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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP016958 Bordetella pertussis strain E537, complete genome 4 crisprs DEDDh,cas3,csa3,DinG 0 0 26 0

Results visualization

1. NZ_CP016958
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016958_1 252689-252773 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016958_2 626097-626206 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016958_3 2912848-2912964 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016958_4 3626570-3626663 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 71085 60 Natrialba_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_2 78683 : 137157 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 165942 : 220559 48 Diachasmimorpha_longicaudata_entomopoxvirus(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_4 226551 : 288075 56 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_5 557407 : 616707 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_6 622862 : 676603 50 Salmonella_phage(33.33%) transposase NA
DBSCAN-SWA_7 725490 : 757299 22 Pseudomonas_phage(33.33%) tRNA,integrase,transposase,protease attL 722789:722807|attR 742677:742695
DBSCAN-SWA_8 1007251 : 1101288 88 Bacillus_virus(27.27%) transposase NA
DBSCAN-SWA_9 1131674 : 1202644 52 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_10 1302864 : 1360075 52 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_11 1415569 : 1471975 51 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_12 1548484 : 1608396 55 Streptococcus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_13 1653568 : 1709159 49 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 1941923 : 2011575 56 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_15 2023071 : 2072467 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2083671 : 2124362 37 Klosneuvirus(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_17 2152145 : 2217694 59 Lake_Baikal_phage(20.0%) tRNA,transposase,protease NA
DBSCAN-SWA_18 2510292 : 2568536 54 Planktothrix_phage(28.57%) tRNA,transposase NA
DBSCAN-SWA_19 2610816 : 2677316 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_20 2840930 : 2906514 53 Oenococcus_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_21 2924084 : 2983978 50 Catovirus(22.22%) tRNA,holin,transposase NA
DBSCAN-SWA_22 2988864 : 3124023 119 uncultured_Caudovirales_phage(10.0%) tRNA,transposase NA
DBSCAN-SWA_23 3237344 : 3306347 57 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_24 3321793 : 3421906 111 uncultured_Caudovirales_phage(13.79%) terminase,transposase,tRNA,tail,protease NA
DBSCAN-SWA_25 3708523 : 3841449 120 uncultured_Mediterranean_phage(10.34%) tRNA,integrase,transposase attL 3753166:3753183|attR 3797806:3797823
DBSCAN-SWA_26 4008609 : 4073521 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage