CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016304	Candidatus Portiera aleyrodidarum MED (Bemisia tabaci) strain MEAM1 chromosome, complete genome	3 crisprs	NA	0	1	0	0

Cas Category Instructions

Results visualization

1. NZ_CP016304

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016304_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016304_1

176972-177058

Orphan

Consensus_repeat	Method
TGTGTTTTATGTTTTTGTGTAGTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016304_1

>merge|NZ_CP016304|1|176972-177058|CRISPRCasFinder
TGTGTTTTATGTTTTTGTGTAGTTAATTTAAAAAGTTATGTTAGTAATTAGATATTACGTGCTGTGTTTTATGTTTTTGTGTAGTTA

>NZ_CP016304|1|1|176972-177058|CRISPRCasFinder
TGTGTTTTATGTTTTTGTGTAGTTA	ATTTAAAAAGTTATGTTAGTAATTAGATATTACGTGC
TGTGTTTTATGTTTTTGTGTAGTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016304.1\|WP_014895163.1\|175374_175962_+\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|234873
NZ_CP016304.1\|WP_014895164.1\|173532_174462_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP016304.1\|WP_014895151.1\|193447_194074_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234971
NZ_CP016304.1\|WP_014895158.1\|180404_181448_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NZ_CP016304.1\|WP_014895157.1\|181455_182400_+\|homoserine-kinase	unknown	unknown	gnl\|CDD\|270702
NZ_CP016304.1\|WP_014895169.1\|166733_166982_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP016304.1\|WP_014895165.1\|172524_173169_+\|MarC-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236814
NZ_CP016304.1\|WP_014895154.1\|191149_192208_-\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase	unknown	unknown	gnl\|CDD\|223352
NZ_CP016304.1\|WP_014895152.1\|193003_193432_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP016304.1\|WP_014895153.1\|192593_192977_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP016304.1\|WP_014895167.1\|168039_168531_-\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NZ_CP016304.1\|WP_014895159.1\|179619_180393_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP016304.1\|WP_014895160.1\|178873_179590_+\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108
NZ_CP016304.1\|WP_014895155.1\|186557_189107_-\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NZ_CP016304.1\|WP_014895156.1\|182406_183417_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP016304.1\|WP_014895166.1\|168537_170280_-\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|180578
NZ_CP016304.1\|WP_014895162.1\|175973_176594_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|223196
NZ_CP016304.1\|WP_014895170.1\|166416_166725_-\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|274061
NZ_CP016304.1\|WP_014895168.1\|167001_168018_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP016304.1\|WP_014895171.1\|165874_166228_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418

Protein	Function_ID	Function_description	E-value
NZ_CP016304.1\|WP_014895163.1\|175374_175962_+\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	1.2667e-91
NZ_CP016304.1\|WP_014895164.1\|173532_174462_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	9.82505e-66
NZ_CP016304.1\|WP_014895151.1\|193447_194074_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234971	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed.	1.20814e-92
NZ_CP016304.1\|WP_014895158.1\|180404_181448_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	1.15666e-177
NZ_CP016304.1\|WP_014895157.1\|181455_182400_+\|homoserine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.74609e-101
NZ_CP016304.1\|WP_014895169.1\|166733_166982_-\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	2.5862e-32
NZ_CP016304.1\|WP_014895165.1\|172524_173169_+\|MarC-family-NAAT-transporter	gnl\|CDD\|236814	PRK10995, PRK10995, MarC family NAAT transporter.	9.45136e-63
NZ_CP016304.1\|WP_014895154.1\|191149_192208_-\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase	gnl\|CDD\|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	3.61677e-53
NZ_CP016304.1\|WP_014895152.1\|193003_193432_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.17825e-66
NZ_CP016304.1\|WP_014895153.1\|192593_192977_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	5.0145e-65
NZ_CP016304.1\|WP_014895167.1\|168039_168531_-\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	5.79128e-82
NZ_CP016304.1\|WP_014895159.1\|179619_180393_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	6.8689e-154
NZ_CP016304.1\|WP_014895160.1\|178873_179590_+\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	3.71551e-101
NZ_CP016304.1\|WP_014895155.1\|186557_189107_-\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NZ_CP016304.1\|WP_014895156.1\|182406_183417_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.23413e-09
NZ_CP016304.1\|WP_014895166.1\|168537_170280_-\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|180578	PRK06466, PRK06466, acetolactate synthase 3 large subunit.	0
NZ_CP016304.1\|WP_014895162.1\|175973_176594_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|223196	COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism].	5.20603e-79
NZ_CP016304.1\|WP_014895170.1\|166416_166725_-\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|274061	TIGR02273, Ribosome_maturation_factor_RimM, 16S rRNA processing protein RimM. This family consists of the bacterial protein RimM (YfjA, 21K), a 30S ribosomal subunit-binding protein implicated in 16S ribsomal RNA processing. It has been partially characterized in Escherichia coli, is found with other translation-associated genes such as trmD. It is broadly distributed among bacteria, including some minimal genomes such the aphid endosymbiont Buchnera aphidicola. The protein contains a PRC-barrel domain that it shares with other protein families (pfam05239) and a unique domain (pfam01782). This model describes the full-length protein. A member from Arabidopsis (plant) has additional N-terminal sequence likely to represent a chloroplast transit peptide. [Transcription, RNA processing].	1.46453e-19
NZ_CP016304.1\|WP_014895168.1\|167001_168018_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP016304.1\|WP_014895171.1\|165874_166228_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	2.48959e-53

>NZ_CP016304.1|WP_014895162.1|175973_176594_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MAIIIIDYGIGNLYSVANAIKKVTKEKVYITNDAKKIKLSNRIILPGQGAIKDCIKELKKKELYWLLKEIINTTNKPVLGICIGQHLLMESSEENKGVFGINYIKGIVKNYKNKNFKIPHTGWNIVYKHKEHQIWNGIKSGSRFYFVHSFYVKTRFKNNVLGVTEYGGKCANVITYYNSVITVQFHPEKSSSLGLKFLKNFINWLP
>NZ_CP016304.1|WP_014895163.1|175374_175962_+|imidazoleglycerol-phosphate-dehydratase-HisB
MSVNKKKKYRTANIYRETKETKIRVYVNLDGQGKINIKCGIELLEHMLDQITNNGQIDLTIKTNVYSHIDHHHTIEDIGIAMGKAFKKALGKKIGIKRYGCSYVPMDESLSRVVIDLSGRPSLHMTKVGKFDLFREFFKGWVNNCKSTLHIDILKGFNSHHQIESIFKSFGISIRKAITKDKRITNKLYSTKGTL
>NZ_CP016304.1|WP_014895164.1|173532_174462_-|RluA-family-pseudouridine-synthase
MKTIKCLLSIRKGLRLDKTSRKLFYITREKIKTFIKKKIRLDGFTVKQNIFLKKFKWISLIHYTKLYIVERVFEPDYFYKNYENNEILVINKRFGLVVHPSKSNIKGTLVNAILSYKKTDFINLPRAGLVHRIDKDTSGLVIIAKNLVSYRDLKTKIKEKSIIREYDVVVLGQLDIGGYINSQIGRNIKYRKKKNIVNDEGKIAITHFRVLERFNTHTYLRCWLETGRTHQIRVHMQSISRAVIGDELYLNNKILPNLNIRQALHAHCLILKHPSKQIYIKLLAKLPKDMTLLLALLRTNKIHTISHTL
>NZ_CP016304.1|WP_014895165.1|172524_173169_+|MarC-family-NAAT-transporter
MFIEYIHSVLFFFITLLPVANPIASTTLLLTLGKKIKAKERKKQIYFATLYVGIIILVCFYAGKNILNAFGVSINALRLAGGIILLYFGFDLLFNVTEKKQITEKNHLQQSHLNISFVPLALPGTAGPGTIALIISSSSSLPSSCLIHFVIWSVTALFTLMFLICLLSANKIFKRIGPSGIDAISRIMGFILISMGVQFIITGFQNMLIVLFHL
>NZ_CP016304.1|WP_014895166.1|168537_170280_-|biosynthetic-type-acetolactate-synthase-large-subunit
MELLSGADMIIRFLKDENVKYVYGYPGGAALHIYDALFRQKVVKHILVRHEQAATHMADGYARASVKPGVVLVTSGPGATNAVTGIATAYMDSIPMVILCGQVVSKLIGEDAFQETDIVGVTRPIVKHSFTIRDTADIPTILKKAFYIASTGRLGPVLVDIPKDMTAPNELYEYIKQNDIKLREKKKNVCNNKEFIKKALKLLLKAKKPVLFVGGGAITGKASQKIREFANIAYLPVVTSLMGIGAYPQSDFQYIGWPGMHGSYEANNAMHNSDLIFCVGARFDDRVTNNTEKFCPNAKVIHVDIDPCSISKTILADIPIIGSAKKVVKELLSKINKSYKDEINLENRKKHLEIWWKCINKWIKNRDGKLYKPVTALSRDLIKPQQVIEAVYKKTKGEAIIATDVGQHQMFAAQYYKFNKPNKLITSGGLGTMGFGLPAAMGVKLSYPHENVVLITGEGSFQMMMQELSTCKQFDISLKIIHLNNGSLGMVRQWQDINYKARHANSYVESLPEFHRLFEAYGLNAITVKVIEELESALETVFINKNELVFLNIYIDPLEHVYPMQKPLGAINDMIISKAE
>NZ_CP016304.1|WP_014895167.1|168039_168531_-|acetolactate-synthase-small-subunit
MRHIISILLENEPGALSKIVGVFSQRNFNIETLNVAHTEDITLSRLTLTTNGDACVIEQIIKQLNKLVDVVKILDLTEVSHIARELMLVKVKAEADDRRAEIKRITDIFRANIVDVTTTDYIIQITGDEDKLDAFINALKGINEVVRTGVSGIPRVWVKVKLS
>NZ_CP016304.1|WP_014895168.1|167001_168018_-|ketol-acid-reductoisomerase
MKIYYEKDCNRSLIKQKRVVVIGYGSQGHAHANNLKDSGVNIKVALYKGSRSWKKAEVAGLKVEVIEKAIIDADIVVMLVPDELQKNIYYRYVENNIKSGAVLIFAHGFNVHYQQIEPRQDIDVVLVAPKAPGHTVRTTYMQGGGVPSLIAIYKDNSGKAKDIALSYASAIGCGKTGIIQTTFKEETETDLFGEQAVLCGGVSALITAGFEVLVEAGYSAEMAYFECLHELKLIVDLIYEGGLGDMRYSISNTAEYGDYVSGQKIINNDTKKNMKTLLENIQNGKFAKDFIIEKKTGFTLLKTKRRINSEHKIEKVGKVLRSMMPLICKNKIIDKNKN
>NZ_CP016304.1|WP_014895169.1|166733_166982_-|30S-ribosomal-protein-S16
MVKIRMTRCGCKNRPFYQINVKDSRSSRDGKFIEKIGYYNPLVISEKRFCINSSRLGYWKNKGAKISNRVLSLLKKNKKDKK
>NZ_CP016304.1|WP_014895170.1|166416_166725_-|16S-rRNA-processing-protein-RimM
MGSIAKSYGVKGWIKVNSYTNQRCNIIDYSRLWILEIKGKNIYFKVKRIRLVHRFFIVQLYGIKTCEKAKTLIGSLIKLQKKLLPNLQKGEYYLYQFKNLRV
>NZ_CP016304.1|WP_014895171.1|165874_166228_-|50S-ribosomal-protein-L19
MSINQLIQAIELEQMKTKIIPKFMTGDTVIVQIKVLEGSIERLQAFEGLVIGKRNRGLNSSFTVRKVTSGIGIERTFKTYSTCIFSIKINRKGKVRKSKLYYLRDLKGKSARINNIS
>NZ_CP016304.1|WP_014895160.1|178873_179590_+|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MLIIPAIDLKNGKCVRLKQGRMYKTTDYGDPLKVVQRFVKIGIKRLHVIDLNGAVLGEPVNKYIINKLIKHYPNLILQIGGGIRNSATIKKYLDVGIKYVIIGTLAIKKPHRLYNLCKKFGKHIILSIDSYKGYVAIDGWKKIANIKSTELAKNVSNCGISSIIYTDISRDGMMQGLNLKKTIKLANFAKIPIIASGGLNNVFDIVNLKTNKNTFILGTIIGRAFYEGKIDLYKALLI
>NZ_CP016304.1|WP_014895159.1|179619_180393_+|imidazole-glycerol-phosphate-synthase-subunit-HisF
MSLSKRIIPCLDIDCGKVVKGIKFENTRYAGDPLKIAKFYNEQKADEIALLDIKASYSGKNNTIEVVKKIANEIFIPLTVGGGIKTCKNIRELLNAGADKISINTAAVLNPKIVREASDKFGSQCIVVAIDAKRKTNKNIKEDWEVLTYGGRKNSGISAIDWACKMVKYGAGELLITSIDRDGTKRGFDINLIKTISQRVNVPIIASGGVGNLDHFVEGIKTGKADAVLAASIFHFGEYTIDKAKKYMAKKGISVRF
>NZ_CP016304.1|WP_014895158.1|180404_181448_+|histidinol-phosphate-transaminase
MRMSYKINKLHPYTPGEQPYKKMIKLNTNENPYPPTPKINKLLKNFNYYKLRLYPDPTTSKLRKIIAKVYNVKSEQIFIGNGSDEVLALAFMTFFCQKLPLLMPTITYSFYPVYCKLYNIRYKTIPLQNKFEINLKKMNISNGGIIFANPNTPTGHAISYIEVNKLLDIHNEYVVLIDEAYIKFGSESAIPLIKKYKNLLIVNTLSKAYSLAGIRIGFAIGSTYLIKGLEKVKNSFNSYPIDVISELIAIEAIKDIKYLKKICNYIIYIRETLSKQLKDVGFTVLPSKANFMLVKPNNISAKTMFIKLRNHGILLRYFNNIKKYIRISIGTIQQMNYLIETIKYILK
>NZ_CP016304.1|WP_014895157.1|181455_182400_+|homoserine-kinase
MAVFTKIKKQKLSLFLKSFNIKKQIKFKEVKQGTENSTFFIQTETKKFVLTLFEQGSYKDLTGFIDLLKFLYEHCLPIAMPLIDKNNIIIKKLSGKHALLFPKLYGIHPRTQNIEQCSIIGKTLGRLHSISNKFKLKKQNLRDINWIVLNYYKVISLLTKEDQELMFNQIYLLKHIVTNLPQGILHGDLFRDNTLFNGNNICGLIDFYNGCTGDLIFDLAILINDWCSDQHGNLLEDKYKAILNHYVLERPFTKEEVYILPKMLRLTALRYWISRLLVKNIFPVTHNLRHKEPKKYRDILVSHCKNKYPLYFKN
>NZ_CP016304.1|WP_014895156.1|182406_183417_+|AI-2E-family-transporter
MNNYMLTRATVISLLIYFMGLLLIFPLHLLPCLLSGLFVFELVKAITPLLQTLIPVNKARLSSVVLLGASIVTILSLFFFTVISFILQDIKTPDNLIQRYMLIFDKARHQLPHSVVIYLPESADELSQIINELIYKHVNELQFVFGCAIHTCFSLLSGMILGAIIALQDIPDIKSLTPLTYALLQRSITLSNAFHNVVFAQLKISLVNTLLSSILLLICAPCLNVYIPLTKTLILITFIMGLIPLIGNLISNILIFIVSLSVSLWTAVIALTYLIAIHKLEYFLNARIIGLRINSNAWELLFAMLFFDAAFGFSGLIAAPMYYAYFKCELTNEKVI
>NZ_CP016304.1|WP_014895155.1|186557_189107_-|DNA-mismatch-repair-protein-MutS
MKTKIKKNIYNATPAITQYLRIKNHYHKILLMYRMGDFYEFLFEDAHTASALLNIQLTSKGKYNNKRIPMAGIPCHSLRTYLKRIITAGISVAICEQIKTKKTKKSKLLERKVIRVITPGTLYEDSLLDESKDNLIISIIQKNNKWGISWLEFTTGAFGVLEVDNIHDLRLELDRLNPVELLISRLHKKLPKLPVHKSIIKPISDINFDYNNACKVLFKKLNIKNINKKLNAGVSAAGAIIQYINNNKIYNLAHINHLIFENKKDKLKIDRITKKHLELDVNVNGKQENTLFSVLNNTMTHMGSRLLKKWINNPITNYDLVFSRQKGVEIVLTNNFIDILQKYIKKIGDIERIVTRISLKTAKPLDLIKFKIALNVFPKLKTLLKGLLIVNKNSKSILNYIHKEIFTFPNIALLLDEALVDNPPNSFRYGYVIKSHFNKNLDKLRKIYTNSEKFIKTFENKEKLRTGIIKLKVTYNKLHGLFIEIPKGRKHKYKIPKNYIRTKTLKNSERFYTSELKYFEKRLIESKEKSIKYEKSIFKKLIKVLVGNIPYFIKTSKSLATLDVITTFAERALTLNYCKPIINKNKIGIKIMEGRHPVIESTTNHHFVPNNLFLNHNKSIHIITGPNMGGKSTFIRQIAIIVLLTYIGSYVPAKYAEIGPIDQIFTRIGGYDDLSAGKSTFMIEMHETAKILNTATFKSLVLMDEIGRGTNPTEGLCLAWACLERIIQIKALTLFSTHYFSLTQIAKKFKQITNLHFSASIKSNKVSYIYNIQKGATNNSYSSSVASLANIAQGVINKSNNLIKHFQDHQKSLNKRHTLMKYIKSFKYKDLTRYLKFIKSFFKNLKDMF
>NZ_CP016304.1|WP_014895154.1|191149_192208_-|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase
MTHKSLFFNKAIDYLITNKDGLYIDCTLGLGGHSKQILNRLSINGLLIALDNDLNTKTLVKNLEFYLDKRFSFININFKYLEIIAKKKHLFGIVSGILLDLGISTYQIKDYKRGFSFFINGPLDMRINNTFGITACCLLNHYKFKQIFKIFKTYGEDEQLYRLTVEICNRRHHFPFKMTLELSNLIKTLKFTNYHIKHQLIKTKPKIQKTYIIHHKSIKIKQKFIKHSKSINTKHIIIKENTTKNKIIKTNNNSINKKKKKHIHPSTKIFQAIRSYINNEIQNLEIVIITSLKLLKTNKKLIIITFNSLESQIVNKVLKTTLNKVNKIYPSIEEVFYNNSSRCSAIFIIQKL
>NZ_CP016304.1|WP_014895153.1|192593_192977_-|30S-ribosomal-protein-S9
MYFYGTGRRKTASARVFLKIGNGKFIINNNTLKKYFHNINLYYLMIQPLELTNNVNTFNIKITVNGGGVKSQAEAIRHGISRALVAYNNNLRYKLRLNGYLKRDSREVERKKIGFKKARKSPQFSKR
>NZ_CP016304.1|WP_014895152.1|193003_193432_-|50S-ribosomal-protein-L13
MKTLNVKINDLKTEWYIINAYNKKLGRLSTKIVHFLLGKNKVIYNSYLNIGDNIIVINADQIKITGNKLIQKKYYYHTGYPGGLRKTTLLELMKKNPEKVIKQSVKGMLPKNSLGRLISKKLKIYKGKQHPHISQQPLELLI
>NZ_CP016304.1|WP_014895151.1|193447_194074_-|ATP-phosphoribosyltransferase
MIEPLVIALSKGRILFKSLSLLKKAGIIPIESVENNRKLLFNTKKKYLNLIILRAIDVPTYVKLGAADMGIVGKDVLLENGSKGLYEPIDFKISKCRLMTAGLIGFNVKNTTRKVATKFVNIAKRYYASKGIKANIIKLYGAMELAPIMNLAEEIIDIVDTGNTLKENGMEPKTLIKNISTRLIVNKTSMIIKYKSINPLIELLISII

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Crispr_ID: NZ_CP016304_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016304_2

215927-216020

Orphan

Consensus_repeat	Method
GTTAAAAGAATAATGAACGAAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016304_2

>merge|NZ_CP016304|2|215927-216020|CRISPRCasFinder
GTTAAAAGAATAATGAACGAAAAAAAAGATTTAGTAACAGCGAAATAGATCAAAGCAATAGAAAAAAGTTAAAAGAATAATGAACGAAAAAAAA

>NZ_CP016304|2|2|215927-216020|CRISPRCasFinder
GTTAAAAGAATAATGAACGAAAAAAAA	GATTTAGTAACAGCGAAATAGATCAAAGCAATAGAAAAAA
GTTAAAAGAATAATGAACGAAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016304.1\|WP_014895139.1\|206868_207447_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552
NZ_CP016304.1\|WP_157677923.1\|209392_209542_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016304.1\|WP_014895127.1\|223347_223536_+\|YfhL-family-4Fe-4S-dicluster-ferredoxin	unknown	unknown	gnl\|CDD\|224066
NZ_CP016304.1\|WP_014895133.1\|213342_213633_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP016304.1\|WP_014895132.1\|213668_215300_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP016304.1\|WP_014895140.1\|205840_206863_-\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
NZ_CP016304.1\|WP_014895134.1\|212047_213130_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP016304.1\|WP_014895136.1\|209761_210526_-\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|378455
NZ_CP016304.1\|WP_014895126.1\|223532_224339_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP016304.1\|WP_014895130.1\|217972_219214_-\|acetylornithine/succinyldiaminopimelate-transaminase	unknown	unknown	gnl\|CDD\|179933
NZ_CP016304.1\|WP_014895128.1\|222781_223345_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_CP016304.1\|WP_014895129.1\|219385_222034_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP016304.1\|WP_148267230.1\|232933_234154_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
NZ_CP016304.1\|WP_014895123.1\|229028_231620_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP016304.1\|WP_014943274.1\|228555_229032_+\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|237573
NZ_CP016304.1\|WP_014895138.1\|207424_208891_-\|chorismate-binding-protein	unknown	unknown	gnl\|CDD\|184146
NZ_CP016304.1\|WP_014895141.1\|205022_205841_-\|indole-3-glycerol-phosphate-synthase	unknown	unknown	gnl\|CDD\|234710
NZ_CP016304.1\|WP_016858028.1\|211719_212034_+\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_CP016304.1\|WP_014895131.1\|216152_217979_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP016304.1\|WP_014895125.1\|224344_225526_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288

Protein	Function_ID	Function_description	E-value
NZ_CP016304.1\|WP_014895139.1\|206868_207447_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	1.00194e-92
NZ_CP016304.1\|WP_014895127.1\|223347_223536_+\|YfhL-family-4Fe-4S-dicluster-ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
NZ_CP016304.1\|WP_014895133.1\|213342_213633_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.7388e-41
NZ_CP016304.1\|WP_014895132.1\|213668_215300_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP016304.1\|WP_014895140.1\|205840_206863_-\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	2.77802e-101
NZ_CP016304.1\|WP_014895134.1\|212047_213130_+\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	1.22456e-130
NZ_CP016304.1\|WP_014895136.1\|209761_210526_-\|P-loop-NTPase	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	4.3098e-99
NZ_CP016304.1\|WP_014895126.1\|223532_224339_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	1.01232e-114
NZ_CP016304.1\|WP_014895130.1\|217972_219214_-\|acetylornithine/succinyldiaminopimelate-transaminase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
NZ_CP016304.1\|WP_014895128.1\|222781_223345_+\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.10726e-111
NZ_CP016304.1\|WP_014895129.1\|219385_222034_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP016304.1\|WP_148267230.1\|232933_234154_+\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.06272e-44
NZ_CP016304.1\|WP_014895123.1\|229028_231620_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP016304.1\|WP_014943274.1\|228555_229032_+\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|237573	PRK13963, PRK13963, rRNA maturation RNase YbeY.	5.1182e-23
NZ_CP016304.1\|WP_014895138.1\|207424_208891_-\|chorismate-binding-protein	gnl\|CDD\|184146	PRK13565, PRK13565, anthranilate synthase component I; Provisional.	2.02146e-177
NZ_CP016304.1\|WP_014895141.1\|205022_205841_-\|indole-3-glycerol-phosphate-synthase	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	1.05923e-90
NZ_CP016304.1\|WP_016858028.1\|211719_212034_+\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	1.14535e-51
NZ_CP016304.1\|WP_014895131.1\|216152_217979_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP016304.1\|WP_014895125.1\|224344_225526_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0

>NZ_CP016304.1|WP_014895132.1|213668_215300_+|chaperonin-GroEL
MAAKQIRFSEDARTRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRSPMDLKRGIDKAILASVEEIKKLSVKCTDSRSIAQVGTISANGDSNIGQLIAKSMEKVGKKGVITVDESRGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVDKKISNIRELLHLLENVAKSGKPLMIIAEDIEGDALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDLAILTGSTVISDEIGLNIEKVTIKNLGNARRITMSKENTTIIDGAGSERDIESRVKQIRKQIEETTSDYDKEKLQERVAKLSGGVAVIKVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALIRILNKLQNLKGNNEDQTHGIKIALKAFEAPLRQIVNNAGEEASVIINKVKEGVGNYGYNVSTGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHQDENNKMPHSTDGVNGMRS
>NZ_CP016304.1|WP_014895133.1|213342_213633_+|co-chaperone-GroES
MKIRPLHDRVVVRCIEVEQKTSGGIVLPGNAQEKQNRGEVVAIGKGKILNNGAIRPLDVKIGDTVIFKESFGVEKQKIEDEEVIIMSESDILGILE
>NZ_CP016304.1|WP_014895134.1|212047_213130_+|argininosuccinate-synthase
MSKKVILAYSGGEKQSVIANWLQCNYGYEIITFTADLGQEKKKIELAYKKAKVLGIKKMYIEDLKESFVTKYICHRFRANTIYECGKKIGASIVRPLIIKRLIEIAKLNKTTNISYGTTKKSKDLIRLDLSTYSLNPYIKIIAPWRDLNFISQNKLRTYFKKKKFSNEFVQKHKISCSVNNDFLHIFSKCGCLDNTWNEAKKKRCILSNFFKNTPDKPTYIDITFKQGNPTSINSEVLKSHEIMIKLNNLGSKHGIGRVNKIRYYGSGLKARCCYENPGVTILYHAHRAIESFTLDHEILQIKDILMPLYAEKVYTVNLWTKEIKMLKALIDTSQKYVNGIVRIKLYKGNVVIIGIKSDQ
>NZ_CP016304.1|WP_016858028.1|211719_212034_+|Grx4-family-monothiol-glutaredoxin
MKNKTIEIIKNQIKKNKIILYMKGTPNLPQCGYSAQAVKFIKKYLNRFKYINVLESVHIRHELPKWSKWPTFPQLWINSKLIGGSDIIFEMYKTGELKRLIKKR
>NZ_CP016304.1|WP_014895136.1|209761_210526_-|P-loop-NTPase
MININYIIAIASGKGGVGKSTITANLALAMNVKGYKVGLLDADIYGYSQSTILNVKKKIFINKKKRIQPIPYYGIKAMSLGFIVKKQTKAIIGRGPIISKLLVDLFTNTNWGYLDYLFIDMPPGTGDIMLSISKSISVSGVIIITTPQDVSLLGAFKGINMFNKIKIPIIGLIENMSYYTCKSCGYSTSIFNNKYNNILKKYKIKKIGCFALHKTLCDKKPILIAKPNSKISVFLKVIADIVDIKLKPQFRIGL
>NZ_CP016304.1|WP_157677923.1|209392_209542_-|hypothetical-protein
MSYEVQIGIYLHKELDINKIHVERIKVKDNKIIVVPILCACLSMMMNIQ
>NZ_CP016304.1|WP_014895138.1|207424_208891_-|chorismate-binding-protein
MKRILIYKEIISDLDTPLSLYMKVANYHWTFLLESIEGKKQWCRYSIIGLRCHQRIEIYNNKINLFKDKIKIEKTKKIDTLVWLSKYIKTIKKTILKKNKSKTILDGGLVGYLGYDIIRLIEPTIKTYKQYNPINTPDIFLLRANELLIIDKYSGRLTILVNVNIYDLKKGLERIKIILKKLSLCANFNKTELVTHSFQTHIKHKYTLKPIFSSFNKFTFQNYIINLQKYINSGDVMQCVPSQRIIIPFYSQPFNLFRALRVLNPSPYMLFFNFNDHYVVGSSPEILVRVDNKTITLRPIAGTIQKRSGIHNEILKDYKEVSEHIMLIDLGRNDVGKVSSTVRVQNQFLIERYSHVRHIVSTLIGILKHKIDLIDIVRATFPAGTIAGAPKIRALEIINTLEPIRRGIYSGAIGFLSWNGNMNIAIAIRTAIVKNYKLHIQAGVGIIEESQYKKEWNEILNKSSVILKAALIAIVEEKGDKVENINYR
>NZ_CP016304.1|WP_014895139.1|206868_207447_-|aminodeoxychorismate/anthranilate-synthase-component-II
MRILIIDNYDSFTFNIVHYFFELGVDVNIIRNNLNIKNIENGYFTHLVISPGPCTPNKAGFSIEVIKHFANKIPILGICLGHQIIGQVFGCKMRKSTQLFHGKTSRIKHINKGLFKGFKTPILINRYHSLIIDRKYLPDNLEVTAQTDCYDITPNVIMGIKHKQYNIEGLQFHPESILSFKSHGLLKNFIKK
>NZ_CP016304.1|WP_014895140.1|205840_206863_-|anthranilate-phosphoribosyltransferase
MINTILNKLINKRNIKFNQFYKIMKVINFGKIKSTQLASILTALSIKKETSDEIAATAKVINDYYSFNIHNNKVMDLVGTGSDNFNFFNISTSSSFVVAAAGSINVAKFGSKSISSYSGSLDLLNVLGINLYLKKKDIRKCIKRLQLVFLISEFKYKKKIRKIRMDIRIPTIFNIVGPLTNPIKPFKQLVGVYDRRLLNIFSKVFMKLGSKKTLIIHSKEGSDEISLNKATYISELNNGKIINFLINPTKFFLKKNTLDFIQIKSVLQSLDIVIHSIKGHFGLAFEMILLNAGTALYVSGIVNNIHNGLELSKYILISGKAYKKLKTIVFFTKCFKKGIL
>NZ_CP016304.1|WP_014895141.1|205022_205841_-|indole-3-glycerol-phosphate-synthase
MKILFNILKYKRNTINVCINKLSLKILRKGFYSNKEQFSNNKFIKSIKNKQYKNQTSIIAEIKRCSPSKGIITETKNIEKLALNYFLNGAVCISILTEKNFFKGSKKYILTVKKLFDIPILFKDFIIDEYQVFEARLLCTDCILLIVSILKLDLLKKLYNLALSIGLDVLLEIHNLLELEVALFSLNAKFIGINNRNLYTFNTSINITISLLKYMPSNVVFVTESGILNVNDFIKLQMFGVNVFLIGEFLLSNNDIFLRTLLDKANKYILTY
>NZ_CP016304.1|WP_014895131.1|216152_217979_-|elongation-factor-4
MLINTKNIRNFAIIAHINHGKSTLADRLIQLCGGLYKRDFKNQVLDSLDIERERGITIKSQAVTLFYKSKQGKTYRLNLIDTPGHVDFMYEVSRSLYACEGALLLIDASQGIESQTITNFYTAFKRDLTIIPVVNKIDLPQASPKYTISNIKKIFNLHFQSVCCISTKLGLGIKVLLETLIKTIHNPKGDPYKKLLALIIDSWFSKYLGVISLVRIFDGNLKKGDQVIINSTGQSWYIQTVGFYTPKRCLTLKLSAGQVGFFVAGIKDIHGAPVGDTITHANANTDHRISGFKKVKSKIFAGLYPENVKDFKHFSTVLERLALNDASLIYTPENSNVYGCGFRIGFLGSLHLEIIKERIEREHGIKIIITLPSVKYKIKLKTGKIEYIYDPSKLPENYKLFKLYEPIVLARIIVPKIYVGNIIKECITFRGKQLCVVFINNFIKMIYELPMAEVITNFFNRLKSVSKGYASLDYEFYRFKKSNMVRLDILINNNRIEALTMIVPFDKAYKQGQFILKRIKLLLSKQLFDLNIKAVSYKKTLAKTQIKAIRKNVTAKCYGGDITRKKKLIEKQKEGKKRMKSIGNIEIKLNKNIFLSLFKTPNLFDQFS
>NZ_CP016304.1|WP_014895130.1|217972_219214_-|acetylornithine/succinyldiaminopimelate-transaminase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPVLLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIHNFRKVINNYTCAVIIEPIQGEGGINVANYSFFKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINLGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC
>NZ_CP016304.1|WP_014895129.1|219385_222034_+|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLLNIHKVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKKLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINLKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVIKGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLNKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKINLKLNTKTSFTAITTNKK
>NZ_CP016304.1|WP_014895128.1|222781_223345_+|peroxiredoxin
MAIINKKIRPFTATAYLNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>NZ_CP016304.1|WP_014895127.1|223347_223536_+|YfhL-family-4Fe-4S-dicluster-ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>NZ_CP016304.1|WP_014895126.1|223532_224339_-|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKNAQIDGLIIVDLPPEHAQEVSVPANKQGIDFINIITPNTNIKRIPFIVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>NZ_CP016304.1|WP_014895125.1|224344_225526_-|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARLGMKCVIYMGSTDVKRQKENVYRMNLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGKEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVINMSGRGDKDISIIREHS
>NZ_CP016304.1|WP_014943274.1|228555_229032_+|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSWFCSFLKPKYKHYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKKNKAFIAHCAHIIVHGLLHLIGYNHKNVTDADNMENIEYSNLNKTNIHL
>NZ_CP016304.1|WP_014895123.1|229028_231620_+|leucine--tRNA-ligase
MMYPFSYKKIELEAQNFWYNHNCFEIVEIPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTNSNIYYMYNQLKSLGFSYNWDRKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRCLANIDWPESVKKMQVNWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYILLAPDHHLVELAAQYNYQIKKLCNTFTFCGKCSLATLKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFYFIKQYKSGVVKQKLKLRDWGISRQRYWGTPIPVKYGITGKQTPLTDEEIPVYLPKHGCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNNNSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKDKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVLHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDAKWPSYNKHCMLGQLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISIKGYLNCKEIHTLIFVHAKVINIVVSL
>NZ_CP016304.1|WP_148267230.1|232933_234154_+|hypothetical-protein
MQKILNKEGKNINFISENTQGTIILKISSFIFEKGGQVISDVGYIYNKLGKFKVYNVIKHNSLFFHVGTLLKGYFSNTTHVNCYIDKIIRYNISVAHSAIHLLNVTIQRVAKKKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKNIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNFNMLYTKTLKTNIKTFLFKRGL

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Crispr_ID: NZ_CP016304_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016304_3

236344-236436

Orphan

Consensus_repeat	Method
TAACTTTACAACAATTACACACCAATACAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016304_3

>merge|NZ_CP016304|3|236344-236436|CRISPRCasFinder
TAACTTTACAACAATTACACACCAATACAACATTTTTTTATCTTATATAATATGACGGTAATTAACTTTACAACAATTATACACCAATACAAC

>NZ_CP016304|3|3|236344-236436|CRISPRCasFinder
TAACTTTACAACAATTACACACCAATACAAC	ATTTTTTTATCTTATATAATATGACGGTAAT
TAACTTTACAACAATTATACACCAATACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016304.1\|WP_014895127.1\|223347_223536_+\|YfhL-family-4Fe-4S-dicluster-ferredoxin	unknown	unknown	gnl\|CDD\|224066
NZ_CP016304.1\|WP_014895123.1\|229028_231620_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP016304.1\|WP_014895129.1\|219385_222034_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP016304.1\|WP_014895120.1\|237450_238311_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NZ_CP016304.1\|WP_014895117.1\|244149_245847_-\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP016304.1\|WP_014895126.1\|223532_224339_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP016304.1\|WP_014895130.1\|217972_219214_-\|acetylornithine/succinyldiaminopimelate-transaminase	unknown	unknown	gnl\|CDD\|179933
NZ_CP016304.1\|WP_014895128.1\|222781_223345_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_CP016304.1\|WP_014895125.1\|224344_225526_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP016304.1\|WP_148267230.1\|232933_234154_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
NZ_CP016304.1\|WP_014895109.1\|260668_261640_+\|glucokinase	unknown	unknown	gnl\|CDD\|234716
NZ_CP016304.1\|WP_014895116.1\|245947_247294_+\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP016304.1\|WP_014895110.1\|260207_260663_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP016304.1\|WP_014943274.1\|228555_229032_+\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|237573
NZ_CP016304.1\|WP_014895115.1\|247326_248709_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP016304.1\|WP_014895112.1\|257758_259360_-\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
NZ_CP016304.1\|WP_014895113.1\|254368_255730_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP016304.1\|WP_014895121.1\|234153_235407_+\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NZ_CP016304.1\|WP_014895118.1\|242323_242767_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|274307
NZ_CP016304.1\|WP_014895111.1\|259337_260183_-\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703

Protein	Function_ID	Function_description	E-value
NZ_CP016304.1\|WP_014895127.1\|223347_223536_+\|YfhL-family-4Fe-4S-dicluster-ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
NZ_CP016304.1\|WP_014895123.1\|229028_231620_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP016304.1\|WP_014895129.1\|219385_222034_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP016304.1\|WP_014895120.1\|237450_238311_-\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	2.02551e-141
NZ_CP016304.1\|WP_014895117.1\|244149_245847_-\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP016304.1\|WP_014895126.1\|223532_224339_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	1.01232e-114
NZ_CP016304.1\|WP_014895130.1\|217972_219214_-\|acetylornithine/succinyldiaminopimelate-transaminase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
NZ_CP016304.1\|WP_014895128.1\|222781_223345_+\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.10726e-111
NZ_CP016304.1\|WP_014895125.1\|224344_225526_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP016304.1\|WP_148267230.1\|232933_234154_+\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.06272e-44
NZ_CP016304.1\|WP_014895109.1\|260668_261640_+\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	1.84904e-123
NZ_CP016304.1\|WP_014895116.1\|245947_247294_+\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	3.42158e-126
NZ_CP016304.1\|WP_014895110.1\|260207_260663_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	1.24476e-65
NZ_CP016304.1\|WP_014943274.1\|228555_229032_+\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|237573	PRK13963, PRK13963, rRNA maturation RNase YbeY.	5.1182e-23
NZ_CP016304.1\|WP_014895115.1\|247326_248709_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	1.72467e-171
NZ_CP016304.1\|WP_014895112.1\|257758_259360_-\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_CP016304.1\|WP_014895113.1\|254368_255730_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	1.48851e-159
NZ_CP016304.1\|WP_014895121.1\|234153_235407_+\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	1.94215e-161
NZ_CP016304.1\|WP_014895118.1\|242323_242767_-\|peptidoglycan-binding-protein	gnl\|CDD\|274307	TIGR02802, Peptidoglycan-associated_lipoprotein, peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.	0.00287501
NZ_CP016304.1\|WP_014895111.1\|259337_260183_-\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	3.7233e-83

>NZ_CP016304.1|WP_014895121.1|234153_235407_+|aspartate-kinase
MGIIVQKFGGTSVGSIKNIKNIAKQISFFYKKQQKIIVVVSAMSGETNRLLCLAKLMYKKKTINDIYNHRELDVLLSTGEQVTMSLLSIALNLVGVKSKSYTGAQLSIFTDSVYTKARIQHIDTSVINKDINNNIVVVVAGFQGIDKYGNITTLGRGGSDTTAVAISTAINADECQIYTDVSGVYSTDPRLCNNSSLISYITVEDMLELSSLGSKVLQIRSVEFAVKSNMPVRLLSIFDNNPGTLLIQKRSFLEKKMENPLISGVTYNCNIENITVIVSCEVFPYVCYNILICFSDHKIDICIQNIKNLTTQFIITFTISKSDYNLLFHTIQKYICIYFCGHILADNKSVIISIVGVGIYSHKCILHNVVYTLEKHGIIILFLSTSELKLSIFVFDDYMDLALHVLHTTFNLNNIVQ
>NZ_CP016304.1|WP_148267230.1|232933_234154_+|hypothetical-protein
MQKILNKEGKNINFISENTQGTIILKISSFIFEKGGQVISDVGYIYNKLGKFKVYNVIKHNSLFFHVGTLLKGYFSNTTHVNCYIDKIIRYNISVAHSAIHLLNVTIQRVAKKKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKNIKHLKNKNKVLLDEFNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNFNMLYTKTLKTNIKTFLFKRGL
>NZ_CP016304.1|WP_014895123.1|229028_231620_+|leucine--tRNA-ligase
MMYPFSYKKIELEAQNFWYNHNCFEIVEIPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTNSNIYYMYNQLKSLGFSYNWDRKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRCLANIDWPESVKKMQVNWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYILLAPDHHLVELAAQYNYQIKKLCNTFTFCGKCSLATLKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFYFIKQYKSGVVKQKLKLRDWGISRQRYWGTPIPVKYGITGKQTPLTDEEIPVYLPKHGCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNNNSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKDKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVLHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDAKWPSYNKHCMLGQLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISIKGYLNCKEIHTLIFVHAKVINIVVSL
>NZ_CP016304.1|WP_014943274.1|228555_229032_+|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSWFCSFLKPKYKHYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKKNKAFIAHCAHIIVHGLLHLIGYNHKNVTDADNMENIEYSNLNKTNIHL
>NZ_CP016304.1|WP_014895125.1|224344_225526_-|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARLGMKCVIYMGSTDVKRQKENVYRMNLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGKEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVINMSGRGDKDISIIREHS
>NZ_CP016304.1|WP_014895126.1|223532_224339_-|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKNAQIDGLIIVDLPPEHAQEVSVPANKQGIDFINIITPNTNIKRIPFIVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>NZ_CP016304.1|WP_014895127.1|223347_223536_+|YfhL-family-4Fe-4S-dicluster-ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>NZ_CP016304.1|WP_014895128.1|222781_223345_+|peroxiredoxin
MAIINKKIRPFTATAYLNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>NZ_CP016304.1|WP_014895129.1|219385_222034_+|valine--tRNA-ligase
MKYNNWHKNWETTKRLLNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLLNIHKVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKKLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINLKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVIKGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLNKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKINLKLNTKTSFTAITTNKK
>NZ_CP016304.1|WP_014895130.1|217972_219214_-|acetylornithine/succinyldiaminopimelate-transaminase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPVLLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIHNFRKVINNYTCAVIIEPIQGEGGINVANYSFFKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINLGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC
>NZ_CP016304.1|WP_014895120.1|237450_238311_-|lipoyl-synthase
MRHKPSWIKIRVPLYNEINNIKNKIRKTYLHTVCEESSCPNILNCFNEKIATIMILGNKCTRKCPFCDVLYGKTIKINYYEPFDIIKILIKLKINYIVITSVNRDDLEDGGANHFSKCIGAINRLYKHIKIEILIPDFRGKSDIAINILIKNKPTVLNHNIETIHNLYLQVKPGATYDISLNLLKQIKKYCPKIKTKSGLMVGIGENDKQLINVIKDIKTNQVDIITIGQYIAPSNFHLPIKRWVHPTSFYFYAKLCYILGFNYIASGPLIRSSYKAKNQNYGKNI
>NZ_CP016304.1|WP_014895118.1|242323_242767_-|peptidoglycan-binding-protein
MIKKYMLKRLILAISLLLVLKNNNVILNEIKLNKFFIFNKAPFIKTIYFNYDLYYFSNKINNILKQYVIYIRNNPSKQLLLKINTNVLGNIKYNFILNKSRMSFIVNNLVLNGIHKNNIKYIICVKNKKVYNELNTLNNNKLIVNIL
>NZ_CP016304.1|WP_014895117.1|244149_245847_-|aspartate--tRNA-ligase
MRINYCGKVNQTILNSYVKLYGWVNKIRDHGGILFLDLRDMYGRTQLVIDSKKLDFTNFVLAKKLKSEYIIKVIGLIKLRPVKDGFTNKIDIFVIELNLLSKSIKLPFKLYAKKKIKEEIRFKFRYIDLRQKKYIKKILIRSQIIHKIRSFLDINKFIEIETPILSNITVEGARTFIIQSHKQTFALPQSPQIYKQILMCSGLDRYYQIAKCFRDEDLRSDRQPEFTQIDIETSFMNKQAIINVVEKMIKSLFKELLHFTFSSAFKIIKYTDAINKYGTDKPDLRVPIKITDIEDVIPQSLTCIFLNKLQKLTSQCNRIAAIKLKGGVCLSLKQIIKYISFVKLYGAKGLIWIKVYNINLGLNGLQSPILKHITDEVIHNLKKRLHLKNGDLVFCCADTINIVNTSLSVLITQIANDLKLYIKAWAPIWVVNFPLFKRDIVGTLTSYHHPFTAPTSTLDDIIYNPEKAFANSFDLIINGIELGGGSIRINDYKLQKIIFKLLGLTQRTLNNNFGFFLKAFKFGVPPHGGLALGLDRIVMLLTKSDNIRDVIAFPKTNKFICPLSV
>NZ_CP016304.1|WP_014895116.1|245947_247294_+|magnesium-transporter
MKKNNIIPNLWKALSNKNYKEIKSLLKYFRSADIAEMISRTSNKLIIQILNSQSSKRKADIFSYLPKDKQFEITKELNNEEIIKIFVKMNSDDSADVFNMFEPIRRENILRSMANKVRENLIKLSSYEDGTAGAIMTSNYVVIPENITVLQALNQIKQTAPDAETIYQIYVLDQDQKLTGTLSLRQIILANPIALIKDLMIKDVIYVHTNSKQEYVTKMISHYDFLAIPVINSEHKLVGIITYDDAMDVVERETTDDFHKSGSVGTLEYNIVRTNLLTLYSKRIFWLVLLIFGNLFSGAGIAKYEDTISSKISLVFFLPLLIGSGGNAGSQASTLMIRGLGTGEINIKDWAKLMSKELLVSGILGITMAIVIFPIGYIRGGIEVAYSVAISMIIIVIIGSLLGMSLPFCLNRLGFDPAAASAPFVATLCDSLGVLIFFSIATIILNVK
>NZ_CP016304.1|WP_014895115.1|247326_248709_-|cardiolipin-synthase
MKYIKTFLNIILFCFLLSSIIIALFMSRTPQSAIAWLISLITVPYFSIPMFWLLSCPNFCGYLIKKNSLHIKKFKNTFTINCNVQVVEKLSSMPLTQSNFVKLLINGYITFKSMFDGIKRAKKYILIQFFIIKNDKIGQELKNSLIYSAKKGVNIFVIYDQIGSHNLSKSFIKEFKKAGINLFKFGFCKGWKNLLKINFCNHRKLILIDGKEAWIGGLNIGNEYLGINKQIGYWRDTHLHIIGPSVLCLQEIFLEDWFWSTDTKIHNLNWKPILSNIKKKHIIVVPSGPINNRNNASLLIQNSINIAKQRFWITSPYFIPDQSVIDSLKLAALRGVDVKIIIPERTDHLFVYLSTFSYFSELIRVGVKFYKYIKGFLHQKVMLIDNHTASVGTINLDNRSFRLNFEITAYIIDGDFAKDVKYMLQQDLLYCNLIHLNEINCRSLINKLLSKSAFLASPIQ
>NZ_CP016304.1|WP_014895113.1|254368_255730_-|cysteine--tRNA-ligase
MYIYNTLKKNKELLVPINLNKLKIYVCGSTVYDYCHIGHGRNMFIFYFFYKYLKHRGYILKYIRNITDIDKKIIKKSIKTNENTKNLTQRIINSIHKDEKKLGLLAPDCEPKVSDYKNIIIYYINKLLKNDFAYIKKGNVFFKIKTHKLYGMLSNQTIKNLNFFLSKKFSRYKKYKLDFSLWKKSQYKFGWASPWSVGFPGWHIECSVLSKIYLGNKFDIHGGGLDLIFPHHENEKAQSELLFCKPHVNLWVHSGHLNVNNKKMSKSLHNTILVRYIIIKYNNEVINFFFLITHYRKSINFTIDQLDIVLNLLNHILYKIICITPKRQKYNNVFYNQIILALENDFNTVKAISILFNLLYKTKKAFKLGKIKKSQSLCFELIRLGKILGILKSLKKFKPQILFNINKVGSLILKRNIYKKETNFLQSDKLRISLTVFDILIQDTIKRTFWLNR
>NZ_CP016304.1|WP_014895112.1|257758_259360_-|glutamine--tRNA-ligase
MIKKNIIDYLSKDSKFRSLFKKNFITRFSPEPNGCLHLGHVKSIWVNCSLAKVLNGNCYIRFDDTNPIKENKIYITSVLEDIHWLGLKLKNINYASNYFNKLFEWALLLIKQGKAYIDDLSISEIKQYRGDFKSVGYNSPYRKRNIKDNIFFFKKMYKGFVKEGKKVLRAKIDMNSKNINLRDPIMYRIINVYHYRTGNYWKIYPSYDFTHGQSDMLEGITHSICTLEFETNRYLYQWFLKNIFNDYFKYPKQIEFSRMNISFSLTSKRKIKLLIDKNFIFGWDDPRLSTISGMRRRGYTPTSLKNLCKITGITRSNNNIDIHLQYYAIRSDLENKVIRVMCVINPIKLILTNLIVDYEEIITVKNHPFIEMGARSMYFNREIWIDLKDFNNKQNLFRLSKGKNVRLRHSYIIKCKKFVFFKNEQIKEIQGIVYLNSKHKNLEGKILKGVIHWVSVKHSVPVLIRLYNTLLHKNIVNNNSFFFTDSIGEPIFSHIKPETRVQFERIGFFCADRYDFNKTNFVFNEIISLKTFI
>NZ_CP016304.1|WP_014895111.1|259337_260183_-|shikimate-dehydrogenase
MEKKISCVFGKPIKHSMSPILHNSFGKKNNICLYYKAINIRNKILLKKEWIKFVICGGIGVNITIPYKQYAIKLANKLSYRAKIAGAVNTLIINKKNIFGDTTDGVGLIRDLNRLNINLLNKRILLLGAGGAVNSVIQQVLDLGPNKIYLVNRTLLKCKDIRNRFNLKNIIQFCSYDELKNKNAFDVIINGTSLSIKKDKINFNNNAFKTTIAYDLMYSKYITKFLKFAKNNNAKIYDGLGMLIEQAAETYFLLNNIRPKIKNLHKKIRNLLNNNDKKKYY
>NZ_CP016304.1|WP_014895110.1|260207_260663_+|peptide-deformylase
MNILKYPDKRLKFIAKPIKLINYKIRTLIFKMLNTMYAHNGIGLAATQINKHIRIFVMDISKNSNQPLIIINPKYIYVSTTYKKVKEGCLSIPNYFEYIYRSINIIIKAIDINGNKFIINASGLLSQCIQHEIDHLNGKLLIDNLSNKQKG
>NZ_CP016304.1|WP_014895109.1|260668_261640_+|glucokinase
MNHLALVGDIGGTNVRLALALVSTNQLKLYKIKIFKCINYLNVYEVIKQYISLVGCDYPKQACLAFACPVYSNFIKMTNNSWTIAKYELKHKLNLQKLKIINDFTAIALGLTHIQAKDLYKLGYGKTNNNSNKILIGPGTGLGIAGLIHTKNSWIPFSGEGGHISFAPIDNFEVYILNWFQNNYKRVSIERILCGQGIVDLYYAHVNYYINHSYNVLTTPDAITKAALKKNDPLAYKTILMFCKLLGHVTGDMALTLGAKGGVYLCGGILPRIIKILDNSDFRNSFDNKGRMSFYNKEISTWLVKSKWIGLLGSADALFNNKL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016304_3	3.1\|236375\|31\|NZ_CP016304\|CRISPRCasFinder	236375-236405	31	MN693898	Marine virus AFVG_250M937, complete genome	33384-33414	6	0.806
NZ_CP016304_3	3.1\|236375\|31\|NZ_CP016304\|CRISPRCasFinder	236375-236405	31	NC_009726	Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence	35207-35237	7	0.774
NZ_CP016304_3	3.1\|236375\|31\|NZ_CP016304\|CRISPRCasFinder	236375-236405	31	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	304976-305006	7	0.774
NZ_CP016304_3	3.1\|236375\|31\|NZ_CP016304\|CRISPRCasFinder	236375-236405	31	NC_017412	Borreliella burgdorferi JD1 plasmid JD1 lp28-7, complete sequence	7277-7307	8	0.742

1. spacer 3.1|236375|31|NZ_CP016304|CRISPRCasFinder matches to MN693898 (Marine virus AFVG_250M937, complete genome) position: , mismatch: 6, identity: 0.806

atttttttatcttatataatatgacggtaat	CRISPR spacer
atttttttatcatatataatatcatagaaag	Protospacer
*********** ********** *..* **

2. spacer 3.1|236375|31|NZ_CP016304|CRISPRCasFinder matches to NC_009726 (Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence) position: , mismatch: 7, identity: 0.774

atttttttatcttatataatatgacggtaat--	CRISPR spacer
atttttttatattatataatat--tttttatta	Protospacer
********** ***********  .  * **

3. spacer 3.1|236375|31|NZ_CP016304|CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.774

atttttttatcttatataatatgacggtaat	CRISPR spacer
ctgatgtaatcttatataatatgactttaat	Protospacer
 *  * * *****************  ****

4. spacer 3.1|236375|31|NZ_CP016304|CRISPRCasFinder matches to NC_017412 (Borreliella burgdorferi JD1 plasmid JD1 lp28-7, complete sequence) position: , mismatch: 8, identity: 0.742

atttttttatcttatataatatgacggtaat	CRISPR spacer
tattttttattttttataatatgacttacat	Protospacer
  ********.** ***********    **

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage