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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP016960 Bordetella pertussis strain D735, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP016960
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016960_1 250591-250675 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016960_2 432034-432127 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016960_3 997399-997493 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016960_4 1891711-1891838 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016960_5 3430296-3430405 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 70036 60 Natrialba_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136108 54 Planktothrix_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 164893 : 225404 52 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) protease,tRNA,transposase NA
DBSCAN-SWA_4 233336 : 286924 49 Bacillus_phage(25.0%) protease,tRNA,transposase NA
DBSCAN-SWA_5 390857 : 448366 52 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 590420 : 704173 114 uncultured_Caudovirales_phage(14.29%) tRNA,protease,transposase,tail,terminase NA
DBSCAN-SWA_7 710339 : 764269 49 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 886858 : 954834 59 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 978012 : 1048280 56 Streptococcus_phage(14.29%) transposase NA
DBSCAN-SWA_10 1060498 : 1117880 47 uncultured_Mediterranean_phage(37.5%) tRNA,holin,transposase NA
DBSCAN-SWA_11 1153218 : 1218802 53 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_12 1381367 : 1447867 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_13 1476038 : 1514628 36 Emiliania_huxleyi_virus(14.29%) transposase,protease NA
DBSCAN-SWA_14 1794969 : 1852248 51 Klosneuvirus(13.33%) tRNA,transposase NA
DBSCAN-SWA_15 1903497 : 1962767 52 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_16 1973007 : 2017330 46 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_17 2047103 : 2111472 52 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_18 2297953 : 2359301 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_19 2438884 : 2491998 51 Ectocarpus_siliculosus_virus(12.5%) transposase NA
DBSCAN-SWA_20 2534306 : 2585478 48 Salmonella_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_21 2684822 : 2725491 45 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_22 2729602 : 2806329 58 Bacillus_virus(25.0%) tRNA,transposase NA
DBSCAN-SWA_23 2811836 : 2868994 50 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2883469 : 2924828 30 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_25 2955214 : 3009445 51 Planktothrix_phage(16.67%) transposase NA
DBSCAN-SWA_26 3378849 : 3499094 103 Acinetobacter_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_27 3514032 : 3572104 47 Planktothrix_phage(12.5%) tRNA,transposase NA
DBSCAN-SWA_28 4004317 : 4069229 60 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage