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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015604 Actinobacteria bacterium IMCC26103 chromosome, complete genome 1 crisprs cas3,DEDDh,cas4,WYL,DinG 0 1 4 0

Results visualization

1. NZ_CP015604
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015604_1 563983-564288 Orphan NA
7 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP015604_1 1.2|564037|30|NZ_CP015604|CRT 564037-564066 30 MT408532 Synechococcus phage SynMITS9220M01, complete genome 117313-117342 5 0.833
NZ_CP015604_1 1.2|564037|30|NZ_CP015604|CRT 564037-564066 30 NZ_CP013981 Staphylococcus equorum strain KM1031 plasmid unnamed1, complete sequence 30222-30251 8 0.733
NZ_CP015604_1 1.2|564037|30|NZ_CP015604|CRT 564037-564066 30 NC_014390 Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence 97241-97270 9 0.7
NZ_CP015604_1 1.2|564037|30|NZ_CP015604|CRT 564037-564066 30 MK721189 Enterococcus phage vB_EfaS_Ef2.2, complete genome 27544-27573 9 0.7

1. spacer 1.2|564037|30|NZ_CP015604|CRT matches to MT408532 (Synechococcus phage SynMITS9220M01, complete genome) position: , mismatch: 5, identity: 0.833

caactcctgcagcaacgcctaaaccatctc	CRISPR spacer
caactcctacaccaacgcctaaacccacac	Protospacer
********.** *************  * *

2. spacer 1.2|564037|30|NZ_CP015604|CRT matches to NZ_CP013981 (Staphylococcus equorum strain KM1031 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

caactcctgcagcaacgcctaaaccatctc	CRISPR spacer
caactcctgcaacaacacctaaagctaaat	Protospacer
***********.****.****** *    .

3. spacer 1.2|564037|30|NZ_CP015604|CRT matches to NC_014390 (Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence) position: , mismatch: 9, identity: 0.7

caactcctgcagcaacgcctaaaccatctc	CRISPR spacer
caactcctgaagcaatgcctaaattcaaat	Protospacer
********* *****.*******..    .

4. spacer 1.2|564037|30|NZ_CP015604|CRT matches to MK721189 (Enterococcus phage vB_EfaS_Ef2.2, complete genome) position: , mismatch: 9, identity: 0.7

caactcctgcagcaacgcctaaaccatctc	CRISPR spacer
acgaagctgctgcaacgcctaaaccacctg	Protospacer
  .   **** ***************.** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 280480 : 291038 12 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_2 539302 : 548817 10 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_3 565184 : 574036 8 Thermobifida_phage(16.67%) NA NA
DBSCAN-SWA_4 1061469 : 1069570 10 Agrobacterium_phage(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage