAAATCCGTTTTTAACATAATCCATCATGATGCGCTGAAAGTCGCACTCTATGTGAGTGCGTGGAAAATGTG

>NZ_CP019985|5|4|1993558-1993844|CRT
AACCTATCCATGGATTGAAAT	AATGGAAGCAGTAGTGTTTCCGCCTTTTCTAGGTCGTCGCACTCTA
CGTGAGTGCGTGGATTGAAAT	GCCGCTATTCGTTAGCTTGCCTTGCCCCGCGAAGGTCGCACTCTA
CGTGAGTGCGTGGATTGAAAT	TACAGTAGGGATGAAACCGAACGTCTTGGCCTGAGTCGCACTCTA
CGTGAGTGCGTGGATTGAAAT	CATATAGTCCTGCCAGAAAATTTTCAGGATGTCCGGTCGCACTCTT
CGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|5|4|1993614-1993844|PILER-CR
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	GCCGCTATTCGTTAGCTTGCCTTGCCCCGCGAAG
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	TACAGTAGGGATGAAACCGAACGTCTTGGCCTGA
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	CATATAGTCCTGCCAGAAAATTTTCAGGATGTCCG
GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|5|5|1993614-1993911|CRISPRCasFinder
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	GCCGCTATTCGTTAGCTTGCCTTGCCCCGCGAAG
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	TACAGTAGGGATGAAACCGAACGTCTTGGCCTGA
GTCGCACTCTACGTGAGTGCGTGGATTGAAAT	CATATAGTCCTGCCAGAAAATTTTCAGGATGTCCG
GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT	CCGTTTTTAACATAATCCATCATGATGCGCTGAAA
GTCGCACTCTATGTGAGTGCGTGGAAAATGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	unknown	unknown	gnl\|CDD\|375146
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP019985.1\|WP_094425156.1\|1979375_1980251_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0091_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_CP019985.1\|WP_094425154.1\|1978567_1979383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273925
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238570
NZ_CP019985.1\|WP_094425162.1\|1982944_1984741_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350092
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019985.1\|WP_094425168.1\|1987358_1988624_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP019985.1\|WP_094425166.1\|1985534_1987268_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP019985.1\|WP_094425164.1\|1984797_1985514_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP019985.1\|WP_094425160.1\|1982515_1982713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.34009e-91
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	gnl\|CDD\|375146	pfam17353, DUF5381, Family of unknown function (DUF5381). This is a family of unknown function found in Bacillales.	8.48841e-06
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.14602e-147
NZ_CP019985.1\|WP_094425156.1\|1979375_1980251_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	2.90267e-06
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	1.56363e-66
NZ_CP019985.1\|WP_094425162.1\|1982944_1984741_+\|hypothetical-protein	gnl\|CDD\|350092	cd08978, GH_F, Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. GH62 are also predicted to be inverting enzymes. A common structural feature of both, GH43 and GH62 enzymes, is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	4.33016e-08
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.7095e-49
NZ_CP019985.1\|WP_094425168.1\|1987358_1988624_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.19875e-65
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.86719e-94
NZ_CP019985.1\|WP_094425166.1\|1985534_1987268_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.38217e-54
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	8.48856e-16
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.000400655
NZ_CP019985.1\|WP_094425164.1\|1984797_1985514_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.50511e-53
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.29441e-89
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.80346e-18
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.07982e-36

>NZ_CP019985.1|WP_157730388.1|1990422_1991787_+|FAD-dependent-oxidoreductase
MRQVTEIEKQIRVRAEADVVVCGGGPAGIGAALSAARNGAKTILLEAHGFLGGMGTAGMVTSFAYGYHDKERFITGGIFQEIRQKLHDRGGLIMTDRKGWEPFNAEQYKILAFELLAEAGVELLCHTTVVDTITKAGTIEAIIIESKAGREALLATHVIDATGDGDVAERAGALCKIGRDKDGGTQPSSLMYVLGNVDTEALGEKLDQEGRRGYWKTEDGYRYVNATGFADEIEQAKRDGFLTKVNRDHIAAIFTVPWVDNVVGINFGRIQGKNALDPQDLTDAEVIGREQVLDGIAFLKEYVPGFKRAELLQTAPQVGIRETRRVIGDYVITQEDIVELKQFDDCIAQSCYMIDIHSPDSSTTEIYKLPKGTHYDIPYRALLPQGLNNLLVAGRCISATHEALGSFRVQAICLAIGEAAGAAAAIATKEKCLPREIDVTHLQDTLVNQGAILS
>NZ_CP019985.1|WP_094425172.1|1989562_1990396_+|carbohydrate-ABC-transporter-permease
MKINSVSTVVRYGLLTIISAIMLLPFIWMVTTSLKDPNQIFALPPTFIPNPIQWDSYLNVLSSTHFLRQMFNSIYIGAAVTIGTVLLASLAGYAFARIPFKGRNVVFLAFLSVMMIPGEVTIIPLFLFMRELGWIDTHLPLMIIPIFGAGGAFGIFVMRQFFKQVPAELEDAARIDGCSRFRIFVQIMLPLSKPALATVTIFTFLTNWNEFLEPLIFINSRELMTLPLALSLFTDEAGTDWSSLMSASVLATLPVLTVFFFAQKQFIESLAMSGSKE
>NZ_CP019985.1|WP_094425170.1|1988643_1989573_+|sugar-ABC-transporter-permease
MNADVQAEWRQKKKRPRKPMFKRDELAGWLFISPMLLGFTIFMFIPIGFAFYMSFTDWPLLGQSEFIGTANYQAIVQDPEFQKVMKNTVLFTAGLVPFNIILALGLALLLRHPLPGMGLFRTIVFVPVVTTLVVWAIVWRYMFATDFGFINSILAWFGIEPQAYLYNKNLAMPVVILTSVLKNVGLNMVLFLAALQMVPKNLYEAARIDGAGSWRQFKNITLPIISPTVFLATIITIIGAMKIFAQIFVMTKGGPESSTKVIVYYIWEKAFRLFDMGYASAAAFILFFVIFAFTLIQWWLRKRWVYNED
>NZ_CP019985.1|WP_094425168.1|1987358_1988624_+|sugar-ABC-transporter-substrate-binding-protein
MKRWSISAGLLLVVAGCSSSGGSTDANGDEQIELTFSTWGNENHIAVYEELLEAYYVDHPNIHVTIQTTPFPDYQQNMTVLAAGQELPDIGWAAERMVPQFIENNILADLSALREDESFHFEDILPGTITQYEVGDALYGVPFSSPPHIIFYNKTLFEKNGLETPQELESRGEWTWEAFEEAAAVIAEEEGVYGANFFRAWETWENLLAHTRAEGGDLFNEDTTEFTWNSEAGISTLEMLDRMMFEDRSHPRAGDQVAFEAGNVGMFFDVYSYVSTARGIEDFEWDIAPVPLGSQGRSPILGQAGYVMFEGTEHPEEALDLIRYFASETGMEATSTYFAPPRVSVLESDAFIEQPGNPPRESMESTILNLSEESRVLPIHPEWQNIDNHILQGFDHLFGQTAEPADILEQMEASINPLVQE
>NZ_CP019985.1|WP_094425166.1|1985534_1987268_+|sensor-histidine-kinase
MSLRPKIILLFLSIVLVPLNLLGMITYAYFSKTLEDQTYHYTVQVIGQVNQNVNAYIDEMHRLSLLPLYDRDILAILKNRSDVHHSYYPQTEEFERMSSFLSTLSYNRQELSGIHIITRDGSLFSDLGSPRTVHRLAEGASDWQEAIEAGNGASLLLPTHSPSYILGAEKSVFSVGRLLRDPDGFRPLGMIKVDIELSFIESLLEDVDLSEDASITMIDRNGEPIYETGKAIYPLLKAKGEDVWQLAERESITVDGVDYLPVIRNDSSGDVQTVVFLPEHHIVGASQSLRLFTIGLMLAVSAVVIMLALVAERSLTKPIFELRQVMALAEKGEFHHRMNRNTKDELGQLAIGFNHMMKQINELIAKVYQTEIREKDAEIKALQTQMNPHFIYNTLEHINMMAITKQAYELSDMVASLGRLIRYSIDQKTRFVPLREELAFVESYITIQQKRLEGKVTFSIAVPEAMRSLSIPKLILQPLIENAIEHGHQHGEWRGEISIKGWQDDAYSYIEVRDSGQGMKQETIERMKEEPERGTGNQVALGNISERLLLLLGEQAQLMIDSELGRGTKVTVRLPKT
>NZ_CP019985.1|WP_094425164.1|1984797_1985514_+|response-regulator
MYKVVIAEDEKMIRKGLVTIVDQLVTDFTVIGEADNGERALELLAHDCPDVLLTDIRMPKCDGLSLIREARSYYPHVKIVIVSGHEEFTYAQQAIQHGVSRYLLKPIDRTEVVLAFDEIKRGLVEPEQEDHENHLIQQVDSYIKTHIDQDITLQAVAKLVHLHPTYFSQWFKNETGQNFSTYVTQKRLERAETLLHQTNLRVYEVARMSGYQSEKHFMKLFKKEKRCTPTQYRQGALL
>NZ_CP019985.1|WP_094425162.1|1982944_1984741_+|hypothetical-protein
MKFPLKALTISVILLLAGLVLGDDRVEAHELPLFHFEKTLIEPSEMRYNPTGEVDFPTVIRAADYFENPLGTYYMYYGPHDAPGGIALAYADSVTGPWTEYASNPVISRNWQPYYNVSHVASAHPIWNEEEGKLFLYFHGENSVTRLASSEDGIHFDYEQVVIDTSDFTGISEASYARVFEHELDGKDNRYVMLLMGNHNGTRRIYLAWSADGREWEAQQEPLISPQPGQGGNLSGAYYFPYNGHHYVTVHGGSGNQYVVDVGENFDQEIHLGPYYQPSAVAPENGRAASRSYIYSEDELYMVYEAGQRGSTKIALARAIIGDERVEMASASLRLPSRVVSTNSEIDFEVLARRYDGTTIAENELSFSLFSSDSSVVRVDGQRLYSGGEGIAEVRAEVSYQGKVITTEAISIEVRHGEVWNVIDERFDDYTRRWQIAKGSAAQGTIEQGAGFVDIIENRRSGGAYHYLTYEGFYLPNSFYTLEAELSVFAPSQGNEISIREGNRQKSLFITYDGKQGFIQDRLLQPTVAVEIDPTERARYKLVSTGQTTYDVYRNDEFLFRSTSVSQAGQNLVKVGADSQGSAALRVDALRMQTNTAR
>NZ_CP019985.1|WP_094425160.1|1982515_1982713_-|hypothetical-protein
MSAKSKNSIEMQLLNGFVILVGLLLIFSVGHNLYVGEFNWTLLIFLAAIFAWVVFWRGFRKKRNE
>NZ_CP019985.1|WP_094425156.1|1979375_1980251_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MNNSDLFSLSYMPLLIRLQCCESVRLPRYLGSTLHGVMGWILSTDNEAYQYIFENRRYGGGKQDIVNPYILEPPRYQEVYNKGDMLCFKFILLGKAVSYTKSVVEALVNAEQFEIGAERKKFELMDIMQADRLEPIWHSSILNKEPAATNMLATWEQRGISKCSVHLLTPLRIRRGGEQLREIDFPTIIRSITRRVEALTSRYGGYVDSDMIFSACETASLVQTTSSGLYWSEISRYSNRRKKKMDFGGLLGAMTFEGDMYHFAPWLYAASCLHIGRNVTFGYGQLDVVFG
>NZ_CP019985.1|WP_094425154.1|1978567_1979383_+|hypothetical-protein
MTRQSPRKYHYRMKTYSTLVLSPRDHQGFYKAAGDFALEDLDKRASEHVKKDRVNIIYPFYQYGTYPRYAPAETQYYIPGSSIKGALTRIGAEEGKPSLTIDDIRVKNEDIQLYHLQKVQNLSEEDAPTEIDEFFPNVAVEVLRANSEYAGELFYDASRSEYKPEHYFREADQATRTKLKQLIQKIKEIWEQEIKGEDRFILNELRNNVQAILDEPKADNSNSYLLILGGYKGLMLSVISGRDGYKSAIYLDKMNRLPHGLVQVTLERSSE
>NZ_CP019985.1|WP_094425176.1|1994082_1995408_-|6-phospho-alpha-glucosidase
MKTFNITIAGGGSTFTPGIILMLLDYLDEFPIDTIKLYDNDGDRQKTIADACAILLKERAPEIRLLASTNPEEAFTNIDFVMAHIRVGKYAMRELDEKIPLKHGVVGQETCGPGGIAYGMRSIPGVLELIDYMETYSPEAWMLNYSNPAAIVAEATRKLRPHSKVLNICDMPIGIEELIAKNLGFASRKEMEVDYYGLNHFGWWTDIRDKNGNSLMPDVVKHVSQHGYATDGTSELEQQESWNSTLKKAREVQALDPKTVPNTYLKYYLYPDYEVAHSNKEYTRANEVMEGREKFVFGECQAIIDKGTAKETKLVIDEHASYIVDLAKAIAFNTKERMLMIVENNGAIPNFDPTAMVEIPCIVGSNGPEKLVVGEIPRFQKSLMEQQVGVEKLVVEAFEEGSYQKLWQAITLSKTVPSAKVAKDILDDLIEANKAFWPALK
>NZ_CP019985.1|WP_094425178.1|1995434_1997018_-|PTS-transporter-subunit-EIIC
MNAIKRFGSAMIVPVLLFAFFGIVVGLATLFKNPAIMGDIAAEGTMWYKVWSLIESGGWTIFNHMELAFVIGLPISLAKKAQARATLAALMVYLVFNNFINAILTLWPSTFGVDLSQGVENITGVKEIAGIPTLDTNIIGAIIISAIVIWIHNRFYDQKLPEMLGIFQGLVFVVIIGFFVMIPFAFLVAFVWPYVQQGIGSLQGFISQAGYVGVWLFHFLERVLIPTGLHHFIYTPFEFGPAAVNEGLKPYWIANLNDFATSTAALKDLYPYGFLLHGNIKMFGCFGIALAMYFSTPKENRKKVLALVLPATLTAIFAGITEPLEFTFLFIAPYLFVIHALLGATMVTLMNMFGVVGMMGGGLIEIAALNWIPLASNHGGIYIVQAMIGLIFAALYFVLFRWMIVKFDIPLPGRKKEEEARLYTKQDYQKAKKGSNSEKQAAAIYESEYEEKAVYYLEGLGGKENIKDVTNCATRLRVTVIDPSLVKDSDYFTNNKMAHGLAKSGQSVQIIVGLSVPQVRDSFEAKL
>NZ_CP019985.1|WP_094425180.1|1997162_1997921_+|MurR/RpiR-family-transcriptional-regulator
MILDKLVNKHFESLSENDLHIIKTIYDHIDEMKTMKIQDLAAYAHTSISSIHRLTKKIGLDGYSDLKSYIKLNNFTEGTSQDLMELLDQDIHQTRKYMEQLDFCQLNQLIDRAPYIYIYGTGAAQLDLANDVQRQLWTLHKKSQVIRSERDFTNGLGEMGEDDLLFIISLSGESENLDEIIHAIKTRKIKCVSLTTLRNNLLAQNAMFNIYVNSTPFCLYNKVENSSFLPFYIVVDIIVRKFSEWKMEQVGK
>NZ_CP019985.1|WP_094425182.1|1998178_1998646_+|DUF5381-family-protein
MNAISYRKSVAWGKALGSLVFVLVCLFLLYGAFFMDTTWIRTFFCITSAIIGIPFFGGYLVVCLPRALKSNTQLLTYDQKSISDGKKTVAWVDIENISYSGPSFQKWLFPQFPQLIFHLKNRETWTVSTYYLLTDSDIQSVLKLLRGLLSRNGKK
>NZ_CP019985.1|WP_094425184.1|1998720_1999458_+|SMI1/KNR4-family-protein
MKASIENLLRLLGDQHEAHHGIPESEIEAKERELGFSLPLVLRNYYKALGRSPHITQGCNNQYEPLQLKKLFIPDSTFFTTDKAFLVFYQVEESVIYCGIRLDDLEREDPPVYLCAWSFADWQLENQSLSRFLAGKALIQLGVEDRLPYWAIFDESTWDLFDYRDWMRLDDREDEIEEGSELNTWKIFVKDDVLIVFELSGSEEEGEAPLAVYLASFKQTSMENLLNELEKAANLPAYRTSLFEH
>NZ_CP019985.1|WP_094425186.1|1999500_2000034_+|HXXEE-domain-containing-protein
MIEALNQSVSIPSLIWLFLAFFMIHDFEEIIFVEGWAKKRYESVYQTIPSFYKPIFRIFNGITSSQFAFAVFIEFIIFIPVTYLAAEQQMFTWFLGYNVIFFLHVFTHAGQALLLKMYTPGVITAIIVTLPYSLYLFYRLAMEYNIQINDLIASIPYGLTIIPIVAFGHLLAKTVVR
>NZ_CP019985.1|WP_094423738.1|2002271_2003395_+|IS3-family-transposase
MTEAKRPRRRFTAEFKKQLVQLYASGKPRAEIIREYELTPSAFDKWVRQYQTSGAFTEKENRTPEQEELIRLRKENQKLAMENDILKQAALIMGRKLDVIRQNRGIYPVAAMCAILNIPRSTFYYEAKQRDHEEEEEQLTALISDLFRQSRGIYGQRKIKKELTKQGWTVSRRRIGRIMKAQGLVSTYTVAQFKPTKFVCNESEIGNTLDRKFQQEKALTVVVSDLTYVRVGANWHYICIIIDLYNREIIGYSSGPNKNKELVGQAIAKIPYPLQKIALFHTDRGREFINQKMDQTLATFGIARSLSNKGTPYDNAVAEATFKAIKIEFVSRRVFPNQHELDLALFDYVHWFNHIRLHGSLDYQSPVDYKALHL
>NZ_CP019985.1|WP_094425188.1|2004447_2004921_+|GNAT-family-N-acetyltransferase
MEIRTVKGSDYYVISPLINKWWGGRKMSDKLPKLFFDHFSNTSFVAERDGTLVGFLIGFFSQSHQKVAYIHFVGVHPDYRKQSVGNLLYNRFFHVVQQNGRNIVRCVTSPVNQTSIAFHTKMGFSIEEGDKTIDGVYVNTDYDGPHQDRVLFEKHLM
>NZ_CP019985.1|WP_094425190.1|2005084_2006029_-|hypothetical-protein
MIHILCANPALDRTIYVQAFYPNGVTRSRASHEGLGGKGFNVALPFIVANEQKTIHMHTFFGGPVGEQLAQMMKKAQLAGETTFIEGDNRYCTILVNESKQEAALINEQGPSITEKEQQQFLQSLFRSLKAGDHLVLSGSLPKGTPLTFYRDIIAQAESRGVQTILDSSGDALAYGVEAKPWLIKINGEEFLDLMGVKEEATNRQQQIEECLKNSPYPNCIVTLGGEGTVAKINGDIWRVTLPPINVTNATASGDIFLGTFMREWRKTNDVKAALLAGSSLSLANCLHWLPTIDFSKAEQYQQKIHIERVDSAV
>NZ_CP019985.1|WP_094425192.1|2006211_2007000_+|DeoR/GlpR-transcriptional-regulator
MLPQERQDLIMKELYEYHSVKISELSSKLDVTRETIRKDLYELEEKGLIRKVHGGAVLNKANLETNYSSRKIVNEWEKRAIAKKAVEFVYDNDTIYIDYGTTALYFARELIMKKTGLTIVTNSLSLANELVEHSNFSIIIIGGNVRKNERSLYGPVANQTIANLYVDTGFFGIGALHPEVGYTNIHMGEAEVSRLMVQHSKRRVMMADYSKFGSIHMNKVAPIEEVDTLITDSKADAEMLKAIQEKARNVIVVEAEGGEGDE

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Crispr_ID: NZ_CP019985_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_6

2000277-2002155

Orphan

I-C

Consensus_repeat	Method
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CRT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	PILER-CR

28 spacers

The CRISPR arrays of NZ_CP019985_6

>merge|NZ_CP019985|6|2000277-2002155|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGTTAATGTCCGCGCTCTTACCGCACTTATTACATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCCGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACTATACTCGCTCCTTTATCACGCCAATGGCGCTTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCGACAAAAAAGCGCCCGCCTGCGCCACTAGCGCTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATGTAGACACATTAATTCGCGCGCTATACATCGGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATTCAGAATTATGTCAGTATATCCAACAACTACGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCGGGAAAGGGTGTTCATTATCGGACATCTTAGAGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTGCAATCGAAGAACTCACAAAGCGTCGCGATGGTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATCATGTTAATGTCGTTTAACGAGTCGCCGCACTCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGATCAGGAAACGGAGCGCACAGCCCGCAAAATGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCGTTTCGATTTAAGGGATTCTCACCCACGCCAAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTATATGAAGACTCAGTATAACGTATTTGTTAACGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGGAAATGGATAAAAAAAGTCATGCGAAATCCATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGCCGACGCCTATACATGAAGTGCCGGGAGGGCCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACCAGCTACCCAATCACTAAACCTTTCCGCCTCCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCTTGCTTATTTGCAATGTTAGGTGGTGTCCATCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGCGGAGGAAGGGGACGTCATCGAACTTGAGGCGCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAAGCTGAACGGACAGTCAGGTAAATTACGCTCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCTACCTTACCCCTTGTCTTTAGCTGCCCCTCAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAAGCTGAACGGACAGTCAGGTAAATTACGCTCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCTACCTTACCCCTTGTCTTTAGCTGCCCCTCAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACAAAAGACTAGCAACAGTGTCACAGACAGAAACGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATT

>NZ_CP019985|6|5|2000277-2000575|PILER-CR
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTAATGTCCGCGCTCTTACCGCACTTATTACA
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCC
GGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTATACTCGCTCCTTTATCACGCCAATGGCGCT
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGACAAAAAAGCGCCCGCCTGCGCCACTAGCGC
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATGTAGACACATTAATTCGCGCGCTATACATCGGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATTCAGAATTATGTCAGTATATCCAACAACTACGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGGGAAAGGGTGTTCATTATCGGACATCTTAGAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAATCGAAGAACTCACAAAGCGTCGCGATGGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCATGTTAATGTCGTTTAACGAGTCGCCGCACTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GATCAGGAAACGGAGCGCACAGCCCGCAAAATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGTTTCGATTTAAGGGATTCTCACCCACGCCAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TATATGAAGACTCAGTATAACGTATTTGTTAAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GGAAATGGATAAAAAAAGTCATGCGAAATCCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCGACGCCTATACATGAAGTGCCGGGAGGGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCAGCTACCCAATCACTAAACCTTTCCGCCTCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTGCTTATTTGCAATGTTAGGTGGTGTCCATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGGAGGAAGGGGACGTCATCGAACTTGAGGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACAAAAGACTAGCAACAGTGTCACAGACAGAAACG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCT


>NZ_CP019985|6|6|2000278-2002155|CRISPRCasFinder
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTAATGTCCGCGCTCTTACCGCACTTATTACAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCCG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTATACTCGCTCCTTTATCACGCCAATGGCGCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGACAAAAAAGCGCCCGCCTGCGCCACTAGCGCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATGTAGACACATTAATTCGCGCGCTATACATCGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTCAGAATTATGTCAGTATATCCAACAACTAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGGGAAAGGGTGTTCATTATCGGACATCTTAGAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAATCGAAGAACTCACAAAGCGTCGCGATGGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCATGTTAATGTCGTTTAACGAGTCGCCGCACTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GATCAGGAAACGGAGCGCACAGCCCGCAAAATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGTTTCGATTTAAGGGATTCTCACCCACGCCAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TATATGAAGACTCAGTATAACGTATTTGTTAAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GGAAATGGATAAAAAAAGTCATGCGAAATCCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCGACGCCTATACATGAAGTGCCGGGAGGGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCAGCTACCCAATCACTAAACCTTTCCGCCTCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTGCTTATTTGCAATGTTAGGTGGTGTCCATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGGAGGAAGGGGACGTCATCGAACTTGAGGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACAAAAGACTAGCAACAGTGTCACAGACAGAAACG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAATT

>NZ_CP019985|6|5|2000278-2002154|CRT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTAATGTCCGCGCTCTTACCGCACTTATTACAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCCG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTATACTCGCTCCTTTATCACGCCAATGGCGCTT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGACAAAAAAGCGCCCGCCTGCGCCACTAGCGCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATGTAGACACATTAATTCGCGCGCTATACATCGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATTCAGAATTATGTCAGTATATCCAACAACTAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGGGAAAGGGTGTTCATTATCGGACATCTTAGAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAATCGAAGAACTCACAAAGCGTCGCGATGGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCATGTTAATGTCGTTTAACGAGTCGCCGCACTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GATCAGGAAACGGAGCGCACAGCCCGCAAAATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGTTTCGATTTAAGGGATTCTCACCCACGCCAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TATATGAAGACTCAGTATAACGTATTTGTTAAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GGAAATGGATAAAAAAAGTCATGCGAAATCCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCGACGCCTATACATGAAGTGCCGGGAGGGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCAGCTACCCAATCACTAAACCTTTCCGCCTCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTGCTTATTTGCAATGTTAGGTGGTGTCCATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGGAGGAAGGGGACGTCATCGAACTTGAGGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACAAAAGACTAGCAACAGTGTCACAGACAGAAACG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|6|6|2000675-2002154|PILER-CR
	GTTAATGTCCGCGCTCTTACCGCACTTATTACA
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCC
GGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACTATACTCGCTCCTTTATCACGCCAATGGCGCT
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGACAAAAAAGCGCCCGCCTGCGCCACTAGCGC
TGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATGTAGACACATTAATTCGCGCGCTATACATCGGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATATTCAGAATTATGTCAGTATATCCAACAACTACGTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGGGAAAGGGTGTTCATTATCGGACATCTTAGAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGCAATCGAAGAACTCACAAAGCGTCGCGATGGT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ATCATGTTAATGTCGTTTAACGAGTCGCCGCACTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GATCAGGAAACGGAGCGCACAGCCCGCAAAATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGTTTCGATTTAAGGGATTCTCACCCACGCCAA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TATATGAAGACTCAGTATAACGTATTTGTTAAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GGAAATGGATAAAAAAAGTCATGCGAAATCCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCGACGCCTATACATGAAGTGCCGGGAGGGCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACCAGCTACCCAATCACTAAACCTTTCCGCCTCC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTTGCTTATTTGCAATGTTAGGTGGTGTCCATC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGGAGGAAGGGGACGTCATCGAACTTGAGGCGC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAAGCTGAACGGACAGTCAGGTAAATTACGCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACAAAAGACTAGCAACAGTGTCACAGACAGAAACG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	unknown	unknown	gnl\|CDD\|375146
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238570
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP019985.1\|WP_094425168.1\|1987358_1988624_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|334031
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273925
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.34009e-91
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	gnl\|CDD\|375146	pfam17353, DUF5381, Family of unknown function (DUF5381). This is a family of unknown function found in Bacillales.	8.48841e-06
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.20879e-38
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.7095e-49
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.11588e-130
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.71198e-29
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	1.56363e-66
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.14602e-147
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	9.912e-163
NZ_CP019985.1\|WP_094425168.1\|1987358_1988624_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.19875e-65
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.86719e-94
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	5.68871e-35
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.000400655
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	8.48856e-16
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.29441e-89
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	6.52236e-164
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.80346e-18
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.07982e-36

>NZ_CP019985.1|WP_094425186.1|1999500_2000034_+|HXXEE-domain-containing-protein
MIEALNQSVSIPSLIWLFLAFFMIHDFEEIIFVEGWAKKRYESVYQTIPSFYKPIFRIFNGITSSQFAFAVFIEFIIFIPVTYLAAEQQMFTWFLGYNVIFFLHVFTHAGQALLLKMYTPGVITAIIVTLPYSLYLFYRLAMEYNIQINDLIASIPYGLTIIPIVAFGHLLAKTVVR
>NZ_CP019985.1|WP_094425184.1|1998720_1999458_+|SMI1/KNR4-family-protein
MKASIENLLRLLGDQHEAHHGIPESEIEAKERELGFSLPLVLRNYYKALGRSPHITQGCNNQYEPLQLKKLFIPDSTFFTTDKAFLVFYQVEESVIYCGIRLDDLEREDPPVYLCAWSFADWQLENQSLSRFLAGKALIQLGVEDRLPYWAIFDESTWDLFDYRDWMRLDDREDEIEEGSELNTWKIFVKDDVLIVFELSGSEEEGEAPLAVYLASFKQTSMENLLNELEKAANLPAYRTSLFEH
>NZ_CP019985.1|WP_094425182.1|1998178_1998646_+|DUF5381-family-protein
MNAISYRKSVAWGKALGSLVFVLVCLFLLYGAFFMDTTWIRTFFCITSAIIGIPFFGGYLVVCLPRALKSNTQLLTYDQKSISDGKKTVAWVDIENISYSGPSFQKWLFPQFPQLIFHLKNRETWTVSTYYLLTDSDIQSVLKLLRGLLSRNGKK
>NZ_CP019985.1|WP_094425180.1|1997162_1997921_+|MurR/RpiR-family-transcriptional-regulator
MILDKLVNKHFESLSENDLHIIKTIYDHIDEMKTMKIQDLAAYAHTSISSIHRLTKKIGLDGYSDLKSYIKLNNFTEGTSQDLMELLDQDIHQTRKYMEQLDFCQLNQLIDRAPYIYIYGTGAAQLDLANDVQRQLWTLHKKSQVIRSERDFTNGLGEMGEDDLLFIISLSGESENLDEIIHAIKTRKIKCVSLTTLRNNLLAQNAMFNIYVNSTPFCLYNKVENSSFLPFYIVVDIIVRKFSEWKMEQVGK
>NZ_CP019985.1|WP_094425178.1|1995434_1997018_-|PTS-transporter-subunit-EIIC
MNAIKRFGSAMIVPVLLFAFFGIVVGLATLFKNPAIMGDIAAEGTMWYKVWSLIESGGWTIFNHMELAFVIGLPISLAKKAQARATLAALMVYLVFNNFINAILTLWPSTFGVDLSQGVENITGVKEIAGIPTLDTNIIGAIIISAIVIWIHNRFYDQKLPEMLGIFQGLVFVVIIGFFVMIPFAFLVAFVWPYVQQGIGSLQGFISQAGYVGVWLFHFLERVLIPTGLHHFIYTPFEFGPAAVNEGLKPYWIANLNDFATSTAALKDLYPYGFLLHGNIKMFGCFGIALAMYFSTPKENRKKVLALVLPATLTAIFAGITEPLEFTFLFIAPYLFVIHALLGATMVTLMNMFGVVGMMGGGLIEIAALNWIPLASNHGGIYIVQAMIGLIFAALYFVLFRWMIVKFDIPLPGRKKEEEARLYTKQDYQKAKKGSNSEKQAAAIYESEYEEKAVYYLEGLGGKENIKDVTNCATRLRVTVIDPSLVKDSDYFTNNKMAHGLAKSGQSVQIIVGLSVPQVRDSFEAKL
>NZ_CP019985.1|WP_094425176.1|1994082_1995408_-|6-phospho-alpha-glucosidase
MKTFNITIAGGGSTFTPGIILMLLDYLDEFPIDTIKLYDNDGDRQKTIADACAILLKERAPEIRLLASTNPEEAFTNIDFVMAHIRVGKYAMRELDEKIPLKHGVVGQETCGPGGIAYGMRSIPGVLELIDYMETYSPEAWMLNYSNPAAIVAEATRKLRPHSKVLNICDMPIGIEELIAKNLGFASRKEMEVDYYGLNHFGWWTDIRDKNGNSLMPDVVKHVSQHGYATDGTSELEQQESWNSTLKKAREVQALDPKTVPNTYLKYYLYPDYEVAHSNKEYTRANEVMEGREKFVFGECQAIIDKGTAKETKLVIDEHASYIVDLAKAIAFNTKERMLMIVENNGAIPNFDPTAMVEIPCIVGSNGPEKLVVGEIPRFQKSLMEQQVGVEKLVVEAFEEGSYQKLWQAITLSKTVPSAKVAKDILDDLIEANKAFWPALK
>NZ_CP019985.1|WP_157730388.1|1990422_1991787_+|FAD-dependent-oxidoreductase
MRQVTEIEKQIRVRAEADVVVCGGGPAGIGAALSAARNGAKTILLEAHGFLGGMGTAGMVTSFAYGYHDKERFITGGIFQEIRQKLHDRGGLIMTDRKGWEPFNAEQYKILAFELLAEAGVELLCHTTVVDTITKAGTIEAIIIESKAGREALLATHVIDATGDGDVAERAGALCKIGRDKDGGTQPSSLMYVLGNVDTEALGEKLDQEGRRGYWKTEDGYRYVNATGFADEIEQAKRDGFLTKVNRDHIAAIFTVPWVDNVVGINFGRIQGKNALDPQDLTDAEVIGREQVLDGIAFLKEYVPGFKRAELLQTAPQVGIRETRRVIGDYVITQEDIVELKQFDDCIAQSCYMIDIHSPDSSTTEIYKLPKGTHYDIPYRALLPQGLNNLLVAGRCISATHEALGSFRVQAICLAIGEAAGAAAAIATKEKCLPREIDVTHLQDTLVNQGAILS
>NZ_CP019985.1|WP_094425172.1|1989562_1990396_+|carbohydrate-ABC-transporter-permease
MKINSVSTVVRYGLLTIISAIMLLPFIWMVTTSLKDPNQIFALPPTFIPNPIQWDSYLNVLSSTHFLRQMFNSIYIGAAVTIGTVLLASLAGYAFARIPFKGRNVVFLAFLSVMMIPGEVTIIPLFLFMRELGWIDTHLPLMIIPIFGAGGAFGIFVMRQFFKQVPAELEDAARIDGCSRFRIFVQIMLPLSKPALATVTIFTFLTNWNEFLEPLIFINSRELMTLPLALSLFTDEAGTDWSSLMSASVLATLPVLTVFFFAQKQFIESLAMSGSKE
>NZ_CP019985.1|WP_094425170.1|1988643_1989573_+|sugar-ABC-transporter-permease
MNADVQAEWRQKKKRPRKPMFKRDELAGWLFISPMLLGFTIFMFIPIGFAFYMSFTDWPLLGQSEFIGTANYQAIVQDPEFQKVMKNTVLFTAGLVPFNIILALGLALLLRHPLPGMGLFRTIVFVPVVTTLVVWAIVWRYMFATDFGFINSILAWFGIEPQAYLYNKNLAMPVVILTSVLKNVGLNMVLFLAALQMVPKNLYEAARIDGAGSWRQFKNITLPIISPTVFLATIITIIGAMKIFAQIFVMTKGGPESSTKVIVYYIWEKAFRLFDMGYASAAAFILFFVIFAFTLIQWWLRKRWVYNED
>NZ_CP019985.1|WP_094425168.1|1987358_1988624_+|sugar-ABC-transporter-substrate-binding-protein
MKRWSISAGLLLVVAGCSSSGGSTDANGDEQIELTFSTWGNENHIAVYEELLEAYYVDHPNIHVTIQTTPFPDYQQNMTVLAAGQELPDIGWAAERMVPQFIENNILADLSALREDESFHFEDILPGTITQYEVGDALYGVPFSSPPHIIFYNKTLFEKNGLETPQELESRGEWTWEAFEEAAAVIAEEEGVYGANFFRAWETWENLLAHTRAEGGDLFNEDTTEFTWNSEAGISTLEMLDRMMFEDRSHPRAGDQVAFEAGNVGMFFDVYSYVSTARGIEDFEWDIAPVPLGSQGRSPILGQAGYVMFEGTEHPEEALDLIRYFASETGMEATSTYFAPPRVSVLESDAFIEQPGNPPRESMESTILNLSEESRVLPIHPEWQNIDNHILQGFDHLFGQTAEPADILEQMEASINPLVQE
>NZ_CP019985.1|WP_094423738.1|2002271_2003395_+|IS3-family-transposase
MTEAKRPRRRFTAEFKKQLVQLYASGKPRAEIIREYELTPSAFDKWVRQYQTSGAFTEKENRTPEQEELIRLRKENQKLAMENDILKQAALIMGRKLDVIRQNRGIYPVAAMCAILNIPRSTFYYEAKQRDHEEEEEQLTALISDLFRQSRGIYGQRKIKKELTKQGWTVSRRRIGRIMKAQGLVSTYTVAQFKPTKFVCNESEIGNTLDRKFQQEKALTVVVSDLTYVRVGANWHYICIIIDLYNREIIGYSSGPNKNKELVGQAIAKIPYPLQKIALFHTDRGREFINQKMDQTLATFGIARSLSNKGTPYDNAVAEATFKAIKIEFVSRRVFPNQHELDLALFDYVHWFNHIRLHGSLDYQSPVDYKALHL
>NZ_CP019985.1|WP_094425188.1|2004447_2004921_+|GNAT-family-N-acetyltransferase
MEIRTVKGSDYYVISPLINKWWGGRKMSDKLPKLFFDHFSNTSFVAERDGTLVGFLIGFFSQSHQKVAYIHFVGVHPDYRKQSVGNLLYNRFFHVVQQNGRNIVRCVTSPVNQTSIAFHTKMGFSIEEGDKTIDGVYVNTDYDGPHQDRVLFEKHLM
>NZ_CP019985.1|WP_094425190.1|2005084_2006029_-|hypothetical-protein
MIHILCANPALDRTIYVQAFYPNGVTRSRASHEGLGGKGFNVALPFIVANEQKTIHMHTFFGGPVGEQLAQMMKKAQLAGETTFIEGDNRYCTILVNESKQEAALINEQGPSITEKEQQQFLQSLFRSLKAGDHLVLSGSLPKGTPLTFYRDIIAQAESRGVQTILDSSGDALAYGVEAKPWLIKINGEEFLDLMGVKEEATNRQQQIEECLKNSPYPNCIVTLGGEGTVAKINGDIWRVTLPPINVTNATASGDIFLGTFMREWRKTNDVKAALLAGSSLSLANCLHWLPTIDFSKAEQYQQKIHIERVDSAV
>NZ_CP019985.1|WP_094425192.1|2006211_2007000_+|DeoR/GlpR-transcriptional-regulator
MLPQERQDLIMKELYEYHSVKISELSSKLDVTRETIRKDLYELEEKGLIRKVHGGAVLNKANLETNYSSRKIVNEWEKRAIAKKAVEFVYDNDTIYIDYGTTALYFARELIMKKTGLTIVTNSLSLANELVEHSNFSIIIIGGNVRKNERSLYGPVANQTIANLYVDTGFFGIGALHPEVGYTNIHMGEAEVSRLMVQHSKRRVMMADYSKFGSIHMNKVAPIEEVDTLITDSKADAEMLKAIQEKARNVIVVEAEGGEGDE
>NZ_CP019985.1|WP_157730390.1|2006992_2007472_+|PTS-sugar-transporter-subunit-IIA
MSNALLDRDLILLNQTCQTVEEVLETIAAPMQAKQFAKETYADGLKEREQSFATGIPTEPFGVAIPHTDASYVLESKIGLLTLKEPVSFGVMGAENDQVDVKVVLLLGLADGSAHLKALQTIVERIQDAHFVKKLASVQEKNEALALLDASITKQLEGE
>NZ_CP019985.1|WP_094425196.1|2007474_2007750_+|PTS-galactitol-transporter-subunit-IIB
MKKVLVACGGAVATSTVAANKVKAILKENNIQADVSQCRVSELGSKSQGADLIISTAKVDRDYGVPVVHGLPFISGVGLDKTKQEILDILK
>NZ_CP019985.1|WP_094425198.1|2007775_2009122_+|PTS-galactitol-transporter-subunit-IIC
MNVLQYILDLGPAVMLPAVIFVLGLLLRQGIGKSLRSGITIGVGFVGITLVISLLTDNLGPAAQEMAERFNLGLSIVDVGWPGASPMAWASNIGTVAIPVAILVNVVMLLLKWTRVVNVDIWNIWHMAFAGAIVSTASGSFWLGVLGVVIYAAFAYKLGDWFAPIIHKYNGLEGISIPHGTGAIMAPIAVVTDAIIEKIPGLKNVNINSDKIENRLGPIGEPAIIGAILGTVIGALAGYEVSAILQLGIQMAAVMLLMPTVVKFIMEGLMPIAEAAREMLDKRFSGQDYYIGLDPALLLGNSQVVAASLIFVPLTLVIAILIPGNEVLPFGDLATIGFFISIAVGIHGGNLFRTLISGTLIMTMTIWIANMMVGVHTQLALNTGTISGGQVASLDQGGSPLQFIMTELTTWQNLIPLIVVTAIYGFCVVFTIVQHKRGKLLPAETDKN
>NZ_CP019985.1|WP_094425200.1|2009142_2010201_+|galactitol-1-phosphate-5-dehydrogenase
MKALVLEANQSFTIKDIETPVPKEDEALIKVAYCGICGSDLARYFDGKVHNYPIVLGHEFSGTVEAVGASVDSVAVGDRVVVAPLLPNKDDAFMQKGSPALSSSYSFLGSRENGAMAEYVVVKAENLLVLPETVTLEEAALIEPLTVAIHGIERIVLPAGEHVYVLGAGTIGIMTILALKARGAGKVTAIDINDEKLAFAKKIGADDAVNSLNVDPVQYASKHGKPGAVIETAGVPSAQEQAVALAEKKGKIVFVGTASGDVTFPAATFEKILREELEITGSWMSYSGPFPGYEWQAAIDYIASGKIDVKPLIHDVFKLEDGDKPFQAMKDPDNHSIKLLYQIAENEGQVGK
>NZ_CP019985.1|WP_094425202.1|2010201_2011071_+|class-II-fructose-bisphosphate-aldolase
MGLQSTTPMLKKAKANKHGIVAFNVHSFDSIFWVLEAAAELKSPVILQTTVGTVKSLGAKNIAEVAKAAAEHYQVPTGLHLDHCTDFEVIKDAIRAGYTSVMIDASMHPFAENVARTKEVVALASSLGVNVEAELGKVGGVEDDIVVDEADAQKAIPEECRQFVEETGVPTLAPAIGTAHGIYKGKPEIDFERIAKIAEMVDVPLVLHGGSAVPEDDVRRCVALGMAKVNVSTELKNAYSEAIRDHFANEPDSLDPRAYLQKAKEAAKEMAKSKIRMVGSENTVVPAFA
>NZ_CP019985.1|WP_094425204.1|2012988_2013345_+|MmcQ/YjbR-family-DNA-binding-protein
MLTREDIFKHVKEKFRTSPDYPFQKFPTYAALRHKANGKWYGLVMNVHPEKLGLDGNDEIDILNLKCHPEVSGSLRNGKSILPGYHMDKENWISIVLERVDSEEDAYHLIEQSFSLTK

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Crispr_ID: NZ_CP019985_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_7

2003427-2004258

Orphan

I-C

Consensus_repeat	Method
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCCTTGTGAGTGCGTGGATTGAAATNN	CRT

12 spacers

The CRISPR arrays of NZ_CP019985_7

>merge|NZ_CP019985|7|2003427-2004258|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTTTGTGTAAGCAATAAGCGCACGAACAACCATGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGCGAGTTCCATCGAACGCCTCAGCGAATGGTAATGTCGCACTCCTTGTGAGTGCGTGGATTGAAATACGAACGCGCTGAAAGAACAGATTATGCGGAACACGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTGAGCTTACCGGACTAGTTAACACTTGGGCGATAGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAGGATGCGGTGCTTGAAAAAGGAGATGACGCTAGAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTTATCTTCTTGACTTCGGGAGCGGGACCATATCTCGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGCCAATTGAGTCCGTCTATATAGCTGCGGACAATGACGTCGCACTCCTTGTGAGTGCGTGGATTGAAATGTTGCAAATATGAAGCTCTTTCCAACACATATCTGTCGCACTCCTTGTGAGTGCGTGGATTGAAATCAATACAAAAAGCCTGTCCAAGTAGCTAGACTGGGTCGCACTCCTTGTGAGTGCGTGGATTGAAATTCTAAAGGTGTACCACATTTACGAGAGGAGCTAGAGTCGCACTCCTTGTGAGTGCGTGGATTGAAATAAATAAATGGCCCGCACACCAAGTCAACAGCGCCGTCGCACTCCGTGAGTGCGTGGATTGAAATACATAACAGCTAGTGCAGCAAAACAGATTGTGCTGGTCGCACTCCATGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|7|7|2003427-2004060|PILER-CR
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTTGTGTAAGCAATAAGCGCACGAACAACCATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGAGTTCCATCGAACGCCTCAGCGAATGGTAAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACGAACGCGCTGAAAGAACAGATTATGCGGAACAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGAGCTTACCGGACTAGTTAACACTTGGGCGATAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAGGATGCGGTGCTTGAAAAAGGAGATGACGCTAGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTATCTTCTTGACTTCGGGAGCGGGACCATATCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCAATTGAGTCCGTCTATATAGCTGCGGACAATGAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTGCAAATATGAAGCTCTTTCCAACACATATCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CAATACAAAAAGCCTGTCCAAGTAGCTAGACTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|7|7|2003427-2004258|CRISPRCasFinder
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTTGTGTAAGCAATAAGCGCACGAACAACCATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGAGTTCCATCGAACGCCTCAGCGAATGGTAAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACGAACGCGCTGAAAGAACAGATTATGCGGAACAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGAGCTTACCGGACTAGTTAACACTTGGGCGATAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAGGATGCGGTGCTTGAAAAAGGAGATGACGCTAGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTATCTTCTTGACTTCGGGAGCGGGACCATATCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCAATTGAGTCCGTCTATATAGCTGCGGACAATGAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTGCAAATATGAAGCTCTTTCCAACACATATCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CAATACAAAAAGCCTGTCCAAGTAGCTAGACTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTAAAGGTGTACCACATTTACGAGAGGAGCTAGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAATAAATGGCCCGCACACCAAGTCAACAGCG
CCGTCGCACTCCGTGAGTGCGTGGATTGAAAT	ACATAACAGCTAGTGCAGCAAAACAGATTGTGCTG
GTCGCACTCCATGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|7|6|2003427-2004258|CRT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTTTGTGTAAGCAATAAGCGCACGAACAACCATG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCGAGTTCCATCGAACGCCTCAGCGAATGGTAAT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	ACGAACGCGCTGAAAGAACAGATTATGCGGAACAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TGAGCTTACCGGACTAGTTAACACTTGGGCGATAG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAGGATGCGGTGCTTGAAAAAGGAGATGACGCTAGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TTATCTTCTTGACTTCGGGAGCGGGACCATATCTC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GCCAATTGAGTCCGTCTATATAGCTGCGGACAATGAC
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	GTTGCAAATATGAAGCTCTTTCCAACACATATCT
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	CAATACAAAAAGCCTGTCCAAGTAGCTAGACTGG
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	TCTAAAGGTGTACCACATTTACGAGAGGAGCTAGA
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	AAATAAATGGCCCGCACACCAAGTCAACAGCGCC
GTCGCACTCCGTGAGTGCGTGGATTGAAATAC	ATAACAGCTAGTGCAGCAAAACAGATTGTGCTG
GTCGCACTCCATGTGAGTGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	unknown	unknown	gnl\|CDD\|375146
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	unknown	unknown	gnl\|CDD\|133434
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238570
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|334031
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273925
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	unknown	unknown	gnl\|CDD\|237466

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.34009e-91
NZ_CP019985.1\|WP_094425182.1\|1998178_1998646_+\|DUF5381-family-protein	gnl\|CDD\|375146	pfam17353, DUF5381, Family of unknown function (DUF5381). This is a family of unknown function found in Bacillales.	8.48841e-06
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.20879e-38
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.7095e-49
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.11588e-130
NZ_CP019985.1\|WP_094425176.1\|1994082_1995408_-\|6-phospho-alpha-glucosidase	gnl\|CDD\|133434	cd05298, GH4_GlvA_pagL_like, Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	1.56363e-66
NZ_CP019985.1\|WP_157730388.1\|1990422_1991787_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.14602e-147
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	9.912e-163
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	6.52236e-164
NZ_CP019985.1\|WP_094425170.1\|1988643_1989573_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.86719e-94
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	5.68871e-35
NZ_CP019985.1\|WP_094425184.1\|1998720_1999458_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.000400655
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	8.48856e-16
NZ_CP019985.1\|WP_094425172.1\|1989562_1990396_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.29441e-89
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.71198e-29
NZ_CP019985.1\|WP_094425178.1\|1995434_1997018_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273925	TIGR02005, PTS-IIBC-alpha, PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.80346e-18
NZ_CP019985.1\|WP_094425180.1\|1997162_1997921_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	8.07982e-36
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	gnl\|CDD\|237466	PRK13674, PRK13674, GTP cyclohydrolase I FolE2.	6.70046e-120

>NZ_CP019985.1|WP_094423738.1|2002271_2003395_+|IS3-family-transposase
MTEAKRPRRRFTAEFKKQLVQLYASGKPRAEIIREYELTPSAFDKWVRQYQTSGAFTEKENRTPEQEELIRLRKENQKLAMENDILKQAALIMGRKLDVIRQNRGIYPVAAMCAILNIPRSTFYYEAKQRDHEEEEEQLTALISDLFRQSRGIYGQRKIKKELTKQGWTVSRRRIGRIMKAQGLVSTYTVAQFKPTKFVCNESEIGNTLDRKFQQEKALTVVVSDLTYVRVGANWHYICIIIDLYNREIIGYSSGPNKNKELVGQAIAKIPYPLQKIALFHTDRGREFINQKMDQTLATFGIARSLSNKGTPYDNAVAEATFKAIKIEFVSRRVFPNQHELDLALFDYVHWFNHIRLHGSLDYQSPVDYKALHL
>NZ_CP019985.1|WP_094425186.1|1999500_2000034_+|HXXEE-domain-containing-protein
MIEALNQSVSIPSLIWLFLAFFMIHDFEEIIFVEGWAKKRYESVYQTIPSFYKPIFRIFNGITSSQFAFAVFIEFIIFIPVTYLAAEQQMFTWFLGYNVIFFLHVFTHAGQALLLKMYTPGVITAIIVTLPYSLYLFYRLAMEYNIQINDLIASIPYGLTIIPIVAFGHLLAKTVVR
>NZ_CP019985.1|WP_094425184.1|1998720_1999458_+|SMI1/KNR4-family-protein
MKASIENLLRLLGDQHEAHHGIPESEIEAKERELGFSLPLVLRNYYKALGRSPHITQGCNNQYEPLQLKKLFIPDSTFFTTDKAFLVFYQVEESVIYCGIRLDDLEREDPPVYLCAWSFADWQLENQSLSRFLAGKALIQLGVEDRLPYWAIFDESTWDLFDYRDWMRLDDREDEIEEGSELNTWKIFVKDDVLIVFELSGSEEEGEAPLAVYLASFKQTSMENLLNELEKAANLPAYRTSLFEH
>NZ_CP019985.1|WP_094425182.1|1998178_1998646_+|DUF5381-family-protein
MNAISYRKSVAWGKALGSLVFVLVCLFLLYGAFFMDTTWIRTFFCITSAIIGIPFFGGYLVVCLPRALKSNTQLLTYDQKSISDGKKTVAWVDIENISYSGPSFQKWLFPQFPQLIFHLKNRETWTVSTYYLLTDSDIQSVLKLLRGLLSRNGKK
>NZ_CP019985.1|WP_094425180.1|1997162_1997921_+|MurR/RpiR-family-transcriptional-regulator
MILDKLVNKHFESLSENDLHIIKTIYDHIDEMKTMKIQDLAAYAHTSISSIHRLTKKIGLDGYSDLKSYIKLNNFTEGTSQDLMELLDQDIHQTRKYMEQLDFCQLNQLIDRAPYIYIYGTGAAQLDLANDVQRQLWTLHKKSQVIRSERDFTNGLGEMGEDDLLFIISLSGESENLDEIIHAIKTRKIKCVSLTTLRNNLLAQNAMFNIYVNSTPFCLYNKVENSSFLPFYIVVDIIVRKFSEWKMEQVGK
>NZ_CP019985.1|WP_094425178.1|1995434_1997018_-|PTS-transporter-subunit-EIIC
MNAIKRFGSAMIVPVLLFAFFGIVVGLATLFKNPAIMGDIAAEGTMWYKVWSLIESGGWTIFNHMELAFVIGLPISLAKKAQARATLAALMVYLVFNNFINAILTLWPSTFGVDLSQGVENITGVKEIAGIPTLDTNIIGAIIISAIVIWIHNRFYDQKLPEMLGIFQGLVFVVIIGFFVMIPFAFLVAFVWPYVQQGIGSLQGFISQAGYVGVWLFHFLERVLIPTGLHHFIYTPFEFGPAAVNEGLKPYWIANLNDFATSTAALKDLYPYGFLLHGNIKMFGCFGIALAMYFSTPKENRKKVLALVLPATLTAIFAGITEPLEFTFLFIAPYLFVIHALLGATMVTLMNMFGVVGMMGGGLIEIAALNWIPLASNHGGIYIVQAMIGLIFAALYFVLFRWMIVKFDIPLPGRKKEEEARLYTKQDYQKAKKGSNSEKQAAAIYESEYEEKAVYYLEGLGGKENIKDVTNCATRLRVTVIDPSLVKDSDYFTNNKMAHGLAKSGQSVQIIVGLSVPQVRDSFEAKL
>NZ_CP019985.1|WP_094425176.1|1994082_1995408_-|6-phospho-alpha-glucosidase
MKTFNITIAGGGSTFTPGIILMLLDYLDEFPIDTIKLYDNDGDRQKTIADACAILLKERAPEIRLLASTNPEEAFTNIDFVMAHIRVGKYAMRELDEKIPLKHGVVGQETCGPGGIAYGMRSIPGVLELIDYMETYSPEAWMLNYSNPAAIVAEATRKLRPHSKVLNICDMPIGIEELIAKNLGFASRKEMEVDYYGLNHFGWWTDIRDKNGNSLMPDVVKHVSQHGYATDGTSELEQQESWNSTLKKAREVQALDPKTVPNTYLKYYLYPDYEVAHSNKEYTRANEVMEGREKFVFGECQAIIDKGTAKETKLVIDEHASYIVDLAKAIAFNTKERMLMIVENNGAIPNFDPTAMVEIPCIVGSNGPEKLVVGEIPRFQKSLMEQQVGVEKLVVEAFEEGSYQKLWQAITLSKTVPSAKVAKDILDDLIEANKAFWPALK
>NZ_CP019985.1|WP_157730388.1|1990422_1991787_+|FAD-dependent-oxidoreductase
MRQVTEIEKQIRVRAEADVVVCGGGPAGIGAALSAARNGAKTILLEAHGFLGGMGTAGMVTSFAYGYHDKERFITGGIFQEIRQKLHDRGGLIMTDRKGWEPFNAEQYKILAFELLAEAGVELLCHTTVVDTITKAGTIEAIIIESKAGREALLATHVIDATGDGDVAERAGALCKIGRDKDGGTQPSSLMYVLGNVDTEALGEKLDQEGRRGYWKTEDGYRYVNATGFADEIEQAKRDGFLTKVNRDHIAAIFTVPWVDNVVGINFGRIQGKNALDPQDLTDAEVIGREQVLDGIAFLKEYVPGFKRAELLQTAPQVGIRETRRVIGDYVITQEDIVELKQFDDCIAQSCYMIDIHSPDSSTTEIYKLPKGTHYDIPYRALLPQGLNNLLVAGRCISATHEALGSFRVQAICLAIGEAAGAAAAIATKEKCLPREIDVTHLQDTLVNQGAILS
>NZ_CP019985.1|WP_094425172.1|1989562_1990396_+|carbohydrate-ABC-transporter-permease
MKINSVSTVVRYGLLTIISAIMLLPFIWMVTTSLKDPNQIFALPPTFIPNPIQWDSYLNVLSSTHFLRQMFNSIYIGAAVTIGTVLLASLAGYAFARIPFKGRNVVFLAFLSVMMIPGEVTIIPLFLFMRELGWIDTHLPLMIIPIFGAGGAFGIFVMRQFFKQVPAELEDAARIDGCSRFRIFVQIMLPLSKPALATVTIFTFLTNWNEFLEPLIFINSRELMTLPLALSLFTDEAGTDWSSLMSASVLATLPVLTVFFFAQKQFIESLAMSGSKE
>NZ_CP019985.1|WP_094425170.1|1988643_1989573_+|sugar-ABC-transporter-permease
MNADVQAEWRQKKKRPRKPMFKRDELAGWLFISPMLLGFTIFMFIPIGFAFYMSFTDWPLLGQSEFIGTANYQAIVQDPEFQKVMKNTVLFTAGLVPFNIILALGLALLLRHPLPGMGLFRTIVFVPVVTTLVVWAIVWRYMFATDFGFINSILAWFGIEPQAYLYNKNLAMPVVILTSVLKNVGLNMVLFLAALQMVPKNLYEAARIDGAGSWRQFKNITLPIISPTVFLATIITIIGAMKIFAQIFVMTKGGPESSTKVIVYYIWEKAFRLFDMGYASAAAFILFFVIFAFTLIQWWLRKRWVYNED
>NZ_CP019985.1|WP_094425188.1|2004447_2004921_+|GNAT-family-N-acetyltransferase
MEIRTVKGSDYYVISPLINKWWGGRKMSDKLPKLFFDHFSNTSFVAERDGTLVGFLIGFFSQSHQKVAYIHFVGVHPDYRKQSVGNLLYNRFFHVVQQNGRNIVRCVTSPVNQTSIAFHTKMGFSIEEGDKTIDGVYVNTDYDGPHQDRVLFEKHLM
>NZ_CP019985.1|WP_094425190.1|2005084_2006029_-|hypothetical-protein
MIHILCANPALDRTIYVQAFYPNGVTRSRASHEGLGGKGFNVALPFIVANEQKTIHMHTFFGGPVGEQLAQMMKKAQLAGETTFIEGDNRYCTILVNESKQEAALINEQGPSITEKEQQQFLQSLFRSLKAGDHLVLSGSLPKGTPLTFYRDIIAQAESRGVQTILDSSGDALAYGVEAKPWLIKINGEEFLDLMGVKEEATNRQQQIEECLKNSPYPNCIVTLGGEGTVAKINGDIWRVTLPPINVTNATASGDIFLGTFMREWRKTNDVKAALLAGSSLSLANCLHWLPTIDFSKAEQYQQKIHIERVDSAV
>NZ_CP019985.1|WP_094425192.1|2006211_2007000_+|DeoR/GlpR-transcriptional-regulator
MLPQERQDLIMKELYEYHSVKISELSSKLDVTRETIRKDLYELEEKGLIRKVHGGAVLNKANLETNYSSRKIVNEWEKRAIAKKAVEFVYDNDTIYIDYGTTALYFARELIMKKTGLTIVTNSLSLANELVEHSNFSIIIIGGNVRKNERSLYGPVANQTIANLYVDTGFFGIGALHPEVGYTNIHMGEAEVSRLMVQHSKRRVMMADYSKFGSIHMNKVAPIEEVDTLITDSKADAEMLKAIQEKARNVIVVEAEGGEGDE
>NZ_CP019985.1|WP_157730390.1|2006992_2007472_+|PTS-sugar-transporter-subunit-IIA
MSNALLDRDLILLNQTCQTVEEVLETIAAPMQAKQFAKETYADGLKEREQSFATGIPTEPFGVAIPHTDASYVLESKIGLLTLKEPVSFGVMGAENDQVDVKVVLLLGLADGSAHLKALQTIVERIQDAHFVKKLASVQEKNEALALLDASITKQLEGE
>NZ_CP019985.1|WP_094425196.1|2007474_2007750_+|PTS-galactitol-transporter-subunit-IIB
MKKVLVACGGAVATSTVAANKVKAILKENNIQADVSQCRVSELGSKSQGADLIISTAKVDRDYGVPVVHGLPFISGVGLDKTKQEILDILK
>NZ_CP019985.1|WP_094425198.1|2007775_2009122_+|PTS-galactitol-transporter-subunit-IIC
MNVLQYILDLGPAVMLPAVIFVLGLLLRQGIGKSLRSGITIGVGFVGITLVISLLTDNLGPAAQEMAERFNLGLSIVDVGWPGASPMAWASNIGTVAIPVAILVNVVMLLLKWTRVVNVDIWNIWHMAFAGAIVSTASGSFWLGVLGVVIYAAFAYKLGDWFAPIIHKYNGLEGISIPHGTGAIMAPIAVVTDAIIEKIPGLKNVNINSDKIENRLGPIGEPAIIGAILGTVIGALAGYEVSAILQLGIQMAAVMLLMPTVVKFIMEGLMPIAEAAREMLDKRFSGQDYYIGLDPALLLGNSQVVAASLIFVPLTLVIAILIPGNEVLPFGDLATIGFFISIAVGIHGGNLFRTLISGTLIMTMTIWIANMMVGVHTQLALNTGTISGGQVASLDQGGSPLQFIMTELTTWQNLIPLIVVTAIYGFCVVFTIVQHKRGKLLPAETDKN
>NZ_CP019985.1|WP_094425200.1|2009142_2010201_+|galactitol-1-phosphate-5-dehydrogenase
MKALVLEANQSFTIKDIETPVPKEDEALIKVAYCGICGSDLARYFDGKVHNYPIVLGHEFSGTVEAVGASVDSVAVGDRVVVAPLLPNKDDAFMQKGSPALSSSYSFLGSRENGAMAEYVVVKAENLLVLPETVTLEEAALIEPLTVAIHGIERIVLPAGEHVYVLGAGTIGIMTILALKARGAGKVTAIDINDEKLAFAKKIGADDAVNSLNVDPVQYASKHGKPGAVIETAGVPSAQEQAVALAEKKGKIVFVGTASGDVTFPAATFEKILREELEITGSWMSYSGPFPGYEWQAAIDYIASGKIDVKPLIHDVFKLEDGDKPFQAMKDPDNHSIKLLYQIAENEGQVGK
>NZ_CP019985.1|WP_094425202.1|2010201_2011071_+|class-II-fructose-bisphosphate-aldolase
MGLQSTTPMLKKAKANKHGIVAFNVHSFDSIFWVLEAAAELKSPVILQTTVGTVKSLGAKNIAEVAKAAAEHYQVPTGLHLDHCTDFEVIKDAIRAGYTSVMIDASMHPFAENVARTKEVVALASSLGVNVEAELGKVGGVEDDIVVDEADAQKAIPEECRQFVEETGVPTLAPAIGTAHGIYKGKPEIDFERIAKIAEMVDVPLVLHGGSAVPEDDVRRCVALGMAKVNVSTELKNAYSEAIRDHFANEPDSLDPRAYLQKAKEAAKEMAKSKIRMVGSENTVVPAFA
>NZ_CP019985.1|WP_094425204.1|2012988_2013345_+|MmcQ/YjbR-family-DNA-binding-protein
MLTREDIFKHVKEKFRTSPDYPFQKFPTYAALRHKANGKWYGLVMNVHPEKLGLDGNDEIDILNLKCHPEVSGSLRNGKSILPGYHMDKENWISIVLERVDSEEDAYHLIEQSFSLTK
>NZ_CP019985.1|WP_094425206.1|2013455_2014364_-|GTP-cyclohydrolase-I-FolE2
MKNNLRNLNLPDKKERHRRFGSVPPTIGVKPCNKDEMIDLQNTPDDFLFDLQSVGICNVQHPITLQSSHSPKIQNTIGTFKMTTSLDSNAKGINMSRLTEQLDHYYQEGWTVDFQNLYTFTKELTERMDQLTAEVEVSFPWFFERNAPKSDKTGLMKAVGSIKVRYDNKNGFSHEAQLSVGVTTLCPCSKEISEYSAHNQRGFVTMAIELYDPLHCEKDWKATLLHAAESNASAMIHPVLKRPDEKFVTEKAYENPRFVEDMVRLIAADLYEMDFVKRFTVECRNEESIHLHDAIAKVSYQK

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Crispr_ID: NZ_CP019985_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_8

2011506-2012788

Orphan

I-C

Consensus_repeat	Method
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCTGTGTGAGTGCGTGGATTGAAATN	CRT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder

19 spacers

The CRISPR arrays of NZ_CP019985_8

>merge|NZ_CP019985|8|2011506-2012788|PILER-CR,CRISPRCasFinder,CRT,CRISPRCasFinder
GTCGCACTCTGTGTGAGTGCGTGGATTGAAATCCACAAGGTCGAGACATTCGAACGGAACGATTCGGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGTATCTCGGCAAATAAGTCGCCCGCCGCCGCACGTCGCACTCTGTGTGAGTGCGTGGATTGAAATAGGTTGTGTCGGAAATGTGTGGAAGAACTTAACGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGCGCCTCGTCCTCGGAATAAACGGGACGCTTGTGTCGCACTCTGTGTGAGTGCGTGGATTGAAATCCTACCAAAGCCAAAGGGCCAAACTAGTGATAAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGACCAAGTATCCGTTGAGGTGTTATCTACCATCACGTCGCACTCTGTGTGAGTGCGTGGATTGAAATATGTCAATTCCCGGACAAGCAGTGCTCGCGCCCGTCGCACTCTGTGTGAGTGCGTGGATTGAAATTAATTGATCTGCCGGACATACTCGCGCTAAAACGTAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGACGTTACCGTCCGCGCGACGTTTAACACGAAAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATTAACCGCGGGCATGGAGATCGTGCACACGCTCAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATAACGGTAAAGTGGACGAATCGGATGCGGTGAGACAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATATTGTTATTTATCGGGATCGCCTTTTTAGATATGCGTCGCACTCTGTGTGAGTGCGTGGATTGAAATCAGAAAGTCAAAAATTACGAAAACCGAACACTCTAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGTAAGTCTTGCCCGTCTCACGCGCCAGCTCCATGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGGCATGCCTACGTCTCCTTGTACAGTATCAAGCAGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGAGGAAATCAATAACGCTCCACAAACGTTTTCTGTCGCACTCTGTGTGAGTGCGTGGATTGAAATGCTCACTCCTCCGTGTCTCCATTTCGGTCGCTACGTCGCACTCTGTGTAGTGCGTGGATTGAAATTGCTGCAAAATCGTTCTATCACCTGATGCCTGATTGTCGCACTCTGTGTGAGTGCGTGGATTGAAATCAGTAAGGAGGAGTAGTGTCATGAAACATGATTTGTCGCACTCTTCATGACTGCATGGATTGCACC

>NZ_CP019985|8|8|2011506-2012722|PILER-CR
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCACAAGGTCGAGACATTCGAACGGAACGATTCG
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTATCTCGGCAAATAAGTCGCCCGCCGCCGCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AGGTTGTGTCGGAAATGTGTGGAAGAACTTAAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GCGCCTCGTCCTCGGAATAAACGGGACGCTTGT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCTACCAAAGCCAAAGGGCCAAACTAGTGATAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACCAAGTATCCGTTGAGGTGTTATCTACCATCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATGTCAATTCCCGGACAAGCAGTGCTCGCGCCC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAATTGATCTGCCGGACATACTCGCGCTAAAACGTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACGTTACCGTCCGCGCGACGTTTAACACGAAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAACCGCGGGCATGGAGATCGTGCACACGCTCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AACGGTAAAGTGGACGAATCGGATGCGGTGAGACA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATTGTTATTTATCGGGATCGCCTTTTTAGATATGC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGAAAGTCAAAAATTACGAAAACCGAACACTCTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTAAGTCTTGCCCGTCTCACGCGCCAGCTCCAT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GGCATGCCTACGTCTCCTTGTACAGTATCAAGCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GAGGAAATCAATAACGCTCCACAAACGTTTTCT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GCTCACTCCTCCGTGTCTCCATTTCGGTCGCTAC
GTCGCACTCTGTGTAGTGCGTGGATTGAAATT	GCTGCAAAATCGTTCTATCACCTGATGCCTGATTG
TCGCACTCTGTGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|8|8|2011506-2012591|CRISPRCasFinder
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCACAAGGTCGAGACATTCGAACGGAACGATTCG
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTATCTCGGCAAATAAGTCGCCCGCCGCCGCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AGGTTGTGTCGGAAATGTGTGGAAGAACTTAAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GCGCCTCGTCCTCGGAATAAACGGGACGCTTGT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCTACCAAAGCCAAAGGGCCAAACTAGTGATAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACCAAGTATCCGTTGAGGTGTTATCTACCATCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATGTCAATTCCCGGACAAGCAGTGCTCGCGCCC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAATTGATCTGCCGGACATACTCGCGCTAAAACGTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACGTTACCGTCCGCGCGACGTTTAACACGAAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAACCGCGGGCATGGAGATCGTGCACACGCTCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AACGGTAAAGTGGACGAATCGGATGCGGTGAGACA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATTGTTATTTATCGGGATCGCCTTTTTAGATATGC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGAAAGTCAAAAATTACGAAAACCGAACACTCTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTAAGTCTTGCCCGTCTCACGCGCCAGCTCCAT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GGCATGCCTACGTCTCCTTGTACAGTATCAAGCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GAGGAAATCAATAACGCTCCACAAACGTTTTCT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAATGCTCACTCCTCCGTGTCTCCATTTCGGTCGCTACGTCGCACTCTGTGTAGTGCGTGGATTGAAATTGCTGCAAAATCGTTCTATCACCTGATGCCTGATTGTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGTAAGGAGGAGTAGTGTCATGAAACATGATTT


>NZ_CP019985|8|7|2011506-2012788|CRT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCACAAGGTCGAGACATTCGAACGGAACGATTCG
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTATCTCGGCAAATAAGTCGCCCGCCGCCGCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AGGTTGTGTCGGAAATGTGTGGAAGAACTTAAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GCGCCTCGTCCTCGGAATAAACGGGACGCTTGT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCTACCAAAGCCAAAGGGCCAAACTAGTGATAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACCAAGTATCCGTTGAGGTGTTATCTACCATCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATGTCAATTCCCGGACAAGCAGTGCTCGCGCCC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAATTGATCTGCCGGACATACTCGCGCTAAAACGTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACGTTACCGTCCGCGCGACGTTTAACACGAAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAACCGCGGGCATGGAGATCGTGCACACGCTCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AACGGTAAAGTGGACGAATCGGATGCGGTGAGACA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATTGTTATTTATCGGGATCGCCTTTTTAGATATGC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGAAAGTCAAAAATTACGAAAACCGAACACTCTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTAAGTCTTGCCCGTCTCACGCGCCAGCTCCAT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GGCATGCCTACGTCTCCTTGTACAGTATCAAGCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GAGGAAATCAATAACGCTCCACAAACGTTTTCT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GCTCACTCCTCCGTGTCTCCATTTCGGTCGCTAC
GTCGCACTCTGTGTAGTGCGTGGATTGAAATT	GCTGCAAAATCGTTCTATCACCTGATGCCTGATT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGTAAGGAGGAGTAGTGTCATGAAACATGATTT
GTCGCACTCTTCATGACTGCATGGATTGCACC

>NZ_CP019985|8|9|2012691-2012788|CRISPRCasFinder
	CCACAAGGTCGAGACATTCGAACGGAACGATTCG
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTATCTCGGCAAATAAGTCGCCCGCCGCCGCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AGGTTGTGTCGGAAATGTGTGGAAGAACTTAAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GCGCCTCGTCCTCGGAATAAACGGGACGCTTGT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CCTACCAAAGCCAAAGGGCCAAACTAGTGATAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACCAAGTATCCGTTGAGGTGTTATCTACCATCAC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATGTCAATTCCCGGACAAGCAGTGCTCGCGCCC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAATTGATCTGCCGGACATACTCGCGCTAAAACGTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GACGTTACCGTCCGCGCGACGTTTAACACGAAA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	TAACCGCGGGCATGGAGATCGTGCACACGCTCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	AACGGTAAAGTGGACGAATCGGATGCGGTGAGACA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	ATTGTTATTTATCGGGATCGCCTTTTTAGATATGC
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGAAAGTCAAAAATTACGAAAACCGAACACTCTA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GTAAGTCTTGCCCGTCTCACGCGCCAGCTCCAT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GGCATGCCTACGTCTCCTTGTACAGTATCAAGCA
GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	GAGGAAATCAATAACGCTCCACAAACGTTTTCT
GTCGCACTCTGTGTGAGTGCGTGGATTGAAATGCTCACTCCTCCGTGTCTCCATTTCGGTCGCTACGTCGCACTCTGTGTAGTGCGTGGATTGAAATTGCTGCAAAATCGTTCTATCACCTGATGCCTGATTGTCGCACTCTGTGTGAGTGCGTGGATTGAAAT	CAGTAAGGAGGAGTAGTGTCATGAAACATGATTT
GTCGCACTCTTCATGACTGCATGGATTGCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP019985.1\|WP_169715931.1\|2020671_2020821_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238570
NZ_CP019985.1\|WP_094425210.1\|2015181_2015406_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
NZ_CP019985.1\|WP_094425214.1\|2017405_2017639_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425219.1\|2020872_2021580_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|334031
NZ_CP019985.1\|WP_094429217.1\|2015450_2016254_+\|DUF817-domain-containing-protein	unknown	unknown	gnl\|CDD\|377545
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	unknown	unknown	gnl\|CDD\|237466
NZ_CP019985.1\|WP_094425208.1\|2014694_2015171_+\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP019985.1\|WP_094425215.1\|2017745_2017982_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP019985.1\|WP_094425217.1\|2018186_2019143_-\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425192.1\|2006211_2007000_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.34009e-91
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.20879e-38
NZ_CP019985.1\|WP_094423738.1\|2002271_2003395_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.7095e-49
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	6.52236e-164
NZ_CP019985.1\|WP_094425190.1\|2005084_2006029_-\|hypothetical-protein	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	1.56363e-66
NZ_CP019985.1\|WP_094425210.1\|2015181_2015406_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	1.13581e-29
NZ_CP019985.1\|WP_094425219.1\|2020872_2021580_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.45925e-49
NZ_CP019985.1\|WP_094425188.1\|2004447_2004921_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.80346e-18
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.11588e-130
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	5.68871e-35
NZ_CP019985.1\|WP_094429217.1\|2015450_2016254_+\|DUF817-domain-containing-protein	gnl\|CDD\|377545	pfam05675, DUF817, Protein of unknown function (DUF817). This family consists of several bacterial proteins of unknown function.	2.14243e-131
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	gnl\|CDD\|237466	PRK13674, PRK13674, GTP cyclohydrolase I FolE2.	6.70046e-120
NZ_CP019985.1\|WP_094425208.1\|2014694_2015171_+\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	5.70761e-34
NZ_CP019985.1\|WP_094425186.1\|1999500_2000034_+\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	8.48856e-16
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.71198e-29
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	9.912e-163
NZ_CP019985.1\|WP_094425217.1\|2018186_2019143_-\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	2.63954e-50

>NZ_CP019985.1|WP_094425202.1|2010201_2011071_+|class-II-fructose-bisphosphate-aldolase
MGLQSTTPMLKKAKANKHGIVAFNVHSFDSIFWVLEAAAELKSPVILQTTVGTVKSLGAKNIAEVAKAAAEHYQVPTGLHLDHCTDFEVIKDAIRAGYTSVMIDASMHPFAENVARTKEVVALASSLGVNVEAELGKVGGVEDDIVVDEADAQKAIPEECRQFVEETGVPTLAPAIGTAHGIYKGKPEIDFERIAKIAEMVDVPLVLHGGSAVPEDDVRRCVALGMAKVNVSTELKNAYSEAIRDHFANEPDSLDPRAYLQKAKEAAKEMAKSKIRMVGSENTVVPAFA
>NZ_CP019985.1|WP_094425200.1|2009142_2010201_+|galactitol-1-phosphate-5-dehydrogenase
MKALVLEANQSFTIKDIETPVPKEDEALIKVAYCGICGSDLARYFDGKVHNYPIVLGHEFSGTVEAVGASVDSVAVGDRVVVAPLLPNKDDAFMQKGSPALSSSYSFLGSRENGAMAEYVVVKAENLLVLPETVTLEEAALIEPLTVAIHGIERIVLPAGEHVYVLGAGTIGIMTILALKARGAGKVTAIDINDEKLAFAKKIGADDAVNSLNVDPVQYASKHGKPGAVIETAGVPSAQEQAVALAEKKGKIVFVGTASGDVTFPAATFEKILREELEITGSWMSYSGPFPGYEWQAAIDYIASGKIDVKPLIHDVFKLEDGDKPFQAMKDPDNHSIKLLYQIAENEGQVGK
>NZ_CP019985.1|WP_094425198.1|2007775_2009122_+|PTS-galactitol-transporter-subunit-IIC
MNVLQYILDLGPAVMLPAVIFVLGLLLRQGIGKSLRSGITIGVGFVGITLVISLLTDNLGPAAQEMAERFNLGLSIVDVGWPGASPMAWASNIGTVAIPVAILVNVVMLLLKWTRVVNVDIWNIWHMAFAGAIVSTASGSFWLGVLGVVIYAAFAYKLGDWFAPIIHKYNGLEGISIPHGTGAIMAPIAVVTDAIIEKIPGLKNVNINSDKIENRLGPIGEPAIIGAILGTVIGALAGYEVSAILQLGIQMAAVMLLMPTVVKFIMEGLMPIAEAAREMLDKRFSGQDYYIGLDPALLLGNSQVVAASLIFVPLTLVIAILIPGNEVLPFGDLATIGFFISIAVGIHGGNLFRTLISGTLIMTMTIWIANMMVGVHTQLALNTGTISGGQVASLDQGGSPLQFIMTELTTWQNLIPLIVVTAIYGFCVVFTIVQHKRGKLLPAETDKN
>NZ_CP019985.1|WP_094425196.1|2007474_2007750_+|PTS-galactitol-transporter-subunit-IIB
MKKVLVACGGAVATSTVAANKVKAILKENNIQADVSQCRVSELGSKSQGADLIISTAKVDRDYGVPVVHGLPFISGVGLDKTKQEILDILK
>NZ_CP019985.1|WP_157730390.1|2006992_2007472_+|PTS-sugar-transporter-subunit-IIA
MSNALLDRDLILLNQTCQTVEEVLETIAAPMQAKQFAKETYADGLKEREQSFATGIPTEPFGVAIPHTDASYVLESKIGLLTLKEPVSFGVMGAENDQVDVKVVLLLGLADGSAHLKALQTIVERIQDAHFVKKLASVQEKNEALALLDASITKQLEGE
>NZ_CP019985.1|WP_094425192.1|2006211_2007000_+|DeoR/GlpR-transcriptional-regulator
MLPQERQDLIMKELYEYHSVKISELSSKLDVTRETIRKDLYELEEKGLIRKVHGGAVLNKANLETNYSSRKIVNEWEKRAIAKKAVEFVYDNDTIYIDYGTTALYFARELIMKKTGLTIVTNSLSLANELVEHSNFSIIIIGGNVRKNERSLYGPVANQTIANLYVDTGFFGIGALHPEVGYTNIHMGEAEVSRLMVQHSKRRVMMADYSKFGSIHMNKVAPIEEVDTLITDSKADAEMLKAIQEKARNVIVVEAEGGEGDE
>NZ_CP019985.1|WP_094425190.1|2005084_2006029_-|hypothetical-protein
MIHILCANPALDRTIYVQAFYPNGVTRSRASHEGLGGKGFNVALPFIVANEQKTIHMHTFFGGPVGEQLAQMMKKAQLAGETTFIEGDNRYCTILVNESKQEAALINEQGPSITEKEQQQFLQSLFRSLKAGDHLVLSGSLPKGTPLTFYRDIIAQAESRGVQTILDSSGDALAYGVEAKPWLIKINGEEFLDLMGVKEEATNRQQQIEECLKNSPYPNCIVTLGGEGTVAKINGDIWRVTLPPINVTNATASGDIFLGTFMREWRKTNDVKAALLAGSSLSLANCLHWLPTIDFSKAEQYQQKIHIERVDSAV
>NZ_CP019985.1|WP_094425188.1|2004447_2004921_+|GNAT-family-N-acetyltransferase
MEIRTVKGSDYYVISPLINKWWGGRKMSDKLPKLFFDHFSNTSFVAERDGTLVGFLIGFFSQSHQKVAYIHFVGVHPDYRKQSVGNLLYNRFFHVVQQNGRNIVRCVTSPVNQTSIAFHTKMGFSIEEGDKTIDGVYVNTDYDGPHQDRVLFEKHLM
>NZ_CP019985.1|WP_094423738.1|2002271_2003395_+|IS3-family-transposase
MTEAKRPRRRFTAEFKKQLVQLYASGKPRAEIIREYELTPSAFDKWVRQYQTSGAFTEKENRTPEQEELIRLRKENQKLAMENDILKQAALIMGRKLDVIRQNRGIYPVAAMCAILNIPRSTFYYEAKQRDHEEEEEQLTALISDLFRQSRGIYGQRKIKKELTKQGWTVSRRRIGRIMKAQGLVSTYTVAQFKPTKFVCNESEIGNTLDRKFQQEKALTVVVSDLTYVRVGANWHYICIIIDLYNREIIGYSSGPNKNKELVGQAIAKIPYPLQKIALFHTDRGREFINQKMDQTLATFGIARSLSNKGTPYDNAVAEATFKAIKIEFVSRRVFPNQHELDLALFDYVHWFNHIRLHGSLDYQSPVDYKALHL
>NZ_CP019985.1|WP_094425186.1|1999500_2000034_+|HXXEE-domain-containing-protein
MIEALNQSVSIPSLIWLFLAFFMIHDFEEIIFVEGWAKKRYESVYQTIPSFYKPIFRIFNGITSSQFAFAVFIEFIIFIPVTYLAAEQQMFTWFLGYNVIFFLHVFTHAGQALLLKMYTPGVITAIIVTLPYSLYLFYRLAMEYNIQINDLIASIPYGLTIIPIVAFGHLLAKTVVR
>NZ_CP019985.1|WP_094425204.1|2012988_2013345_+|MmcQ/YjbR-family-DNA-binding-protein
MLTREDIFKHVKEKFRTSPDYPFQKFPTYAALRHKANGKWYGLVMNVHPEKLGLDGNDEIDILNLKCHPEVSGSLRNGKSILPGYHMDKENWISIVLERVDSEEDAYHLIEQSFSLTK
>NZ_CP019985.1|WP_094425206.1|2013455_2014364_-|GTP-cyclohydrolase-I-FolE2
MKNNLRNLNLPDKKERHRRFGSVPPTIGVKPCNKDEMIDLQNTPDDFLFDLQSVGICNVQHPITLQSSHSPKIQNTIGTFKMTTSLDSNAKGINMSRLTEQLDHYYQEGWTVDFQNLYTFTKELTERMDQLTAEVEVSFPWFFERNAPKSDKTGLMKAVGSIKVRYDNKNGFSHEAQLSVGVTTLCPCSKEISEYSAHNQRGFVTMAIELYDPLHCEKDWKATLLHAAESNASAMIHPVLKRPDEKFVTEKAYENPRFVEDMVRLIAADLYEMDFVKRFTVECRNEESIHLHDAIAKVSYQK
>NZ_CP019985.1|WP_094425208.1|2014694_2015171_+|DUF2975-domain-containing-protein
MKRGSTLFLKLAVMLMGSPVLALCIFGLVWLPSHPVDPHYDHILYPIFIGVFLTVIPFFVALSQAFKLLSYIDKNQSFSELSTRALKNIKYCAVIISGLYVAIMPFFYLLADRDDAPGLLFMGVVPLFASTVIAVFAAVLQRLFQEAIDIKSENDLTV
>NZ_CP019985.1|WP_094425210.1|2015181_2015406_+|helix-turn-helix-transcriptional-regulator
MAIIINVDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRLSTLDAICKALDCQPGDLLEYRSDANLHDE
>NZ_CP019985.1|WP_094429217.1|2015450_2016254_+|DUF817-domain-containing-protein
MRPLKQLVRFGWEQALSCLFPVVIFASLAITQLVPLPFLPRYDWLLIICLFMQWWMVRSGLETWDELKVITLFHLIGLALELFKVHMGSWSYPEEGYSKVFGVPLYSGFMYASVASYLCQAWRRLKIELVKWPPLLLVVPLAAAIYLNFFTHHFWIDIRFWLAGLVIIVFWPSWVTYEVNGTRYRMPLALSFVLIGFFIWIAENIATFFGAWEYPNQTEAWSLVHLGKVSSWLLLVIVSFLIVATLKQVKGKRSTGVDASQSFIKKQ
>NZ_CP019985.1|WP_094425214.1|2017405_2017639_-|hypothetical-protein
MKAKFIFENGVYVEESPRDGTPVHVLAYLYNLIYQIETNAMVYIEDKNDQDTFAEENLHNVKSIIFEFEEQDRFTKD
>NZ_CP019985.1|WP_094425215.1|2017745_2017982_+|hypothetical-protein
MQGERFTIKGTVPENTSAYICLPAVANREELKALQLDPANVAPEEAETVFRHMRPDSVLTKQGSGPFSYTYQARMAKQ
>NZ_CP019985.1|WP_094425217.1|2018186_2019143_-|di-trans,poly-cis-decaprenylcistransferase
MGLILAVKTLSRRVPENRFYFFQGHSCRAYVKRFYVFLVATIEKQICFLNRSVYRLTSGKIKLYDERIVNVPRERIIINFINHIAIIPDGNRRWAKKKGLLSEGSLYDKGAANFQYITEALFSKGVNYVTFWVSSVDNLKNREKSLVKAMHKLYAKKFTELLNDSKIMENKIKVQVCGSWRTFLEKDTIDMIEQLLVKTANNDKGILTLLVAYDGKIERGQAVISLLDDHVLEKNINKDPLTFNSLLKKHSWTGYLPSVDFIIRTGSWNDPHNSADFLSFLTGDSQLYFPEVYWPDFDSNWLEKSLQEYTSRERRKGS
>NZ_CP019985.1|WP_169715931.1|2020671_2020821_+|hypothetical-protein
MAVSAVILLNADKEYVPGGTQLKKNERDSIDYWTKDNMKKAVPGAGMDE
>NZ_CP019985.1|WP_094425219.1|2020872_2021580_-|GntR-family-transcriptional-regulator
MKKRQFVADDLLSKIYQNKYAPGEKLPTERALATHYQVSRYTIRKAIKKLINIGSVQVVQGSGIFVTKTIRESPLIYNSLTEKKFKDIQSTIIAMQKKNMTPEIEKIFDRKNDFVWEFTRVRIVDYQKVQIETTQLPYSYFPNLTEEIAAGSVHEYVQQCGYDISHFITTYSAVNVTREQANLLNCKKGIAAMKIVNRGILNDGRVFEYSELINLDYAVSYFTPFNRFKHQFRKK

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Crispr_ID: NZ_CP019985_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_9

2016612-2017042

Orphan

I-C

Consensus_repeat	Method
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CRT

6 spacers

The CRISPR arrays of NZ_CP019985_9

>merge|NZ_CP019985|9|2016612-2017042|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAATTCGCGTAATAAATCGTCTTAATCCCCTTATGATGTCGCACTCTTAGTGAGTGCGTGGATTGAAATATCCATACATTTCGGTCGTTCCGACACAGGCTGCGGTCGCACTCTTAGTGAGTGCGTGGATTGAAATCGCTCAGGATGTCCCCAACCCCTACTGTTTTAAGGTCGCACTCTTAGTGAGTGCGTGGATTGAAATATACAAGGATTTAAGGAAATAGATAAACACTATTGCGTCGCACTCTTAGTGAGTGCGTGGATTGAAATCCTGACTTTTTAATCATGCCATATCCGGTAAAAAGTCGCACTCTTAGTGAGTGCGTGGATTGAAATTCAACGTAGTCATGGAACTCTGCAAACGTCGTAGCGTCGCACTCCTTGTGAGTGTGTGAATTAACCA

>NZ_CP019985|9|9|2016612-2016975|PILER-CR
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TCGCGTAATAAATCGTCTTAATCCCCTTATGAT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	ATCCATACATTTCGGTCGTTCCGACACAGGCTGCG
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CGCTCAGGATGTCCCCAACCCCTACTGTTTTAAG
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	ATACAAGGATTTAAGGAAATAGATAAACACTATTGC
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CCTGACTTTTTAATCATGCCATATCCGGTAAAAA
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT

>NZ_CP019985|9|10|2016612-2017042|CRISPRCasFinder
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TCGCGTAATAAATCGTCTTAATCCCCTTATGAT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	ATCCATACATTTCGGTCGTTCCGACACAGGCTGCG
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CGCTCAGGATGTCCCCAACCCCTACTGTTTTAAG
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	ATACAAGGATTTAAGGAAATAGATAAACACTATTGC
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CCTGACTTTTTAATCATGCCATATCCGGTAAAAA
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TCAACGTAGTCATGGAACTCTGCAAACGTCGTAGC
GTCGCACTCCTTGTGAGTGTGTGAATTAACCA

>NZ_CP019985|9|8|2016612-2017042|CRT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TCGCGTAATAAATCGTCTTAATCCCCTTATGAT
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	ATCCATACATTTCGGTCGTTCCGACACAGGCTGCG
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CGCTCAGGATGTCCCCAACCCCTACTGTTTTAAG
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	ATACAAGGATTTAAGGAAATAGATAAACACTATTGC
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	CCTGACTTTTTAATCATGCCATATCCGGTAAAAA
GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT	TCAACGTAGTCATGGAACTCTGCAAACGTCGTAGC
GTCGCACTCCTTGTGAGTGTGTGAATTAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_CP019985.1\|WP_169715931.1\|2020671_2020821_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP019985.1\|WP_094425224.1\|2024982_2025480_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|334031
NZ_CP019985.1\|WP_094425219.1\|2020872_2021580_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP019985.1\|WP_094425227.1\|2025645_2028609_-\|response-regulator	unknown	unknown	gnl\|CDD\|225519
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP019985.1\|WP_094425214.1\|2017405_2017639_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094429217.1\|2015450_2016254_+\|DUF817-domain-containing-protein	unknown	unknown	gnl\|CDD\|377545
NZ_CP019985.1\|WP_094425221.1\|2021661_2022861_-\|starvation-sensing-protein-RspA	unknown	unknown	gnl\|CDD\|239438
NZ_CP019985.1\|WP_094425229.1\|2028693_2029812_-\|response-regulator	unknown	unknown	gnl\|CDD\|226456
NZ_CP019985.1\|WP_094425210.1\|2015181_2015406_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
NZ_CP019985.1\|WP_094425208.1\|2014694_2015171_+\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	unknown	unknown	gnl\|CDD\|237466
NZ_CP019985.1\|WP_094425215.1\|2017745_2017982_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP019985.1\|WP_094425222.1\|2023156_2024521_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_CP019985.1\|WP_094425217.1\|2018186_2019143_-\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425196.1\|2007474_2007750_+\|PTS-galactitol-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.20879e-38
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	9.912e-163
NZ_CP019985.1\|WP_094425219.1\|2020872_2021580_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.45925e-49
NZ_CP019985.1\|WP_094425198.1\|2007775_2009122_+\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	6.52236e-164
NZ_CP019985.1\|WP_094425227.1\|2025645_2028609_-\|response-regulator	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	7.94725e-49
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.11588e-130
NZ_CP019985.1\|WP_157730390.1\|2006992_2007472_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	5.68871e-35
NZ_CP019985.1\|WP_094429217.1\|2015450_2016254_+\|DUF817-domain-containing-protein	gnl\|CDD\|377545	pfam05675, DUF817, Protein of unknown function (DUF817). This family consists of several bacterial proteins of unknown function.	2.14243e-131
NZ_CP019985.1\|WP_094425221.1\|2021661_2022861_-\|starvation-sensing-protein-RspA	gnl\|CDD\|239438	cd03322, RspA, The starvation sensing protein RspA from E.coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad.	0
NZ_CP019985.1\|WP_094425229.1\|2028693_2029812_-\|response-regulator	gnl\|CDD\|226456	COG3947, COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms].	3.1027e-82
NZ_CP019985.1\|WP_094425210.1\|2015181_2015406_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	1.13581e-29
NZ_CP019985.1\|WP_094425208.1\|2014694_2015171_+\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	5.70761e-34
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	gnl\|CDD\|237466	PRK13674, PRK13674, GTP cyclohydrolase I FolE2.	6.70046e-120
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.71198e-29
NZ_CP019985.1\|WP_094425222.1\|2023156_2024521_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	1.65923e-135
NZ_CP019985.1\|WP_094425217.1\|2018186_2019143_-\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	2.63954e-50

>NZ_CP019985.1|WP_094429217.1|2015450_2016254_+|DUF817-domain-containing-protein
MRPLKQLVRFGWEQALSCLFPVVIFASLAITQLVPLPFLPRYDWLLIICLFMQWWMVRSGLETWDELKVITLFHLIGLALELFKVHMGSWSYPEEGYSKVFGVPLYSGFMYASVASYLCQAWRRLKIELVKWPPLLLVVPLAAAIYLNFFTHHFWIDIRFWLAGLVIIVFWPSWVTYEVNGTRYRMPLALSFVLIGFFIWIAENIATFFGAWEYPNQTEAWSLVHLGKVSSWLLLVIVSFLIVATLKQVKGKRSTGVDASQSFIKKQ
>NZ_CP019985.1|WP_094425210.1|2015181_2015406_+|helix-turn-helix-transcriptional-regulator
MAIIINVDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRLSTLDAICKALDCQPGDLLEYRSDANLHDE
>NZ_CP019985.1|WP_094425208.1|2014694_2015171_+|DUF2975-domain-containing-protein
MKRGSTLFLKLAVMLMGSPVLALCIFGLVWLPSHPVDPHYDHILYPIFIGVFLTVIPFFVALSQAFKLLSYIDKNQSFSELSTRALKNIKYCAVIISGLYVAIMPFFYLLADRDDAPGLLFMGVVPLFASTVIAVFAAVLQRLFQEAIDIKSENDLTV
>NZ_CP019985.1|WP_094425206.1|2013455_2014364_-|GTP-cyclohydrolase-I-FolE2
MKNNLRNLNLPDKKERHRRFGSVPPTIGVKPCNKDEMIDLQNTPDDFLFDLQSVGICNVQHPITLQSSHSPKIQNTIGTFKMTTSLDSNAKGINMSRLTEQLDHYYQEGWTVDFQNLYTFTKELTERMDQLTAEVEVSFPWFFERNAPKSDKTGLMKAVGSIKVRYDNKNGFSHEAQLSVGVTTLCPCSKEISEYSAHNQRGFVTMAIELYDPLHCEKDWKATLLHAAESNASAMIHPVLKRPDEKFVTEKAYENPRFVEDMVRLIAADLYEMDFVKRFTVECRNEESIHLHDAIAKVSYQK
>NZ_CP019985.1|WP_094425204.1|2012988_2013345_+|MmcQ/YjbR-family-DNA-binding-protein
MLTREDIFKHVKEKFRTSPDYPFQKFPTYAALRHKANGKWYGLVMNVHPEKLGLDGNDEIDILNLKCHPEVSGSLRNGKSILPGYHMDKENWISIVLERVDSEEDAYHLIEQSFSLTK
>NZ_CP019985.1|WP_094425202.1|2010201_2011071_+|class-II-fructose-bisphosphate-aldolase
MGLQSTTPMLKKAKANKHGIVAFNVHSFDSIFWVLEAAAELKSPVILQTTVGTVKSLGAKNIAEVAKAAAEHYQVPTGLHLDHCTDFEVIKDAIRAGYTSVMIDASMHPFAENVARTKEVVALASSLGVNVEAELGKVGGVEDDIVVDEADAQKAIPEECRQFVEETGVPTLAPAIGTAHGIYKGKPEIDFERIAKIAEMVDVPLVLHGGSAVPEDDVRRCVALGMAKVNVSTELKNAYSEAIRDHFANEPDSLDPRAYLQKAKEAAKEMAKSKIRMVGSENTVVPAFA
>NZ_CP019985.1|WP_094425200.1|2009142_2010201_+|galactitol-1-phosphate-5-dehydrogenase
MKALVLEANQSFTIKDIETPVPKEDEALIKVAYCGICGSDLARYFDGKVHNYPIVLGHEFSGTVEAVGASVDSVAVGDRVVVAPLLPNKDDAFMQKGSPALSSSYSFLGSRENGAMAEYVVVKAENLLVLPETVTLEEAALIEPLTVAIHGIERIVLPAGEHVYVLGAGTIGIMTILALKARGAGKVTAIDINDEKLAFAKKIGADDAVNSLNVDPVQYASKHGKPGAVIETAGVPSAQEQAVALAEKKGKIVFVGTASGDVTFPAATFEKILREELEITGSWMSYSGPFPGYEWQAAIDYIASGKIDVKPLIHDVFKLEDGDKPFQAMKDPDNHSIKLLYQIAENEGQVGK
>NZ_CP019985.1|WP_094425198.1|2007775_2009122_+|PTS-galactitol-transporter-subunit-IIC
MNVLQYILDLGPAVMLPAVIFVLGLLLRQGIGKSLRSGITIGVGFVGITLVISLLTDNLGPAAQEMAERFNLGLSIVDVGWPGASPMAWASNIGTVAIPVAILVNVVMLLLKWTRVVNVDIWNIWHMAFAGAIVSTASGSFWLGVLGVVIYAAFAYKLGDWFAPIIHKYNGLEGISIPHGTGAIMAPIAVVTDAIIEKIPGLKNVNINSDKIENRLGPIGEPAIIGAILGTVIGALAGYEVSAILQLGIQMAAVMLLMPTVVKFIMEGLMPIAEAAREMLDKRFSGQDYYIGLDPALLLGNSQVVAASLIFVPLTLVIAILIPGNEVLPFGDLATIGFFISIAVGIHGGNLFRTLISGTLIMTMTIWIANMMVGVHTQLALNTGTISGGQVASLDQGGSPLQFIMTELTTWQNLIPLIVVTAIYGFCVVFTIVQHKRGKLLPAETDKN
>NZ_CP019985.1|WP_094425196.1|2007474_2007750_+|PTS-galactitol-transporter-subunit-IIB
MKKVLVACGGAVATSTVAANKVKAILKENNIQADVSQCRVSELGSKSQGADLIISTAKVDRDYGVPVVHGLPFISGVGLDKTKQEILDILK
>NZ_CP019985.1|WP_157730390.1|2006992_2007472_+|PTS-sugar-transporter-subunit-IIA
MSNALLDRDLILLNQTCQTVEEVLETIAAPMQAKQFAKETYADGLKEREQSFATGIPTEPFGVAIPHTDASYVLESKIGLLTLKEPVSFGVMGAENDQVDVKVVLLLGLADGSAHLKALQTIVERIQDAHFVKKLASVQEKNEALALLDASITKQLEGE
>NZ_CP019985.1|WP_094425214.1|2017405_2017639_-|hypothetical-protein
MKAKFIFENGVYVEESPRDGTPVHVLAYLYNLIYQIETNAMVYIEDKNDQDTFAEENLHNVKSIIFEFEEQDRFTKD
>NZ_CP019985.1|WP_094425215.1|2017745_2017982_+|hypothetical-protein
MQGERFTIKGTVPENTSAYICLPAVANREELKALQLDPANVAPEEAETVFRHMRPDSVLTKQGSGPFSYTYQARMAKQ
>NZ_CP019985.1|WP_094425217.1|2018186_2019143_-|di-trans,poly-cis-decaprenylcistransferase
MGLILAVKTLSRRVPENRFYFFQGHSCRAYVKRFYVFLVATIEKQICFLNRSVYRLTSGKIKLYDERIVNVPRERIIINFINHIAIIPDGNRRWAKKKGLLSEGSLYDKGAANFQYITEALFSKGVNYVTFWVSSVDNLKNREKSLVKAMHKLYAKKFTELLNDSKIMENKIKVQVCGSWRTFLEKDTIDMIEQLLVKTANNDKGILTLLVAYDGKIERGQAVISLLDDHVLEKNINKDPLTFNSLLKKHSWTGYLPSVDFIIRTGSWNDPHNSADFLSFLTGDSQLYFPEVYWPDFDSNWLEKSLQEYTSRERRKGS
>NZ_CP019985.1|WP_169715931.1|2020671_2020821_+|hypothetical-protein
MAVSAVILLNADKEYVPGGTQLKKNERDSIDYWTKDNMKKAVPGAGMDE
>NZ_CP019985.1|WP_094425219.1|2020872_2021580_-|GntR-family-transcriptional-regulator
MKKRQFVADDLLSKIYQNKYAPGEKLPTERALATHYQVSRYTIRKAIKKLINIGSVQVVQGSGIFVTKTIRESPLIYNSLTEKKFKDIQSTIIAMQKKNMTPEIEKIFDRKNDFVWEFTRVRIVDYQKVQIETTQLPYSYFPNLTEEIAAGSVHEYVQQCGYDISHFITTYSAVNVTREQANLLNCKKGIAAMKIVNRGILNDGRVFEYSELINLDYAVSYFTPFNRFKHQFRKK
>NZ_CP019985.1|WP_094425221.1|2021661_2022861_-|starvation-sensing-protein-RspA
MEPNIITSIEAFVTNPHRHNFVVVKVETSLGLTGYGCATFQQRPLPVKMVVDQYLTPLLLGRDAHDIEDIWQMMMVNAYWRNGPIMNNAIAGIDMALWDMKAKLANMPLYQLFGGKSKSAIAAYAHADGLTLEELFENVDGLIKRGFKHIRCQLGKYGGKNQDMHLPERQLEGEYYDPDIYMRDVVRMFKALREKYGYSIHFLHDVHERLSPIQAIQLAKELEPYKPYFLEDVLPPDQNEWLAQLRAQCTTPIATGELFNNPMEWKHLIANRQIDYIRCHVSQIGGITPALKLGALCSQFGVKIAWHGPSDMTPIGVAVNTHLNIHLHQAAIQEIQEPEAIIEEMFPGSVQVKQGYIYPIDEVGIGVSFDETLAQNYPVVYRKHEWTQARLPNGAIHTP
>NZ_CP019985.1|WP_094425222.1|2023156_2024521_+|PTS-transporter-subunit-EIIC
MKDNELIPLIIEYVGGKNNIKQVWHCMTRLRFDLHDFSKIERDQIKELQGILGDQLTNDQYQIVIGTHVQKVHAALTEELGLDAGQSDKTGSEPAKKKGFFGAVLDVVSGVFGPIVPAIAGAGMIKGILAGLIALDVLSDESDAVIILDLVASSVFYFLPFFLAASAAKIFKTNPYLALAVAGGFMYPSLLDAAKLGEVTQFSFMGLPVPVINYSATVIPIILSVWALSYINKYVDKYMPNVLRTVFTPTLTLFIAIPFALIATGPLGAYVGSLLASFIEMLFNLSPILAGVVVGGIRPIAIVFGMHHAMTPIALQNFADNGFDMMMPMFFMTNMAIAGATFAVFFKSKSKKEKSVVLSAGVSALLGITEPALFGVLIKYKKAFIACTIASMAGATFFALLGVRIYGYILSSIVSLVAYVGPYFWFAILGIVLSVGIGFAVTYFTLKSKEVNSH
>NZ_CP019985.1|WP_094425224.1|2024982_2025480_+|hypothetical-protein
MAKKMGVAFLFVWLSAALAGCGMFAAGGQEIEEKPKLEAGVNEPPIPTITIGNEQFQPALGAYSWEIESSDGTKTREEVDIAPPHEQAKHMDSIAVAGEDELEIDFGSVNPPKPMDFHIWEGGKRRSVDGDMLLTDYKGTGSVIVELYGEWHEGHASYVFVLEVQ
>NZ_CP019985.1|WP_094425227.1|2025645_2028609_-|response-regulator
MSTKKQLLIVCVFLLTLLIIRLAWNAATGLPDQPTAKNGVLDLSDYAFSQPGYVSLEGEWQFTPQNDKEQTIKTLVAPSTQESEGTYQLDLHVQDTESFYGLYIHLPHGIFSVSANGQRLYQTSAENRDMSPVVLPSLQPDENGLIRLTLQMEEVALYSKYPTPRSLYFGPSKNIVGKNAIESLLQMAVAAIMIIHGIYACILKALKPTKKGILFFASAAFFAAAAVLLSDNKVLGYFIALNSEWDKRLTYFLYAGLSFSFLLFVLRTFAPSYKRTAIVATTLFGMYFTYLLFAPLAYFYKTSFLLSIALGVTFTMIAVIMLKVMLARVKGALLLYLAALAVASNVQWTILYGYVDRIATPTLMFYPVDLTVAFLCFSSFWFLRFFHAEDENAKLLTKLQREHKQKDQFLASTSHEMRNPLHGMMNIAQTVAAENKQVLDQKSQQSLELLVSIGRRMSYLLNDLIDLAVFKERKLTLQQEAIQLEPIIRRTVDTLNFLIDNEKTRFVVAIPNDFPLVFADANRVSQILFNLLHNAGKFTNEGTITIAASYSGKLATIRVTDTGKGMDQSTKARIFEPYEQGANADNEGLGLGLAICKELVEMHGGQINVVSSPGQGSSFSFTLPLAKSTNQQAIATALTTEQPNEAAAAQAPQQPEREAPFRILAVDDDPVNLKVLRHALSTKPYQLVTETSPKATLRKVTEERWDLVIADVMMPEMSGLELVKHIRQTYSVSELPILLVTARTQPEDIYAGFHAGANDYIGKPVDLIELQTRIEATLALKQAIEEQLRLEAAWLQAQIEPHFLFNTLNTIASLSTVDTDRMLDLIAEFGRYLRASFNEKNLSPVIPLSEELDLLRSYLYIEQERFGERLQVKWSIEEHVDCLVPPLSIQPLAENAILHGILKQEAGGTLEVHVYKKDGKVHIAIKDDGVGIDQDTLNTLFTQTKTTKKSIGLANTNLRLQKQLGNGLSVSSEIGKGTTVSFTAPLR
>NZ_CP019985.1|WP_094425229.1|2028693_2029812_-|response-regulator
MKAVLVDDEPHALTFLENQLLGVGDVEITGSFTSASTALDWVLSTPPDLLFLDIEIANVNGMELAETVLSKHPDIQIVFVTAYQEYAVKAFELNAVDYIMKPISKNRLKKTLERLQTKKQQESVPAEKTTICCLPSLQFFSGEKPIHIHWRTSKAKGLFLFLLHHLGHHVRKDVIIETFWPDSDYKKAYAQLYSTVYLIRKTLTSVFPSIQIDNFEQSYTLEVGDIHIDYLEWEKKWSQLPALSDGTLSAYLTLLDEYRGDYLREEDYLWAENKREHLKNLWRETATAVAIYLFERGQYEQAARLGQKIQEMYPFLEESYFMLMKIYAALNEPFYFERQYNKLVNMLDEEFAIDPSPELIKLRDECRKQLSE

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Crispr_ID: NZ_CP019985_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019985_10

2019471-2020497

Orphan

I-C

Consensus_repeat	Method
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	PILER-CR
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CRT

15 spacers

The CRISPR arrays of NZ_CP019985_10

>merge|NZ_CP019985|10|2019471-2020497|PILER-CR,CRISPRCasFinder,CRT
GTCGCACTCTTAATGAGTGCGTGGATTGAAATATTCCTTTGCCCCCTCTAGTAATCGCTTCGAAATGTCGCACTCTTAATGAGTGCGTGGATTGAAATCGGGATTACCTATACGCAGGATGACGCAAAGCTGAGTCGCACTCTTAATGAGTGCGTGGATTGAAATGTAGCTGAAATTTCCCTTCCTTTCGATGTGTTGAGTCGCACTCTTAATGAGTGCGTGGATTGAAATTCTCCTATTATTTTTTTATTAATCTACTTATCATGTCGCACTCTTAATGAGTGCGTGGATTGAAATGCCAAATATGTCGTGATAGTAACGTTTTAGAGCGGTCGCACTCTTAATGAGTGCGTGGATTGAAATTTGTGTCATGTCGTTATTAATCCCAAGTTGCTTGGTCGCACTCTTAATGAGTGCGTGGATTGAAATTGCTACAAAGGGCGAGAAGTCCTTAAAAGACCTAAGTCGCACTCTTAATGAGTGCGTGGATTGAAATACGCCTGCCAAGCCATCGAAGCGTAACGCCAAGTCGCACTCTTAATGAGTGCGTGGATTGAAATAACGGTATCTCAGCGTCCTGACTACGTACCTTGGTCGCACTCTTAATGAGTGCGTGGATTGAAATAGCATATCTTCAACAGATTTTCGAAGCGTCATCGTCGCACTCTTAATGAGTGCGTGGATTGAAATAAGAGAGGAAAACACTGAAAAAGAAAAAGGGGATGGTCGCACTCTTAATGAGTGCGTGGATTGAAATCTATCGAGGACGTTGTTAAGATAACTAAGGACTAAGTCGCACTCTTAATGAGTGCGTGGATTGAAATTCTTTGTCTGCTAGGCTGTCTAACGGCGGTTCAATCAGTCGCACTCTTAATGAGTGCGTGGATTGAAATAAATAATTGATAAATTAAGCAGCTAAAAAGATAAAGTCGCACTCTTAATGAGTGCGTGGATTGAAATGTAATAGCGTGGCCGCATCTGAAAAGGCTGTTAGTGTCGCACTCTTAATGAGTGCGTGGATTGAAAT

>NZ_CP019985|10|10|2019471-2020497|PILER-CR
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	ATTCCTTTGCCCCCTCTAGTAATCGCTTCGAAAT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CGGGATTACCTATACGCAGGATGACGCAAAGCTGA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GTAGCTGAAATTTCCCTTCCTTTCGATGTGTTGA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TCTCCTATTATTTTTTTATTAATCTACTTATCAT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GCCAAATATGTCGTGATAGTAACGTTTTAGAGCG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TTGTGTCATGTCGTTATTAATCCCAAGTTGCTTG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TGCTACAAAGGGCGAGAAGTCCTTAAAAGACCTAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	ACGCCTGCCAAGCCATCGAAGCGTAACGCCAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AACGGTATCTCAGCGTCCTGACTACGTACCTTG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AGCATATCTTCAACAGATTTTCGAAGCGTCATC
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AAGAGAGGAAAACACTGAAAAAGAAAAAGGGGATG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CTATCGAGGACGTTGTTAAGATAACTAAGGACTAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TCTTTGTCTGCTAGGCTGTCTAACGGCGGTTCAATCA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AAATAATTGATAAATTAAGCAGCTAAAAAGATAAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GTAATAGCGTGGCCGCATCTGAAAAGGCTGTTAGT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT

>NZ_CP019985|10|11|2019471-2020497|CRISPRCasFinder
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	ATTCCTTTGCCCCCTCTAGTAATCGCTTCGAAAT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CGGGATTACCTATACGCAGGATGACGCAAAGCTGA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GTAGCTGAAATTTCCCTTCCTTTCGATGTGTTGA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TCTCCTATTATTTTTTTATTAATCTACTTATCAT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GCCAAATATGTCGTGATAGTAACGTTTTAGAGCG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TTGTGTCATGTCGTTATTAATCCCAAGTTGCTTG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TGCTACAAAGGGCGAGAAGTCCTTAAAAGACCTAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	ACGCCTGCCAAGCCATCGAAGCGTAACGCCAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AACGGTATCTCAGCGTCCTGACTACGTACCTTG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AGCATATCTTCAACAGATTTTCGAAGCGTCATC
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AAGAGAGGAAAACACTGAAAAAGAAAAAGGGGATG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CTATCGAGGACGTTGTTAAGATAACTAAGGACTAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TCTTTGTCTGCTAGGCTGTCTAACGGCGGTTCAATCA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AAATAATTGATAAATTAAGCAGCTAAAAAGATAAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GTAATAGCGTGGCCGCATCTGAAAAGGCTGTTAGT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT

>NZ_CP019985|10|9|2019471-2020497|CRT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	ATTCCTTTGCCCCCTCTAGTAATCGCTTCGAAAT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CGGGATTACCTATACGCAGGATGACGCAAAGCTGA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GTAGCTGAAATTTCCCTTCCTTTCGATGTGTTGA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TCTCCTATTATTTTTTTATTAATCTACTTATCAT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GCCAAATATGTCGTGATAGTAACGTTTTAGAGCG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TTGTGTCATGTCGTTATTAATCCCAAGTTGCTTG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TGCTACAAAGGGCGAGAAGTCCTTAAAAGACCTAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	ACGCCTGCCAAGCCATCGAAGCGTAACGCCAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AACGGTATCTCAGCGTCCTGACTACGTACCTTG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AGCATATCTTCAACAGATTTTCGAAGCGTCATC
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AAGAGAGGAAAACACTGAAAAAGAAAAAGGGGATG
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	CTATCGAGGACGTTGTTAAGATAACTAAGGACTAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	TCTTTGTCTGCTAGGCTGTCTAACGGCGGTTCAATCA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	AAATAATTGATAAATTAAGCAGCTAAAAAGATAAA
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT	GTAATAGCGTGGCCGCATCTGAAAAGGCTGTTAGT
GTCGCACTCTTAATGAGTGCGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP019985.1\|WP_094425233.1\|2036800_2037418_+\|class-D-sortase	unknown	unknown	gnl\|CDD\|320681
NZ_CP019985.1\|WP_169715931.1\|2020671_2020821_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP019985.1\|WP_094425224.1\|2024982_2025480_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425219.1\|2020872_2021580_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP019985.1\|WP_094425235.1\|2037730_2038069_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP019985.1\|WP_094425227.1\|2025645_2028609_-\|response-regulator	unknown	unknown	gnl\|CDD\|225519
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP019985.1\|WP_094425214.1\|2017405_2017639_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425215.1\|2017745_2017982_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019985.1\|WP_094425221.1\|2021661_2022861_-\|starvation-sensing-protein-RspA	unknown	unknown	gnl\|CDD\|239438
NZ_CP019985.1\|WP_094425229.1\|2028693_2029812_-\|response-regulator	unknown	unknown	gnl\|CDD\|226456
NZ_CP019985.1\|WP_094425210.1\|2015181_2015406_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
NZ_CP019985.1\|WP_094425208.1\|2014694_2015171_+\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	unknown	unknown	gnl\|CDD\|237466
NZ_CP019985.1\|WP_094429217.1\|2015450_2016254_+\|DUF817-domain-containing-protein	unknown	unknown	gnl\|CDD\|377545
NZ_CP019985.1\|WP_094425222.1\|2023156_2024521_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_CP019985.1\|WP_169715932.1\|2030016_2036784_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|227268
NZ_CP019985.1\|WP_094425217.1\|2018186_2019143_-\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850

Protein	Function_ID	Function_description	E-value
NZ_CP019985.1\|WP_094425235.1\|2037730_2038069_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.84134e-14
NZ_CP019985.1\|WP_094425200.1\|2009142_2010201_+\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	9.912e-163
NZ_CP019985.1\|WP_094425233.1\|2036800_2037418_+\|class-D-sortase	gnl\|CDD\|320681	cd06166, Sortase_D_2, Sortase domain found in subfamily 2 of the class D family of sortases. Class D sortases are cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Firmicutes). They anchor surface proteins bearing a cell wall sorting signal to peptidoglycans of the bacterial cell wall envelope, which is responsible for spore formation under anaerobic conditions. This involves a transpeptidation reaction in which the surface protein substrate is cleaved at the cell wall sorting signal and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical subfamily 2 of class D sortase from Clostridium perfringens (named Cp-SrtD) recognizes the LPQTGS signal motif for transpeptidation. Its catalytic activity is in a metal cation- and temperature- dependent manner. The presence of magnesium appears to enhance Cp-SrtD catalysis towards the LPQTGS signal motif.	8.85174e-45
NZ_CP019985.1\|WP_094425219.1\|2020872_2021580_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	6.45925e-49
NZ_CP019985.1\|WP_094425227.1\|2025645_2028609_-\|response-regulator	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	7.94725e-49
NZ_CP019985.1\|WP_094425202.1\|2010201_2011071_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	1.11588e-130
NZ_CP019985.1\|WP_094429217.1\|2015450_2016254_+\|DUF817-domain-containing-protein	gnl\|CDD\|377545	pfam05675, DUF817, Protein of unknown function (DUF817). This family consists of several bacterial proteins of unknown function.	2.14243e-131
NZ_CP019985.1\|WP_094425217.1\|2018186_2019143_-\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	2.63954e-50
NZ_CP019985.1\|WP_094425229.1\|2028693_2029812_-\|response-regulator	gnl\|CDD\|226456	COG3947, COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms].	3.1027e-82
NZ_CP019985.1\|WP_094425210.1\|2015181_2015406_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	1.13581e-29
NZ_CP019985.1\|WP_094425208.1\|2014694_2015171_+\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	5.70761e-34
NZ_CP019985.1\|WP_094425206.1\|2013455_2014364_-\|GTP-cyclohydrolase-I-FolE2	gnl\|CDD\|237466	PRK13674, PRK13674, GTP cyclohydrolase I FolE2.	6.70046e-120
NZ_CP019985.1\|WP_094425204.1\|2012988_2013345_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.71198e-29
NZ_CP019985.1\|WP_094425222.1\|2023156_2024521_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	1.65923e-135
NZ_CP019985.1\|WP_169715932.1\|2030016_2036784_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|227268	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP019985.1\|WP_094425221.1\|2021661_2022861_-\|starvation-sensing-protein-RspA	gnl\|CDD\|239438	cd03322, RspA, The starvation sensing protein RspA from E.coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad.	0

>NZ_CP019985.1|WP_094425217.1|2018186_2019143_-|di-trans,poly-cis-decaprenylcistransferase
MGLILAVKTLSRRVPENRFYFFQGHSCRAYVKRFYVFLVATIEKQICFLNRSVYRLTSGKIKLYDERIVNVPRERIIINFINHIAIIPDGNRRWAKKKGLLSEGSLYDKGAANFQYITEALFSKGVNYVTFWVSSVDNLKNREKSLVKAMHKLYAKKFTELLNDSKIMENKIKVQVCGSWRTFLEKDTIDMIEQLLVKTANNDKGILTLLVAYDGKIERGQAVISLLDDHVLEKNINKDPLTFNSLLKKHSWTGYLPSVDFIIRTGSWNDPHNSADFLSFLTGDSQLYFPEVYWPDFDSNWLEKSLQEYTSRERRKGS
>NZ_CP019985.1|WP_094425215.1|2017745_2017982_+|hypothetical-protein
MQGERFTIKGTVPENTSAYICLPAVANREELKALQLDPANVAPEEAETVFRHMRPDSVLTKQGSGPFSYTYQARMAKQ
>NZ_CP019985.1|WP_094425214.1|2017405_2017639_-|hypothetical-protein
MKAKFIFENGVYVEESPRDGTPVHVLAYLYNLIYQIETNAMVYIEDKNDQDTFAEENLHNVKSIIFEFEEQDRFTKD
>NZ_CP019985.1|WP_094429217.1|2015450_2016254_+|DUF817-domain-containing-protein
MRPLKQLVRFGWEQALSCLFPVVIFASLAITQLVPLPFLPRYDWLLIICLFMQWWMVRSGLETWDELKVITLFHLIGLALELFKVHMGSWSYPEEGYSKVFGVPLYSGFMYASVASYLCQAWRRLKIELVKWPPLLLVVPLAAAIYLNFFTHHFWIDIRFWLAGLVIIVFWPSWVTYEVNGTRYRMPLALSFVLIGFFIWIAENIATFFGAWEYPNQTEAWSLVHLGKVSSWLLLVIVSFLIVATLKQVKGKRSTGVDASQSFIKKQ
>NZ_CP019985.1|WP_094425210.1|2015181_2015406_+|helix-turn-helix-transcriptional-regulator
MAIIINVDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRLSTLDAICKALDCQPGDLLEYRSDANLHDE
>NZ_CP019985.1|WP_094425208.1|2014694_2015171_+|DUF2975-domain-containing-protein
MKRGSTLFLKLAVMLMGSPVLALCIFGLVWLPSHPVDPHYDHILYPIFIGVFLTVIPFFVALSQAFKLLSYIDKNQSFSELSTRALKNIKYCAVIISGLYVAIMPFFYLLADRDDAPGLLFMGVVPLFASTVIAVFAAVLQRLFQEAIDIKSENDLTV
>NZ_CP019985.1|WP_094425206.1|2013455_2014364_-|GTP-cyclohydrolase-I-FolE2
MKNNLRNLNLPDKKERHRRFGSVPPTIGVKPCNKDEMIDLQNTPDDFLFDLQSVGICNVQHPITLQSSHSPKIQNTIGTFKMTTSLDSNAKGINMSRLTEQLDHYYQEGWTVDFQNLYTFTKELTERMDQLTAEVEVSFPWFFERNAPKSDKTGLMKAVGSIKVRYDNKNGFSHEAQLSVGVTTLCPCSKEISEYSAHNQRGFVTMAIELYDPLHCEKDWKATLLHAAESNASAMIHPVLKRPDEKFVTEKAYENPRFVEDMVRLIAADLYEMDFVKRFTVECRNEESIHLHDAIAKVSYQK
>NZ_CP019985.1|WP_094425204.1|2012988_2013345_+|MmcQ/YjbR-family-DNA-binding-protein
MLTREDIFKHVKEKFRTSPDYPFQKFPTYAALRHKANGKWYGLVMNVHPEKLGLDGNDEIDILNLKCHPEVSGSLRNGKSILPGYHMDKENWISIVLERVDSEEDAYHLIEQSFSLTK
>NZ_CP019985.1|WP_094425202.1|2010201_2011071_+|class-II-fructose-bisphosphate-aldolase
MGLQSTTPMLKKAKANKHGIVAFNVHSFDSIFWVLEAAAELKSPVILQTTVGTVKSLGAKNIAEVAKAAAEHYQVPTGLHLDHCTDFEVIKDAIRAGYTSVMIDASMHPFAENVARTKEVVALASSLGVNVEAELGKVGGVEDDIVVDEADAQKAIPEECRQFVEETGVPTLAPAIGTAHGIYKGKPEIDFERIAKIAEMVDVPLVLHGGSAVPEDDVRRCVALGMAKVNVSTELKNAYSEAIRDHFANEPDSLDPRAYLQKAKEAAKEMAKSKIRMVGSENTVVPAFA
>NZ_CP019985.1|WP_094425200.1|2009142_2010201_+|galactitol-1-phosphate-5-dehydrogenase
MKALVLEANQSFTIKDIETPVPKEDEALIKVAYCGICGSDLARYFDGKVHNYPIVLGHEFSGTVEAVGASVDSVAVGDRVVVAPLLPNKDDAFMQKGSPALSSSYSFLGSRENGAMAEYVVVKAENLLVLPETVTLEEAALIEPLTVAIHGIERIVLPAGEHVYVLGAGTIGIMTILALKARGAGKVTAIDINDEKLAFAKKIGADDAVNSLNVDPVQYASKHGKPGAVIETAGVPSAQEQAVALAEKKGKIVFVGTASGDVTFPAATFEKILREELEITGSWMSYSGPFPGYEWQAAIDYIASGKIDVKPLIHDVFKLEDGDKPFQAMKDPDNHSIKLLYQIAENEGQVGK
>NZ_CP019985.1|WP_169715931.1|2020671_2020821_+|hypothetical-protein
MAVSAVILLNADKEYVPGGTQLKKNERDSIDYWTKDNMKKAVPGAGMDE
>NZ_CP019985.1|WP_094425219.1|2020872_2021580_-|GntR-family-transcriptional-regulator
MKKRQFVADDLLSKIYQNKYAPGEKLPTERALATHYQVSRYTIRKAIKKLINIGSVQVVQGSGIFVTKTIRESPLIYNSLTEKKFKDIQSTIIAMQKKNMTPEIEKIFDRKNDFVWEFTRVRIVDYQKVQIETTQLPYSYFPNLTEEIAAGSVHEYVQQCGYDISHFITTYSAVNVTREQANLLNCKKGIAAMKIVNRGILNDGRVFEYSELINLDYAVSYFTPFNRFKHQFRKK
>NZ_CP019985.1|WP_094425221.1|2021661_2022861_-|starvation-sensing-protein-RspA
MEPNIITSIEAFVTNPHRHNFVVVKVETSLGLTGYGCATFQQRPLPVKMVVDQYLTPLLLGRDAHDIEDIWQMMMVNAYWRNGPIMNNAIAGIDMALWDMKAKLANMPLYQLFGGKSKSAIAAYAHADGLTLEELFENVDGLIKRGFKHIRCQLGKYGGKNQDMHLPERQLEGEYYDPDIYMRDVVRMFKALREKYGYSIHFLHDVHERLSPIQAIQLAKELEPYKPYFLEDVLPPDQNEWLAQLRAQCTTPIATGELFNNPMEWKHLIANRQIDYIRCHVSQIGGITPALKLGALCSQFGVKIAWHGPSDMTPIGVAVNTHLNIHLHQAAIQEIQEPEAIIEEMFPGSVQVKQGYIYPIDEVGIGVSFDETLAQNYPVVYRKHEWTQARLPNGAIHTP
>NZ_CP019985.1|WP_094425222.1|2023156_2024521_+|PTS-transporter-subunit-EIIC
MKDNELIPLIIEYVGGKNNIKQVWHCMTRLRFDLHDFSKIERDQIKELQGILGDQLTNDQYQIVIGTHVQKVHAALTEELGLDAGQSDKTGSEPAKKKGFFGAVLDVVSGVFGPIVPAIAGAGMIKGILAGLIALDVLSDESDAVIILDLVASSVFYFLPFFLAASAAKIFKTNPYLALAVAGGFMYPSLLDAAKLGEVTQFSFMGLPVPVINYSATVIPIILSVWALSYINKYVDKYMPNVLRTVFTPTLTLFIAIPFALIATGPLGAYVGSLLASFIEMLFNLSPILAGVVVGGIRPIAIVFGMHHAMTPIALQNFADNGFDMMMPMFFMTNMAIAGATFAVFFKSKSKKEKSVVLSAGVSALLGITEPALFGVLIKYKKAFIACTIASMAGATFFALLGVRIYGYILSSIVSLVAYVGPYFWFAILGIVLSVGIGFAVTYFTLKSKEVNSH
>NZ_CP019985.1|WP_094425224.1|2024982_2025480_+|hypothetical-protein
MAKKMGVAFLFVWLSAALAGCGMFAAGGQEIEEKPKLEAGVNEPPIPTITIGNEQFQPALGAYSWEIESSDGTKTREEVDIAPPHEQAKHMDSIAVAGEDELEIDFGSVNPPKPMDFHIWEGGKRRSVDGDMLLTDYKGTGSVIVELYGEWHEGHASYVFVLEVQ
>NZ_CP019985.1|WP_094425227.1|2025645_2028609_-|response-regulator
MSTKKQLLIVCVFLLTLLIIRLAWNAATGLPDQPTAKNGVLDLSDYAFSQPGYVSLEGEWQFTPQNDKEQTIKTLVAPSTQESEGTYQLDLHVQDTESFYGLYIHLPHGIFSVSANGQRLYQTSAENRDMSPVVLPSLQPDENGLIRLTLQMEEVALYSKYPTPRSLYFGPSKNIVGKNAIESLLQMAVAAIMIIHGIYACILKALKPTKKGILFFASAAFFAAAAVLLSDNKVLGYFIALNSEWDKRLTYFLYAGLSFSFLLFVLRTFAPSYKRTAIVATTLFGMYFTYLLFAPLAYFYKTSFLLSIALGVTFTMIAVIMLKVMLARVKGALLLYLAALAVASNVQWTILYGYVDRIATPTLMFYPVDLTVAFLCFSSFWFLRFFHAEDENAKLLTKLQREHKQKDQFLASTSHEMRNPLHGMMNIAQTVAAENKQVLDQKSQQSLELLVSIGRRMSYLLNDLIDLAVFKERKLTLQQEAIQLEPIIRRTVDTLNFLIDNEKTRFVVAIPNDFPLVFADANRVSQILFNLLHNAGKFTNEGTITIAASYSGKLATIRVTDTGKGMDQSTKARIFEPYEQGANADNEGLGLGLAICKELVEMHGGQINVVSSPGQGSSFSFTLPLAKSTNQQAIATALTTEQPNEAAAAQAPQQPEREAPFRILAVDDDPVNLKVLRHALSTKPYQLVTETSPKATLRKVTEERWDLVIADVMMPEMSGLELVKHIRQTYSVSELPILLVTARTQPEDIYAGFHAGANDYIGKPVDLIELQTRIEATLALKQAIEEQLRLEAAWLQAQIEPHFLFNTLNTIASLSTVDTDRMLDLIAEFGRYLRASFNEKNLSPVIPLSEELDLLRSYLYIEQERFGERLQVKWSIEEHVDCLVPPLSIQPLAENAILHGILKQEAGGTLEVHVYKKDGKVHIAIKDDGVGIDQDTLNTLFTQTKTTKKSIGLANTNLRLQKQLGNGLSVSSEIGKGTTVSFTAPLR
>NZ_CP019985.1|WP_094425229.1|2028693_2029812_-|response-regulator
MKAVLVDDEPHALTFLENQLLGVGDVEITGSFTSASTALDWVLSTPPDLLFLDIEIANVNGMELAETVLSKHPDIQIVFVTAYQEYAVKAFELNAVDYIMKPISKNRLKKTLERLQTKKQQESVPAEKTTICCLPSLQFFSGEKPIHIHWRTSKAKGLFLFLLHHLGHHVRKDVIIETFWPDSDYKKAYAQLYSTVYLIRKTLTSVFPSIQIDNFEQSYTLEVGDIHIDYLEWEKKWSQLPALSDGTLSAYLTLLDEYRGDYLREEDYLWAENKREHLKNLWRETATAVAIYLFERGQYEQAARLGQKIQEMYPFLEESYFMLMKIYAALNEPFYFERQYNKLVNMLDEEFAIDPSPELIKLRDECRKQLSE
>NZ_CP019985.1|WP_169715932.1|2030016_2036784_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKNKATAILLIFVLLVQAFIAQLAGAVQVYAQEPEASTFEALASLVDENGEPLTEEATLAAEDQVHVKIDWSLTGHTQQETYHIKLPEQWQPDKIEWKEEGHGDEMVTYSLNGTELTMSFPEQEEAVQASGTVELSAYFSQDAIGEAAEADLVFLVGDTAQVIPVSFQVKEELEQEPVQEEAPASTEEEQVNEEGDTPESEKQAPETEKEVETPVADEEEVAAEEKQEEASKEEQEEASKENEEDVEANDQEAEATEAAEADVVSQAVVGEIEKNIITGIVLRDGDGNLINADENPGNKPALGDDVQIEITWELPNGHGYGSGSTFTFSLPDIFHVYNDVNGELTFGDTTVGSFTLKEDGTVVMTFNEQIEELSNVHGLLNFRTIIREDLVGDVDREVVFDVKDEVVANIPISLQPKAGSDIDKRGQVNRAYNATEIEWTVDFNKQLKTINQAVLKDPIQQRQALKKDSIEVYKLDVQLDGTVKQGERVDPSEYTVTEDPFEIQFGDISSAYRVVFSTEITDEDGTNYANKATLTGKNSEDLSAEASVTTRRGEALAKRNASYDPATQTITWEIHYNYNEKSIKQADAVLVDSFSESHDLIADSIKVERITLDENGNEKEAVNADNYEVTPGQHGFELKFTEDINDAYKITYKTKANERVLEDGKIDNIVKSGGREANGSQGTSQQVLHKGYSNINYKDKTVQWRIDFNRDGYEMKDVFFTDTFTNGGLELERDSFKVLRKGIEVDPSEYTLEETDEGFTLRFHEPISEPHQIVYTTKFHYDELRGDQFRNHVHMKWTTEDGKTWEKEASSGFKPDTYTTNNGFKNGSYNAVTKEITWTVGINYDLKNLTVMNVTDYIKGKQTLVEGSIEVYRAELTGGSNGIRKGEKLEPSEYELELLSDEKPGFHVRFPGERDEAYIIEYKTSVEGELIVDRYDNTATLSSEGREPVDLNAHVTVQHGGSYVEKGGKQNGKVIDWNVAINAGQSKVSEAKVIDQQQANQILLEDSFRLYATTVSGNGQFAKAEELERDKDYTLEINTADDGSQTFVLSFLEDISRPYILEYQSYINASDGEEISNTIKFEGKQITTERTDSSETIKVRLTDGGGSGSGERGSLEVIKVDANSKEVLPGARFTLYDKEGKIALRTVVTGEDGKAIFRNLRYDDYLLKEDSAPDGYVVGIDAETVKVDSKTTTITVENKKITREVALTKVDVDTKQALAGAEFALEKKAGDNWETIEEGLVTNEDGQLVLTELEPGDYRFVETKAPVGYELDNQPIEFTIDDKQTERILLTKDNVIIKGSAVLKKVDAATGEPLEGVSFKLVQDGKTIKEDLVSDKDGFVKVSGLRPGAYELIETTALENYKLDPTPIPFEIEAGQEKELTIGEKENALVTGGIRLTKVDADDNRLALQGAVFALLDEEGNVLREGLETDDSGQLTIEQLAPGNYQLVETKAPVDYELDDTPIPFTIEKSQQETIQVERKVENHLITGAVELKKQDSKDGSVLEGAEFSLYTEDGELVEEGLVTGEDGTVYVEGLKPGKYYFVETQAPAHYQADDTKRPFTIERSQLEKVELIVENVLIPGAATLIKVDEDNENVRLEGAVYTLEDEDGTVIEEGLTTDEEGRIVVTDLPPGVYYFIETKAPEHYQLDNTPIKVEIEKGQQEAIQVKAVNKLVTGSVVLEKHDSESDALLLEGAEFSLVDENGNTVKEGLTTDASGRIVVEGLKPGKYAFVETKAPADYQLDEKPIPFEIVRSQKEALVVEKSNTLIPGAVELVKVNQHDTAETLAGAEFTLLDGEGNVLEEGLTTDEEGKLRVEQLAPGTYQFIETKAPQGFELSSEPLPFVIERSQQETLKVTAFNKLVRGEIELSKIDSDNDAIALKGAEFELRTKTGEVVASGTTNDAGKLVLSDILPGDYVLVETKAPFGYQLDATPIDVTVDRDQKTAVSVTKENTLIPGSVIVEKVDAADQQLLLTGAAFSLLDEAGNVLQENLMTDQHGRLEINNLPPGDYQLVETKAPEHYQLDETPIVFTIEKGQTAAPVITVENTLTPGSVEIVKVDSSDGARLEGAVFTVLTEDGDIVAEGLTTDGSGSVQLDGLAPGKYQLVETKAPADYQLNETPILFEISKGQTERLVLTVENTLIPPGEEPKEPQPPSEPKEPQPPSEPKQPPTEPGDGQTPTGPQNNNGGTGTGKTGQPKAGGGEPSPLLSKGAQPASGGQLPQTGETEMFMLMVAGLLLMAIGALTLVNGRLARKRG
>NZ_CP019985.1|WP_094425233.1|2036800_2037418_+|class-D-sortase
MRKRTFFIGMLLIIAGLALVAVPLTKEWQQANGVAQLEKALAAVQTGETIEETDGEATIGETDESPSPWTKEQLEAVMELEIPAIDLKQYILDETTDENLALTLTQIKQEQVPGEGNFAVAGHRGYRGDRHFRQLLNVQKGDEIRLHADDGKTYIYVVKSTEIIEPTDVDVLNDGEQPEITLITCTLSGQQRVAVKGDLIDVIEA
>NZ_CP019985.1|WP_094425235.1|2037730_2038069_-|helix-turn-helix-domain-containing-protein
MAELNDRLRELRKAHQLTQQEVASFLGITESAYGFYEQGRNEPSIAKLKQLAEKYNVSIAYIAGETDIKAAPSDKVKENGSAYTFTNLDEEEKEFLGEQLELFRRLKKKKGH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019985_6	6.30\|2001955\|35\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001955-2001989	35	NZ_CP012476	Bacillus clausii strain ENTPro plasmid, complete sequence	2209-2243	0	1.0
NZ_CP019985_6	6.31\|2002022\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2002022-2002055	34	NZ_CP012476	Bacillus clausii strain ENTPro plasmid, complete sequence	20147-20180	0	1.0
NZ_CP019985_7	7.11\|2004128\|32\|NZ_CP019985\|CRISPRCasFinder	2004128-2004159	32	NZ_CP012476	Bacillus clausii strain ENTPro plasmid, complete sequence	14480-14511	0	1.0
NZ_CP019985_7	7.13\|2004128\|34\|NZ_CP019985\|CRT	2004128-2004161	34	NZ_CP012476	Bacillus clausii strain ENTPro plasmid, complete sequence	14478-14511	0	1.0
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT366947	Bacillus phage Hyb2phi3Ts-SPbeta, complete genome	116888-116920	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KY030782	Bacillus phage phi3T, complete genome	116557-116589	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_001884	Bacillus phage SPBc2, complete genome	125920-125952	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	AF020713	Bacteriophage SPBc2 complete genome	125920-125952	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT366946	Bacillus phage Hyb1phi3Ts-SPbeta, complete genome	118737-118769	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT366948	Bacillus phage Hyb3phi3Ts-SPbeta, complete genome	115635-115667	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT366945	Bacillus phage phi3Ts, complete genome	116022-116054	1	0.97
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NZ_CP035407	Bacillus subtilis strain SRCM103612 plasmid unnamed1	34036-34068	1	0.97
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NZ_CP031073	Bacillus mycoides strain BPN401 plasmid pl50, complete sequence	6975-7008	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK449000	Streptococcus phage Javan64, complete genome	8193-8226	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MN689516	Lactococcus phage CHPC148, complete genome	25995-26028	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NC_004746	Lactococcus phage 4268, complete genome	8002-8035	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	HB961993	Sequence 94668 from Patent EP2096177	472-505	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK448917	Streptococcus phage Javan362, complete genome	12877-12910	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK448831	Streptococcus phage Javan83, complete genome	9218-9251	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065487	Streptococcus phage IPP48, complete genome	8355-8388	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	HD019403	Sequence 94668 from Patent EP2199304	472-505	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	AF489521	Lactococcus bacteriophage 4268, complete genome	8002-8035	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK449006	Streptococcus phage Javan78, complete genome	9218-9251	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065500	Streptococcus phage IPP64, complete genome	13842-13875	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MH674343	Methanobacterium virus Drs3, complete genome	8502-8535	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	HB955207	Sequence 87882 from Patent EP2096177	472-505	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065491	Streptococcus phage IPP53, complete genome	8527-8560	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	HD012617	Sequence 87882 from Patent EP2199304	472-505	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	DQ113772	Streptococcus pneumoniae bacteriophage MM1 1998, complete genome	7951-7984	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	AJ302074	Streptococcus pneumoniae bacteriophage MM1 complete genome	7951-7984	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NC_031907	Streptococcus phage phiARI0746, complete genome	23946-23979	2	0.941
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065462	Streptococcus phage IPP21, complete genome	11582-11615	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065471	Streptococcus phage IPP30, complete genome	11913-11946	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065461	Streptococcus phage IPP20, complete genome	11531-11564	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065470	Streptococcus phage IPP29, complete genome	10812-10845	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065453	Streptococcus phage IPP11, complete genome	10956-10989	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065498	Streptococcus phage IPP62, complete genome	11103-11136	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY065459	Streptococcus phage IPP18, complete genome	10851-10884	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	FR671409	Streptococcus phage 11865	22511-22544	3	0.912
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NC_030946	Streptococcus phage phiARI0923, complete genome	23898-23931	3	0.912
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK584893	Staphylococcus phage vBSM-A1, complete genome	106039-106071	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN539738	UNVERIFIED: Staphylococcus phage vB_SauM-D, complete genome	122660-122692	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080600	UNVERIFIED: Staphylococcus phage vB_SauM_EW71, complete genome	81464-81496	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KU878088	Bacillus phage AR9, complete genome	63911-63943	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KU878088	Bacillus phage AR9, complete genome	150687-150719	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KU878088	Bacillus phage AR9, complete genome	151235-151267	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	EF136587	Staphylococcus phage 812 strain phi812 putative holin, endolysin (lyt812), and putative HNH endonuclease (lyt812) genes, complete cds	2187-2219	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_047721	Staphylococcus phage SA5, complete genome	36237-36269	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080586	UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome	58457-58489	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080586	UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome	115650-115682	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK656892	Staphylococcus phage vBSP-A20, complete genome	101465-101497	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080594	UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome	113415-113447	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080594	UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome	29813-29845	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KR908644	Staphylococcus phage IME-SA119, complete genome	10327-10359	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080582	UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome	131318-131350	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080582	UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome	47716-47748	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MF360957	Bacillus virus PBS1, complete genome	225362-225394	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MF360957	Bacillus virus PBS1, complete genome	60513-60545	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MF360957	Bacillus virus PBS1, complete genome	61067-61099	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN539736	UNVERIFIED: Staphylococcus phage vB_SauM-A, complete genome	134625-134657	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KY581279	Staphylococcus phage pSa-3, complete genome	32320-32352	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK417514	Staphylococcus virus Sa83, complete genome	35446-35478	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN336263	Staphylococcus phage Sb1M_9832, complete genome	27911-27943	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN336262	Staphylococcus phage Sb1M_6168, complete genome	27911-27943	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	AY954969	Bacteriophage G1, complete genome	131370-131402	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK331931	Staphylococcus phage Sa30, complete genome	35798-35830	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	JX080302	Staphylococcus phage 676Z, complete genome	35839-35871	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN047438	Staphylococcus phage vB_SauM-515A1	34899-34931	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MF405094	Staphylococcus phage JA1, complete genome	35042-35074	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN336261	Staphylococcus phage Sb1_8383, complete genome	27911-27943	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MN539737	UNVERIFIED: Staphylococcus phage vB_SauM-C, complete genome	135624-135656	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	EU418428	Staphylococcus phage A5W, complete genome	34920-34952	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KP687431	Staphylococcus phage IME-SA1, complete genome	8272-8304	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK417516	Staphylococcus virus J-Sa36, complete genome	34946-34978	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MT080602	UNVERIFIED: Staphylococcus phage vB_SauM_EW74, complete genome	128610-128642	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KJ206561	Staphylococcus phage 812 isolate host-range mutant K1, complete genome	35084-35116	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KP687432	Staphylococcus phage IME-SA2, complete genome	26616-26648	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_047722	Staphylococcus phage Staph1N, complete genome	34917-34949	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_047723	Staphylococcus phage A3R, complete genome	34792-34824	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_047720	Staphylococcus phage ISP complete genome	131374-131406	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	JX080303	Staphylococcus phage Fi200W, complete genome	35795-35827	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MG656408	Staphylococcus phage B1, complete genome	35469-35501	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KF766114	Staphylococcus phage K, complete genome	34948-34980	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KR902361	Staphylococcus phage IME-SA118, complete genome	41366-41398	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MH844529	Staphylococcus phage 812h1, complete genome	35822-35854	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KC012913	Staphylococcus phage Team1, complete genome	35454-35486	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK331930	Staphylococcus phage CH1, complete genome	133748-133780	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	JX080305	Staphylococcus phage P4W, complete genome	34897-34929	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	KJ206560	Staphylococcus phage 812 isolate host-range mutant 812a, complete genome	35152-35184	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MF398190	Staphylococcus phage vB_SauM-fRuSau02, complete genome	35468-35500	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MK417515	Staphylococcus virus Sa87, complete genome	36287-36319	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MH844528	Staphylococcus phage 812, complete genome	34946-34978	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_007066	Staphylococcus phage G1, complete genome	131370-131402	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	JX080304	Staphylococcus phage MSA6, complete genome	35437-35469	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	MH136584	Staphylococcus phage HYZ21, complete genome	25933-25965	3	0.909
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_023009	Staphylococcus phage Sb-1, complete genome	27849-27881	3	0.909
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY705255	Streptococcus phage P0095, complete genome	33672-33705	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY705251	Streptococcus phage P0091, complete genome	32784-32817	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KX879643	Streptococcus phage CHPC1151, complete genome	31703-31736	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK448735	Streptococcus phage Javan349, complete genome	11489-11522	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK202161	Streptococcus phage CHPC1282, complete genome	32490-32523	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY705252	Streptococcus phage P0092, complete genome	31851-31884	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MH937506	Streptococcus phage CHPC1148, complete genome	35558-35591	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY705253	Streptococcus phage P0093, complete genome	32637-32670	4	0.882
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KY705254	Streptococcus phage P0094, complete genome	31040-31073	4	0.882
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	LC557520	Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome	28248-28280	4	0.879
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK448806	Streptococcus phage Javan565, complete genome	9299-9332	5	0.853
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK448990	Streptococcus phage Javan584, complete genome	7586-7619	5	0.853
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	KX077891	Streptococcus phage phiJH1301-1, complete genome	16087-16120	5	0.853
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	MK448812	Streptococcus phage Javan577, complete genome	8000-8033	5	0.853
NZ_CP019985_7	7.11\|2004128\|32\|NZ_CP019985\|CRISPRCasFinder	2004128-2004159	32	KC139511	Salmonella phage FSL SP-101, partial genome	32921-32952	6	0.812
NZ_CP019985_3	3.11\|1877893\|35\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	1877893-1877927	35	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	711138-711172	7	0.8
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NZ_CP046125	Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence	6678-6711	7	0.794
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NZ_CP046125	Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence	56007-56040	7	0.794
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NZ_CP046125	Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence	73241-73274	7	0.794
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NZ_CP046125	Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence	111389-111422	7	0.794
NZ_CP019985_6	6.11\|2000707\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2000707-2000740	34	NZ_CP033741	Enterococcus sp. FDAARGOS_553 plasmid unnamed2, complete sequence	9013-9046	7	0.794
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_049350	Vibrio phage VCO139, complete genome	30859-30891	7	0.788
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_021540	Vibrio phage JA-1, complete genome	31166-31198	7	0.788
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_049380	Vibrio phage JSF3, complete genome	37433-37465	7	0.788
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NZ_CP006906	Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence	16393-16425	7	0.788
NZ_CP019985_7	7.14\|2004194\|33\|NZ_CP019985\|CRT	2004194-2004226	33	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	83313-83345	7	0.788
NZ_CP019985_7	7.14\|2004194\|33\|NZ_CP019985\|CRT	2004194-2004226	33	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	229441-229473	7	0.788
NZ_CP019985_7	7.14\|2004194\|33\|NZ_CP019985\|CRT	2004194-2004226	33	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	271586-271618	7	0.788
NZ_CP019985_7	7.14\|2004194\|33\|NZ_CP019985\|CRT	2004194-2004226	33	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	144452-144484	7	0.788
NZ_CP019985_8	8.10\|2012129\|33\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2012129-2012161	33	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1157050-1157082	7	0.788
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NC_014124	Pseudomonas putida plasmid pDK1, complete sequence	93840-93873	8	0.765
NZ_CP019985_8	8.15\|2012460\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2012460-2012493	34	NC_019526	Enterobacteria phage vB_KleM-RaK2, complete genome	170444-170477	8	0.765
NZ_CP019985_8	8.15\|2012460\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2012460-2012493	34	AB897757	Klebsiella phage K64-1 DNA, complete genome	170400-170433	8	0.765
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	NZ_CP040366	Bacillus flexus isolate 1-2-1 plasmid punnamed3, complete sequence	75443-75476	8	0.765
NZ_CP019985_6	6.16\|2001039\|33\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001039-2001071	33	NC_015253	Brochothrix phage A9, complete genome	38213-38245	9	0.727
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NZ_CP042181	Pseudomonas sp. KBS0802 plasmid unnamed, complete sequence	41143-41176	9	0.735
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NC_003350	Pseudomonas putida plasmid pWW0, complete sequence	42871-42904	9	0.735
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NC_021250	Pseudomonas migulae strain D2RT plasmid pD2RT, complete sequence	111715-111748	9	0.735
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NC_008275	Pseudomonas putida MT53 plasmid pWW53, complete sequence	59049-59082	9	0.735
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	263758-263791	9	0.735
NZ_CP019985_6	6.20\|2001300\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001300-2001333	34	NZ_CP049029	Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence	54808-54841	9	0.735
NZ_CP019985_6	6.23\|2001497\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001497-2001530	34	NZ_CP031070	Bacillus sp. JAS24-2 plasmid pl278, complete sequence	202625-202658	9	0.735
NZ_CP019985_6	6.23\|2001497\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001497-2001530	34	HG796304	Uncultured bacterium plasmid pRGI00342	1222-1255	9	0.735
NZ_CP019985_6	6.25\|2001629\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001629-2001662	34	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	425152-425185	9	0.735
NZ_CP019985_6	6.25\|2001629\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001629-2001662	34	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	407913-407946	9	0.735
NZ_CP019985_6	6.25\|2001629\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001629-2001662	34	NZ_CP032692	Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence	189651-189684	9	0.735
NZ_CP019985_6	6.25\|2001629\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001629-2001662	34	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	382348-382381	9	0.735
NZ_CP019985_7	7.12\|2004192\|35\|NZ_CP019985\|CRISPRCasFinder	2004192-2004226	35	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	229439-229473	9	0.743
NZ_CP019985_7	7.12\|2004192\|35\|NZ_CP019985\|CRISPRCasFinder	2004192-2004226	35	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	83313-83347	9	0.743
NZ_CP019985_7	7.12\|2004192\|35\|NZ_CP019985\|CRISPRCasFinder	2004192-2004226	35	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	144450-144484	9	0.743
NZ_CP019985_7	7.12\|2004192\|35\|NZ_CP019985\|CRISPRCasFinder	2004192-2004226	35	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	271586-271620	9	0.743
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	MK250029	Prevotella phage Lak-C1, complete genome	318374-318407	9	0.735
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	MK250016	Prevotella phage Lak-A1, complete genome	353156-353189	9	0.735
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	MK250019	Prevotella phage Lak-A2, complete genome	272679-272712	9	0.735
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	426037-426070	9	0.735
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	115221-115254	9	0.735
NZ_CP019985_10	10.4\|2019702\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2019702-2019735	34	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	238676-238709	9	0.735
NZ_CP019985_10	10.10\|2020096\|33\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2020096-2020128	33	NZ_CP009218	Rickettsiales bacterium Ac37b plasmid 1, complete sequence	2522-2554	9	0.727
NZ_CP019985_10	10.11\|2020161\|35\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2020161-2020195	35	MK448353	Streptococcus satellite phage Javan195, complete genome	13507-13541	9	0.743
NZ_CP019985_10	10.11\|2020161\|35\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2020161-2020195	35	MK448352	Streptococcus satellite phage Javan194, complete genome	13507-13541	9	0.743
NZ_CP019985_10	10.11\|2020161\|35\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2020161-2020195	35	MK448351	Streptococcus satellite phage Javan193, complete genome	13507-13541	9	0.743
NZ_CP019985_6	6.10\|2000642\|33\|NZ_CP019985\|CRISPRCasFinder,CRT	2000642-2000674	33	NZ_MK167987	Klebsiella pneumoniae strain 6BS12CTX plasmid pHNBS12, complete sequence	137950-137982	10	0.697
NZ_CP019985_6	6.10\|2000642\|33\|NZ_CP019985\|CRISPRCasFinder,CRT	2000642-2000674	33	NZ_MK167989	Klebsiella pneumoniae strain 6YF2CTX plasmid pHNYF2-1, complete sequence	99476-99508	10	0.697
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	MT310862	Streptomyces phage Itza, complete genome	39724-39757	10	0.706
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	MN062705	Streptomyces phage Celia, complete genome	39791-39824	10	0.706
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	MN234189	Streptomyces phage Urza, complete genome	39745-39778	10	0.706
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NZ_CP040761	Paracoccus sp. 2251 plasmid unnamed5, complete sequence	136414-136447	10	0.706
NZ_CP019985_6	6.19\|2001234\|34\|NZ_CP019985\|CRISPRCasFinder,CRT,PILER-CR	2001234-2001267	34	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	508770-508803	10	0.706
NZ_CP019985_7	7.2\|2003525\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2003525-2003558	34	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	230885-230918	10	0.706
NZ_CP019985_8	8.16\|2012526\|33\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	2012526-2012558	33	KX119188	Helicobacter phage FrB41M, complete genome	942-974	10	0.697
NZ_CP019985_9	9.6\|2016976\|35\|NZ_CP019985\|CRISPRCasFinder,CRT	2016976-2017010	35	KF669662	Bacillus phage Spock, complete genome	94686-94720	10	0.714
NZ_CP019985_9	9.6\|2016976\|35\|NZ_CP019985\|CRISPRCasFinder,CRT	2016976-2017010	35	KY888882	Bacillus phage Flapjack, complete genome	94952-94986	10	0.714
NZ_CP019985_3	3.4\|1877427\|34\|NZ_CP019985\|PILER-CR,CRISPRCasFinder,CRT	1877427-1877460	34	NZ_AP017962	Synechococcus sp. NIES-970 plasmid plasmid3 DNA, complete sequence	19299-19332	11	0.676

1. spacer 6.30|2001955|35|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012476 (Bacillus clausii strain ENTPro plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

acaaaagactagcaacagtgtcacagacagaaacg	CRISPR spacer
acaaaagactagcaacagtgtcacagacagaaacg	Protospacer
***********************************

2. spacer 6.31|2002022|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012476 (Bacillus clausii strain ENTPro plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

tctggtcgtttcaacgccttcaggggggtttcat	CRISPR spacer
tctggtcgtttcaacgccttcaggggggtttcat	Protospacer
**********************************

3. spacer 7.11|2004128|32|NZ_CP019985|CRISPRCasFinder matches to NZ_CP012476 (Bacillus clausii strain ENTPro plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

aaataaatggcccgcacaccaagtcaacagcg	CRISPR spacer
aaataaatggcccgcacaccaagtcaacagcg	Protospacer
********************************

4. spacer 7.13|2004128|34|NZ_CP019985|CRT matches to NZ_CP012476 (Bacillus clausii strain ENTPro plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

aaataaatggcccgcacaccaagtcaacagcgcc	CRISPR spacer
aaataaatggcccgcacaccaagtcaacagcgcc	Protospacer
**********************************

5. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT366947 (Bacillus phage Hyb2phi3Ts-SPbeta, complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

6. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY030782 (Bacillus phage phi3T, complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

7. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

8. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

9. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT366946 (Bacillus phage Hyb1phi3Ts-SPbeta, complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

10. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT366948 (Bacillus phage Hyb3phi3Ts-SPbeta, complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

11. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT366945 (Bacillus phage phi3Ts, complete genome) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

12. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035407 (Bacillus subtilis strain SRCM103612 plasmid unnamed1) position: , mismatch: 1, identity: 0.97

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cgtttcgatttaaggggttctcacccacgccaa	Protospacer
****************.****************

13. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031073 (Bacillus mycoides strain BPN401 plasmid pl50, complete sequence) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgagaaagggtgttcattattggacatcttagag	Protospacer
**.*****************.*************

14. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK449000 (Streptococcus phage Javan64, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

15. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN689516 (Lactococcus phage CHPC148, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgagagagggtgttcattatcggacatcttagag	Protospacer
**.**.****************************

16. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_004746 (Lactococcus phage 4268, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgagagagggtgttcattatcggacatcttagag	Protospacer
**.**.****************************

17. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to HB961993 (Sequence 94668 from Patent EP2096177) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

18. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK448917 (Streptococcus phage Javan362, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

19. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK448831 (Streptococcus phage Javan83, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

20. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065487 (Streptococcus phage IPP48, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

21. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to HD019403 (Sequence 94668 from Patent EP2199304) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

22. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to AF489521 (Lactococcus bacteriophage 4268, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgagagagggtgttcattatcggacatcttagag	Protospacer
**.**.****************************

23. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK449006 (Streptococcus phage Javan78, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

24. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065500 (Streptococcus phage IPP64, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

25. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MH674343 (Methanobacterium virus Drs3, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaaagggtgttcattgtcggacatcttggag	Protospacer
******************.***********.***

26. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to HB955207 (Sequence 87882 from Patent EP2096177) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

27. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065491 (Streptococcus phage IPP53, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

28. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to HD012617 (Sequence 87882 from Patent EP2199304) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

29. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to DQ113772 (Streptococcus pneumoniae bacteriophage MM1 1998, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

30. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to AJ302074 (Streptococcus pneumoniae bacteriophage MM1 complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

31. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_031907 (Streptococcus phage phiARI0746, complete genome) position: , mismatch: 2, identity: 0.941

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgtgtgttcattatcggacatcttagag	Protospacer
****** * *************************

32. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065462 (Streptococcus phage IPP21, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

33. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065471 (Streptococcus phage IPP30, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

34. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065461 (Streptococcus phage IPP20, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

35. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065470 (Streptococcus phage IPP29, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

36. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065453 (Streptococcus phage IPP11, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

37. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065498 (Streptococcus phage IPP62, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

38. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY065459 (Streptococcus phage IPP18, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

39. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to FR671409 (Streptococcus phage 11865) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

40. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_030946 (Streptococcus phage phiARI0923, complete genome) position: , mismatch: 3, identity: 0.912

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
cgggaacgagtgttcattatcggacatcttagaa	Protospacer
****** *.************************.

41. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK584893 (Staphylococcus phage vBSM-A1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

42. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN539738 (UNVERIFIED: Staphylococcus phage vB_SauM-D, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

43. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080600 (UNVERIFIED: Staphylococcus phage vB_SauM_EW71, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

44. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
tgtttccatttaagggattctcacccactccaa	Protospacer
.***** ********************* ****

45. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattctcacccactccaa	Protospacer
*.**** ********************* ****

46. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattctcacccactccaa	Protospacer
*.**** ********************* ****

47. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to EF136587 (Staphylococcus phage 812 strain phi812 putative holin, endolysin (lyt812), and putative HNH endonuclease (lyt812) genes, complete cds) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

48. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_047721 (Staphylococcus phage SA5, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

49. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080586 (UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

50. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080586 (UNVERIFIED: Staphylococcus phage vB_SauM_EW2, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

51. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK656892 (Staphylococcus phage vBSP-A20, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

52. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080594 (UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

53. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080594 (UNVERIFIED: Staphylococcus phage vB_SauM_EW4, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

54. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KR908644 (Staphylococcus phage IME-SA119, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

55. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080582 (UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

56. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080582 (UNVERIFIED: Staphylococcus phage vB_SauM_EW1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

57. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
tgtttccatttaagggattctcacccactccaa	Protospacer
.***** ********************* ****

58. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattctcacccactccaa	Protospacer
*.**** ********************* ****

59. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattctcacccactccaa	Protospacer
*.**** ********************* ****

60. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN539736 (UNVERIFIED: Staphylococcus phage vB_SauM-A, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

61. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY581279 (Staphylococcus phage pSa-3, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

62. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK417514 (Staphylococcus virus Sa83, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

63. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN336263 (Staphylococcus phage Sb1M_9832, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

64. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN336262 (Staphylococcus phage Sb1M_6168, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

65. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to AY954969 (Bacteriophage G1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

66. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK331931 (Staphylococcus phage Sa30, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

67. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to JX080302 (Staphylococcus phage 676Z, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

68. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN047438 (Staphylococcus phage vB_SauM-515A1) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

69. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MF405094 (Staphylococcus phage JA1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

70. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN336261 (Staphylococcus phage Sb1_8383, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

71. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN539737 (UNVERIFIED: Staphylococcus phage vB_SauM-C, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

72. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to EU418428 (Staphylococcus phage A5W, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

73. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KP687431 (Staphylococcus phage IME-SA1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

74. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK417516 (Staphylococcus virus J-Sa36, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

75. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT080602 (UNVERIFIED: Staphylococcus phage vB_SauM_EW74, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

76. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KJ206561 (Staphylococcus phage 812 isolate host-range mutant K1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

77. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KP687432 (Staphylococcus phage IME-SA2, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

78. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_047722 (Staphylococcus phage Staph1N, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

79. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_047723 (Staphylococcus phage A3R, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

80. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_047720 (Staphylococcus phage ISP complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

81. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to JX080303 (Staphylococcus phage Fi200W, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

82. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MG656408 (Staphylococcus phage B1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

83. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KF766114 (Staphylococcus phage K, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

84. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KR902361 (Staphylococcus phage IME-SA118, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

85. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MH844529 (Staphylococcus phage 812h1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

86. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KC012913 (Staphylococcus phage Team1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

87. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK331930 (Staphylococcus phage CH1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

88. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to JX080305 (Staphylococcus phage P4W, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

89. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KJ206560 (Staphylococcus phage 812 isolate host-range mutant 812a, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

90. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MF398190 (Staphylococcus phage vB_SauM-fRuSau02, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

91. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK417515 (Staphylococcus virus Sa87, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

92. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MH844528 (Staphylococcus phage 812, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

93. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_007066 (Staphylococcus phage G1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

94. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to JX080304 (Staphylococcus phage MSA6, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

95. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MH136584 (Staphylococcus phage HYZ21, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

96. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_023009 (Staphylococcus phage Sb-1, complete genome) position: , mismatch: 3, identity: 0.909

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaagggattctcacccactccat	Protospacer
*.************************** ***

97. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY705255 (Streptococcus phage P0095, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

98. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY705251 (Streptococcus phage P0091, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

99. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KX879643 (Streptococcus phage CHPC1151, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

100. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK448735 (Streptococcus phage Javan349, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgggtgttcattgtcggacatcttagag	Protospacer
 *.*** ***********.***************

101. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK202161 (Streptococcus phage CHPC1282, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

102. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY705252 (Streptococcus phage P0092, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

103. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MH937506 (Streptococcus phage CHPC1148, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

104. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY705253 (Streptococcus phage P0093, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

105. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KY705254 (Streptococcus phage P0094, complete genome) position: , mismatch: 4, identity: 0.882

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagaacgagtgttcattatcggacatcttagag	Protospacer
 *.*** *.*************************

106. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to LC557520 (Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome) position: , mismatch: 4, identity: 0.879

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
cttttcgatttaagggattttcacccactccat	Protospacer
* *****************.******** ***

107. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK448806 (Streptococcus phage Javan565, complete genome) position: , mismatch: 5, identity: 0.853

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgggtgtttattatcggacatcttagag	Protospacer
 *.**. *******.*******************

108. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK448990 (Streptococcus phage Javan584, complete genome) position: , mismatch: 5, identity: 0.853

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgggtgtttattatcggacatcttagag	Protospacer
 *.**. *******.*******************

109. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to KX077891 (Streptococcus phage phiJH1301-1, complete genome) position: , mismatch: 5, identity: 0.853

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgggtgtttattatcggacatcttagag	Protospacer
 *.**. *******.*******************

110. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MK448812 (Streptococcus phage Javan577, complete genome) position: , mismatch: 5, identity: 0.853

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgggtgtttattatcggacatcttagag	Protospacer
 *.**. *******.*******************

111. spacer 7.11|2004128|32|NZ_CP019985|CRISPRCasFinder matches to KC139511 (Salmonella phage FSL SP-101, partial genome) position: , mismatch: 6, identity: 0.812

aaataaatggcccgcacaccaag-tcaacagcg	CRISPR spacer
aaataaatgtcgcgcacaccaagaacaaaaac-	Protospacer
********* * ***********  *** *.*

112. spacer 3.11|1877893|35|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.8

tcgaaaatggcggcgacttgcgccacttgcagaag	CRISPR spacer
tcgctcatgccgacgacttgcgccacttgcatcag	Protospacer
***   *** **.******************  **

113. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgtgtatttattatcggacatcttagag	Protospacer
 *.**. * **.**.*******************

114. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgtgtatttattatcggacatcttagag	Protospacer
 *.**. * **.**.*******************

115. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgtgtatttattatcggacatcttagag	Protospacer
 *.**. * **.**.*******************

116. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgtgtatttattatcggacatcttagag	Protospacer
 *.**. * **.**.*******************

117. spacer 6.11|2000707|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033741 (Enterococcus sp. FDAARGOS_553 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

cgggaaagggtgttcattatcggacatcttagag	CRISPR spacer
agagagcgtgtatttattatcggacatcttagag	Protospacer
 *.**. * **.**.*******************

118. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_049350 (Vibrio phage VCO139, complete genome) position: , mismatch: 7, identity: 0.788

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattttcacccactcact	Protospacer
*.**** ************.******** *

119. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_021540 (Vibrio phage JA-1, complete genome) position: , mismatch: 7, identity: 0.788

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattttcacccactcact	Protospacer
*.**** ************.******** *

120. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_049380 (Vibrio phage JSF3, complete genome) position: , mismatch: 7, identity: 0.788

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttccatttaagggattttcacccactcact	Protospacer
*.**** ************.******** *

121. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 7, identity: 0.788

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
catttcgatttaaaggattctcacctacttaat	Protospacer
*.***********.***********.** . *

122. spacer 7.14|2004194|33|NZ_CP019985|CRT matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
atagattctagtgcagcaaaataaattgtgcta	Protospacer
***.   **************.*.********.

123. spacer 7.14|2004194|33|NZ_CP019985|CRT matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
atagattctagtgcagcaaaataaattgtgcta	Protospacer
***.   **************.*.********.

124. spacer 7.14|2004194|33|NZ_CP019985|CRT matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 7, identity: 0.788

ataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
atagattctagtgcagcaaaataaattgtgcta	Protospacer
***.   **************.*.********.

125. spacer 7.14|2004194|33|NZ_CP019985|CRT matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 7, identity: 0.788

ataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
atagattctagtgcagcaaaataaattgtgcta	Protospacer
***.   **************.*.********.

126. spacer 8.10|2012129|33|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.788

taaccgc----gggcatggagatcgtgcacacgctca	CRISPR spacer
----cgcaacggggcaaggagatcctgcacacgctct	Protospacer
    ***    ***** ******* ***********

127. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_014124 (Pseudomonas putida plasmid pDK1, complete sequence) position: , mismatch: 8, identity: 0.765

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
ctcgcgcatggccggccgcagcttgcgcgccagc	Protospacer
* ***** ***************.**** *.

128. spacer 8.15|2012460|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 8, identity: 0.765

ggcatgcc---tacgtctccttgtacagtatcaagca	CRISPR spacer
---ctacctgatacgtgttcttgtacagtatcaagta	Protospacer
    *.**   ***** *.****************.*

129. spacer 8.15|2012460|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

ggcatgcc---tacgtctccttgtacagtatcaagca	CRISPR spacer
---ctacctgatacgtgttcttgtacagtatcaagta	Protospacer
    *.**   ***** *.****************.*

130. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040366 (Bacillus flexus isolate 1-2-1 plasmid punnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

tctcctattatttttttattaatctacttatcat	CRISPR spacer
tttaattcaatttttttattaatttacttattat	Protospacer
*.*  * . **************.*******.**

131. spacer 6.16|2001039|33|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 9, identity: 0.727

cgtttcgatttaagggattctcacccacgccaa	CRISPR spacer
tacttcgatttaaggggctctcacccactacct	Protospacer
...*************..**********  *

132. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042181 (Pseudomonas sp. KBS0802 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
ctcgcgcatggccggccgcagcttgcgtgccagc	Protospacer
* ***** ***************.***. *.

133. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_003350 (Pseudomonas putida plasmid pWW0, complete sequence) position: , mismatch: 9, identity: 0.735

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
ctcgcgcatggccggccgcagcttgcgtgccagc	Protospacer
* ***** ***************.***. *.

134. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_021250 (Pseudomonas migulae strain D2RT plasmid pD2RT, complete sequence) position: , mismatch: 9, identity: 0.735

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
ctcgcgcatggccggccgcagcttgcgtgccagc	Protospacer
* ***** ***************.***. *.

135. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_008275 (Pseudomonas putida MT53 plasmid pWW53, complete sequence) position: , mismatch: 9, identity: 0.735

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
ctcgcgcatggccggccgcagcttgcgtgccagc	Protospacer
* ***** ***************.***. *.

136. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 9, identity: 0.735

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
atcgcgcttggccggctgcggctcgcctttgccg	Protospacer
  **************.**.****** ... ***

137. spacer 6.20|2001300|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049029 (Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence) position: , mismatch: 9, identity: 0.735

aaaaatcggaggccgttccgttgatcgtctcagc	CRISPR spacer
cgcgataaaaggccgttccggtgaccgtctcagc	Protospacer
 . .** ..*********** ***.*********

138. spacer 6.23|2001497|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031070 (Bacillus sp. JAS24-2 plasmid pl278, complete sequence) position: , mismatch: 9, identity: 0.735

tctttacaagtttgtttttattgagtg----cttgtgg	CRISPR spacer
ttgttacaagtatgtctttattgagtgaacccct----	Protospacer
*. ******** ***.***********    *.*

139. spacer 6.23|2001497|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to HG796304 (Uncultured bacterium plasmid pRGI00342) position: , mismatch: 9, identity: 0.735

tctttacaa-----gtttgtttttattgagtgcttgtgg	CRISPR spacer
-----agaacaggtgtttttttttattgagttcttgtgt	Protospacer
     * **     **** ************ ******

140. spacer 6.25|2001629|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 9, identity: 0.735

gcggaggaaggggacgtcatcgaacttgaggcgc	CRISPR spacer
attgtcgatcgggacgtcatcgatcttgagccgc	Protospacer
.. *  **  ************* ****** ***

141. spacer 6.25|2001629|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 9, identity: 0.735

gcggaggaaggggacgtcatcgaacttgaggcgc	CRISPR spacer
attgtcgatcgggacgtcatcgatcttgagccgc	Protospacer
.. *  **  ************* ****** ***

142. spacer 6.25|2001629|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032692 (Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence) position: , mismatch: 9, identity: 0.735

gcggaggaaggggacgtcatcgaacttgaggcgc	CRISPR spacer
attgtcgatcgggacgtcatcgatcttgagccgc	Protospacer
.. *  **  ************* ****** ***

143. spacer 6.25|2001629|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 9, identity: 0.735

gcggaggaaggggacgtcatcgaacttgaggcgc	CRISPR spacer
tcggaggaagtgaacgtcatcgaacgcgaacccg	Protospacer
 ********* *.************ .**. *

144. spacer 7.12|2004192|35|NZ_CP019985|CRISPRCasFinder matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

acataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
caatagattctagtgcagcaaaataaattgtgcta	Protospacer
  ***.   **************.*.********.

145. spacer 7.12|2004192|35|NZ_CP019985|CRISPRCasFinder matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

acataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
caatagattctagtgcagcaaaataaattgtgcta	Protospacer
  ***.   **************.*.********.

146. spacer 7.12|2004192|35|NZ_CP019985|CRISPRCasFinder matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 9, identity: 0.743

acataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
caatagattctagtgcagcaaaataaattgtgcta	Protospacer
  ***.   **************.*.********.

147. spacer 7.12|2004192|35|NZ_CP019985|CRISPRCasFinder matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 9, identity: 0.743

acataacagctagtgcagcaaaacagattgtgctg	CRISPR spacer
caatagattctagtgcagcaaaataaattgtgcta	Protospacer
  ***.   **************.*.********.

148. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.735

tctcctattatttttttattaatctacttatcat	CRISPR spacer
aaccacaaaatttttttcttaatctacttttcat	Protospacer
  .* .*  ******** *********** ****

149. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.735

tctcctattatttttttattaatctacttatcat	CRISPR spacer
aaccacaaaatttttttcttaatctacttttcat	Protospacer
  .* .*  ******** *********** ****

150. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.735

tctcctattatttttttattaatctacttatcat	CRISPR spacer
aaccacaaaatttttttcttaatctacttttcat	Protospacer
  .* .*  ******** *********** ****

151. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.735

tctcctattatttttttattaatctacttatcat	CRISPR spacer
aataacatcatttttttcttaatctacttaatat	Protospacer
  *  .**.******** ************ .**

152. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.735

tctcctattatttttttattaatctacttatcat	CRISPR spacer
aataacatcatttttttcttaatctacttaatat	Protospacer
  *  .**.******** ************ .**

153. spacer 10.4|2019702|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 9, identity: 0.735

tctcctattatttttttattaatctacttatcat	CRISPR spacer
aataacatcatttttttcttaatctacttaatat	Protospacer
  *  .**.******** ************ .**

154. spacer 10.10|2020096|33|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009218 (Rickettsiales bacterium Ac37b plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

agcatatcttcaacagattttcgaagcgtcatc	CRISPR spacer
cagaaatcttcaacagattttgcaagcgtacgc	Protospacer
 . * ****************  ******   *

155. spacer 10.11|2020161|35|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to MK448353 (Streptococcus satellite phage Javan195, complete genome) position: , mismatch: 9, identity: 0.743

aagagaggaaaacactgaaaaagaaaaaggggatg	CRISPR spacer
aatggaggaaaagactgaaaaagaacaagaaatag	Protospacer
** .******** ************ ***...  *

156. spacer 10.11|2020161|35|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to MK448352 (Streptococcus satellite phage Javan194, complete genome) position: , mismatch: 9, identity: 0.743

aagagaggaaaacactgaaaaagaaaaaggggatg	CRISPR spacer
aatggaggaaaagactgaaaaagaacaagaaatag	Protospacer
** .******** ************ ***...  *

157. spacer 10.11|2020161|35|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to MK448351 (Streptococcus satellite phage Javan193, complete genome) position: , mismatch: 9, identity: 0.743

aagagaggaaaacactgaaaaagaaaaaggggatg	CRISPR spacer
aatggaggaaaagactgaaaaagaacaagaaatag	Protospacer
** .******** ************ ***...  *

158. spacer 6.10|2000642|33|NZ_CP019985|CRISPRCasFinder,CRT matches to NZ_MK167987 (Klebsiella pneumoniae strain 6BS12CTX plasmid pHNBS12, complete sequence) position: , mismatch: 10, identity: 0.697

attcagaattatgtcagtatatccaacaactac	CRISPR spacer
gaatcgaattatgtcaatatatgcaacaattta	Protospacer
.  . ***********.***** ******.*

159. spacer 6.10|2000642|33|NZ_CP019985|CRISPRCasFinder,CRT matches to NZ_MK167989 (Klebsiella pneumoniae strain 6YF2CTX plasmid pHNYF2-1, complete sequence) position: , mismatch: 10, identity: 0.697

attcagaattatgtcagtatatccaacaactac	CRISPR spacer
gaatcgaattatgtcaatatatgcaacaattta	Protospacer
.  . ***********.***** ******.*

160. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MT310862 (Streptomyces phage Itza, complete genome) position: , mismatch: 10, identity: 0.706

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
cgcgcacttggccgcccgcagctcgtcggtcgag	Protospacer
*****.******** **********.   ..  *

161. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN062705 (Streptomyces phage Celia, complete genome) position: , mismatch: 10, identity: 0.706

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
cgcgcacttggccgcccgcagctcgtcggtcgag	Protospacer
*****.******** **********.   ..  *

162. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to MN234189 (Streptomyces phage Urza, complete genome) position: , mismatch: 10, identity: 0.706

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
cgcgcacttggccgcccgcagctcgtcggtcgag	Protospacer
*****.******** **********.   ..  *

163. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040761 (Paracoccus sp. 2251 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.706

cgcgcgcttggccggccgcagctcgcgccctccg	CRISPR spacer
gatgcgcttggccggccgctgctcgtgcggatca	Protospacer
 ..**************** *****.**   .*.

164. spacer 6.19|2001234|34|NZ_CP019985|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 10, identity: 0.706

cgcgcgcttggccggccgcagctcgc-----gccctccg	CRISPR spacer
gacgcgcttgcccggccgcagcgcgctgatggtc-----	Protospacer
 .******** *********** ***     *.*

165. spacer 7.2|2003525|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 10, identity: 0.706

gcgagttccatcgaacgcctcagcgaatggtaat	CRISPR spacer
ccctgatcgatcgaacgcctcagccaatggcctg	Protospacer
 *  * ** *************** *****.

166. spacer 8.16|2012526|33|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to KX119188 (Helicobacter phage FrB41M, complete genome) position: , mismatch: 10, identity: 0.697

gaggaaatcaataacgctccacaaacgttttct	CRISPR spacer
ttcaaaatcaatatcgctccacaaaagtgctaa	Protospacer
   .********* *********** ** .*

167. spacer 9.6|2016976|35|NZ_CP019985|CRISPRCasFinder,CRT matches to KF669662 (Bacillus phage Spock, complete genome) position: , mismatch: 10, identity: 0.714

tcaacgtagtcatggaactctgcaaacgtcgtagc	CRISPR spacer
tcagcgtagtcatggtactctgcaactgataatgt	Protospacer
***.*********** ********* .* ..  *.

168. spacer 9.6|2016976|35|NZ_CP019985|CRISPRCasFinder,CRT matches to KY888882 (Bacillus phage Flapjack, complete genome) position: , mismatch: 10, identity: 0.714

tcaacgtagtcatggaactctgcaaacgtcgtagc	CRISPR spacer
tcagcgtagtcatggtactctgcaactgataatgt	Protospacer
***.*********** ********* .* ..  *.

169. spacer 3.4|1877427|34|NZ_CP019985|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017962 (Synechococcus sp. NIES-970 plasmid plasmid3 DNA, complete sequence) position: , mismatch: 11, identity: 0.676

agcccctatatcgtcaaggaccaataaatcacaa	CRISPR spacer
agcccctatatcctcaaggaacaacgggcggcgg	Protospacer
************ ******* ***..... .*..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

188244 : 197982

Synechococcus_phage(25.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094423539.1\|188244_189780_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	6.9e-75	51.0
WP_035204825.1\|189776_190361_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.2e-25	36.4
WP_094423540.1\|190357_191395_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	6.1e-67	43.6
WP_094423541.1\|191418_192831_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.9e-50	34.2
WP_094423542.1\|192806_195032_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.7e-163	43.3
WP_094423543.1\|195015_195699_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_011245883.1\|195695_195947_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A1D7SRI3	Cyanophage	2.1e-05	34.6
WP_094423544.1\|195939_196659_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SPE1	Cyanophage	2.8e-47	43.7
WP_094423545.1\|196683_197982_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	6.5e-18	24.9

DBSCAN-SWA_2

294946 : 356837

Bacillus_phage(29.41%)

integrase,holin,tail,transposase

attL 326206:326220|attR 342899:342913

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063609918.1\|294946_296218_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_094423626.1\|296522_296927_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_094423627.1\|297656_298505_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_094423628.1\|298799_299204_-	erythromycin esterase family protein	NA	NA	NA	NA
WP_094423629.1\|299397_300333_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_094423630.1\|300409_301423_+	hypothetical protein	NA	NA	NA	NA
WP_063608837.1\|303871_304306_-	hypothetical protein	NA	NA	NA	NA
WP_169715988.1\|304426_306484_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	80.3
WP_169715894.1\|306434_308660_+	YtxH domain-containing protein	A0A1S5SF30	Streptococcus_phage	2.6e-160	56.7
WP_169715989.1\|308668_309679_+	bifunctional lysozyme/C40 family peptidase	A0A1S5SEZ8	Streptococcus_phage	2.2e-130	68.2
WP_094423632.1\|309694_310582_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.2e-71	48.0
WP_017795862.1\|310598_310766_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_094423633.1\|311089_311842_+	alpha/beta hydrolase	A0A0S2MV32	Mycobacterium_phage	4.3e-06	31.3
WP_042532680.1\|314219_314825_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_094423634.1\|314921_315635_+	GAP family protein	NA	NA	NA	NA
WP_042532676.1\|315659_315881_+	hypothetical protein	NA	NA	NA	NA
WP_094423635.1\|315984_317136_+	acyltransferase family protein	NA	NA	NA	NA
WP_094423636.1\|318026_318281_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_063608852.1\|320763_321873_-	DUF418 domain-containing protein	NA	NA	NA	NA
WP_063608853.1\|321926_322601_-	hypothetical protein	NA	NA	NA	NA
WP_063608854.1\|322786_323383_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_094429137.1\|324066_324831_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.7e-40	37.9
WP_094429138.1\|324830_326375_-\|transposase	IS21 family transposase	NA	NA	NA	NA
326206:326220	attL	NA	NA	NA	NA
WP_094423637.1\|328396_330322_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_018705605.1\|330308_331076_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-31	35.0
WP_018705604.1\|331283_331955_+	response regulator transcription factor	W8CYM9	Bacillus_phage	9.8e-26	32.4
WP_077113179.1\|331951_332977_+	sensor histidine kinase	B5LWN0	Feldmannia_species_virus	2.7e-06	21.9
WP_018709270.1\|334236_334422_+	DUF3173 domain-containing protein	NA	NA	NA	NA
WP_088053189.1\|334460_335672_+\|integrase	site-specific integrase	A0A0S2MV79	Bacillus_phage	2.5e-43	32.9
WP_094423638.1\|335728_337276_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-21	31.4
WP_094423639.1\|337477_339688_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_062750332.1\|339677_340853_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_094429139.1\|340852_341809_-	MoxR family ATPase	NA	NA	NA	NA
WP_094423640.1\|341937_342438_-	thioredoxin family protein	NA	NA	NA	NA
WP_094423641.1\|342611_343556_+	metallophosphoesterase	NA	NA	NA	NA
342899:342913	attR	NA	NA	NA	NA
WP_062750335.1\|343641_343848_+	hypothetical protein	NA	NA	NA	NA
WP_062750336.1\|344409_344646_-	hypothetical protein	NA	NA	NA	NA
WP_169715895.1\|344710_346711_-	penicillin-binding transpeptidase domain-containing protein	NA	NA	NA	NA
WP_094423643.1\|347145_347634_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.1e-18	35.4
WP_169715896.1\|347812_348385_-	nitroreductase family protein	NA	NA	NA	NA
WP_094423645.1\|348470_349241_-	N-acetylmuramoyl-L-alanine amidase	A6XML1	Bacillus_virus	1.0e-55	53.5
WP_094423646.1\|349530_349959_-\|holin	phage holin family protein	U5PVI4	Bacillus_phage	8.1e-26	53.2
WP_094423647.1\|350056_350287_-	hypothetical protein	NA	NA	NA	NA
WP_169715897.1\|350288_354278_-\|tail	phage tail protein	Q5YA57	Bacillus_phage	3.5e-78	34.7
WP_157730324.1\|354295_355015_-\|tail	phage tail family protein	Q2I8E9	Bacillus_phage	3.5e-05	34.1
WP_094423650.1\|355031_356837_-	hypothetical protein	W8EBC4	Geobacillus_phage	3.5e-17	39.4

DBSCAN-SWA_3

3006069 : 3070424

Moraxella_phage(22.22%)

coat,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094426740.1\|3006069_3007020_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	4.4e-88	54.8
WP_094426742.1\|3007165_3008695_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_094426744.1\|3008827_3010327_-	glycosyltransferase family 2 protein	C1KFU0	Lactobacillus_virus	1.4e-67	34.0
WP_094426745.1\|3010579_3010990_-	hypothetical protein	NA	NA	NA	NA
WP_094426747.1\|3011283_3012948_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_094426749.1\|3013282_3015013_+	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.6e-62	28.8
WP_062749640.1\|3015009_3015528_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_011247486.1\|3015566_3016592_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_094426752.1\|3016578_3018123_+	2-isopropylmalate synthase	NA	NA	NA	NA
WP_094426754.1\|3018133_3019228_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_094426757.1\|3019244_3020657_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_094426759.1\|3020656_3021250_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_094426762.1\|3021519_3022578_+	hypothetical protein	NA	NA	NA	NA
WP_094426765.1\|3022687_3023992_+	trigger factor	NA	NA	NA	NA
WP_011247479.1\|3024336_3025608_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.5e-147	61.6
WP_094426767.1\|3025765_3027433_+\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	6.0e-24	28.0
WP_094426769.1\|3027641_3029969_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	8.8e-183	45.3
WP_094426771.1\|3029965_3030559_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_094426773.1\|3030765_3032130_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_094426775.1\|3032146_3032962_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_094426778.1\|3032973_3033909_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_094426780.1\|3033905_3034664_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_094426783.1\|3034660_3035638_+	porphobilinogen synthase	NA	NA	NA	NA
WP_094426786.1\|3035642_3036935_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_157730447.1\|3037163_3038303_+	stage VI sporulation protein D	NA	NA	NA	NA
WP_094426791.1\|3038310_3039189_+	hypothetical protein	NA	NA	NA	NA
WP_094426792.1\|3039185_3040184_+\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_094426794.1\|3040433_3041198_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_094426796.1\|3041147_3041360_-	hypothetical protein	NA	NA	NA	NA
WP_094426798.1\|3041773_3044416_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	1.6e-156	41.2
WP_094426801.1\|3044481_3045792_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_094426804.1\|3045937_3046657_+	prepilin peptidase	NA	NA	NA	NA
WP_094426806.1\|3046715_3047807_+	hypothetical protein	NA	NA	NA	NA
WP_094426808.1\|3047943_3049890_+	S9 family peptidase	NA	NA	NA	NA
WP_094426811.1\|3050169_3050745_+	septum formation protein Maf	NA	NA	NA	NA
WP_094426813.1\|3050758_3051451_+	DNA repair protein RadC	NA	NA	NA	NA
WP_062749586.1\|3051687_3052722_+	rod shape-determining protein	NA	NA	NA	NA
WP_094426816.1\|3052733_3053615_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_011247455.1\|3053611_3054136_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_063608457.1\|3054216_3054900_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_011247453.1\|3054929_3055724_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_094426819.1\|3055836_3056355_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_011247451.1\|3056399_3056846_-	molybdenum cofactor biosynthesis protein C	NA	NA	NA	NA
WP_094426822.1\|3057011_3057575_+	biotin transporter BioY	NA	NA	NA	NA
WP_094426824.1\|3057615_3058533_-	aldo/keto reductase	NA	NA	NA	NA
WP_157730448.1\|3058639_3059368_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_094426830.1\|3059360_3060206_+	M50 family metallopeptidase	NA	NA	NA	NA
WP_094426833.1\|3060266_3061760_+	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_011247445.1\|3061898_3062207_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_094426835.1\|3062212_3062551_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_011247443.1\|3062556_3062835_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_011247442.1\|3063060_3063351_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	1.5e-10	52.7
WP_094426837.1\|3063420_3064566_+	amidohydrolase	NA	NA	NA	NA
WP_157730449.1\|3064724_3064883_+	hypothetical protein	NA	NA	NA	NA
WP_094426839.1\|3064875_3065520_+	uracil-DNA glycosylase	NA	NA	NA	NA
WP_094426842.1\|3065573_3066695_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_094426843.1\|3066858_3067557_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_094426845.1\|3067616_3069092_+	amidase	NA	NA	NA	NA
WP_094426848.1\|3069213_3069690_+	DinB family protein	NA	NA	NA	NA
WP_094423643.1\|3069935_3070424_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.1e-18	35.4

DBSCAN-SWA_4

3206601 : 3249473

Bacillus_phage(52.94%)

terminase,holin,protease,portal,capsid,head,integrase,tail

attL 3206437:3206482|attR 3249593:3249638

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3206437:3206482	attL	NA	NA	NA	NA
WP_094427099.1\|3206601_3207561_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	1.4e-49	36.2
WP_169715953.1\|3207772_3207910_+	hypothetical protein	NA	NA	NA	NA
WP_094427102.1\|3208008_3208752_+	hypothetical protein	NA	NA	NA	NA
WP_094427104.1\|3208802_3209066_+	hypothetical protein	NA	NA	NA	NA
WP_169715954.1\|3209046_3209448_+	HNH endonuclease	A0A2H4J3B4	uncultured_Caudovirales_phage	1.6e-31	52.3
WP_011246179.1\|3209882_3210359_+\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	5.5e-23	39.7
WP_094427107.1\|3210355_3212050_+\|terminase	terminase large subunit	A6M948	Geobacillus_virus	1.3e-172	53.9
WP_094427109.1\|3212059_3212260_+	hypothetical protein	Q9ZXF9	Bacillus_phage	4.5e-11	68.5
WP_094427112.1\|3212265_3213555_+\|portal	phage portal protein	D6R3Y6	Bacillus_phage	2.9e-151	63.0
WP_094427114.1\|3213511_3214144_+\|head,protease	HK97 family phage prohead protease	Q9ZXF7	Bacillus_phage	2.9e-72	67.8
WP_094427116.1\|3214184_3215432_+\|capsid	phage major capsid protein	A0A0A7RTL2	Clostridium_phage	1.2e-88	46.3
WP_157730463.1\|3215516_3216002_+	Ig-like domain-containing protein	A0A0S2MY17	Enterococcus_phage	4.2e-10	37.1
WP_094427120.1\|3215994_3216291_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J6E5	uncultured_Caudovirales_phage	3.7e-09	44.2
WP_169715955.1\|3216268_3216622_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_094427123.1\|3216626_3217031_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_094427125.1\|3217027_3217387_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_157730465.1\|3217399_3218011_+	hypothetical protein	A0A0S2SXT6	Bacillus_phage	1.6e-22	34.2
WP_094427131.1\|3218151_3218502_+	hypothetical protein	NA	NA	NA	NA
WP_094427134.1\|3218516_3218747_+	hypothetical protein	NA	NA	NA	NA
WP_094427136.1\|3218764_3223447_+\|tail	phage tail tape measure protein	A0A0C5AJ16	Paenibacillus_phage	6.7e-97	47.5
WP_157730466.1\|3223448_3224288_+\|tail	phage tail family protein	A6M962	Geobacillus_virus	1.0e-32	34.4
WP_094427141.1\|3224311_3226963_+	peptidase G2	D6R401	Bacillus_phage	1.4e-139	36.6
WP_094427143.1\|3229259_3229634_+	hypothetical protein	NA	NA	NA	NA
WP_094427145.1\|3229626_3229797_+	XkdX family protein	A0A142F1G4	Bacillus_phage	9.1e-13	68.0
WP_094427147.1\|3229860_3230499_+	hypothetical protein	NA	NA	NA	NA
WP_094427149.1\|3230502_3231894_+\|tail	phage tail protein	NA	NA	NA	NA
WP_094427151.1\|3231930_3232341_+\|holin	phage holin family protein	D6R405	Bacillus_phage	1.1e-30	52.7
WP_094427153.1\|3232343_3233231_+	N-acetylmuramoyl-L-alanine amidase	A0A0A7RTQ5	Clostridium_phage	4.2e-24	37.9
WP_094427156.1\|3233266_3233695_-	hypothetical protein	NA	NA	NA	NA
WP_157730467.1\|3234046_3234880_-	hypothetical protein	O64130	Bacillus_phage	4.6e-65	48.4
WP_094429270.1\|3234936_3235299_-	YolD-like family protein	NA	NA	NA	NA
WP_094427160.1\|3235420_3235615_-	hypothetical protein	A0A2H4J069	uncultured_Caudovirales_phage	2.4e-09	62.7
WP_094427161.1\|3236011_3236788_-	hypothetical protein	NA	NA	NA	NA
WP_041823719.1\|3236937_3237390_-	ImmA/IrrE family metallo-endopeptidase	R9TQI1	Paenibacillus_phage	3.4e-38	54.2
WP_041823722.1\|3237389_3237725_-	helix-turn-helix transcriptional regulator	Q8W5Y0	Listeria_phage	1.0e-15	41.9
WP_094427162.1\|3237989_3238163_+	helix-turn-helix domain-containing protein	A0A0M3ULF9	Bacillus_phage	7.6e-15	71.9
WP_094427164.1\|3238216_3238486_+	hypothetical protein	NA	NA	NA	NA
WP_094427166.1\|3238448_3238766_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	4.8e-15	49.0
WP_094427169.1\|3238828_3239611_+	phage antirepressor KilAC domain-containing protein	A8ATN0	Listeria_phage	4.2e-52	44.9
WP_094427172.1\|3239745_3240060_+	hypothetical protein	NA	NA	NA	NA
WP_094427174.1\|3240060_3240246_+	hypothetical protein	NA	NA	NA	NA
WP_169715956.1\|3240250_3240403_+	hypothetical protein	NA	NA	NA	NA
WP_094427176.1\|3240479_3241028_+	host-nuclease inhibitor Gam family protein	Q9ZXC8	Bacillus_phage	1.1e-46	53.3
WP_094427177.1\|3241037_3241991_+	AAA family ATPase	A0A0S2SY47	Bacillus_phage	2.1e-98	58.5
WP_094427179.1\|3242006_3242444_+	DUF669 domain-containing protein	Q9ZXC5	Bacillus_phage	2.0e-40	53.8
WP_094427181.1\|3242501_3244856_+	DNA primase	A0A0S2SXQ4	Bacillus_phage	1.5e-267	58.6
WP_094427183.1\|3245099_3245534_+	hypothetical protein	A0A0S2SXU2	Bacillus_phage	7.5e-19	38.1
WP_094427186.1\|3245537_3246068_+	ERCC4 domain-containing protein	A0A0S2SXQ1	Bacillus_phage	9.3e-64	68.0
WP_094427189.1\|3246064_3246337_+	hypothetical protein	NA	NA	NA	NA
WP_094427191.1\|3246339_3246690_+	DUF3310 domain-containing protein	A0A223LJ95	Bacillus_phage	3.9e-10	53.6
WP_094429271.1\|3246868_3247285_+	methyltransferase domain-containing protein	A0A059T693	Listeria_phage	5.1e-57	70.5
WP_094427193.1\|3247316_3247676_+	hypothetical protein	NA	NA	NA	NA
WP_094427195.1\|3247831_3248149_+	hypothetical protein	NA	NA	NA	NA
WP_094427197.1\|3248212_3248797_+	dUTP diphosphatase	R9TQ23	Paenibacillus_phage	1.6e-40	49.7
WP_094427199.1\|3248799_3249000_+	hypothetical protein	NA	NA	NA	NA
WP_094427202.1\|3249017_3249473_+	transcriptional regulator	A0A0S2SXN1	Bacillus_phage	1.9e-28	46.0
3249593:3249638	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019985

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection