CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023316	Pseudomonas aeruginosa strain PPF-1 chromosome, complete genome	4 crisprs	csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL,TnsE_C	0	0	7	3

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023316_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023316_1

405301-405414

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023316_1

>merge|NZ_CP023316|1|405301-405414|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NZ_CP023316|1|1|405301-405414|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023316.1\|WP_003084271.1\|393190_393856_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP023316.1\|WP_004364975.1\|412243_412996_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_021263265.1\|410594_411206_-\|thiol-disulfide-isomerase	unknown	unknown	gnl\|CDD\|239267
NZ_CP023316.1\|WP_003112937.1\|395233_396610_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP023316.1\|WP_003112941.1\|408955_410008_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP023316.1\|WP_003084303.1\|403265_404420_+\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP023316.1\|WP_003112942.1\|409986_410490_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP023316.1\|WP_003111119.1\|392149_393028_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP023316.1\|WP_021263264.1\|411204_412224_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP023316.1\|WP_003084339.1\|415083_415776_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP023316.1\|WP_023100736.1\|406457_408845_-\|N-acylhomoserine-lactone-acylase-HacB	unknown	unknown	gnl\|CDD\|225241
NZ_CP023316.1\|WP_003084301.1\|402113_403211_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP023316.1\|WP_003084333.1\|414584_415079_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP023316.1\|WP_021263263.1\|413044_413743_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_CP023316.1\|WP_003084297.1\|399105_400476_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP023316.1\|WP_003084290.1\|397681_399040_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP023316.1\|WP_021263266.1\|396888_397641_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP023316.1\|WP_003084299.1\|400591_401695_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP023316.1\|WP_003084327.1\|413764_414319_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_023100735.1\|393916_394978_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377

Protein	Function_ID	Function_description	E-value
NZ_CP023316.1\|WP_003084271.1\|393190_393856_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.54898e-08
NZ_CP023316.1\|WP_021263265.1\|410594_411206_-\|thiol-disulfide-isomerase	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00343174
NZ_CP023316.1\|WP_003112937.1\|395233_396610_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP023316.1\|WP_003112941.1\|408955_410008_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NZ_CP023316.1\|WP_003084303.1\|403265_404420_+\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP023316.1\|WP_003111119.1\|392149_393028_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP023316.1\|WP_021263264.1\|411204_412224_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	2.87573e-56
NZ_CP023316.1\|WP_003084339.1\|415083_415776_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NZ_CP023316.1\|WP_023100736.1\|406457_408845_-\|N-acylhomoserine-lactone-acylase-HacB	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP023316.1\|WP_003084301.1\|402113_403211_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP023316.1\|WP_003084333.1\|414584_415079_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	1.65548e-66
NZ_CP023316.1\|WP_021263263.1\|413044_413743_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	2.52083e-77
NZ_CP023316.1\|WP_003084297.1\|399105_400476_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP023316.1\|WP_003084290.1\|397681_399040_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP023316.1\|WP_021263266.1\|396888_397641_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.85062e-107
NZ_CP023316.1\|WP_003084299.1\|400591_401695_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP023316.1\|WP_023100735.1\|393916_394978_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.86872e-164

>NZ_CP023316.1|WP_003084303.1|403265_404420_+|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP023316.1|WP_003084301.1|402113_403211_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP023316.1|WP_003084299.1|400591_401695_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP023316.1|WP_003084297.1|399105_400476_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP023316.1|WP_003084290.1|397681_399040_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP023316.1|WP_021263266.1|396888_397641_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVANGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACGKRAGQR
>NZ_CP023316.1|WP_003112937.1|395233_396610_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP023316.1|WP_023100735.1|393916_394978_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSVLLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLQPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEDGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASH
>NZ_CP023316.1|WP_003084271.1|393190_393856_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSIRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLTGFISDLNR
>NZ_CP023316.1|WP_003111119.1|392149_393028_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NZ_CP023316.1|WP_023100736.1|406457_408845_-|N-acylhomoserine-lactone-acylase-HacB
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARISQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGKWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWKGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAADADSPWWDDRRTERRETRADIVRAAWNASLAHLRSTLGNDPSGWLWGKAHTLTHEHALGQQALLKRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP023316.1|WP_003112941.1|408955_410008_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP023316.1|WP_003112942.1|409986_410490_-|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP023316.1|WP_021263265.1|410594_411206_-|thiol-disulfide-isomerase
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGPIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPEKG
>NZ_CP023316.1|WP_021263264.1|411204_412224_+|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADTAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFEGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_CP023316.1|WP_004364975.1|412243_412996_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPSGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP023316.1|WP_021263263.1|413044_413743_+|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRIRAVAGDLTPAAIGRGDGQVIREGIRGDLTQWLEPGESAACDEYLGVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVLFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP023316.1|WP_003084327.1|413764_414319_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP023316.1|WP_003084333.1|414584_415079_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGSRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP023316.1|WP_003084339.1|415083_415776_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023316_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023316_2

3461909-3462003

Orphan

Consensus_repeat	Method
GGCGGGGGAGATGGGAAGTGCGATCCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023316_2

>merge|NZ_CP023316|2|3461909-3462003|CRISPRCasFinder
GGCGGGGGAGATGGGAAGTGCGATCCTGCCAAGGATCCGAACAAGTGTCAGGGCAATGGCTCTGGTGGCGGGGGAGACGGGAAGTGCGATCCTGC

>NZ_CP023316|2|2|3461909-3462003|CRISPRCasFinder
GGCGGGGGAGATGGGAAGTGCGATCCTGC	CAAGGATCCGAACAAGTGTCAGGGCAATGGCTCTGGT
GGCGGGGGAGACGGGAAGTGCGATCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023316.1\|WP_010792965.1\|3467264_3467486_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_003144162.1\|3465004_3465361_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP023316.1\|WP_023101274.1\|3458562_3459795_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|177271
NZ_CP023316.1\|WP_003144162.1\|3458071_3458428_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP023316.1\|WP_021264777.1\|3455338_3455701_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274783
NZ_CP023316.1\|WP_031300851.1\|3456074_3457145_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293841
NZ_CP023316.1\|WP_003111050.1\|3468706_3469678_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271180
NZ_CP023316.1\|WP_003117250.1\|3454548_3455289_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP023316.1\|WP_023099133.1\|3460759_3460990_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_058011941.1\|3465495_3466749_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|177271
NZ_CP023316.1\|WP_019726183.1\|3457632_3457965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_023101275.1\|3460142_3460487_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375186
NZ_CP023316.1\|WP_023101277.1\|3462851_3464132_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283385
NZ_CP023316.1\|WP_003111049.1\|3469707_3470451_+\|phage-Gp37/Gp68-family-protein	unknown	unknown	gnl\|CDD\|377854
NZ_CP023316.1\|WP_159060630.1\|3455795_3456116_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_003131864.1\|3467524_3468526_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|378704
NZ_CP023316.1\|WP_021264778.1\|3453614_3454334_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP023316.1\|WP_010794183.1\|3466929_3467232_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_010792462.1\|3462522_3462834_+\|DUF2523-domain-containing-protein	unknown	unknown	gnl\|CDD\|371214
NZ_CP023316.1\|WP_019726183.1\|3464565_3464898_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023316.1\|WP_003144162.1\|3465004_3465361_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.5114e-15
NZ_CP023316.1\|WP_023101274.1\|3458562_3459795_+\|hypothetical-protein	gnl\|CDD\|177271	PHA00360, II, replication initiation protein.	7.86052e-99
NZ_CP023316.1\|WP_003144162.1\|3458071_3458428_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.5114e-15
NZ_CP023316.1\|WP_021264777.1\|3455338_3455701_-\|hypothetical-protein	gnl\|CDD\|274783	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein. A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the pfam00691 domain family, which is the peptidoglycan-associated region of flagellar motor protein MotB, OmpA (whose N-terminal region forms an outer membrane beta barrel), and peptidoglycan-associated lipoprotein Pal. Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein. [Protein fate, Protein and peptide secretion and trafficking].	0.00222069
NZ_CP023316.1\|WP_031300851.1\|3456074_3457145_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293841	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain. Derepression of the romA-ramA locus results in a multidrug-resistance phenotype. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.14332e-76
NZ_CP023316.1\|WP_003117250.1\|3454548_3455289_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	4.20827e-48
NZ_CP023316.1\|WP_058011941.1\|3465495_3466749_+\|replication-initiation-protein	gnl\|CDD\|177271	PHA00360, II, replication initiation protein.	7.38463e-97
NZ_CP023316.1\|WP_023101275.1\|3460142_3460487_+\|hypothetical-protein	gnl\|CDD\|375186	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P. This domain family is found in Gammaproteobacterial proteins. Members of the family are predicted to be G5P DNA binding proteins. Homologous proteins are found in pfam02303.	0.00081908
NZ_CP023316.1\|WP_023101277.1\|3462851_3464132_+\|hypothetical-protein	gnl\|CDD\|283385	pfam05707, Zot, Zonular occludens toxin (Zot). This family consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophages present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.	2.88442e-19
NZ_CP023316.1\|WP_003111049.1\|3469707_3470451_+\|phage-Gp37/Gp68-family-protein	gnl\|CDD\|377854	pfam07505, DUF5131, Protein of unknown function (DUF5131). This is a family of bacterial and phage proteins of unknown function. There are three highly conserved cysteine residues in the disposition, Cx6Cxxc, amongst many highly conserved residues.	1.54962e-162
NZ_CP023316.1\|WP_003131864.1\|3467524_3468526_-\|DNA-binding-protein	gnl\|CDD\|378704	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term. The broad host-range plasmid RK2 is able to replicate in and be inherited in a stable manner in diverse Gram-negative bacterial species. It encodes a number of co-ordinately regulated operons including a central control korF1 operon that represses the kfrA operon. The KfrA polypeptide is a site-specific DNA-binding protein whose operator overlaps the kfrA promoter. The N-terminus, containing an helix-turn-helix motif, is essential for function. Downstream from this family is an extended coiled-coil domain containing a heptad repeat segment which is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning.	1.21143e-11
NZ_CP023316.1\|WP_021264778.1\|3453614_3454334_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	3.86129e-91
NZ_CP023316.1\|WP_010792462.1\|3462522_3462834_+\|DUF2523-domain-containing-protein	gnl\|CDD\|371214	pfam10734, DUF2523, Protein of unknown function (DUF2523). This is a family of phage related proteins whose function is uncharacterized.	1.55355e-11
NZ_CP023316.1\|WP_003111050.1\|3468706_3469678_+\|site-specific-integrase	gnl\|CDD\|271180	cd00799, INT_Cre_C, C-terminal catalytic domain of Cre recombinase (also called integrase). Cre-like recombinases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre recombinase maintains the circular phage replicon in a monomeric state by catalyzing a site-specific recombination between two loxP sites. The catalytic core domain of Cre recombinase is linked to a more divergent helical N-terminal domain, which interacts primarily with the DNA major groove proximal to the crossover region.	7.80023e-56

>NZ_CP023316.1|WP_023099133.1|3460759_3460990_+|hypothetical-protein
MKQLKQLFSLGKREAVIGGSLLMASGLSMAAEGDIDTTKALAYIAGGLAAAAAVTGAMFGLVALIGAAKKAMRAGT
>NZ_CP023316.1|WP_023101275.1|3460142_3460487_+|hypothetical-protein
MLALIGLCQGYYPETRTINGQNGQTQITEHYVLVQVEHSTKFGISENKVIQVRISKRHMDGGLNNVWKMEKGKTVSVPVFIQAWASKSGNAGFDYWLSGDGMPLKLQAVQEKAA
>NZ_CP023316.1|WP_023101274.1|3458562_3459795_+|hypothetical-protein
MLDKLHLFVPFRLEHIELLGVEGRADPVHVVDLESLGVPLQGQISRGEGGELQADYLRHTWESLSTGFTPLAFKVFHQSLGKRLMPGVELKASPAKLLQGHNVFGPTCIQKGAEVMFKWLAGSYPDLFAKLDVSATQVYTLDCTYSSRLPDERTALQVIQALTNVSNGHTKSRGDNYQTSAYWGAKESRLKRLKAYLKHTEFQAQLDELKRAGRADLSAARSARVMSDPRLQEWVRYLLRMEATVMHRWLERRGIPSRLVDLIAYQQRLQEEGRCLIQECWQAVTADLFAAFEGIQMRVIDDEKVLAALTERHLKYDRKGKPNDSHARNLFRTYRSLKDYGWQETMDSMSRPTFYRHIKEICEAGLSKAALQKLHEADRANNVVPLLRFVQVDFSAQRPDWYVEPTVEAA
>NZ_CP023316.1|WP_003144162.1|3458071_3458428_-|helix-turn-helix-domain-containing-protein
MSTTNQERAMTIALNLKRFREAKKLTQREVWEAAGISKSSYTSYEAGRSDPTGEIIVRLAKALGVSTDELLLTEQERTVSEDLAPILRRFDALPPDIRNQARIALKGVLFGYEQEALR
>NZ_CP023316.1|WP_019726183.1|3457632_3457965_-|hypothetical-protein
MKRIFLLPLLPLALGAATVDKTQAMAKAIQAKDDQEALEWCKKAAPNDYQWILEQCMQIRADSISQADDMVLQEKLMKRLNEIEQTLTQYPETERRKLALEQLQREAQTP
>NZ_CP023316.1|WP_031300851.1|3456074_3457145_+|MBL-fold-metallo-hydrolase
MKLPSIRRAAIGGHHDSPQLRQGRFHNLSPRPADMPAPGARVLWNALFNKPRSTVPRQPLPVLSPSRAELDATVDGSLFRLGHSTLLLKLAGSWWLTDPVFSERASPLPFAGPKRFHAPPVALADLPPIRGVILSHDHYDHLDRAAIKALVPLVELFLAPLGVGDRLLAWGVPPGKVRQLDWWQGIEAGGLRLTATPAQHFSGRGLHDGNRTLWCSWVIESVELKLFFSGDSGYFDGFAEIGRRYGPFDLTMLETGAYNEHWPYVHMHPQQTLQAHRDLGGRWLLPIHNGTFDLAMHAWYEPFERILELATEHGVRVSTPMMGERIDLQAPHAGRRWWREVVDSETQVQSYGCCRS
>NZ_CP023316.1|WP_159060630.1|3455795_3456116_-|hypothetical-protein
MSADGGSPYRGKFQSVIIPVWHFDNRSAAAGIRSRSLLGILPSSSLPIPRESLPDRAGLLKRSNTPLAPIIERHRRGRSEAPEAVIGAESNRLHAGHYDRKKTVSI
>NZ_CP023316.1|WP_021264777.1|3455338_3455701_-|hypothetical-protein
MKRMLPLIALALATTTPLAHSAEVISADRDRTVGYGAGGVVGVMVGAALGGPLGAIAGAALGALGGASVQQATGLSENAYTVRYEDGTTERFRSPNARFDAGDQVQVQGIRLIPAPSLSR
>NZ_CP023316.1|WP_003117250.1|3454548_3455289_-|SDR-family-oxidoreductase
MSEFNDRFAVVTGASSGIGLKLTETLLGHGATVLAMARREGPPESLHAHSGKRLHWLAGDVTRERDLDALASRAASIGPVDYLVPNAGIAQLADGLDSLAFEQQWRVNGAGALNTFSVLSRQTSKPASVVFIGTFLSQVTFPGLAAYIASKAALIAQARTLAVEWAEKGVRINLVSPGPTATPIWASLGLSDAQAESVTRSINQRLVDGSFLSPGEIVDVVMFLLSSKSAGLYGQELIVDKGYGLR
>NZ_CP023316.1|WP_021264778.1|3453614_3454334_-|MOSC-domain-containing-protein
MPLPALPLDALLTGRARPFTRPGSRSGIAKSPRDGALRVTPVGLEGDEQGDLRVHGGVEKAIHHYPREHYAAWIAELGEHPLLMQAGAFGENFSTSGWSEADVCLGDRVRAGTALLEVSQGRMPCWKLNDRFEVAGMSLRVQESGRTGWYYRVLEEGVVAAGDILQLVERRHPDWSLLRLSVVLFDRRADAELLRQCLALPLTPSWRRTLERRLEKGQVEDWGPRLEGAPSQAETPRPT
>NZ_CP023316.1|WP_010792462.1|3462522_3462834_+|DUF2523-domain-containing-protein
MPLLIGVLLRAIGWSLIPLGWKLLRGLGFTAVAFVGVKAVMDQAKDYVFSSLGGVPAQWLQVLGLLQVDVCINILFSAYIARAVLWGMDKSGGKSGMRWTGPK
>NZ_CP023316.1|WP_023101277.1|3462851_3464132_+|hypothetical-protein
MLYLRTGLPGAGKTLNAIREIDIEHQPDPDDPAKRLHKDPDNPDLPPRTIYYYGIPDMKLDRLKSKWVEFDTPEEWYNLPDGSVIVIDEAQRVFGNDGTRARPEKVTRFETHRHQGLDIHLITQHPSLLCTPVRKLVGKHINFIRPYGREKGIFRHEYEFCIDNPERRSNFKQAQEERVTLDKAYFGVYKSSTVHTHKPITPSYMKKIPLIIVLMLIPIGVLVGLVVTAMRQGNEEKEAALARSQATEASAGVLPGAGNAVQAAPRASSGAKSADEFIGDMSPRVPDLVASAPRYDDLNKPRDFPRPVCAASSDPNLIGKAPERRIPLGTYNGRVMVCQCYTQQVTRMHTTFEFCMDVVNNGYFDDTRMPPTYASGNSTRGLITSPSVDPATAIERGRAATSPTPGDAFSTRVTIVPDSSRMPRTL
>NZ_CP023316.1|WP_019726183.1|3464565_3464898_-|hypothetical-protein
MKRIFLLPLLPLALGAATVDKTQAMAKAIQAKDDQEALEWCKKAAPNDYQWILEQCMQIRADSISQADDMVLQEKLMKRLNEIEQTLTQYPETERRKLALEQLQREAQTP
>NZ_CP023316.1|WP_003144162.1|3465004_3465361_-|helix-turn-helix-domain-containing-protein
MSTTNQERAMTIALNLKRFREAKKLTQREVWEAAGISKSSYTSYEAGRSDPTGEIIVRLAKALGVSTDELLLTEQERTVSEDLAPILRRFDALPPDIRNQARIALKGVLFGYEQEALR
>NZ_CP023316.1|WP_058011941.1|3465495_3466749_+|replication-initiation-protein
MLDKLHLFVPFRLEHIELLGVEGRADPVHVVDLESLGVPLQGQISRGEGGELQADYLRHTWESLSTGFTPLAFKVFHQSLGKRLMPGVELKASPAKLLQGHNVFGPTCIQKGAEVMFKWLAGSYPDLFAKLDVSATQVYTLDCTYSSRLPDERTALQVIQALTNVSNGHTKSRGDNYQTSAYWGAKESRLKRLKAYLKHTEFQAQLDELKRAGRADLSAARSARVMSDPRLQEWVRYLLRMEATVMHRWLERRGIPSRLVDLIAYQQRLQEEGRCLIQECWQAVTADLFAAFEGIQMRVIDDEKVLAALTERHLKYDRKGKPNDSHARNLFRTYRSLKDYGWQETMDSMSRPTFYRHIKEICEAGLSKAALQKLHEADRANNVVPLLRFVQVDFSAQRPDWYVGACRDKGEIHSFGL
>NZ_CP023316.1|WP_010794183.1|3466929_3467232_+|hypothetical-protein
MEHTAAQPVETVVDITCDVCRQSTSVEGYGQQFGTLQAHWGYGSKHDGERYKVHLCELWFFRTLSGLRRERMVNAMFDEEPDSTKDEFGLVRRDEFWGDG
>NZ_CP023316.1|WP_010792965.1|3467264_3467486_-|hypothetical-protein
MTLPYERTRSVVQAQEFLVELSRDTTLSESIRNEARRLLCHYPSKGDMLQAGRNEEQAAGSIFEPVFSSSIED
>NZ_CP023316.1|WP_003131864.1|3467524_3468526_-|DNA-binding-protein
MARGGINKALVQKARQAILARGENPSIDAIRVELGNTGSKTTIHRYLKELEDADRGRNAAALPLSEQLANLVAQLADQLKEEAQADMAQEREQLARERLDYQNQIRQAESRIQQLEGQRAGLTEQFQAAQQALLQEQQLRQQAEVENARLQQANHDQEARLQDRDGQIRSLEDKHQHARDALEHYRQASKEQREQEQRRHESQVQQLQLELRQLQQTLIVKQDELTHLNRDNARLLAEARQQQKDQHAQQKLLTQKAQALEVAQNTLTSIVRTNEALEQRCHALQDEVTRLGEASSIQAQQTQSLQERLAKATAQLKLLGQAPPTSSGGASSS
>NZ_CP023316.1|WP_003111050.1|3468706_3469678_+|site-specific-integrase
MKDVERYLQAGTRENTRRSYQSAVEHFEVTWGGFLPATSDSIVRYLVDYADTLSLNTLKQRLAALAQWHIRHGFPDPTKTPTVHQVLKGIRTLHPSQTKQAAPLQLQHLEHAVEWLEQEAMCLFQAEDLAGYLRCRRDTALLLIGFWRGFRSDELCRLQVEHIQAEAGAGMTLFLPWSKGDRDNLGTTHYVPALRRLCPVQAYLDWIGAAGIARGMVFRRLDRWGNLNEAGLNPGSLIVLLRQILQRAGIQADLYTSHSLRRGFATWATANGWDIKALMTYVGWKDIKSAMRYIDPAISFGGLAARPALELNASTLTQVPASH
>NZ_CP023316.1|WP_003111049.1|3469707_3470451_+|phage-Gp37/Gp68-family-protein
MSTQTSIEWTEMTWNPVVGCTKVSPGCKHCYAENMARRLQAMGTPGYENGFRLSLRPEKLQEPLQRKKPTIYFVNSMSDLFHEQVPDTYIDQVFAVIHQASQHTFQILTKRAERLADYFSQRTPPANAWLGVSVEDREYGVPRIDCLRGINAAIRFLSAEPLLEDLGELNLTDIHWVIVGGESGAKARPMKQEWVDNIHRQCDAFGAAFFFKQWGGWGSDGVKRSKKANGRLLKGQTWDEIPLLTLA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023316_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023316_3

3482653-3482747

Orphan

Consensus_repeat	Method
GGCGGGGGAGATGGGAAGTGCGATCCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023316_3

>merge|NZ_CP023316|3|3482653-3482747|CRISPRCasFinder
GGCGGGGGAGATGGGAAGTGCGATCCTGCCAAGGATCCGAACAAGTGTCAGGGCAATGGCTCTGGTGGCGGGGGAGACGGGAAGTGCGATCCTGC

>NZ_CP023316|3|3|3482653-3482747|CRISPRCasFinder
GGCGGGGGAGATGGGAAGTGCGATCCTGC	CAAGGATCCGAACAAGTGTCAGGGCAATGGCTCTGGT
GGCGGGGGAGACGGGAAGTGCGATCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023316.1\|WP_003111047.1\|3472200_3473610_+\|homospermidine-synthase	unknown	unknown	gnl\|CDD\|227626
NZ_CP023316.1\|WP_058011884.1\|3474232_3475249_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP023316.1\|WP_003120172.1\|3475451_3476357_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|225308
NZ_CP023316.1\|WP_023099592.1\|3485044_3486124_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143587
NZ_CP023316.1\|WP_003111043.1\|3476998_3477361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_010792462.1\|3483266_3483578_+\|DUF2523-domain-containing-protein	unknown	unknown	gnl\|CDD\|371214
NZ_CP023316.1\|WP_023101275.1\|3480886_3481231_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375186
NZ_CP023316.1\|WP_003120171.1\|3476364_3476829_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023316.1\|WP_003144178.1\|3493282_3494869_-\|DUF1302-domain-containing-protein	unknown	unknown	gnl\|CDD\|377751
NZ_CP023316.1\|WP_003089182.1\|3494952_3496377_-\|DUF1329-domain-containing-protein	unknown	unknown	gnl\|CDD\|377764
NZ_CP023316.1\|WP_003120170.1\|3477357_3480372_-\|Tn3-family-transposase	unknown	unknown	gnl\|CDD\|376561
NZ_CP023316.1\|WP_044727193.1\|3490871_3493274_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|223964
NZ_CP023316.1\|WP_179295303.1\|3473625_3474198_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_021264772.1\|3489898_3490861_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226855
NZ_CP023316.1\|WP_003131866.1\|3470472_3471789_+\|three-Cys-motif-partner-protein-TcmP	unknown	unknown	gnl\|CDD\|275267
NZ_CP023316.1\|WP_023101277.1\|3483595_3484876_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283385
NZ_CP023316.1\|WP_003122765.1\|3486889_3487432_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_003089190.1\|3488947_3489814_+\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_CP023316.1\|WP_023099133.1\|3481503_3481734_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_178383516.1\|3487454_3488708_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225306

Protein	Function_ID	Function_description	E-value
NZ_CP023316.1\|WP_003111047.1\|3472200_3473610_+\|homospermidine-synthase	gnl\|CDD\|227626	COG5310, COG5310, Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism].	2.84624e-166
NZ_CP023316.1\|WP_058011884.1\|3474232_3475249_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.22233e-102
NZ_CP023316.1\|WP_003120172.1\|3475451_3476357_+\|EamA-family-transporter	gnl\|CDD\|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	1.90259e-05
NZ_CP023316.1\|WP_023099592.1\|3485044_3486124_+\|hypothetical-protein	gnl\|CDD\|143587	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and co-enzyme metabolism, in detoxifying small molecules, in the synthesis of signaling molecules, and in the post-translational modification of proteins. They are used industrially, as biocatalysts in the fine chemical and pharmaceutical industry, in cyanide remediation, and in the treatment of toxic effluent. This superfamily has been classified previously in the literature, based on global and structure-based sequence analysis, into thirteen different enzyme classes (referred to as 1-13). This hierarchy includes those thirteen classes and a few additional subfamilies. A putative distant relative, the plasmid-borne TraB family, has not been included in the hierarchy.	0.000305911
NZ_CP023316.1\|WP_010792462.1\|3483266_3483578_+\|DUF2523-domain-containing-protein	gnl\|CDD\|371214	pfam10734, DUF2523, Protein of unknown function (DUF2523). This is a family of phage related proteins whose function is uncharacterized.	1.55355e-11
NZ_CP023316.1\|WP_023101277.1\|3483595_3484876_+\|hypothetical-protein	gnl\|CDD\|283385	pfam05707, Zot, Zonular occludens toxin (Zot). This family consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophages present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.	2.88442e-19
NZ_CP023316.1\|WP_003120171.1\|3476364_3476829_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.01189e-15
NZ_CP023316.1\|WP_003144178.1\|3493282_3494869_-\|DUF1302-domain-containing-protein	gnl\|CDD\|377751	pfam06980, DUF1302, Protein of unknown function (DUF1302). This family contains a number of hypothetical bacterial proteins of unknown function that are approximately 600 residues long. Most family members seem to be from Pseudomonas.	7.84574e-169
NZ_CP023316.1\|WP_003089182.1\|3494952_3496377_-\|DUF1329-domain-containing-protein	gnl\|CDD\|377764	pfam07044, DUF1329, Protein of unknown function (DUF1329). This family consists of several hypothetical bacterial proteins of around 475 residues in length. The majority of family members are from Pseudomonas species but the family also contains sequences from Shewanella oneidensis and Thauera aromatica.	1.37405e-153
NZ_CP023316.1\|WP_003120170.1\|3477357_3480372_-\|Tn3-family-transposase	gnl\|CDD\|376561	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases.	2.73623e-176
NZ_CP023316.1\|WP_044727193.1\|3490871_3493274_-\|MMPL-family-transporter	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	1.58073e-71
NZ_CP023316.1\|WP_003131866.1\|3470472_3471789_+\|three-Cys-motif-partner-protein-TcmP	gnl\|CDD\|275267	TIGR04474, conserved_hypothetical_protein, three-Cys-motif partner protein. Members of this family occur regularly as a partner to as a member of family pfam07505, which has been called a phage protein but which seems to occur also in other contexts. Members average about 400 residues in length, but the conserved region covered by the model averages 260 residues and excludes the C-terminus. Conserved motifs suggest enzymatic activity. Note that its frequent partner protein (see pfam07505) has a three-cysteine motif that resembles the Cx3CxxC motif of radical SAM proteins, and that in one branch (see TIGR04471) actually becomes Cx3CxxC. We suggest the name three-Cys-motif partner protein (tcmP), and renaming pfam07505 to three-Cys-motif family protein.	1.9909e-85
NZ_CP023316.1\|WP_023101275.1\|3480886_3481231_+\|hypothetical-protein	gnl\|CDD\|375186	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P. This domain family is found in Gammaproteobacterial proteins. Members of the family are predicted to be G5P DNA binding proteins. Homologous proteins are found in pfam02303.	0.00081908
NZ_CP023316.1\|WP_003089190.1\|3488947_3489814_+\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	7.70325e-44
NZ_CP023316.1\|WP_021264772.1\|3489898_3490861_-\|hypothetical-protein	gnl\|CDD\|226855	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only].	2.73815e-18
NZ_CP023316.1\|WP_178383516.1\|3487454_3488708_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	3.65653e-25

>NZ_CP023316.1|WP_023099133.1|3481503_3481734_+|hypothetical-protein
MKQLKQLFSLGKREAVIGGSLLMASGLSMAAEGDIDTTKALAYIAGGLAAAAAVTGAMFGLVALIGAAKKAMRAGT
>NZ_CP023316.1|WP_023101275.1|3480886_3481231_+|hypothetical-protein
MLALIGLCQGYYPETRTINGQNGQTQITEHYVLVQVEHSTKFGISENKVIQVRISKRHMDGGLNNVWKMEKGKTVSVPVFIQAWASKSGNAGFDYWLSGDGMPLKLQAVQEKAA
>NZ_CP023316.1|WP_003120170.1|3477357_3480372_-|Tn3-family-transposase
MASLERTAYPVLSRSYSRAELQREFSFSEEEVTWVKSRSNAAFRLNLAVLFKTFQVLRYFPEIAEVPEPVVDFIRTQIGLRSKVALSPYKWMQLYRHMSAVREKLGVRPFYGSDGQDIASTHAQLMAPLLEQRADIINAIIDELLRQNYELPAYSTLNDLAEAARAEAQEKIFNLVVARAPIKVIYKLRDLLDTDFGRRQSDLNTLKQAPKKPSRKHLEVLIDHLAWLESFGKLDAIFDGIVDTKIRHFAAQAAASDVSELKDCSLPKRYTLMLALIYRMRVRTRDHLAEMFIRRISTIHKRAKEELEQIQARQRQKLEQLAATLDGVVQILVQEPDDQEAGSLIREYLSPDGNMDRLREVCAEVQATGGNNYLPLIWRHFKSHRSLLFRLSHLLQLEPTTQDRSLIQALQLIQDSENLHREWIDEHVDLSFASDRWVKIVRRPTSEGPPTNRRYLEVCVFSYLASELRSGDLCVQGSESFADYRKQLLPWEECLQRLPAYCEKVGLPTTAKEFVASLKSQLEETAQQLDDKFPSCRGDVSINDAGEPVLRRVMARDIPPSAISLQTALMQRMPARHVLDIMANIEHWIQFTRHFGPMSGNEPKLKEPAERYLMTIFAMGCNLGPSQAARHLAGNVTPHMLSYTNRRHLSLEKLDKANRELVELYLQLDLPKLWGDGKAVAADGTQFDFYDDNLLAGYHFRYRKMGAVAYRHVANNYIAVFQHFIPPGIWEAIYVIEGLLKVSLSVEPDTVYSDTQGQSATVFAFTHLLGINLMPRIRNWRDLVMCRPDRGVSYKHINRLFTDTADWHLIETHWQDLMQIALSIQAGKISSPMLLRKLGSYSRRNKLYLAAQTLGSVIRTIFLLNWIGSRELRQEVTANTNKIESYNGFSKWLSFGGDVIAENDPDEQQKRLRYNDMVASSVILQNTVDMMRILQKLAREGWQFTDEDVSFLSPYLTSNVKRFGEFNLKLNRPPEPWIKDSVFQQAAGSLRVNSTSKAAAEEAI
>NZ_CP023316.1|WP_003111043.1|3476998_3477361_-|hypothetical-protein
MIEIASASFRVTPYGEVDIAALDRMRAGFDTSQLLRLVEGLDACLSEMGGITALRDELLKLHAMALTIVEGTAPAAPTENACIWAEAESVQLGLEALATWIRSAQGFLTPLTSLEPEHQQ
>NZ_CP023316.1|WP_003120171.1|3476364_3476829_+|GNAT-family-N-acetyltransferase
MSKNSNIKLISASIDDELLLVELMKKYHLYDGIEMTDEDRLAALRPLLSSSEKGNVWIICLGSKQIGYIATCNCYSIEFRGIEVWIDEFYIDEQCRGQGFGSEILEKVKSFLKSQGAAIVHLEVDENNPKAVSLYKKSGFEFRERFVMMSHSLK
>NZ_CP023316.1|WP_003120172.1|3475451_3476357_+|EamA-family-transporter
MTWLVMALMAPLLWSLSNILDKLAVIHHANHWTTFIFLLSIGNLLYSALIFLLFTPSDFDTTSALLNLLSGLCIFGMYFLYAMPLKSVDISTAIALHQLTPLLVLVVSILLLGYSPTGIELLGIALVFVGVYFAVAIGKGRPGSISLSAVLLLIGSAVFGAVATLLYDHLLLSHSLPSVLMFNYAGYGLGGTLMLLVPKWRHSIAKDVSEMPPKGWAVYALSNLFDAGGYALFIGALSAGGNVAVVSVLVSLHPVYVLALSHWLAIVDPKILSENFSSSDAYKRMSAIVVIVAGVIMMTKI
>NZ_CP023316.1|WP_058011884.1|3474232_3475249_+|IS30-family-transposase
MSYHELSLEERSNIQVGLLRGMSQRAIARMLNRSPSTICREIRRNRGAQGEYITQHAQRATCERRMPCRPQKKLMPGTELLDLVVYLLRKRFSPEQIAGKLRAMEFPNFEDAYVCRETIYNAIYALPVGELRKELIICLRQGKTSRRPRSGGVDRRGQIPDMVSIHVRPPEIEDRVMPGHWEGDLIKGKANASAVGTLVERSSGYLMLVKMLDATATSAVEGFSAALNRMPLAARKSMTYDQGREMARHTEITQKTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSVYSQEQLDAIAYELNIRPRKRFGFRCPIEVMTELMATYHEAPASIQ
>NZ_CP023316.1|WP_179295303.1|3473625_3474198_+|hypothetical-protein
MSNVKSGIGLKSYEWSSLELLKGLSIEQIKSNPSKLEERRPFFWHDMSSEFDSINFLRYLFGRRDIQFSNEFIEFVCLWHLDEQNHYRGLRKINSVLYSMPEDMIDREIRSNSPDFSHIEDFMKDEFTILLSIAFDEVTSTRAYKQDVSFFDSFENESLSTWIRYAARDEAAHYGNAMKILRLNHGGRKN
>NZ_CP023316.1|WP_003111047.1|3472200_3473610_+|homospermidine-synthase
MDFSINPPQRIVFVGLGTIAQSFLPLLSKVHDLSTLEIYAIDPKTPPLIEYFANSFGLKFINSAIDQINYRDILVPILGEGTVLINLSTDVSSLALIELCRSAGALYLDTCIEPWKGGYDDPTIPLHKRTNYHLREQMLSLKKRLGSGVTALVAHGANPGLVSHFVKRALLDLAEEILGDCKKPSNKEQWAILSQRLGVKVIHVAEYDSQISQKSRERGEFVNTWSVHGFISESQQPAELGWGSHERSLPTDASMHTDGCGAAIYIEKPGASVRVKTWTPFNGPSLGYLVTHHEAISIADFLTLRTADETYRPTVHYAYRPSDEAILSVHEWFGNDCMTPEKTKVLRPGDILSGSDYLGVLLMGHEKSSYWYGSILSIEKAKELATLNTATTLQVAAGVLSGYLWILSHPSAGIIEAEDMDHEVALSYISQYLGELKGVYSDWNPTKNNPGTFSAIDSDSPWLFSNFVL
>NZ_CP023316.1|WP_003131866.1|3470472_3471789_+|three-Cys-motif-partner-protein-TcmP
MAKDDEKYRWDWATQTFPTIDPHSKIKHQIIDDYIQAYIDVLMRNQQMPLLGLSIVDGFSGGGIYNDSAGGHHFGSPVIALEAIQESEVRNNVGRIKYRPICSQHHFVDVKPKNTACLHAVLASRGHQARIGQDIHLHTAEFTKALPAIAQSLKAFGKSERVLFLLDQYGYGDVPFGQIKWIFQHLSNAEVLLTFNVDFLITYLADRHANRKAIASIGLEQYVPWEQLRHLKAHSSQDWQYLIQRYLSDGIKQESGAQFMTVFFIRPHGTNPMAYWFIHLANSYRANDVMKAIHWKYGNNFSHLLSPSCFFGYDANRDVGVTGQPDLLCEGEHQFDQVTDTRIRGELSELLPKQVFEVERRPFIQLMTELTNFTMADESRVKLALDVAVANGDIQAVDKEGKSRRRKGTSIKSTDILIAPPQKTFFFFPQQKKTSRDT
>NZ_CP023316.1|WP_010792462.1|3483266_3483578_+|DUF2523-domain-containing-protein
MPLLIGVLLRAIGWSLIPLGWKLLRGLGFTAVAFVGVKAVMDQAKDYVFSSLGGVPAQWLQVLGLLQVDVCINILFSAYIARAVLWGMDKSGGKSGMRWTGPK
>NZ_CP023316.1|WP_023101277.1|3483595_3484876_+|hypothetical-protein
MLYLRTGLPGAGKTLNAIREIDIEHQPDPDDPAKRLHKDPDNPDLPPRTIYYYGIPDMKLDRLKSKWVEFDTPEEWYNLPDGSVIVIDEAQRVFGNDGTRARPEKVTRFETHRHQGLDIHLITQHPSLLCTPVRKLVGKHINFIRPYGREKGIFRHEYEFCIDNPERRSNFKQAQEERVTLDKAYFGVYKSSTVHTHKPITPSYMKKIPLIIVLMLIPIGVLVGLVVTAMRQGNEEKEAALARSQATEASAGVLPGAGNAVQAAPRASSGAKSADEFIGDMSPRVPDLVASAPRYDDLNKPRDFPRPVCAASSDPNLIGKAPERRIPLGTYNGRVMVCQCYTQQVTRMHTTFEFCMDVVNNGYFDDTRMPPTYASGNSTRGLITSPSVDPATAIERGRAATSPTPGDAFSTRVTIVPDSSRMPRTL
>NZ_CP023316.1|WP_023099592.1|3485044_3486124_+|hypothetical-protein
MPKLIVAIWSVNTKNHAATPDARFASLTVAIQSAWTTMMTLADGETVSYLGAQPHAITPQSVSVHTARNESVNYLFIAPEYLFTANKDIPSHFMTETQFELIRAQLVFLSLRFPNLMIIPGSAGWFKTRMRSAVKIFRKSLAQPQRERGPEASRDMNKYLERYQRSIDTPLDYRGVVPDLHLSSYTNQYKDLKYGQIYDLEQASPKSGQHAAGLKIAKNTCLVLKSATIIHRYDKIFEAQDSTDTDMSKADRQEPFLFMPGEASPIFESAGIKYGVELCVDHNFAALQVWCKKICHPPSPVDIQILMSASTGLESSNIAATQFVLHADCHGASVIKANGEDVSPARSAAEDLPVYVLEW
>NZ_CP023316.1|WP_003122765.1|3486889_3487432_+|hypothetical-protein
MSPSPSPDERRLVFEARRLTIEALVKIYLEQVSSSRNLVTVYLRLMFTLSLGALAGVITLYGTMLRFGTSASISMITPLEVVLAIAALAALVTSALLSARALQKSAFDVAPLLHNPFPSADSVIDSIFDADDIDERQILRKLYFALDKTVEHQPPLRLSTRLITLFLIGGLFLTGASFLL
>NZ_CP023316.1|WP_178383516.1|3487454_3488708_-|helix-turn-helix-domain-containing-protein
MTSTPSSWPRPSEAVRELMRKGAELAQALPPEWVERLNQALFSSPEDAKLLEDPVILAACRRANRAELLHWANANLQRPGEPVQPYVSADMVDTARELARRGLSELLMNVARSTQNTAWELWMKMAFNLTQDPRVLEEFLEVSSRSISEFIDSNMRVVTQIILEEKSAQAHDDPIDKRSLVSRLLDGRDVDTEQFGRRLGYSLFQKHYAGLVWCESPDAEIRLLEDVARTLAQLTGTAAPLIVFAGPATLWVWSHAAKPLDLNLLQGIALRFSGIRAAIGSPGTGVNGFRRSHLEALTTQRLMGRLAGAPAVATIDQVRMVSLMTQDDRAARQFVLSTLGRLATEPSVLQRSLHAFLANGCNVTQTAEALGTHRNTLLRRLERAQDLLPVRLADHRIQIAAALELVIWSTPLIDDDK
>NZ_CP023316.1|WP_003089190.1|3488947_3489814_+|phytanoyl-CoA-dioxygenase-family-protein
MSASRDTFSLPVVTRSTPAQEIALLSDQAGAVIIRNFMTPEQVARINNELDAPLAALEAGSKHQHELIAEFHGRQTKRLTNLVTHSKTFREEILDDDLFHDLGNVLYAAECGDWWLTTAQLIEIGPGNKAQMLHRDMAQYQPFVAMNKHAPRTITNLMLALTDFTEENGATRLIPGSQDWDDFDDVGTPEMTIPALLKAGDAVLFGGKVVHGGGANVTADFYRRGLTIPMQASIITPEEAYPLIVPLELVRTLAPRVQKILGFRSQYPNGSPGLWQHNYADLADYLQL
>NZ_CP023316.1|WP_021264772.1|3489898_3490861_-|hypothetical-protein
MKFRVSFTAALLAAGLPLMSLQAAPLQAVPAVQAGNATQATMLAAGWAGERVVAVGDHGVVLLSDDQGRQWRQARSVPLSTPLTGVSFVDARHGWAVGHWGAILSTADGGESWQVQRLSSEEDRPLFAVHFFDARQGVAVGLWSLVLTTEDGGKTWTEQPLQAPSGAKRADLNLMGLFADNHSSLYATAEHGQVLRSDDQGKNWRYLDTGYEGTLWSGAVLADGRLLLGGQRGTLLQGSADGKAFRRVPTQGKGSVTSIAVAGARVLAVGLDGLKVRSRDGGNSFQEAPTADGLSLTAALFNADGTPLLFSRRGVMPRQE
>NZ_CP023316.1|WP_044727193.1|3490871_3493274_-|MMPL-family-transporter
MNGSVKLPEAPTRGLLSYVEGVLFRHRRLVLASLAVFTLIMGWFAVQLRMDAGFEKQLPVGHEYIETFEAYRNDLLGANRLTIVVKAREGDIWSAPGLKRLYDVTQAVTFLPGVSRSSVRSLWTPNAFVNEITEEGFRADPLVPGTVSSEHLDDRIIAKIANSTAQGGFIGTLVSRDQSSAMITVELNEYDSQGAHLDYVTFNHRLEKEIRQRFEDGDFEIQIIGFAKQIGDIADGASAVLEFCLLALLLTAGAVYWYCHSLRFTLLALVCSLASLVWQFGSLRLLGYGLDPLAVLVPFLVFAIGVSHGVQQINFIVREIAIGKSAEEAARSSFTGLLVPGTLALVTALVSFVTLLLIPIPMVRELAITASLGVAYKIVTNLVMLPLMASLLRVDDKYAAAQEVSRQRRSRWLRGLARLAEPRKAQWVLGAALAVFLAAIWQSHDRVVGTLQAGAPELREDSRFNRDAVSIASNYDIGLDWLSVVFEVDKAPSEVACEDVALGQYQDRFVWAMQGVPGVLSVASFSTTMRQFNEGYNEGNPKMAAVPIDPMNYAALATEVARTPGLMRIDCSMSAVHLYLADHKATTINRVVDAAKAFRSEYPMSGISIRLASGNAGVLAAINEEVEKSETPMLLYVYAAIALLVFVVYRDLRAVLVCCLPLTIGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVDYAFYIYNRLQLHLAHGQTITKAVEYALLEVGVATIFTAITLAVGVATWAFSELKFQADMGKLLAFMFIVNMVMAMTVLPAFAVWLERAFPRKRPVRMIGALVH
>NZ_CP023316.1|WP_003144178.1|3493282_3494869_-|DUF1302-domain-containing-protein
MGFTFETETLNGSFDSTITAGMGLRTESRGCNLINQGPTGHNAPSGCLAQSSGVADQGDLNYDRGDMFTNYLKGTHELLLKMPEDITFMARGTWIRDFAATDTTGTLSFNTPESVGSNGLSDDARDDLAFKARLLDLWVSKGFDVGGQRVRARLGNQVINWGESLFVAGGINNTNAYDYQALARPGVQLKEAVLPAPMLSVASGLGSGVNVEAYYQFRWNKSELPPVGSYWSTTNALGEGRGDYGFSEKDARDSGQWGLSLRWQPEDSDVAYGFYVMRYHDKLPSLRVAILDPNTFAAAPTWEYQEDRMMYGISANMPIGDWAVGTELSYRPKDSVMLNPVIDLCTGNGGKCWKDEKKFQWHLTGLYSFTPSNSPTLLDFSGASTGSLLTELVVIKYPGLHDEVNGEPLAAGLNAWQLDPARAPKSRGDKTSSGINLDFSLTYDGTLLPGWQVTPGVFYARSLGGRTPNLSATFTEDASSMNLYLNFVRNPASWQISLNYAKFMGGETPYDQLYRDRDYVGIAISRTL
>NZ_CP023316.1|WP_003089182.1|3494952_3496377_-|DUF1329-domain-containing-protein
MKDVTERLEGEAPTRRVFQQQLFMTLAVSTVLCSVQAAPQGPEALGSKLTPLGGEIAASASGDIPAWTQPGQQDEGWSYGQVRGEHWKFKGDKPLYSIDANNLAQHSSKLSPGQVELFKRIPGYRMDVYPTRRTCSAPDFVVENTRQNVGFAKLDAAGLALDEAHVPGIPFPMPSTGAEVMWNMKMRYRGVGVEIPRTISGISPRKGGEWLRQSTDTFFFTPWGKKGSALFSSVGRLENATFFNYLEPAALAGQSAVQTAVAGEQATTFYYFPGQRRVRRMPSYSYDAPQIGLDNQYTVDEANVFFGTMDRFDWKLIGKQELLVPYNDFGAYDTGAKVETFAGNDSIAPQSRRYELHRVWVVEANVRQGMRHQAPKRMFYIDEDSWNPLLAVDYDKQGQIWKVREGFSIPVYETGACDVQAQVQYNLADGRYLFDMTSIGAGKNDIRWLTEDNGSPRLKRDFFTSDNLRAISER

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP023316_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023316_4

6082674-6082766

Orphan

Consensus_repeat	Method
GCCGACAACGGCAGCGAGCAGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023316_4

>merge|NZ_CP023316|4|6082674-6082766|CRISPRCasFinder
GCCGACAACGGCAGCGAGCAGACCATCGACCGCCTGCACAAGGACATGACCAAGGCCGAAGCCCGTCTGGCCGACAACGGCAGCGAACAGACC

>NZ_CP023316|4|4|6082674-6082766|CRISPRCasFinder
GCCGACAACGGCAGCGAGCAGACC	ATCGACCGCCTGCACAAGGACATGACCAAGGCCGAAGCCCGTCTG
GCCGACAACGGCAGCGAACAGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023316.1\|WP_003095476.1\|6074977_6076243_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP023316.1\|WP_003135413.1\|6085791_6087183_+\|heavy-metal-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|273593
NZ_CP023316.1\|WP_073665422.1\|6088709_6089822_-\|fatty-acid-desaturase-DesB	unknown	unknown	gnl\|CDD\|225779
NZ_CP023316.1\|WP_003095488.1\|6077616_6077961_+\|osmotically-inducible-lipoprotein-OsmE	unknown	unknown	gnl\|CDD\|183058
NZ_CP023316.1\|WP_003123548.1\|6085123_6085813_+\|heavy-metal-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|130454
NZ_CP023316.1\|WP_023101625.1\|6091936_6092440_+\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP023316.1\|WP_023101621.1\|6083694_6084309_-\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_CP023316.1\|WP_004365459.1\|6081737_6082271_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NZ_CP023316.1\|WP_003095496.1\|6078558_6079371_+\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	unknown	unknown	gnl\|CDD\|226231
NZ_CP023316.1\|WP_003095524.1\|6091077_6091707_+\|TetR-family-transcriptional-regulator-DesT	unknown	unknown	gnl\|CDD\|236881
NZ_CP023316.1\|WP_023101620.1\|6079372_6081442_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP023316.1\|WP_023101624.1\|6089818_6090919_-\|ferredoxin-reductase	unknown	unknown	gnl\|CDD\|99812
NZ_CP023316.1\|WP_003110939.1\|6073155_6073902_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_023101619.1\|6076988_6077528_+\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP023316.1\|WP_023101622.1\|6087173_6088490_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP023316.1\|WP_003095479.1\|6076417_6076834_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183165
NZ_CP023316.1\|WP_003121125.1\|6073908_6074772_-\|oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|225311
NZ_CP023316.1\|WP_003095492.1\|6078004_6078412_-\|Rho-termination-factor-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377850
NZ_CP023316.1\|WP_003095513.1\|6084362_6084986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023316.1\|WP_003110934.1\|6082930_6083698_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026

Protein	Function_ID	Function_description	E-value
NZ_CP023316.1\|WP_003095476.1\|6074977_6076243_+\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_CP023316.1\|WP_003135413.1\|6085791_6087183_+\|heavy-metal-sensor-histidine-kinase	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	0
NZ_CP023316.1\|WP_073665422.1\|6088709_6089822_-\|fatty-acid-desaturase-DesB	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	7.12632e-66
NZ_CP023316.1\|WP_003095488.1\|6077616_6077961_+\|osmotically-inducible-lipoprotein-OsmE	gnl\|CDD\|183058	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE.	1.90142e-51
NZ_CP023316.1\|WP_003123548.1\|6085123_6085813_+\|heavy-metal-response-regulator-transcription-factor	gnl\|CDD\|130454	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator. Members of this family contain a response regulator receiver domain (pfam00072) and an associated transcriptional regulatory region (pfam00486). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members encoded by genes adjacent to genes for encoding a member of the heavy metal sensor histidine kinase family (TIGRFAMs:TIGR01386), its partner in the two-component response regulator system. [Regulatory functions, DNA interactions].	2.46904e-112
NZ_CP023316.1\|WP_023101625.1\|6091936_6092440_+\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	4.95551e-60
NZ_CP023316.1\|WP_023101621.1\|6083694_6084309_-\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	5.44094e-70
NZ_CP023316.1\|WP_004365459.1\|6081737_6082271_+\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	3.63036e-51
NZ_CP023316.1\|WP_003095496.1\|6078558_6079371_+\|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	1.65802e-48
NZ_CP023316.1\|WP_003095524.1\|6091077_6091707_+\|TetR-family-transcriptional-regulator-DesT	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	7.9449e-41
NZ_CP023316.1\|WP_023101620.1\|6079372_6081442_-\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0
NZ_CP023316.1\|WP_023101624.1\|6089818_6090919_-\|ferredoxin-reductase	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	2.08128e-87
NZ_CP023316.1\|WP_023101619.1\|6076988_6077528_+\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	4.31602e-29
NZ_CP023316.1\|WP_023101622.1\|6087173_6088490_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.42572e-107
NZ_CP023316.1\|WP_003095479.1\|6076417_6076834_-\|hypothetical-protein	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	1.76735e-18
NZ_CP023316.1\|WP_003121125.1\|6073908_6074772_-\|oxaloacetate-decarboxylase	gnl\|CDD\|225311	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism].	1.3777e-87
NZ_CP023316.1\|WP_003095492.1\|6078004_6078412_-\|Rho-termination-factor-N-terminal-domain-containing-protein	gnl\|CDD\|377850	pfam07498, Rho_N, Rho termination factor, N-terminal domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers. This domain is found to the N-terminus of the RNA binding domain (pfam07497).	0.000208897
NZ_CP023316.1\|WP_003110934.1\|6082930_6083698_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	6.87976e-96

>NZ_CP023316.1|WP_004365459.1|6081737_6082271_+|bacterioferritin
MTTVQLTDVQTLRDRARKNIQEGAVTEGYSADRQTVLRLLNEALATELVCFLRYKRHYFMATGLKASIAAAEFLEHANQEMQHADQLAERIMQLGGEPDFNPRGLEERSHAEYVEGKTLKDMVTENLIAERIAIDSYREIITYLGNDDPTSRRIFEEILAQEEEHADDMADILDDLA
>NZ_CP023316.1|WP_023101620.1|6079372_6081442_-|AsmA-family-protein
MTRGRKILTWSLASLVLLLAALVVFIATFDWNLIKPTLNEKVSAALNRPFAINGNLAVAWRREEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLLWQTIRIPQIKLTQPRADLLRLADGRANWDFDLPASDSDEPSAWQLDIREIGFDKGSVSLDDQRLKTRLEVLVDPLGKPVPFGQLAGKALATGDAADAQDYVFGWKVKGTYKGQALAGSGKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDPLNLGALDLRLKLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKVGASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDADVEFTGKRIVHSDQLPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSRVKMSARGFKLKQLFPGFAPMQTSFGELNGDASLSGNGNSVAKILGGADGELKMLINDGAISKGLTEIAGLNVGNYLVTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVAVGPAASLLALVAPSKSDDNQCTALLQRMRQPAKAPAGKR
>NZ_CP023316.1|WP_003095496.1|6078558_6079371_+|c-di-GMP-binding-multidrug-transporter-transcriptional-regulator-BrlR
MLTIGQLARIFEISTKTLRHYDAIGLFVPARTGSDNGYRYYQPEQIEQLSRILALRRLDVPLEAIDRLKRDGALDDPQRLRHFLQRHQHTLREEISARQRLLAELDRTLATLAHWRIRNMHARIVERPAFSVVGMEYFGSAPGDTIGQLWERFIPREHEIAGKHDPEVSYGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIPIY
>NZ_CP023316.1|WP_003095492.1|6078004_6078412_-|Rho-termination-factor-N-terminal-domain-containing-protein
MPRGDKSKYSDKQQRKAEHIEESYKAKGVSESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
>NZ_CP023316.1|WP_003095488.1|6077616_6077961_+|osmotically-inducible-lipoprotein-OsmE
MYKQSLAALFVMATLAGCASTKVQNPVNYITFRNEPLVKDVEKGMSQQEVLRIGGTPSGTQKRLMKPGSCNSYILNKDGQQQPFYVSFDGSGKVDGSGFLSCSELDRHERDARP
>NZ_CP023316.1|WP_023101619.1|6076988_6077528_+|MOSC-domain-containing-protein
MQQVIAVSLCATHAFSKQVRPAIRLLKGLGVEGDAHHGVTVKHRSRVLQDPTQPNLRQVHLIHEELHDELRASGFAIGPGTMGENITTRGVDLLGLPTGTRLRLGESALVELTGLRNPCSQLDNYQPGLTAAVLGRDEQGNLIRKAGVMAIVLEDGEVRPGDAIDIQLPPLPHRALEKV
>NZ_CP023316.1|WP_003095479.1|6076417_6076834_-|hypothetical-protein
MNILRIPMFVLAMAVSAHGFAATAQQEKMTACNAEATTKALKGDERKAFMSGCLKAGAPAGGKATAQQEKMKSCNADASAKSLKGDERKAFMSSCLKAGGSAKAATQQEKMKTCNADATAKALKGDERKAFMSTCLKK
>NZ_CP023316.1|WP_003095476.1|6074977_6076243_+|Hsp70-family-protein
MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSVVFFNVEERRPVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLLGLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVSFQYEPIAAAFDYERGIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGGVHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLALKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLGVELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSAMLPNARHVEGNLFGSIGSGLAIEAKKRYG
>NZ_CP023316.1|WP_003121125.1|6073908_6074772_-|oxaloacetate-decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
>NZ_CP023316.1|WP_003110939.1|6073155_6073902_+|hypothetical-protein
MKIDSASSSPSLAQRQLMTRTPDQDFQRDFQAAYARLAVAAEGSAEQAGALADTLGATQLEYSRVRGVSLEDQLRFAHVLNRACENDAQLDARGFLARLGADDLQALQRNMGLAEPIRVEALSEEGARNLLLPEGYSVDLDGDGITEVGAAKIRHFPPRDAPQAFLDQWLALTAGMDGAAYSNARDGLQWAFDIRAMAGQPLATDQLASYRTAVDDYLGMLAEHRHALVPGQYERDLPLYQALRQRLA
>NZ_CP023316.1|WP_003110934.1|6082930_6083698_-|molybdopterin-dependent-oxidoreductase
MKGPEKKRAKIAIDPSSERQMVDLQRRLLLRGGLSLGALAMLSGCRLQDGDSVDKVLWAMSRWNDRVQAWLFSRTRLAPTFDPSQVVSPFPFNAFYPAYNVPEIDLPEYRLQVSGRVRDKRPWSLEQLRRLPQASQVTQLICIEGWSAIGQWSGVPLRTFLELVGADTSAKYVGFKCADRYYSSLDMPSALHPQTLLALEMSGQALPEENGYPLRLRIPTKLGFKNAKHVVEIFVSNSNPGGYWEDQGYNWFSGV
>NZ_CP023316.1|WP_023101621.1|6083694_6084309_-|cytochrome-b/b6-domain-containing-protein
MNRALHAWPVRLCHWLNAYAMACLIGSGWGIYNASPLLDFRFPAWATLGGWLGGSIAWHLAAMWLLLGNGLCYLAYGLSSGHFRRDFLPLSAAGVWRDLRLALGLRLVHEPGRYNAVQRLLYWLVLALGALLVLSGLAIWKPVQLHGLTALFGGFQGARWVHFLAMAGVVGFVVVHLLLVLLVPRTLLPMIIGREWRRGRRSGG
>NZ_CP023316.1|WP_003095513.1|6084362_6084986_-|hypothetical-protein
MLRLKASPALLFGLLLASAASFAAQPPAGMLQPLRGTIQQAADDHLQLKARNGQQLTVRLTDKTAIRAVSLAKPEDIQPDSFIGTAAVPQPDGTLKALEVHVFAPSLRGSGEGHRPWENADGSASTMTNGTVGNLVVSQGRRMTVKYGDGEKTVVVPDDVPIVSLEPGERSLLKPGAKVVLFPQKGADGSLTALAISVGKDGVTPPM
>NZ_CP023316.1|WP_003123548.1|6085123_6085813_+|heavy-metal-response-regulator-transcription-factor
MRILVIEDDTKTGEYLKKGLGESGYAVDWSQHGADGLYLALENRYDLVVLDVMLPGLDGWQIMEVLRKKHDVPVLFLTARDQLQDRIRGLELGADDYLVKPFSFTELLLRIRTLLRRGVVREAEQVQLADLHLDVLRRKVSRQGQVIALTNKEFALLHLLMRREGEVLSRTLIASEVWDMNFDSDTNVVDVAIKRLRAKVDNPFPNKLIHTVRGIGYVCEERPCPPAAP
>NZ_CP023316.1|WP_003135413.1|6085791_6087183_+|heavy-metal-sensor-histidine-kinase
MPARRSLTLYAALLFAAVAALVVSAVGFYLYRSVEEAMLRRSDVMVAGRVEHFRNLLRDNLTLAELKARPRLFENMLGNEQDILLLGQPGEAPIVAVNPRHERLPSLRVVAAGQALNPSVVHAALTHDGVPMRVLAAEVLVGGREPLQITAAHLLLGETRMLAQYRDRVIAAVLLAFLGTALLGWLVLRHGLRPLRTLAAKAAEIHPTSLDTRLDVAAAPAELQQVAQSFNAMLERLDDGYQRLQQFSADLAHEIRTPIGSLMGHGQVALRQPRSNEEYQALIASNQEELERIARMVESILFLARADDVRAAVERSRLDLGEELRRQAEYFEGLAEERGLSLDIQISGQLRADPQLFRRALSNLLANAIRYANAESLIEVRGLRRSGEFLLSVENACDRLPAEPLSRLFDRFYRGDAARSDAQSSGLGLAIVQAIMRLHGGRAEASAPAPGRIRFELAFPAQD
>NZ_CP023316.1|WP_023101622.1|6087173_6088490_-|MFS-transporter
MFSPLVTFPALYTATLLMLAGSGLFTTYIGLRLTQEGAGDLWVGGLMASYYFGLVCGGKFGHKLIASFGHIRSYVACAGIATVTVLLHALVDQLEVWLLLRFITGAVMMNQYMVIESWLNEQAESHQRGKVFAGYMVAVDLGLVLGQGLLALSPTLDYKPLLLVAICFASCLIPLAMTRRVHPAKLVAAPLEVRFFWQRVPQALGTIFIAGLMVGAFYGLAPVYANRNGLDAAQSSFFVGMCIVAGFCAQWPLGWLSDRLDRSWLIRGNAVLLCLASIPMWGLVTLPYWLLLANGFVTGMLLFTLYPLAVALANDHVEQPRRVALSAMLLTTYGVGACIGPLVAGALMRHFGPGLFYMLVSGYAVLLVFWVQPKRVTGEHRVDEAPLQHVAMPDTVSPMAATLDPRVEEVPEELVVEAPANIGRSDGEPDAGEKPAQS
>NZ_CP023316.1|WP_073665422.1|6088709_6089822_-|fatty-acid-desaturase-DesB
MNRPASPAMRDDRELTPEQLAAFGAELDALRQRTLADLGADDARYIRRVRAAVRVCCWSGRALLMFGWLPPTWLLGSLLLGLGKILENMELGHNVMHGQYDWMNDPEFAGRAYEWDIAGPSDFWRHTHNHIHHTYTNVLGKDDDVGYGVVRLFPEQRWKPFYRWQPLWVTLQALLFQYAVAIQHLRLDKYAKGRLDKAELMPLLRRLRAKLGRQWTKDYLLFPLLGLFAGGFGAVFVGNLLANVLRNLWTFTVIFCGHFTEKAVVFPPSVLEGETRGHWYLRQLRGSSNLEGGPLFHILTGNLSHQIEHHLYPDLPARRYAALSREVREIARRYGQTYNSGRLGRQFLTVLRRIWVYRLPPREPLPARRG
>NZ_CP023316.1|WP_023101624.1|6089818_6090919_-|ferredoxin-reductase
MALLPLALLTPLLAPLRRLAARGWLREADVDGLLRHAHPLASLNRHYARVEARYWVADDMLALALRTAPGWPPARPGQHIQLLAERDGVRVGRSYSLTRVVGERLEIAVKRHPDGLLSPWLCEHLAVGQRVELQPAQGDLRWPMQAEAVCLLAAGSGLTPLLGLLREALENGYRGPVLWLHYARHPGQRAWLGELEALAARHPNLELRWSLTRGARADGCLEGHFQPRHLDGWAADLARSQALACGPAAFVEAVGEQLGARFAGLQTESFSVPRWRSGEAPREVRLRFARSQREVSGDSAASLLEQAEAHGLRPAHGCRQGICASCTCVLLSGCVRDLRSGALCSEPGQSIRLCVSAAHGDLALDL
>NZ_CP023316.1|WP_003095524.1|6091077_6091707_+|TetR-family-transcriptional-regulator-DesT
MSSPRAEQKQQTRHALMSAARHLMESGRGFGSLSLREVTRAAGIVPAGFYRHFSDMDQLGLALVAEVDETFRATLRAVRRNEFELGGLIDASVRIFLDAVGANRSQFLFLAREQYGGSLPIRQAIASLRQRITDDLAADLALLNKMPHLDGAALDVFADLVVKTVFATLPELIDPPAADLPPHLMPAAKITHQLRFIMIGGKHWHGLPD
>NZ_CP023316.1|WP_023101625.1|6091936_6092440_+|urease-accessory-protein-UreE
MLVIHQRLPARSPRWDEELHLTYEARSKSRLRCFTASGEEVGLFLERGQPPLADGDCLEARDGRLVRVVARPERLLHVTCASPLELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLEQLGATVEAIEAPFQPEHGAYGGGHHHSHHGEAEFNYAPRLHQFGVRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

54584 : 116585

Dishui_lake_phycodnavirus(20.0%)

plate,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016252823.1\|54584_55277_+\|transposase	transposase	NA	NA	NA	NA
WP_049347895.1\|55688_56018_+	hypothetical protein	NA	NA	NA	NA
WP_071533946.1\|56442_56685_+	hydrolase	NA	NA	NA	NA
WP_095694598.1\|56866_57568_+\|transposase	transposase	NA	NA	NA	NA
WP_138223870.1\|57684_57930_+	hypothetical protein	NA	NA	NA	NA
WP_126589851.1\|58302_58704_+	hypothetical protein	NA	NA	NA	NA
WP_071533940.1\|62444_62918_+	hypothetical protein	NA	NA	NA	NA
WP_023112580.1\|63356_63644_+	hypothetical protein	NA	NA	NA	NA
WP_003083536.1\|65585_65981_+	hypothetical protein	NA	NA	NA	NA
WP_031285743.1\|66251_67661_-	MgtC/SapB family protein	NA	NA	NA	NA
WP_031693473.1\|67824_69198_+	T3SS effector bifunctional cytotoxin exoenzyme T	NA	NA	NA	NA
WP_003083559.1\|69693_70380_+	CsgG/HfaB family protein	NA	NA	NA	NA
WP_003083569.1\|70410_70764_+	DUF4810 domain-containing protein	NA	NA	NA	NA
WP_003083573.1\|70760_71426_+	DUF799 domain-containing protein	NA	NA	NA	NA
WP_023098297.1\|71440_71824_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_170916958.1\|72105_73614_-	hypothetical protein	NA	NA	NA	NA
WP_003083582.1\|74360_74501_+	hypothetical protein	NA	NA	NA	NA
WP_003083584.1\|74562_74700_+	hypothetical protein	NA	NA	NA	NA
WP_016263993.1\|75326_77159_+	asparagine synthase (glutamine-hydrolyzing)	A0A2K9R7N5	Dishui_lake_phycodnavirus	2.7e-17	28.3
WP_031693475.1\|77211_77640_-	cupin domain-containing protein	NA	NA	NA	NA
WP_003104297.1\|77847_78396_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	6.1e-34	41.6
WP_031693476.1\|78434_78941_-	DUF1993 family protein	NA	NA	NA	NA
WP_003083596.1\|79006_79927_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003083599.1\|80034_80922_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_031693477.1\|80984_81689_+	DsbA family protein	NA	NA	NA	NA
WP_003118563.1\|81772_82228_+	OsmC family protein	NA	NA	NA	NA
WP_003083610.1\|82338_82572_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_023107497.1\|82583_83021_-	hypothetical protein	NA	NA	NA	NA
WP_003083614.1\|83077_83494_-	hypothetical protein	NA	NA	NA	NA
WP_049955884.1\|83585_84713_+	aminopeptidase	NA	NA	NA	NA
WP_003118565.1\|84720_85704_-	hypothetical protein	NA	NA	NA	NA
WP_015502122.1\|85736_86402_-	HAD family hydrolase	NA	NA	NA	NA
WP_003128183.1\|86394_86937_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_016852309.1\|87014_89060_+	oligopeptidase A	A0A1V0SD92	Indivirus	7.8e-34	21.3
WP_031693479.1\|89056_89332_+	YheV family putative metal-binding protein	NA	NA	NA	NA
WP_031693480.1\|89420_90479_+	PA0069 family radical SAM protein	NA	NA	NA	NA
WP_003083630.1\|90709_91624_-	hypothetical protein	NA	NA	NA	NA
WP_023126806.1\|91685_93398_-	formylglycine-generating enzyme family protein	NA	NA	NA	NA
WP_031693481.1\|93390_94590_-	ABC transporter permease	NA	NA	NA	NA
WP_003114657.1\|94589_95309_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-18	36.3
WP_031693482.1\|95305_98404_-	protein kinase	M1PCM5	Moumouvirus	2.5e-23	27.8
WP_003083639.1\|98411_99140_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_003083642.1\|99149_99830_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_031693483.1\|99826_103360_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_003115051.1\|103356_104706_-	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_023083850.1\|104712_106047_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_003083660.1\|106062_106527_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_108193584.1\|106571_108113_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_095694543.1\|108480_109515_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_003083666.1\|109603_110122_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_003111626.1\|110134_111631_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003083670.1\|111706_112195_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003119488.1\|112362_113208_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003083674.1\|113209_113719_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003083676.1\|113715_115575_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003083679.1\|115538_116585_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_2

699525 : 755181

uncultured_Caudovirales_phage(26.92%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003109020.1\|699525_700551_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.7e-109	58.1
WP_003085061.1\|700629_701199_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|701282_701636_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003137363.1\|701626_702169_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003117955.1\|702141_703374_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	2.0e-77	43.3
WP_003085071.1\|703417_703924_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003085073.1\|704018_705572_-	SpoVR family protein	NA	NA	NA	NA
WP_003099579.1\|705568_706840_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|706940_708863_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003099577.1\|709141_709474_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003113213.1\|709517_710369_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.1e-08	33.3
WP_021263064.1\|710368_710749_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003099569.1\|710785_711592_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_021263063.1\|711707_712694_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003109024.1\|712690_713983_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_023100781.1\|713963_716765_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_031684171.1\|716897_718610_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	9.4e-283	82.5
WP_003137370.1\|719881_720898_+	phosphotransferase	NA	NA	NA	NA
WP_003085095.1\|720894_721569_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003085097.1\|721570_722329_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_021263061.1\|722329_723391_-	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_021263060.1\|723542_725936_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003085103.1\|725981_726614_+	response regulator transcription factor	NA	NA	NA	NA
WP_003085106.1\|726742_727777_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021263059.1\|728010_729120_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_003109043.1\|729175_730222_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021263058.1\|730336_731584_+	ABC transporter permease	NA	NA	NA	NA
WP_003085119.1\|731689_732520_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|732643_733318_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003099532.1\|733317_734136_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_021263057.1\|734208_735687_+	anthranilate synthase component I	NA	NA	NA	NA
WP_003085128.1\|735873_736188_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_003109047.1\|736287_737058_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	7.9e-72	59.0
WP_003085132.1\|737515_737716_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003085135.1\|737763_738123_+	hypothetical protein	NA	NA	NA	NA
WP_003118908.1\|738485_738935_+	hypothetical protein	B5TK61	Pseudomonas_phage	5.0e-26	53.3
WP_021263056.1\|738956_739472_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	6.3e-33	43.4
WP_003121844.1\|739468_740026_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	6.0e-45	70.3
WP_003085143.1\|740178_740505_+	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003085151.1\|740501_741389_+	bacteriophage protein	S4TNY7	Salmonella_phage	5.3e-88	59.8
WP_003137385.1\|741381_741915_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	5.2e-62	64.6
WP_015502281.1\|741916_744025_+\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	6.5e-225	52.3
WP_003085172.1\|744033_744474_+\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_003109051.1\|744516_745677_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	2.7e-188	83.4
WP_003085175.1\|745689_746193_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003085178.1\|746207_746552_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_023100783.1\|746721_748959_+\|tail	phage tail length determinator protein	NA	NA	NA	NA
WP_003085182.1\|748968_749841_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	3.9e-75	51.7
WP_003101635.1\|749815_750022_+\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_021263054.1\|750079_751069_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.7e-106	55.5
WP_023100784.1\|751101_751731_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	7.1e-87	78.5
WP_023100785.1\|751727_752090_+	hypothetical protein	H2BDA0	Pseudomonas_phage	7.1e-15	47.1
WP_003118919.1\|752086_752344_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	8.3e-18	64.6
WP_003117978.1\|752691_753297_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003085203.1\|753298_754348_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_021263053.1\|754344_755181_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.6e-70	56.9

DBSCAN-SWA_3

1556474 : 1566131

uncultured_Mediterranean_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003098558.1\|1556474_1557110_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_021265159.1\|1557155_1558049_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003113871.1\|1558153_1559158_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092272.1\|1559584_1559908_-	ferredoxin family protein	NA	NA	NA	NA
WP_003122151.1\|1559974_1562542_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.4e-24	22.1
WP_021265158.1\|1562667_1563675_-	TolB family protein	NA	NA	NA	NA
WP_003092262.1\|1563822_1564329_+	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_019395734.1\|1565084_1566131_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	1.7e-109	61.5

DBSCAN-SWA_4

2479185 : 2539557

Pseudomonas_phage(64.06%)

tRNA,tail,terminase,transposase,integrase

attL 2480816:2480836|attR 2489916:2489936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003090870.1\|2479185_2480370_+	SpoIIE family protein phosphatase	Q56AR1	Bacillus_thuringiensis_phage	7.3e-08	31.9
WP_003104052.1\|2480366_2480849_+	STAS domain-containing protein	NA	NA	NA	NA
2480816:2480836	attL	NA	NA	NA	NA
WP_003090868.1\|2480933_2481857_-	transaldolase	A0A1D8KMI9	Synechococcus_phage	6.5e-12	30.0
WP_031635261.1\|2481936_2482941_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_031628314.1\|2483044_2484151_+\|integrase	tyrosine-type recombinase/integrase	L7TP61	Pseudomonas_virus	3.5e-214	99.7
WP_003160559.1\|2484160_2484445_-	pyocin activator PrtN family protein	A0A2K8HN48	Pseudomonas_phage	8.0e-46	100.0
WP_031629037.1\|2484520_2484907_-	hypothetical protein	L7TJJ9	Pseudomonas_virus	3.6e-65	100.0
WP_172770540.1\|2485100_2485664_-	hypothetical protein	Q5QF38	Pseudomonas_virus	1.3e-60	69.3
WP_023101073.1\|2486178_2486685_-	hypothetical protein	L7TI83	Pseudomonas_virus	3.2e-90	98.8
WP_023101074.1\|2486677_2486872_-	hypothetical protein	NA	NA	NA	NA
WP_023101075.1\|2486879_2487641_-	hypothetical protein	Q5QF32	Pseudomonas_virus	4.8e-146	96.8
WP_016263630.1\|2487637_2488126_-	DUF1643 domain-containing protein	A0A0U1W068	Pseudomonas_phage	7.5e-92	95.7
WP_058011908.1\|2488122_2488755_-	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	1.3e-91	81.9
WP_108116075.1\|2488949_2489051_-	hypothetical protein	NA	NA	NA	NA
WP_172770459.1\|2489141_2489408_-	hypothetical protein	L7TP01	Pseudomonas_virus	3.9e-10	56.2
WP_023101078.1\|2489404_2491495_-	DNA cytosine methyltransferase	A0A140IES2	Pseudomonas_phage	0.0e+00	86.9
2489916:2489936	attR	NA	NA	NA	NA
WP_124171382.1\|2491610_2491937_+	hypothetical protein	NA	NA	NA	NA
WP_023101079.1\|2492104_2493850_-	AAA family ATPase	H2BD46	Pseudomonas_phage	1.7e-300	96.7
WP_023101080.1\|2493853_2494843_-	DNA translocase FtsK	H2BD47	Pseudomonas_phage	5.2e-92	61.4
WP_003099029.1\|2494855_2495056_-	hypothetical protein	J7I437	Pseudomonas_phage	2.5e-30	98.5
WP_003099031.1\|2495062_2495950_-	recombination protein RecT	Q858E1	Salmonella_phage	2.4e-104	73.6
WP_023101081.1\|2495962_2496871_-	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	2.1e-124	71.6
WP_010793152.1\|2496881_2497091_-	hypothetical protein	NA	NA	NA	NA
WP_010793151.1\|2497087_2497309_-	hypothetical protein	A0A127KNM7	Pseudomonas_phage	2.8e-30	95.7
WP_019486665.1\|2497292_2497445_-	hypothetical protein	A0A127KNF7	Pseudomonas_phage	6.9e-12	100.0
WP_003099041.1\|2498021_2498393_-	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	8.5e-64	100.0
WP_023101082.1\|2498428_2498641_-	hypothetical protein	A0A0U1VYM8	Pseudomonas_phage	6.8e-34	97.1
WP_023101083.1\|2498694_2498970_-	hypothetical protein	V5K2Z2	Pseudomonas_phage	1.2e-46	97.8
WP_023101084.1\|2499463_2499703_-	DUF1654 domain-containing protein	A0A127KND4	Pseudomonas_phage	2.0e-37	96.2
WP_023101085.1\|2499796_2500111_+	DUF1654 domain-containing protein	A0A127KNY9	Pseudomonas_phage	1.6e-50	98.1
WP_023435165.1\|2500208_2500628_-	hypothetical protein	NA	NA	NA	NA
WP_023101086.1\|2500624_2501182_-	SocA family protein	NA	NA	NA	NA
WP_031635265.1\|2501296_2501896_-	helix-turn-helix domain-containing protein	A0A0M4QWY1	Salmonella_phage	9.3e-52	51.7
WP_019396726.1\|2502044_2502287_+	helix-turn-helix transcriptional regulator	A0A127KNT2	Pseudomonas_phage	7.5e-37	100.0
WP_023101089.1\|2502545_2503037_-	hypothetical protein	J7HXA3	Pseudomonas_phage	1.2e-84	97.5
WP_003103363.1\|2503140_2503713_+	hypothetical protein	J7I4J9	Pseudomonas_phage	5.5e-102	100.0
WP_031635269.1\|2503715_2504678_+	hypothetical protein	A0A2H4JCW9	uncultured_Caudovirales_phage	1.2e-13	47.5
WP_031635270.1\|2504805_2505219_+	hypothetical protein	NA	NA	NA	NA
WP_019396730.1\|2505211_2505655_+	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	2.1e-77	99.3
WP_023101091.1\|2505683_2506553_+	hypothetical protein	J7HXH6	Pseudomonas_phage	8.5e-139	83.4
WP_023101092.1\|2506612_2506921_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_023101093.1\|2506895_2507171_-	type II toxin-antitoxin system prevent-host-death family antitoxin	A0A0A1IU40	Pseudomonas_phage	2.7e-06	64.9
WP_023101094.1\|2507432_2507756_+	hypothetical protein	A0A125RNL3	Pseudomonas_phage	2.2e-39	77.3
WP_031635272.1\|2507761_2508052_+	hypothetical protein	A0A125RNL4	Pseudomonas_phage	3.1e-21	62.1
WP_031635274.1\|2508109_2508568_+	hypothetical protein	NA	NA	NA	NA
WP_023101096.1\|2508622_2509219_+\|terminase	terminase small subunit	H2BD75	Pseudomonas_phage	3.3e-49	61.9
WP_023101097.1\|2509205_2510501_+	hypothetical protein	A0A1B1P9C9	Acinetobacter_phage	1.3e-146	59.5
WP_023101098.1\|2510503_2511859_+	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	3.7e-96	45.8
WP_023101099.1\|2511855_2512935_+	hypothetical protein	A0A0S2SY77	Pseudomonas_phage	2.3e-202	98.6
WP_031635275.1\|2513064_2513808_+	hypothetical protein	A0A0H5AWD1	Pseudomonas_phage	6.5e-87	75.0
WP_023101101.1\|2513817_2514789_+	hypothetical protein	A0A0M3LQL5	Mannheimia_phage	1.6e-109	64.4
WP_003103393.1\|2514830_2515316_+	hypothetical protein	NA	NA	NA	NA
WP_023101102.1\|2515299_2515764_+	hypothetical protein	H9EB35	Vibrio_phage	4.0e-10	36.4
WP_023101103.1\|2515763_2516153_+	hypothetical protein	A0A2H4JAS3	uncultured_Caudovirales_phage	2.8e-33	55.0
WP_023087397.1\|2516156_2516831_+	hypothetical protein	A0A0S2SY81	Pseudomonas_phage	1.0e-115	96.4
WP_023101104.1\|2516827_2517238_+	DUF4128 domain-containing protein	A0A1B0VMI0	Pseudomonas_phage	5.1e-25	44.1
WP_003451664.1\|2517305_2517959_+\|tail	phage tail protein	A0A2H4IZV5	uncultured_Caudovirales_phage	1.3e-59	52.3
WP_022579905.1\|2517968_2518349_+\|tail	phage tail assembly chaperone	A0A1B0VMH4	Pseudomonas_phage	9.8e-23	45.7
WP_003103408.1\|2518411_2518675_+	DUF1799 domain-containing protein	A0A2R3UAE2	Siphoviridae_environmental_samples	3.6e-16	46.0
WP_023101105.1\|2518671_2521896_+\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	2.5e-135	37.9
WP_003160550.1\|2521901_2522240_+\|tail	phage tail protein	A0A0S2SYI2	Pseudomonas_phage	5.8e-59	97.3
WP_003160549.1\|2522236_2522986_+\|tail	phage minor tail protein L	A0A0S2SY57	Pseudomonas_phage	1.0e-132	90.8
WP_023101106.1\|2522988_2523744_+	C40 family peptidase	A0A0S2SY75	Pseudomonas_phage	3.3e-147	98.8
WP_023436164.1\|2523769_2524018_+	hypothetical protein	A0A0S2SYE8	Pseudomonas_phage	9.1e-38	97.6
WP_023101107.1\|2524001_2524232_-	hypothetical protein	A0A0S2SY71	Pseudomonas_phage	4.8e-17	97.7
WP_124130527.1\|2524268_2524589_-	hypothetical protein	A0A0S2SYA2	Pseudomonas_phage	1.0e-41	98.8
WP_128551610.1\|2524798_2525362_+	hypothetical protein	A0A0S2SYF4	Pseudomonas_phage	1.4e-30	98.5
WP_023101109.1\|2525432_2526017_+\|tail	tail assembly protein	A0A0S2SYS2	Pseudomonas_phage	4.0e-100	95.9
WP_128551611.1\|2526013_2526538_-	hypothetical protein	NA	NA	NA	NA
WP_023101110.1\|2526662_2530229_+\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	87.5
WP_031300639.1\|2531572_2532313_+	hypothetical protein	A0A2H4J1J6	uncultured_Caudovirales_phage	3.1e-57	59.4
WP_021264313.1\|2532357_2532987_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	5.4e-111	95.7
WP_023101113.1\|2532983_2533352_+	hypothetical protein	H2BDD6	Pseudomonas_virus	8.2e-43	82.8
WP_003130908.1\|2533348_2533612_+	hypothetical protein	B5WZU5	Pseudomonas_phage	4.5e-35	88.5
WP_003160542.1\|2533647_2533911_+	hypothetical protein	Q9MC87	Pseudomonas_phage	9.0e-44	94.3
WP_021263881.1\|2534015_2534504_+	hypothetical protein	NA	NA	NA	NA
WP_023981043.1\|2534500_2534746_+	hypothetical protein	NA	NA	NA	NA
WP_161477443.1\|2535726_2536869_-	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	8.2e-41	33.8
WP_023101115.1\|2536953_2537616_-	hypothetical protein	NA	NA	NA	NA
WP_101476525.1\|2538395_2539557_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	5.6e-85	53.6

DBSCAN-SWA_5

2826109 : 2833003

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003097631.1\|2826109_2827390_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4
WP_003108773.1\|2827391_2828789_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003097628.1\|2828793_2829768_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003108776.1\|2829855_2830839_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	9.3e-142	74.3
WP_021264897.1\|2830835_2831171_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	9.5e-38	68.5
WP_021264896.1\|2831167_2831473_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_003090389.1\|2831472_2831832_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	61.7
WP_023099506.1\|2831828_2832224_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	4.5e-47	71.3
WP_021264895.1\|2832334_2833003_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.9e-90	81.6

DBSCAN-SWA_6

3265713 : 3304176

Planktothrix_phage(33.33%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003122677.1\|3265713_3266997_-\|tail	pyoverdine-tailoring periplasmic protein PvdN	NA	NA	NA	NA
WP_003103610.1\|3267019_3268366_-\|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	NA	NA	NA	NA
WP_021264821.1\|3268581_3270216_+	pyoverdine maturation tyrosinase PvdP	NA	NA	NA	NA
WP_019371757.1\|3270264_3271689_-	pyoverdine export/recycling transporter outer membrane subunit OmpQ	NA	NA	NA	NA
WP_003089549.1\|3271694_3273686_-	pyoverdine export/recycling transporter ATP-binding/permease subunit PvdT	G9BWD6	Planktothrix_phage	6.9e-35	39.3
WP_003089547.1\|3273685_3274861_-	pyoverdine export/recycling transporter periplasmic adaptor subunit PvdR	NA	NA	NA	NA
WP_023101244.1\|3274961_3275957_-	pyoverdine signaling pathway anti-sigma factor FpvR	NA	NA	NA	NA
WP_003103620.1\|3276120_3276600_+	pyoverdine signaling pathway sigma factor FpvI	NA	NA	NA	NA
WP_003114509.1\|3276732_3278064_+	L-ornithine N(5)-monooxygenase PvdA	NA	NA	NA	NA
WP_023101245.1\|3278186_3280475_+	acylase	NA	NA	NA	NA
WP_003089535.1\|3280654_3280978_+	transcriptional repressor	NA	NA	NA	NA
WP_003114511.1\|3281019_3281940_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003104946.1\|3282036_3283188_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_095694578.1\|3283254_3283497_-	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_003104944.1\|3283791_3284028_+	hypothetical protein	NA	NA	NA	NA
WP_003089521.1\|3284294_3284765_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_021264818.1\|3284761_3287077_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_023101246.1\|3287493_3288699_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003131531.1\|3288899_3289541_-	response regulator transcription factor	NA	NA	NA	NA
WP_021264815.1\|3289817_3290213_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_003131532.1\|3290235_3290772_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_021264814.1\|3290782_3292789_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.7e-42	29.5
WP_003122693.1\|3293137_3293710_-	hypothetical protein	NA	NA	NA	NA
WP_095694577.1\|3293731_3296281_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	5.5e-77	29.4
WP_015502887.1\|3296282_3297299_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_003089497.1\|3297262_3299056_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003089496.1\|3299039_3299465_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_003089495.1\|3299477_3299975_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003089494.1\|3300048_3301533_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003089493.1\|3301555_3302101_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_009316131.1\|3302308_3302785_+	hypothetical protein	NA	NA	NA	NA
WP_023095587.1\|3302844_3304176_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_7

4647740 : 4715370

Bacillus_phage(23.08%)

tRNA,bacteriocin,protease,transposase,integrase

attL 4674920:4674943|attR 4721237:4721260

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003082453.1\|4647740_4648238_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_023101430.1\|4648239_4649421_-	CoA transferase	NA	NA	NA	NA
WP_021264456.1\|4649509_4650649_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_023095944.1\|4650750_4651770_-	LLM class oxidoreductase	NA	NA	NA	NA
WP_003140525.1\|4651766_4652396_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003109209.1\|4652597_4653488_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003082442.1\|4653562_4654873_-	C4-dicarboxylate transporter DctC	NA	NA	NA	NA
WP_003106595.1\|4655208_4656210_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_021264455.1\|4656213_4659576_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	7.9e-15	33.1
WP_003086574.1\|4659677_4661024_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_003082436.1\|4661020_4661698_-	response regulator	NA	NA	NA	NA
WP_003082431.1\|4661777_4662380_-	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_003082429.1\|4662601_4662769_+	periplasmic nitrate reductase, NapE protein	NA	NA	NA	NA
WP_009315481.1\|4662777_4663269_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_009315480.1\|4663261_4663591_+	chaperone NapD	NA	NA	NA	NA
WP_003107632.1\|4663571_4666076_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_003082414.1\|4666086_4666578_+	cytochrome C protein NapB	NA	NA	NA	NA
WP_003082412.1\|4666588_4667185_+	cytochrome c3 family protein	NA	NA	NA	NA
WP_003133821.1\|4667216_4668413_-	lytic murein transglycosylase	NA	NA	NA	NA
WP_003086563.1\|4668869_4669604_+	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	1.7e-31	41.2
WP_023101431.1\|4669647_4671705_-	oleic acid lipoxygenase	NA	NA	NA	NA
WP_003082401.1\|4671782_4672103_-	hypothetical protein	NA	NA	NA	NA
WP_003082396.1\|4672602_4673274_-	polysaccharide lyase family 7 protein	NA	NA	NA	NA
WP_003086555.1\|4673449_4674238_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_003082383.1\|4674465_4675194_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
4674920:4674943	attL	NA	NA	NA	NA
WP_003086553.1\|4675194_4676007_-\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	1.4e-13	29.3
WP_004348676.1\|4676218_4678828_+	glycosyltransferase	M1I277	Paramecium_bursaria_Chlorella_virus	1.1e-16	26.8
WP_023101432.1\|4678942_4680094_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
WP_003086550.1\|4680093_4680897_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003082373.1\|4680914_4681298_+	hypothetical protein	NA	NA	NA	NA
WP_003082372.1\|4681403_4681613_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.0e-14	58.1
WP_003082362.1\|4681932_4683291_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	7.8e-14	26.3
WP_003082360.1\|4683632_4684343_-	winged helix-turn-helix domain-containing protein	W8CYM9	Bacillus_phage	3.3e-32	33.5
WP_003082358.1\|4685076_4687968_+	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	9.9e-184	46.3
WP_003086547.1\|4688231_4689479_+	ribonucleotide-diphosphate reductase subunit beta	K4K678	Caulobacter_phage	7.6e-32	29.0
WP_003109068.1\|4689833_4690367_+\|transposase	transposase	NA	NA	NA	NA
WP_019725959.1\|4690899_4691454_+	Bro-N domain-containing protein	NA	NA	NA	NA
WP_021264452.1\|4691659_4691893_-	hypothetical protein	NA	NA	NA	NA
WP_015648363.1\|4692308_4692581_-	hypothetical protein	NA	NA	NA	NA
WP_003082347.1\|4692597_4692942_-	hypothetical protein	NA	NA	NA	NA
WP_003112475.1\|4693457_4693721_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_171019194.1\|4693722_4694997_-	S-type pyocin domain-containing protein	NA	NA	NA	NA
WP_003109071.1\|4696267_4696636_+	DUF2195 family protein	NA	NA	NA	NA
WP_003109072.1\|4696663_4697443_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_023101434.1\|4697753_4699661_+	exotoxin A	NA	NA	NA	NA
WP_023101435.1\|4699920_4701411_+	amino acid permease	NA	NA	NA	NA
WP_021264449.1\|4701512_4702694_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_095694540.1\|4702698_4703568_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003120170.1\|4703704_4706719_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	7.4e-73	24.9
WP_003111043.1\|4706715_4707078_+	hypothetical protein	NA	NA	NA	NA
WP_003120171.1\|4707247_4707712_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003120172.1\|4707719_4708625_-	EamA family transporter	NA	NA	NA	NA
WP_058011884.1\|4708827_4709844_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.0e-46	37.2
WP_179295303.1\|4709878_4710451_-	hypothetical protein	NA	NA	NA	NA
WP_003111047.1\|4710466_4711876_-	homospermidine synthase	B2ZXX8	Ralstonia_phage	1.2e-94	39.1
WP_003131866.1\|4712287_4713604_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA
WP_003111049.1\|4713625_4714369_-	phage Gp37/Gp68 family protein	A0A2P1A0W3	Gordonia_phage	1.8e-60	45.5
WP_003111050.1\|4714398_4715370_-\|integrase	site-specific integrase	NA	NA	NA	NA
4721237:4721260	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP023316.1|WP_003158163.1|4898333_4898708_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP023316.1|WP_095694605.1|4900449_4900842_+|ABC-transporter-permease

Click the colored protein region to show detailed information

Acr_ID: NZ_CP023316.1|WP_003158159.1|4901961_4902285_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP023316.1|WP_003158163.1|4898333_4898708_+|hypothetical-protein

4898333_4898708_+

124 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|27	1.0	1	1.0

NZ_CP023316.1|WP_095694605.1|4900449_4900842_+|ABC-transporter-permease

4900449_4900842_+

130 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|3	0.4251968503937008	0.9307692307692308	0.8785714285714286

NZ_CP023316.1|WP_003158159.1|4901961_4902285_+|hypothetical-protein

4901961_4902285_+

107 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|15	0.6213592233009708	0.9719626168224299	0.99

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023316

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information