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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017716 Lacticaseibacillus paracasei strain TK1501 chromosome, complete genome 4 crisprs DinG,WYL,DEDDh,csa3,cas3,RT,csn2,cas2,cas1,cas9 0 9 9 0

Results visualization

1. NZ_CP017716
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017716_1 274041-274185 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017716_2 664129-664261 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017716_3 1798581-1798701 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017716_4 2150702-2152321 TypeII NA
24 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP022955 Lactobacillus paracasei subsp. paracasei strain IBB3423 plasmid pLCAKO.1, complete sequence 5932-5961 1 0.967
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP022955 Lactobacillus paracasei subsp. paracasei strain IBB3423 plasmid pLCAKO.1, complete sequence 5932-5961 1 0.967
NZ_CP017716_4 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152058-2152087 30 CP000662 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence 787988-788017 6 0.8
NZ_CP017716_4 4.22|2152124|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152124-2152153 30 MT773556 Myoviridae sp. isolate BML_4 genomic sequence 200957-200986 6 0.8
NZ_CP017716_4 4.15|2151662|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151662-2151691 30 NZ_CP018229 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence 347900-347929 7 0.767
NZ_CP017716_4 4.15|2151662|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151662-2151691 30 NZ_CP016290 Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence 472321-472350 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP004875 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence 48588-48617 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NC_017202 Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence 107644-107673 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP011357 Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence 62912-62941 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP015155 Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence 77539-77568 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP013058 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence 26428-26457 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP007614 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence 33377-33406 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP004868 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence 60622-60651 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP010110 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence 26741-26770 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 CP020756 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence 95048-95077 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NC_020393 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence 82752-82781 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NZ_CP021063 Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence 43198-43227 7 0.767
NZ_CP017716_4 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151728-2151757 30 NC_020239 Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence 57384-57413 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP004875 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence 48588-48617 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NC_017202 Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence 107644-107673 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP011357 Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence 62912-62941 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP015155 Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence 77539-77568 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP013058 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence 26428-26457 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP007614 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence 33377-33406 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP004868 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence 60622-60651 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP010110 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence 26741-26770 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 CP020756 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence 95048-95077 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NC_020393 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence 82752-82781 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NZ_CP021063 Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence 43198-43227 7 0.767
NZ_CP017716_4 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151794-2151823 30 NC_020239 Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence 57384-57413 7 0.767
NZ_CP017716_4 4.20|2151992|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151992-2152021 30 MN693516 Marine virus AFVG_25M345, complete genome 20383-20412 7 0.767
NZ_CP017716_4 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152058-2152087 30 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 170192-170221 7 0.767
NZ_CP017716_4 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152058-2152087 30 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1643071-1643100 7 0.767
NZ_CP017716_4 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152058-2152087 30 MG757157 Gordonia phage Flapper, complete genome 3335-3364 7 0.767
NZ_CP017716_4 4.1|2150738|30|NZ_CP017716|CRISPRCasFinder,CRT 2150738-2150767 30 NZ_CP016024 Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence 227967-227996 8 0.733
NZ_CP017716_4 4.10|2151332|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151332-2151361 30 NZ_CP034227 Lactobacillus agilis strain La3 plasmid pLa3_2, complete sequence 3216-3245 8 0.733
NZ_CP017716_4 4.13|2151530|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151530-2151559 30 KY653117 Staphylococcus phage IME1323_01, complete genome 20139-20168 9 0.7
NZ_CP017716_4 4.15|2151662|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151662-2151691 30 NC_021920 Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence 44607-44636 9 0.7
NZ_CP017716_4 4.22|2152124|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152124-2152153 30 MN694055 Marine virus AFVG_250M1074, complete genome 14036-14065 9 0.7
NZ_CP017716_4 4.22|2152124|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2152124-2152153 30 MN693650 Marine virus AFVG_250M1058, complete genome 13744-13773 9 0.7
NZ_CP017716_4 4.10|2151332|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR 2151332-2151361 30 MN693950 Marine virus AFVG_250M300, complete genome 1356-1385 10 0.667

1. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022955 (Lactobacillus paracasei subsp. paracasei strain IBB3423 plasmid pLCAKO.1, complete sequence) position: , mismatch: 1, identity: 0.967

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
gctgaaccacgcctttgaacttttgttttt	Protospacer
************.*****************

2. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022955 (Lactobacillus paracasei subsp. paracasei strain IBB3423 plasmid pLCAKO.1, complete sequence) position: , mismatch: 1, identity: 0.967

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
gctgaaccacgcctttgaacttttgttttt	Protospacer
************.*****************

3. spacer 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 6, identity: 0.8

tgtgccgcatgttgaatccgtgccgactcg	CRISPR spacer
cgtgccgcatgttgaaccagtgccggattg	Protospacer
.***************.* ******. *.*

4. spacer 4.22|2152124|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 6, identity: 0.8

ggctgg--tcagtgctgatgacaaaacttaag	CRISPR spacer
--ctagtatcagttctgataacaaaacttaat	Protospacer
  **.*  ***** *****.*********** 

5. spacer 4.15|2151662|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttagcttgaatgaggttcgcgaacgtttag	CRISPR spacer
ttagcctgaatgatgttcgcgaagtcgaag	Protospacer
*****.******* *********  .  **

6. spacer 4.15|2151662|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016290 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

ttagcttgaatgaggttcgcgaacgtttag	CRISPR spacer
ttagcctgaatgatgttcgcgaagtcgaag	Protospacer
*****.******* *********  .  **

7. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

8. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

9. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

10. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

11. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

12. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007614 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

13. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004868 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

14. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

15. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

16. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_020393 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

17. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

18. spacer 4.16|2151728|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_020239 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

19. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004875 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB95, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

20. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

21. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011357 (Bacillus thuringiensis strain YC-10 plasmid pYC20, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

22. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015155 (Bacillus thuringiensis strain Bc601 plasmid pBTBC5, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

23. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013058 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-3, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

24. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007614 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB95, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

25. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP004868 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB94, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

26. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

27. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to CP020756 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-17, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

28. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_020393 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-107, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

29. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021063 (Bacillus thuringiensis strain ATCC 10792 plasmid poh2, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

30. spacer 4.17|2151794|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_020239 (Bacillus thuringiensis serovar kurstaki str. HD73 plasmid pHT77, complete sequence) position: , mismatch: 7, identity: 0.767

gctgaaccacgcttttgaacttttgttttt	CRISPR spacer
cctactctccgcttttgatcttttgttttt	Protospacer
 **.  *. ********* ***********

31. spacer 4.20|2151992|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to MN693516 (Marine virus AFVG_25M345, complete genome) position: , mismatch: 7, identity: 0.767

-gtgatgcaggctgtatgattttttttgtat	CRISPR spacer
cataac-caggctgtaagatattttttgtaa	Protospacer
 .*.*. ********* *** ********* 

32. spacer 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgccgcatgttgaatccgtgccgactcg	CRISPR spacer
cgtgccgcatgtcgaatccgcgccccgtgg	Protospacer
.***********.*******.***   * *

33. spacer 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgccgcatgttgaatccgtgccgactcg	CRISPR spacer
cgtgccgcatgtcgaatccgcgccccgtgg	Protospacer
.***********.*******.***   * *

34. spacer 4.21|2152058|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to MG757157 (Gordonia phage Flapper, complete genome) position: , mismatch: 7, identity: 0.767

tgtgccgcatgttgaatccgtgccgactcg	CRISPR spacer
cgacccgcacgttgaatccgtaccgacatg	Protospacer
.*  *****.***********.***** .*

35. spacer 4.1|2150738|30|NZ_CP017716|CRISPRCasFinder,CRT matches to NZ_CP016024 (Ralstonia insidiosa strain ATCC 49129 plasmid pRI-1, complete sequence) position: , mismatch: 8, identity: 0.733

cgcatatcactgagcatgtgcgagatcgtc	CRISPR spacer
cccataccactgagcatgtgcgaaaaacgg	Protospacer
* ****.****************.*     

36. spacer 4.10|2151332|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034227 (Lactobacillus agilis strain La3 plasmid pLa3_2, complete sequence) position: , mismatch: 8, identity: 0.733

aaggggcgtctttctttatatcatcggctt	CRISPR spacer
taggggcgtctttttttatatccgctcata	Protospacer
 ************.********  *   * 

37. spacer 4.13|2151530|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to KY653117 (Staphylococcus phage IME1323_01, complete genome) position: , mismatch: 9, identity: 0.7

cggggcaacatccacatctaagtctaacac	CRISPR spacer
tttggctacatcctcatctaagtctacatt	Protospacer
.  *** ****** ************   .

38. spacer 4.15|2151662|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to NC_021920 (Corynebacterium maris DSM 45190 plasmid pCmaris1, complete sequence) position: , mismatch: 9, identity: 0.7

ttagcttgaatgaggttcgcgaacgtttag	CRISPR spacer
gaagctcgagtgaggttcgcgaacgcggct	Protospacer
  ****.**.***************.    

39. spacer 4.22|2152124|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to MN694055 (Marine virus AFVG_250M1074, complete genome) position: , mismatch: 9, identity: 0.7

ggctggtcagtgctgatgacaaaacttaag	CRISPR spacer
catcggtcagtgctgatgaccaaacgtcca	Protospacer
 ...**************** **** *  .

40. spacer 4.22|2152124|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to MN693650 (Marine virus AFVG_250M1058, complete genome) position: , mismatch: 9, identity: 0.7

ggctggtcagtgctgatgacaaaacttaag	CRISPR spacer
catcggtcagtgctgatgacaacacgtcca	Protospacer
 ...****************** ** *  .

41. spacer 4.10|2151332|30|NZ_CP017716|CRISPRCasFinder,CRT,PILER-CR matches to MN693950 (Marine virus AFVG_250M300, complete genome) position: , mismatch: 10, identity: 0.667

aaggggcgtctttctttatatcatcggctt	CRISPR spacer
cttctttttctttctttttatcatcggctg	Protospacer
      . ********* *********** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 17813 : 52365 36 Faecalibacterium_phage(33.33%) bacteriocin,protease,transposase NA
DBSCAN-SWA_2 332075 : 463576 103 Lactobacillus_phage(26.67%) protease,transposase NA
DBSCAN-SWA_3 1045834 : 1100031 63 Lactobacillus_phage(69.23%) integrase,transposase attL 1053546:1053560|attR 1093596:1093610
DBSCAN-SWA_4 1103161 : 1126373 26 Lactobacillus_phage(62.5%) capsid,terminase,tail,portal,holin NA
DBSCAN-SWA_5 1906049 : 1979507 59 Burkholderia_virus(21.43%) protease,transposase NA
DBSCAN-SWA_6 1984897 : 2046103 41 Faecalibacterium_phage(18.18%) tRNA,protease,integrase,transposase attL 2043928:2043947|attR 2047309:2047328
DBSCAN-SWA_7 2279524 : 2396474 110 Streptococcus_phage(22.22%) bacteriocin,tRNA,protease,transposase NA
DBSCAN-SWA_8 2417333 : 2472810 74 Streptococcus_phage(52.63%) tRNA,integrase,transposase attL 2411328:2411347|attR 2444943:2444962
DBSCAN-SWA_9 2893626 : 2906395 17 Lactobacillus_phage(33.33%) capsid,terminase,head,tail,portal,integrase attL 2893510:2893529|attR 2908394:2908413
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage