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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017123 Bordetella pertussis strain J153 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 31 0

Results visualization

1. NZ_CP017123
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017123_1 250588-250672 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017123_2 432030-432123 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017123_3 996348-996442 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017123_4 1819800-1819927 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017123_5 3431418-3431527 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 70036 42 Synechococcus_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 77634 : 136107 53 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225402 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,tRNA,protease NA
DBSCAN-SWA_4 233333 : 286921 48 Bacillus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_5 390853 : 448362 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589366 : 650558 55 uncultured_Mediterranean_phage(40.0%) transposase,protease NA
DBSCAN-SWA_7 655882 : 702073 50 uncultured_Caudovirales_phage(18.18%) transposase,tail,tRNA,terminase NA
DBSCAN-SWA_8 708239 : 762169 46 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_9 853047 : 913923 51 Vibrio_phage(25.0%) transposase NA
DBSCAN-SWA_10 934670 : 998263 58 Bacillus_virus(15.38%) transposase NA
DBSCAN-SWA_11 1024375 : 1082460 51 uncultured_Mediterranean_phage(37.5%) transposase,tRNA NA
DBSCAN-SWA_12 1086506 : 1158527 57 Planktothrix_phage(18.18%) holin,tRNA,transposase NA
DBSCAN-SWA_13 1176314 : 1236200 44 Bacillus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_14 1270675 : 1327885 50 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_15 1418118 : 1470271 44 Salmonella_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_16 1514196 : 1582281 57 Streptococcus_virus(11.11%) transposase,tRNA NA
DBSCAN-SWA_17 1618230 : 1682067 53 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_18 1831586 : 1890856 51 Klosneuvirus(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_19 1901096 : 1945419 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_20 2171087 : 2228366 49 Synechococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_21 2474949 : 2533192 52 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_22 2575470 : 2641970 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_23 2670085 : 2707497 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_24 2806624 : 2861141 48 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_25 2869166 : 2925950 41 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_26 2956336 : 3000027 40 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_27 3090636 : 3152472 60 Clostridium_phage(14.29%) transposase,tRNA,protease NA
DBSCAN-SWA_28 3381021 : 3445954 55 Staphylococcus_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_29 3463698 : 3516103 47 Acinetobacter_phage(37.5%) transposase,tRNA NA
DBSCAN-SWA_30 3533221 : 3587022 46 Catovirus(11.11%) transposase,tRNA NA
DBSCAN-SWA_31 4005434 : 4070346 59 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage