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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP028389 Klebsiella pneumoniae strain WCHKP13F2 plasmid pKPC2_095132, complete sequence 0 crisprs RT 0 0 2 0
NZ_CP028391 Klebsiella pneumoniae strain WCHKP13F2 chromosome, complete genome 1 crisprs csa3,cas3,DEDDh,RT,DinG,WYL 0 0 6 0
NZ_CP028390 Klebsiella pneumoniae strain WCHKP13F2 plasmid pVir_095132, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP028391
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP028391_1 4307904-4308032 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 669543 : 707663 52 Salmonella_phage(83.33%) terminase,lysis,tail,tRNA,head,portal,plate,capsid,integrase attL 668122:668181|attR 701457:701526
DBSCAN-SWA_2 1666821 : 1673726 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_3 2782832 : 2793721 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_4 3177983 : 3273413 104 Klebsiella_phage(48.84%) terminase,tail,tRNA,head,holin,transposase,portal,capsid,integrase attL 3170513:3170530|attR 3281678:3281695
DBSCAN-SWA_5 3517851 : 3527315 9 Brazilian_cedratvirus(16.67%) tRNA,protease NA
DBSCAN-SWA_6 4009815 : 4054461 64 Escherichia_phage(26.53%) terminase,tRNA,head,holin,integrase attL 4004270:4004315|attR 4051534:4051579
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP028389
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2955 : 44785 55 Escherichia_phage(41.67%) integrase,transposase attL 2337:2350|attR 10357:10370
DBSCAN-SWA_2 49513 : 103213 65 Escherichia_phage(17.65%) integrase,transposase attL 57033:57073|attR 99232:99272
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP028390
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 155441 : 207437 50 Caulobacter_phage(15.0%) protease,transposase,integrase attL 161150:161165|attR 203543:203558
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage