CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP023070	Sinorhizobium fredii CCBAU 83666 chromosome, complete genome	1 crisprs	csa3,WYL,cas3,RT,DEDDh	0	4
NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	0 crisprs	RT	0	7
NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	2 crisprs	csa3	5	2
NZ_CP023073	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666d, complete sequence	0 crisprs	NA	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023070_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023070_1

800313-800422

Orphan

Consensus_repeat	Method
GCGGCGCGGACGGTCGTCACGATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023070_1

>merge|NZ_CP023070|1|800313-800422|CRISPRCasFinder
GCGGCGCGGACGGTCGTCACGATCGCCACGGTCCGGGCGCGGACCACGGTCACCGAAACCACCACGATCCGGACGGTCGCCGTCGCGGCGCGGACGGTCGTCACGGTCGC

>NZ_CP023070|1|1|800313-800422|CRISPRCasFinder
GCGGCGCGGACGGTCGTCACGATCGC	CACGGTCCGGGCGCGGACCACGGTCACCGAAACCACCACGATCCGGACGGTCGCCGTC
GCGGCGCGGACGGTCGTCACGGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023070.1\|WP_012707461.1\|800017_800266_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_CP023070.1\|WP_014327832.1\|808293_809181_+\|YicC-family-protein	unknown	unknown	gnl\|CDD\|224477
NZ_CP023070.1\|WP_014327818.1\|791385_792789_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NZ_CP023070.1\|WP_014327829.1\|803822_804560_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|171820
NZ_CP023070.1\|WP_014327825.1\|798872_799826_-\|membrane-protein	unknown	unknown	unknown
NZ_CP023070.1\|WP_014327828.1\|802851_803796_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP023070.1\|WP_014327822.1\|795822_796128_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|226916
NZ_CP023070.1\|WP_014327824.1\|798261_798837_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP023070.1\|WP_014327833.1\|809184_809844_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP023070.1\|WP_003531676.1\|804898_805135_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP023070.1\|WP_014327831.1\|806901_808089_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|224475
NZ_CP023070.1\|WP_014327820.1\|794198_795056_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP023070.1\|WP_014327826.1\|801109_801442_+\|four-helix-bundle-copper-binding-protein	unknown	unknown	gnl\|CDD\|153434
NZ_CP023070.1\|WP_014327817.1\|790645_791245_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|224205
NZ_CP023070.1\|WP_048655341.1\|795172_795826_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP023070.1\|WP_014327823.1\|796334_797834_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181676
NZ_CP023070.1\|WP_037391159.1\|805350_806616_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235987
NZ_CP023070.1\|WP_037431273.1\|809973_810798_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP023070.1\|WP_014327819.1\|792916_794056_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|223858
NZ_CP023070.1\|WP_014327827.1\|801477_802521_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381320

Protein	Function_ID	Function_description	E-value
NZ_CP023070.1\|WP_012707461.1\|800017_800266_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	1.52598e-37
NZ_CP023070.1\|WP_014327832.1\|808293_809181_+\|YicC-family-protein	gnl\|CDD\|224477	COG1561, COG1561, Uncharacterized stress-induced protein [Function unknown].	5.43405e-112
NZ_CP023070.1\|WP_014327818.1\|791385_792789_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP023070.1\|WP_014327829.1\|803822_804560_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|171820	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed.	3.47459e-169
NZ_CP023070.1\|WP_014327828.1\|802851_803796_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.9533e-133
NZ_CP023070.1\|WP_014327822.1\|795822_796128_+\|AzlD-domain-containing-protein	gnl\|CDD\|226916	COG4541, COG4541, Predicted membrane protein [Function unknown].	1.37585e-16
NZ_CP023070.1\|WP_014327824.1\|798261_798837_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	3.2943e-64
NZ_CP023070.1\|WP_014327833.1\|809184_809844_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	1.19925e-115
NZ_CP023070.1\|WP_003531676.1\|804898_805135_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.25258e-33
NZ_CP023070.1\|WP_014327831.1\|806901_808089_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|224475	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism].	7.10586e-147
NZ_CP023070.1\|WP_014327820.1\|794198_795056_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.11141e-30
NZ_CP023070.1\|WP_014327826.1\|801109_801442_+\|four-helix-bundle-copper-binding-protein	gnl\|CDD\|153434	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	1.83116e-22
NZ_CP023070.1\|WP_014327817.1\|790645_791245_-\|CvpA-family-protein	gnl\|CDD\|224205	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only].	9.89801e-48
NZ_CP023070.1\|WP_048655341.1\|795172_795826_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	6.88305e-58
NZ_CP023070.1\|WP_014327823.1\|796334_797834_-\|replicative-DNA-helicase	gnl\|CDD\|181676	PRK09165, PRK09165, replicative DNA helicase; Provisional.	0
NZ_CP023070.1\|WP_037391159.1\|805350_806616_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
NZ_CP023070.1\|WP_037431273.1\|809973_810798_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.05731e-131
NZ_CP023070.1\|WP_014327819.1\|792916_794056_-\|alanine-racemase	gnl\|CDD\|223858	COG0787, Alr, Alanine racemase [Cell envelope biogenesis, outer membrane].	6.26298e-151
NZ_CP023070.1\|WP_014327827.1\|801477_802521_-\|aldo/keto-reductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	3.13474e-171

>NZ_CP023070.1|WP_012707461.1|800017_800266_-|30S-ribosomal-protein-S18
MAEVSSAPVRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQKKQRELAQAIKRARFLGLLPYVVS
>NZ_CP023070.1|WP_014327825.1|798872_799826_-|membrane-protein
MQNWNRTSLITGALAGIAAALLSMGANTQSSLAIVLYAASALPILIAGLGWGNAAAVTAIIAAGVTAASLVSSYFALLILVVTLVPAGWLSHLANLARPAPELGGPEGALAWYPLSDILGHLAGLVTLGMIIVATIVGYDSSVSDLMVDMVVEAVKAQEPLYNPDAAAIAQLKSMFTLALPLVQGAIWVVMLFAAYYIATRIVQMSGRSVRPREDIPSSLRMHRNAIFVFLAGLILTFLGGAPAAIGALVCGTFGAGFLLSGFASFHFRTRGKSWRLPVLWIAYLSVLVFTIPAVFFLLSGLTDTRRTIAVTPAGKS
>NZ_CP023070.1|WP_014327824.1|798261_798837_-|50S-ribosomal-protein-L9
MEVILLERIAKLGQMGETVKVRDGFARNYLLPLGKALRANAANKARFDSERATLEARNLERKSEAQTVAEKLDGKSFVIVRTAGETGQLYGSVAARDIVDVLAAEGFNINRNQVNLNQPIKSIGVHKVTLHLHAEVDVVVELNVARSAEEAERQAKGESLTSAEAIYGVDEDALKPEDFFNPEAEFAAEEE
>NZ_CP023070.1|WP_014327823.1|796334_797834_-|replicative-DNA-helicase
MNDAARKLAPLPKDQADQHYREAPNNLEAEQALLGAILVNNDAFYRVSDFLKPVHLYEPLHRKIFEVAGEIIRMGKTANPVTVKTFLKADDKVGDLTVAQYLARLAAEAVSIINAEDYGRAIYDLALRRSLITIGEDMVNIAFDAPLDMPPQSQIEDAERRLFELAETGRYDGGFQSFNDAVALAIDMAGQAFERDGHLSGISTGIHSLDGKMGGLQRSDLIILAGRPGMGKTSLATNIAYNIAASYEPEVQPDGSFKARNGGVVGFYSLEMSSEQLATRIISEQTEVSSSKIRRGDISEADFEKLVACSQMMQKVPLYIDQTGGISIAQLAARARRLKRQRGLDVLVVDYVQLMSGSKKSGENRVQEITEITTGLKALGKELNVPIIALSQLSRAVESREDKRPQLSDLRESGSIEQDADVVLFVFREEYYVKNMEPRDELDPKYEEWKMQMERVKGTADVIIAKQRHGPTGTVKLAFQSEFTRFSDLADPSFTQYEH
>NZ_CP023070.1|WP_014327822.1|795822_796128_+|AzlD-domain-containing-protein
MTLDLDTFLAIVAMAVATVLTRMAGLLVIRFVAIGPQQKRALEAIPPAVLMAVIAPTALATGPAETLATVATALAAMRLPLLAAVAIGVFVVAVARALIGA
>NZ_CP023070.1|WP_048655341.1|795172_795826_+|AzlC-family-ABC-transporter-permease
MAPLTVAVIPIGLVFGAVAASKGLSSFEATLMSVLVFAGGSQFVAMDIWTHPASWGALAFSALLVNIRHVLMSASIGTKMPAFSGPAKYAAMLLLADEIWAMAEVRAGENRLTPAWYAGLAVPFYCVWVLASLAGAAAGAFLGDPEAIGLDFAFPAVFTVLVMGFWKGRDTGAVLAASATAAVLAHQFLPGVWYIAAGAAAGVAATLVTNRHQEACA
>NZ_CP023070.1|WP_014327820.1|794198_795056_+|AraC-family-transcriptional-regulator
MHTISQEEAIEAMPLKGAEQTRFWRDARFNGMECLSATFITHEFAPHAHDTFSIGAIEAGSQISTIKGERSQTGPGDLYLINPDEVHDGHPGNDGYRYRMIYPSAALFVEILEDITGRPFRGTPCFSRQWLTDTELAAAFRRAHQLLEGKTGALEADEGMFGFLATLFERHGSAIIVPVRTRESSAVHRARDYLLENYSSDIGLDELAKVAGLSRAHLIRAFRKEFHITPHAFLTDKRVREARTLLRQGWSPADTAYHCGFADQAHFTRHFKARTGVTPGAFRAG
>NZ_CP023070.1|WP_014327819.1|792916_794056_-|alanine-racemase
MHSPEFLAASNRLTIDLTALADNWRAMNERSGKARAAAVLKANAYGIGVAHAAPTLYAAGARDFFVADAEEGAELRPLLPDARIYILAGMWPGNEELFFANDLVPIINSEEQLAVFMAALSERGDHPCVLHVDTGMNRLGLSVEEAIALAHDPARPASFSPVLVMSHLACGDDPRHPMNLYQLQRFREVTAAFEGVPASLANSGGVFLGEDYHFDLTRPGIAVYGGEAVNGALNPMKPVVTAEARILQLRTIPSGGTASYGASARFARDSRIATVAIGYADGYHRSVSGGGVTLRQATPSGAYGFLHGKKVPHVGRVTMDLSLFDVTDLPERAVRAGDYIELFGPNVAIDEVARAGGTIGYELLTSLGQRYCRTYVGGV
>NZ_CP023070.1|WP_014327818.1|791385_792789_-|DNA-repair-protein-RadA
MAKARTQFVCQNCGTLHSRWAGKCEGCGEWNTIIEEDPTGGIGGGPTRAPKKGRPVALTTLSGEIEDAPRIETGISELDRVTGGGFVRGSALLVGGDPGIGKSTVLMQAAAALSRRKHRVIYVSGEEAIAQVRLRAQRLGAADSDVLLAAETNVEDILATLSEGKRPDLVIIDSIQTLWSDTADSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGPRVVEHMVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDRGLREVANPSELFLGERNEKSPGAAVFAGMEGTRPLLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGVRLGQHDVYLNVAGGYRISEPAADLAVASALVSSLAGLALPADCVYFGEVSLSGAVRPVAHTAQRLKEAEKLGFSQAVLPSATTDLPKNGNGRWSEMESLPDLVARIAGSRRALQQSDEAE
>NZ_CP023070.1|WP_014327817.1|790645_791245_-|CvpA-family-protein
MPITILDGIVLGVALFSAILAMVRGFSREVLSVASWVGAAAAAYFLYPYLLPYAKQYTTNDTVAMIGSAAVIFLVALIIISFITMRIADFIIDSRIGALDRTLGFLFGAARGILLVVVAMLFFNWLVAPPQQPGWVTQAKSKPLLDNLGDKLVALLPEEADATILDRLRGKDTTGEGESDAPPAAPDQSPAEDAPATNG
>NZ_CP023070.1|WP_014327826.1|801109_801442_+|four-helix-bundle-copper-binding-protein
MHHIDPKMQECIENCLACYRACLSTAMNHCLEAGGKHTEPDHFRLMMACAEICRTSAHFMLIGTPHHRHVCGECAEICAECAADCERIGGMAECVDACQRCAESCRQMAA
>NZ_CP023070.1|WP_014327827.1|801477_802521_-|aldo/keto-reductase
MRYNTLGRTGIKVSEICLGTMTWGSQNTPIEAHGQLDYAFECGVNFIDTAELYPTTPLSAETYGNTERIIGDWLAGRRRRDDVVLATKVAGPGRPYIRNGGPMTPEGIAEALDASLTRLKTDYVDLYQLHWPNRGHYHFRNAWSYDPSRQDKAHVAADLRAILDKLGDLVKAGKIRAIGLSNDTAWGAMKMLDLSEKHGLPRVATVQNEYNLLYRAYDLDLAELSHHEDVGLLAYSPLAAGLLTGKYLDGARPAGSRLSINGDLGGRFTPHQEPAVAAYVALAREHGLDPAQMALAFCLTRPFMASVIIGATSIKQLKTDISAADIALSQDVLNGIRRLHRLYPAPI
>NZ_CP023070.1|WP_014327828.1|802851_803796_+|ACP-S-malonyltransferase
MSIAFTFPGQGSQAVGMGKDLADAFPEAAAVFAEVDDALGEKLSDTIWNGPEETLILTANAQPALMAVSIAVIRVLEARGLDLGSKVSFVAGHSLGEYSALCAAGTFSLADTARLLGIRGNAMQAAVPVGKGAMAAIIGLEHDDVEAVCREASSLGACQIANDNGGGQLVISGEKQAVEKAAALATEKGAKRALMLPVSAPFHSSLMAPAAEAMREALAKVEKRDPVVPVVANVLAAPVSDAGEVARLLVEQVTGQVRWRETVQWFAANDVTTLYEIGSGKVLTGLARRIDKTVNGIAVNTPADIDAALAALLA
>NZ_CP023070.1|WP_014327829.1|803822_804560_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MFDLSGRKALITGASGGIGEEIARMLHAQGAIVGLHGTRVEKLEALANSLGERVQIFPANLSDRAEVKALGEKAETELGGVDILVNNAGITKDGLFVRMSDEDWDNVLEVNLTAVFRLTRELTHPMMRRRFGRIVNITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEGIMAAIPMRRMGSGAEVASAVAYLASNEAGYVTGQTIHVNGGMAMI
>NZ_CP023070.1|WP_003531676.1|804898_805135_+|acyl-carrier-protein
MSDIAERVKKIVIDHLGVDAEKVSEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAADSILTVGDAVKFIEKAQA
>NZ_CP023070.1|WP_037391159.1|805350_806616_+|beta-ketoacyl-ACP-synthase-II
MRRVVITGTGMVSPLGCGTEVSWSRLLAGGNAARKVTEFEVEDLPAKIACRIPFGDGSDGTFHADDWMEPKEQRKVDPFITYAMAAADMALADAGWKPESDEDQIATGVLIGSGIGGLEGIVEGGYTLRDKGPRRLSPFFIPGRLINLASGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDDPQRASRPYDADRDGFVMGEGAGIVILEELEHAKARGAKIYAEVVGYGLSGDAFHITAPSEDGDGAYRCMQMALKRAGLTAADVDYINAHGTSTMADTIELGAVERLVGDSASRISMSSTKSAIGHLLGAAGAVEAIFSALAIRDNVAPPTLNLDNPSVETKIDLVPHVARKREINVALSNSFGFGGTNASLVLRRYKAD
>NZ_CP023070.1|WP_014327831.1|806901_808089_+|endolytic-transglycosylase-MltG
MSDSNENSAAQFGRNETGSNGPIIPKSANEALRPERVPEPPKRSRKARSQVVIFLNFLMTVVVFVALAAAGAVYYAMHAYEKPGPLEANQNFIVRSGAGIIEIAEGLERNNIITDSRVFRFVSEAYLDNETLKAGEYEIKAHASMQEIMELLKSGKSILYAVSLPEGLTVKQMFRKLSDDPVLVGDLPADLPAEGTLKPDTYKFTRGTKRAEIVQQMVSAQKALVEQIWEKRDPELPVTSVEEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAILKSDLEKETPYNTYLIKGLPPTPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAATLDEHNANVRRWRKLEAEKAAEAAKAAADAATAPDAQ
>NZ_CP023070.1|WP_014327832.1|808293_809181_+|YicC-family-protein
MPLQSMTGFARREGSSGRYRWAWELRSVNGKGLDVRLRLPQGLERFEPECRRLAPQYFSRGNLQIALSVSGGETAVEAVINRGALDAVLKLREQLGDLVDPTPLRFDTLLSLRGIIDLREPEESETERSARDADIVKGLELSLADLMAMRKDEGTALEKVLLAQVERIEELTATVENDPSRSPSAIAARLAQQVALIMDNASSIDRERLHAEVALLATKADLREEVDRLRSHIAAARELLTKGGPVGRKLDFLAQEFNRESNTICSKSNAAAVSAAGIELKVVIDQFREQVQNLE
>NZ_CP023070.1|WP_014327833.1|809184_809844_+|guanylate-kinase
MKSAAASPIKIARRGLMLVISSPSGAGKSTIARNLLRDDPELSISVSVTTRQRRHSEIEGQHYYFKTVREFDALRATDSLLEWAEVHGNFYGTPRDAVEAAMAEGRDMLFDIDWQGAQQLQEKMAGDVVSIFILPPSMAELQSRLHRRAEDTEEVIATRLANSRAEIEHWREYDYIVVNDDLDRAFSSVRSIIEAERLRRDRRPGLFEFVNGLLTENPF
>NZ_CP023070.1|WP_037431273.1|809973_810798_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MAALDGLPPLRDVIQRHGLDAKKALGQNFLLDLNLTQKIARTAGPLDDITVIEVGPGPGGLTRAILALGAKKVVAIERDPRCLPALAEISGHYPGRLDVVEGDALKVDFESLGEGPVRIIANLPYNVGTQLLVNWLLPERWPPFWQSMTLMFQREVALRIVAGADDDHYGRLGVLCGWRTKARLAFDVPPQAFTPPPKVTSTVVHLEPTDNPIPCAVSALEKVTQAAFGQRRKMLRQSLKPIGGEALLGKAGIDPQRRAETLTVEEFCRLANCL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1239470 : 1253599

uncultured_Mediterranean_phage(81.82%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162129704.1\|1239470_1240334_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	8.1e-33	35.3
WP_014328223.1\|1240326_1241052_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.7e-39	45.2
WP_014328224.1\|1241124_1242234_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-29	37.6
WP_014328225.1\|1242326_1242533_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	2.8e-08	68.2
WP_014328226.1\|1242606_1243320_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_014328227.1\|1243316_1244159_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	7.7e-44	41.4
WP_014328228.1\|1244198_1245482_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.5e-102	46.7
WP_037393414.1\|1245507_1246278_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.3e-25	33.6
WP_014328230.1\|1246274_1246928_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.8e-16	34.0
WP_014328231.1\|1247087_1247738_+	hypothetical protein	NA	NA	NA	NA
WP_037393411.1\|1247902_1249444_+	LysM peptidoglycan-binding domain-containing protein	Q8SBN9	Clostridium_phage	5.6e-16	35.9
WP_037429911.1\|1249476_1250352_-	ATP-binding protein	NA	NA	NA	NA
WP_014328234.1\|1250651_1250984_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-11	38.8
WP_037393390.1\|1251028_1253599_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.3e-53	44.0

DBSCAN-SWA_2

1402776 : 1450967

Rhizobium_phage(21.62%)

capsid,head,tail,terminase,portal,integrase

attL 1449593:1449620|attR 1452651:1452678

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037435911.1\|1402776_1403109_-	hypothetical protein	A0A291AUJ8	Sinorhizobium_phage	6.1e-05	39.0
WP_157750282.1\|1403108_1403273_-	hypothetical protein	NA	NA	NA	NA
WP_037431627.1\|1403269_1403707_-	hypothetical protein	NA	NA	NA	NA
WP_037431626.1\|1403703_1404045_-	hypothetical protein	NA	NA	NA	NA
WP_037431624.1\|1404127_1404358_-	hypothetical protein	NA	NA	NA	NA
WP_095689684.1\|1404443_1404779_-	helix-turn-helix transcriptional regulator	J7FAF1	Agrobacterium_phage	4.0e-12	47.8
WP_037431619.1\|1405203_1405425_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_157750284.1\|1405521_1405719_+	hypothetical protein	NA	NA	NA	NA
WP_037431616.1\|1405728_1406085_+	hypothetical protein	A0A068CE49	Rhizobium_phage	6.6e-13	44.3
WP_037431614.1\|1406193_1406541_-	helix-turn-helix transcriptional regulator	A0A068C9F0	Rhizobium_phage	2.0e-27	45.6
WP_037431611.1\|1406636_1406879_+	helix-turn-helix transcriptional regulator	A0A068CDI1	Rhizobium_phage	5.3e-14	55.4
WP_095689685.1\|1407144_1407612_+	hypothetical protein	A0A291AUS4	Sinorhizobium_phage	2.4e-23	44.4
WP_037431582.1\|1407611_1408049_+	hypothetical protein	A0A068CE53	Rhizobium_phage	1.7e-26	51.2
WP_050994634.1\|1408045_1408342_+	hypothetical protein	NA	NA	NA	NA
WP_157750286.1\|1408380_1409109_+	hypothetical protein	A0A291AUK6	Sinorhizobium_phage	3.2e-06	27.0
WP_037431605.1\|1409384_1410494_+	hypothetical protein	A0A068C9F4	Rhizobium_phage	2.9e-123	63.6
WP_037431579.1\|1410490_1411432_+	site-specific DNA-methyltransferase	A0A1B0VM49	Pseudomonas_phage	2.0e-101	56.8
WP_037431577.1\|1411428_1411743_+	hypothetical protein	NA	NA	NA	NA
WP_037431574.1\|1411729_1413754_+	DNA cytosine methyltransferase	R9TP91	Rhizobium_phage	1.0e-219	58.9
WP_037431572.1\|1413753_1415052_+	helix-turn-helix domain-containing protein	A0A291AUS5	Sinorhizobium_phage	2.9e-42	37.0
WP_037431570.1\|1415035_1415674_+	hypothetical protein	NA	NA	NA	NA
WP_037431604.1\|1416056_1416413_+	HNH endonuclease	I3ULZ4	Rhodobacter_phage	6.5e-37	63.5
WP_037431602.1\|1416491_1416977_+	hypothetical protein	I3ULZ5	Rhodobacter_phage	2.8e-30	47.7
WP_037431568.1\|1416960_1418661_+\|terminase	terminase large subunit	I3ULZ6	Rhodobacter_phage	1.4e-190	61.6
WP_080579087.1\|1418675_1420625_+\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	5.3e-165	51.8
WP_037431564.1\|1421299_1421620_+	hypothetical protein	NA	NA	NA	NA
WP_037431560.1\|1421619_1422966_+\|portal	phage portal protein	F8TVA0	EBPR_siphovirus	2.5e-145	61.6
WP_080579086.1\|1422962_1423958_+	hypothetical protein	F8TVA1	EBPR_siphovirus	8.8e-23	39.5
WP_086021516.1\|1423965_1424304_+\|head,tail	phage gp6-like head-tail connector protein	B5WZS4	Pseudomonas_phage	8.4e-18	46.5
WP_037431556.1\|1424335_1424593_+	hypothetical protein	NA	NA	NA	NA
WP_037431555.1\|1425206_1425932_+	hypothetical protein	A0A2P0VNH9	Tetraselmis_virus	1.2e-40	38.9
WP_157750288.1\|1425928_1426651_+	hypothetical protein	A0A2K9L3I9	Tupanvirus	2.5e-11	29.5
WP_037431553.1\|1426647_1427067_+	adenylyltransferase/cytidyltransferase family protein	A0A218MKF4	uncultured_virus	1.7e-20	46.1
WP_037431552.1\|1427063_1427807_+	hypothetical protein	NA	NA	NA	NA
WP_050994630.1\|1427803_1428442_+	FkbM family methyltransferase	K4JUF8	Caulobacter_phage	1.6e-14	34.5
WP_157750290.1\|1428489_1429368_+	hypothetical protein	NA	NA	NA	NA
WP_037431549.1\|1429364_1429724_+\|head	phage head closure protein	A0A141GEW5	Brucella_phage	1.4e-34	64.2
WP_086021515.1\|1429735_1430191_+	HK97 gp10 family phage protein	B4UTQ0	Rhizobium_phage	1.3e-13	38.0
WP_037431545.1\|1430187_1430601_+	DUF3168 domain-containing protein	A0A141GEW7	Brucella_phage	4.0e-14	40.6
WP_037431544.1\|1430679_1431123_+	hypothetical protein	A0A2D2W2I6	Sinorhizobium_phage	8.2e-13	39.1
WP_037431542.1\|1431122_1431512_+	gene transfer agent family protein	B4UTQ4	Rhizobium_phage	5.1e-11	38.8
WP_157750292.1\|1431690_1431852_-	hypothetical protein	NA	NA	NA	NA
WP_050994629.1\|1431985_1435135_+	TIGR02594 family protein	A0A1V0EEJ8	Caulobacter_phage	7.4e-23	39.6
WP_037431539.1\|1435138_1436332_+	hypothetical protein	A0A0N9ERB2	Pseudomonas_phage	2.8e-07	21.6
WP_037431535.1\|1436328_1437186_+	phage BR0599 family protein	A0A1V0DX31	Synechococcus_virus	1.9e-53	40.0
WP_037431532.1\|1437195_1437423_+	hypothetical protein	M4R174	Loktanella_phage	1.6e-12	51.7
WP_037431531.1\|1437419_1437611_+	hypothetical protein	A0A2D0W9I0	Bordetella_phage	8.9e-09	48.3
WP_095689687.1\|1437603_1442727_+	hypothetical protein	G8DCR8	Silicibacter_phage	1.2e-120	32.9
WP_037431523.1\|1442777_1443791_+	acyltransferase	B5WZU0	Pseudomonas_phage	7.8e-35	32.5
WP_037431519.1\|1444745_1444961_+	hypothetical protein	NA	NA	NA	NA
WP_037431518.1\|1444960_1445386_+	hypothetical protein	NA	NA	NA	NA
WP_050999880.1\|1445333_1445636_+	hypothetical protein	NA	NA	NA	NA
WP_037431512.1\|1445691_1446033_+	DUF1515 family protein	A0A291AUW4	Sinorhizobium_phage	3.5e-32	64.1
WP_095689690.1\|1446803_1447796_+	ATP-dependent DNA ligase	A0A291AUP8	Sinorhizobium_phage	1.2e-136	75.6
WP_037431504.1\|1447785_1448349_-	hypothetical protein	NA	NA	NA	NA
WP_157750296.1\|1448364_1449411_-	hypothetical protein	NA	NA	NA	NA
1449593:1449620	attL	NA	NA	NA	NA
WP_037431500.1\|1449641_1450967_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_037431500.1\|1449641_1450967_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1452651:1452678	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1848019 : 1859791

Sulfitobacter_phage(60.0%)

portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014328774.1\|1848019_1849378_-\|tail	tail fiber domain-containing protein	M4NM77	Sulfitobacter_phage	2.6e-41	33.1
WP_014328775.1\|1849437_1849890_-	GNAT family N-acetyltransferase	X2CY06	Brucella_phage	4.9e-37	53.6
WP_037434232.1\|1849886_1851497_-	hypothetical protein	A0A088F6U1	Sulfitobacter_phage	1.8e-81	37.9
WP_014328777.1\|1851496_1852099_-	hypothetical protein	A0A088FAT4	Sulfitobacter_phage	1.7e-16	33.0
WP_014328778.1\|1852095_1852692_-	hypothetical protein	A0A2K9VHC9	Pseudomonas_phage	5.7e-09	25.4
WP_014328779.1\|1852688_1853012_-	hypothetical protein	F8TUS1	EBPR_podovirus	3.7e-23	49.5
WP_014328780.1\|1853008_1853185_-	hypothetical protein	NA	NA	NA	NA
WP_014328781.1\|1853251_1854247_-	DUF5309 domain-containing protein	A0A088FAT7	Sulfitobacter_phage	4.4e-131	71.9
WP_014328782.1\|1854408_1855362_-	hypothetical protein	A0A088F6W8	Sulfitobacter_phage	3.3e-35	38.5
WP_014328783.1\|1855521_1855758_-	hypothetical protein	NA	NA	NA	NA
WP_014328784.1\|1856306_1858361_-\|portal	phage portal protein	A0A088F830	Sulfitobacter_phage	6.6e-198	58.7
WP_037434226.1\|1858360_1859791_-	DNA packaging protein	C8CLI4	Xylella_phage	3.1e-170	64.3

DBSCAN-SWA_4

2341837 : 2397712

Klosneuvirus(14.29%)

tRNA,transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037436541.1\|2341837_2342557_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_037436544.1\|2342745_2342958_-	hypothetical protein	NA	NA	NA	NA
WP_095689705.1\|2343037_2346067_-	calcium-binding protein	NA	NA	NA	NA
WP_095689706.1\|2346331_2349370_-	calcium-binding protein	NA	NA	NA	NA
WP_037436205.1\|2349921_2351022_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012708843.1\|2351075_2351387_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_037436202.1\|2351563_2352667_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_014329133.1\|2352706_2353162_+	MaoC family dehydratase	NA	NA	NA	NA
WP_080578672.1\|2353158_2353629_+	MaoC family dehydratase	NA	NA	NA	NA
WP_037400797.1\|2353710_2354253_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.2e-36	44.8
WP_037436199.1\|2354550_2354736_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_037436197.1\|2354751_2356011_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A1B0V011	Roseobacter_phage	3.6e-53	43.1
WP_014329137.1\|2356007_2356640_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_014329138.1\|2356636_2357260_-	DUF1285 domain-containing protein	NA	NA	NA	NA
WP_037436196.1\|2357526_2358540_+	MoxR family ATPase	NA	NA	NA	NA
WP_014329140.1\|2358543_2359464_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_095689707.1\|2359460_2362274_+	DUF4159 domain-containing protein	NA	NA	NA	NA
WP_037436187.1\|2362281_2364351_+	membrane protein	NA	NA	NA	NA
WP_014329144.1\|2364825_2365386_-	N-acetyltransferase	NA	NA	NA	NA
WP_014329145.1\|2365637_2366615_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_014329146.1\|2366990_2367479_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_086020626.1\|2367709_2368470_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.1e-24	50.0
WP_014329147.1\|2368834_2369743_+	metallophosphoesterase	NA	NA	NA	NA
WP_014329148.1\|2369914_2370460_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_014329149.1\|2370639_2371158_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_037428979.1\|2371161_2371989_+	anti-sigma factor	NA	NA	NA	NA
WP_037428982.1\|2372188_2373898_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_037396119.1\|2374325_2374910_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.1e-28	37.3
WP_037428984.1\|2375141_2375720_+	HupE/UreJ family protein	NA	NA	NA	NA
WP_014329155.1\|2375867_2376332_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.0e-29	48.6
WP_037428999.1\|2376328_2377249_-	cation transporter	NA	NA	NA	NA
WP_037469635.1\|2377428_2379618_-	anthranilate synthase	NA	NA	NA	NA
WP_037428988.1\|2379908_2382014_-	TonB-dependent receptor	NA	NA	NA	NA
WP_037428990.1\|2382269_2383085_+	extensin family protein	NA	NA	NA	NA
WP_037428992.1\|2383085_2383544_-	YiiD C-terminal domain-containing protein	NA	NA	NA	NA
WP_037428994.1\|2383698_2384208_+	DUF1993 domain-containing protein	NA	NA	NA	NA
WP_037428995.1\|2384229_2385909_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_037428997.1\|2385996_2387217_-	DUF2333 family protein	NA	NA	NA	NA
WP_037396098.1\|2387220_2388510_-	hypothetical protein	NA	NA	NA	NA
WP_014329165.1\|2388702_2389110_-	DUF559 domain-containing protein	NA	NA	NA	NA
WP_042777459.1\|2389378_2391295_-	ATP-binding protein	NA	NA	NA	NA
WP_037429004.1\|2391296_2392445_-	hypothetical protein	NA	NA	NA	NA
WP_037396079.1\|2392506_2393595_-	hypothetical protein	NA	NA	NA	NA
WP_037396078.1\|2393809_2394397_-	thymidine kinase	A7XF40	Enterobacteria_phage	3.1e-52	54.6
WP_037396076.1\|2394680_2395637_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037396090.1\|2395820_2396666_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_014329172.1\|2396662_2397712_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-20	32.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023072

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16669 : 164288

Gordonia_phage(15.0%)

transposase,integrase

attL 100039:100098|attR 129020:129145

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086018618.1\|16669_17769_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	41.4
WP_042779412.1\|19517_20609_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_042779412.1\|20694_21786_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_095689811.1\|22522_23524_-\|integrase	tyrosine-type recombinase/integrase	A0A160DCT0	Gordonia_phage	1.9e-12	28.6
WP_066005166.1\|24820_25870_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_014857758.1\|25955_26858_-	hypothetical protein	NA	NA	NA	NA
WP_037427384.1\|26854_28405_-	hypothetical protein	NA	NA	NA	NA
WP_078070838.1\|28540_30601_-	cytochrome P450	NA	NA	NA	NA
WP_034859623.1\|30812_31121_-	ferredoxin	NA	NA	NA	NA
WP_095689812.1\|31122_32430_-	cytochrome P450	NA	NA	NA	NA
WP_015633479.1\|33129_33363_-	hypothetical protein	NA	NA	NA	NA
WP_157750340.1\|34069_34261_+	hypothetical protein	NA	NA	NA	NA
WP_086021548.1\|36288_37302_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_014328473.1\|37400_38321_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.0e-29	34.3
WP_161623564.1\|38317_39802_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_161623566.1\|40108_40429_-\|transposase	transposase	NA	NA	NA	NA
WP_095689849.1\|41485_45115_+	hypothetical protein	NA	NA	NA	NA
WP_015633423.1\|45256_45703_-	hypothetical protein	NA	NA	NA	NA
WP_080579334.1\|45699_46056_-	hypothetical protein	NA	NA	NA	NA
WP_015633421.1\|46851_47658_+	hypothetical protein	NA	NA	NA	NA
WP_034859947.1\|49101_49566_+	phasin	NA	NA	NA	NA
WP_080579360.1\|51070_51796_-	2-O-methyltransferase NoeI	A0A2P0VP97	Tetraselmis_virus	3.3e-11	28.3
WP_095689814.1\|51881_52085_-	hypothetical protein	NA	NA	NA	NA
WP_095689850.1\|52739_54323_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_015633430.1\|57897_58869_+	hypothetical protein	NA	NA	NA	NA
WP_050994801.1\|62187_63744_+	hypothetical protein	NA	NA	NA	NA
WP_157750341.1\|63964_64303_+	hypothetical protein	NA	NA	NA	NA
WP_037426177.1\|65659_66082_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015633379.1\|66078_66948_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	2.8e-25	29.3
WP_037427413.1\|67485_68781_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_037427675.1\|69833_70595_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.1e-71	55.6
WP_095689815.1\|70610_72152_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	5.0e-126	43.9
WP_037436672.1\|74945_75635_+	OmpW family protein	NA	NA	NA	NA
WP_078070374.1\|76074_76308_-	hypothetical protein	NA	NA	NA	NA
WP_078070375.1\|76306_77020_+	hypothetical protein	NA	NA	NA	NA
WP_037436679.1\|78087_78546_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_078070376.1\|85478_86027_+	YecA family protein	NA	NA	NA	NA
WP_080579337.1\|87346_87586_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
WP_157750342.1\|88409_88658_+	hypothetical protein	NA	NA	NA	NA
WP_078070378.1\|89444_90197_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_080579338.1\|90456_91023_+	hypothetical protein	NA	NA	NA	NA
WP_095689851.1\|91648_92482_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_037436876.1\|92792_94055_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_010875278.1\|94051_94282_-	helix-turn-helix transcriptional regulator	A0A0K1LLP9	Caulobacter_phage	7.2e-05	42.9
WP_162130067.1\|94819_95167_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_095678161.1\|98511_99771_-	TRAP transporter large permease subunit	NA	NA	NA	NA
100039:100098	attL	NA	NA	NA	NA
WP_037427235.1\|100164_101406_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	3.0e-12	29.0
WP_095689786.1\|101402_102326_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_095689787.1\|102322_103324_+\|integrase	tyrosine-type recombinase/integrase	A0A160DCT0	Gordonia_phage	1.4e-12	28.7
WP_095689816.1\|104770_105808_-	transketolase family protein	NA	NA	NA	NA
WP_095689817.1\|105804_106644_-	transketolase	NA	NA	NA	NA
WP_037436789.1\|106675_107437_-	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	1.7e-10	25.1
WP_037436792.1\|107584_108481_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	8.5e-17	28.3
WP_037436794.1\|108881_111062_-	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	1.1e-41	32.8
WP_153297037.1\|116043_116349_+	hypothetical protein	NA	NA	NA	NA
WP_162832844.1\|117058_117217_+	hypothetical protein	NA	NA	NA	NA
WP_014857797.1\|117915_118518_+	hypothetical protein	NA	NA	NA	NA
WP_034859822.1\|118548_118734_+	hypothetical protein	NA	NA	NA	NA
WP_050994795.1\|119418_120609_+	NAD-dependent epimerase/dehydratase family protein	A0A2H4X257	Flamingopox_virus	3.6e-07	30.1
WP_037436658.1\|120605_120959_+	hypothetical protein	NA	NA	NA	NA
WP_037436665.1\|120975_121368_+	hypothetical protein	NA	NA	NA	NA
WP_050994796.1\|121382_122864_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_080579323.1\|123250_123697_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_080579326.1\|123708_124047_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.5e-30	55.4
WP_095689818.1\|125793_126795_-\|integrase	tyrosine-type recombinase/integrase	A0A160DCT0	Gordonia_phage	1.9e-12	28.7
WP_095689786.1\|126791_127715_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_037427235.1\|127711_128953_-\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	3.0e-12	29.0
WP_037436078.1\|129204_129438_-	hypothetical protein	NA	NA	NA	NA
129020:129145	attR	NA	NA	NA	NA
WP_037436076.1\|131220_132291_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_162832842.1\|132309_133779_-	UbiA family prenyltransferase	NA	NA	NA	NA
WP_037436075.1\|134376_135018_-	HAD family hydrolase	NA	NA	NA	NA
WP_037436073.1\|135192_136488_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_037436072.1\|136570_137500_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_050994777.1\|137511_138345_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_037436071.1\|138388_139456_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	1.0e-24	31.9
WP_037436070.1\|139452_140055_-	phosphoenolpyruvate hydrolase family protein	NA	NA	NA	NA
WP_037436069.1\|140187_141396_+	Tm-1-like ATP-binding domain-containing protein	NA	NA	NA	NA
WP_037436068.1\|141385_142243_+	phosphoenolpyruvate hydrolase family protein	NA	NA	NA	NA
WP_037436067.1\|142266_142896_+	cupin domain-containing protein	NA	NA	NA	NA
WP_037436065.1\|142936_144025_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_037436064.1\|144044_145874_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_037436056.1\|149026_149257_-	helix-turn-helix transcriptional regulator	A0A0K1LLP9	Caulobacter_phage	3.8e-06	47.6
WP_095689819.1\|149999_150902_-	hypothetical protein	NA	NA	NA	NA
WP_095689820.1\|150898_152449_-	hypothetical protein	NA	NA	NA	NA
WP_095689821.1\|152582_153581_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_095689822.1\|153730_155074_-	cytochrome P450	NA	NA	NA	NA
WP_037437109.1\|155073_155910_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.2e-14	30.0
WP_095689852.1\|155896_156205_-	ferredoxin	NA	NA	NA	NA
WP_095689823.1\|156206_157496_-	cytochrome P450	NA	NA	NA	NA
WP_037436962.1\|157590_158793_-	cytochrome P450	NA	NA	NA	NA
WP_100209506.1\|159084_159363_-	DUF4158 domain-containing protein	NA	NA	NA	NA
WP_037436960.1\|159528_160761_-	cytochrome P450	NA	NA	NA	NA
WP_095689853.1\|163253_164288_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

229304 : 301688

Acidithiobacillus_phage(23.08%)

transposase,integrase

attL 237889:237907|attR 240110:240128

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037437180.1\|229304_230726_-\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	4.7e-70	34.7
WP_037434276.1\|231004_231790_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_050994701.1\|232030_233227_-	hypothetical protein	NA	NA	NA	NA
WP_037434283.1\|233531_234707_+	alanine racemase	NA	NA	NA	NA
WP_050994700.1\|235145_236021_+	TIGR01459 family HAD-type hydrolase	NA	NA	NA	NA
WP_037434275.1\|236074_236773_-	response regulator transcription factor	NA	NA	NA	NA
237889:237907	attL	NA	NA	NA	NA
WP_080579189.1\|238237_238780_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_157750345.1\|240909_241980_+	acyl-CoA-6-aminopenicillanic acid acyltransferase	NA	NA	NA	NA
240110:240128	attR	NA	NA	NA	NA
WP_037434270.1\|242493_243255_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	2.2e-18	32.5
WP_157750346.1\|244141_244480_-\|transposase	transposase	NA	NA	NA	NA
WP_037434281.1\|244913_245675_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	1.2e-19	32.5
WP_050994698.1\|245874_246936_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_050994697.1\|246977_248087_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-27	32.7
WP_050994696.1\|248083_248914_+	ABC transporter permease	NA	NA	NA	NA
WP_080579190.1\|249060_249870_+	ABC transporter permease	NA	NA	NA	NA
WP_037434268.1\|250172_251174_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_037434267.1\|251183_251831_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_037434266.1\|252248_253823_+	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_037434265.1\|253845_255222_+	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_037434264.1\|255524_256883_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	2.3e-45	42.7
WP_037434263.1\|257116_258073_-	transaldolase	A0A0E3FGE1	Synechococcus_phage	7.9e-13	29.1
WP_050994695.1\|258222_259074_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_095689830.1\|259108_260470_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_037434257.1\|260833_261976_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_157750347.1\|262118_262421_+	hypothetical protein	NA	NA	NA	NA
WP_037434256.1\|262534_262855_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_037434255.1\|262847_264230_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_037434254.1\|264226_265354_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_037434253.1\|265558_265981_+	endoribonuclease	NA	NA	NA	NA
WP_037434252.1\|266579_267680_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_037434251.1\|267757_268840_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	3.3e-15	28.9
WP_037434250.1\|268836_269724_+	ABC transporter permease	NA	NA	NA	NA
WP_037434249.1\|269720_270563_+	ABC transporter permease	NA	NA	NA	NA
WP_080579187.1\|272094_272271_-	Hin recombinase	NA	NA	NA	NA
WP_037434246.1\|272897_273818_+	DMT family transporter	NA	NA	NA	NA
WP_037434261.1\|276509_277355_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_037434244.1\|277458_278613_+	M20 family metallopeptidase	NA	NA	NA	NA
WP_037434243.1\|279299_279776_+	RidA family protein	NA	NA	NA	NA
WP_037434242.1\|279779_280982_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_080579185.1\|281933_282959_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.8e-18	34.3
WP_050994692.1\|282955_283972_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-11	29.1
WP_037434241.1\|283968_284862_-	ABC transporter permease	NA	NA	NA	NA
WP_037434240.1\|284863_285802_-	ABC transporter permease	NA	NA	NA	NA
WP_037434239.1\|285830_287414_-	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA
WP_037434238.1\|287851_288265_+	hypothetical protein	NA	NA	NA	NA
WP_037434237.1\|291150_292587_-	amidase	NA	NA	NA	NA
WP_050994693.1\|293057_294161_-	threonine aldolase family protein	NA	NA	NA	NA
WP_037434236.1\|294518_294971_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_037434235.1\|295196_296153_+	aminotransferase class IV	NA	NA	NA	NA
WP_037434234.1\|296333_297521_+	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	8.3e-36	28.5
WP_095689831.1\|297712_298393_+\|transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	7.4e-21	46.3
WP_037427675.1\|299369_300131_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.1e-71	55.6
WP_037437027.1\|300146_301688_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	3.9e-126	43.9

DBSCAN-SWA_3

325035 : 377351

Enterobacteria_phage(22.22%)

transposase,integrase

attL 369079:369106|attR 372453:372480

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037435898.1\|325035_326298_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.3e-47	38.1
WP_037435879.1\|326294_327176_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	6.1e-52	46.3
WP_014327878.1\|327282_328116_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_037436812.1\|330610_331411_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.8e-58	45.2
WP_080579332.1\|331571_332810_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.4e-31	32.1
WP_037436810.1\|333937_334636_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_095689853.1\|336069_337104_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_095689832.1\|337258_337690_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_037435551.1\|340162_341218_+	hypothetical protein	NA	NA	NA	NA
WP_050994753.1\|341228_342287_+	PLP-dependent cysteine synthase family protein	NA	NA	NA	NA
WP_037435548.1\|342283_344986_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_037435546.1\|346159_347389_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_037435544.1\|347974_349018_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_095689833.1\|349448_351251_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.5e-33	28.7
WP_157750349.1\|353996_354239_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_037435536.1\|354251_354569_-	hypothetical protein	NA	NA	NA	NA
WP_095689835.1\|356384_357785_+	hypothetical protein	NA	NA	NA	NA
WP_037435529.1\|358351_358549_+	hypothetical protein	NA	NA	NA	NA
WP_037435537.1\|362165_363197_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_157750351.1\|365703_365919_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_037435521.1\|367895_368180_-	hypothetical protein	NA	NA	NA	NA
369079:369106	attL	NA	NA	NA	NA
WP_095689787.1\|369194_370196_-\|integrase	tyrosine-type recombinase/integrase	A0A160DCT0	Gordonia_phage	1.4e-12	28.7
WP_095689786.1\|370192_371116_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_037427235.1\|371112_372354_-\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	3.0e-12	29.0
WP_057220201.1\|372906_373086_+	hypothetical protein	NA	NA	NA	NA
372453:372480	attR	NA	NA	NA	NA
WP_095689837.1\|373072_375142_+	recombinase family protein	K4JU73	Streptococcus_phage	1.5e-08	21.3
WP_037435640.1\|376599_376947_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-27	58.1
WP_037435642.1\|376943_377351_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

425653 : 486194

Paenibacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095689838.1\|425653_426688_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_014327878.1\|427080_427914_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_086020626.1\|428013_428774_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.1e-24	50.0
WP_080579319.1\|429568_430006_+	hypothetical protein	NA	NA	NA	NA
WP_050994790.1\|430137_431655_-	radical SAM family RiPP maturation amino acid epimerase	NA	NA	NA	NA
WP_037436576.1\|431731_432109_-	hypothetical protein	NA	NA	NA	NA
WP_010875135.1\|432755_433208_-	nitrogenase stabilizing/protective protein NifW	NA	NA	NA	NA
WP_037436573.1\|433371_434535_-	cysteine desulfurase NifS	H7BUW1	unidentified_phage	3.4e-34	35.1
WP_095689839.1\|435335_437327_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037427441.1\|438718_439126_+	phasin family protein	NA	NA	NA	NA
WP_010875130.1\|440044_440935_+	nitrogenase iron protein	NA	NA	NA	NA
WP_037436943.1\|441030_442542_+	nitrogenase molybdenum-iron protein alpha chain	NA	NA	NA	NA
WP_095689840.1\|442637_444179_+	nitrogenase molybdenum-iron protein subunit beta	NA	NA	NA	NA
WP_080579242.1\|444431_444920_+	NifX-associated nitrogen fixation protein	NA	NA	NA	NA
WP_010875126.1\|444942_445146_+	hypothetical protein	NA	NA	NA	NA
WP_037435246.1\|445450_445753_+	exopolysaccharide production repressor	NA	NA	NA	NA
WP_050988395.1\|446179_447697_+	tryptophan 7-halogenase	Q58MD8	Prochlorococcus_phage	2.1e-31	24.6
WP_010875122.1\|447825_448764_-	transcriptional regulator NodD2	NA	NA	NA	NA
WP_014857541.1\|449083_449290_+	hypothetical protein	NA	NA	NA	NA
WP_014857543.1\|450458_451139_+	winged helix-turn-helix domain-containing protein	W8CYM9	Bacillus_phage	3.8e-17	26.5
WP_037426125.1\|451162_452590_+	type II and III secretion system protein family protein	NA	NA	NA	NA
WP_014857545.1\|452599_453166_+	CpaD family pilus assembly lipoprotein	NA	NA	NA	NA
WP_014857546.1\|453610_454627_-	type II secretion system effector nodulation protein NopL	NA	NA	NA	NA
WP_037426130.1\|454884_456099_-	MFS transporter	NA	NA	NA	NA
WP_037426133.1\|456095_457982_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
WP_014857549.1\|457981_459121_-	NAD/NADP octopine/nopaline dehydrogenase family protein	NA	NA	NA	NA
WP_037426137.1\|459117_460128_-	cysteine synthase family protein	NA	NA	NA	NA
WP_037426141.1\|460128_461490_-	Y4yA family PLP-dependent enzyme	NA	NA	NA	NA
WP_014857553.1\|461489_461918_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_037426143.1\|462102_463893_-	type II secretion system effector nodulation protein NopX	NA	NA	NA	NA
WP_032490256.1\|464174_464879_-	nodulation protein NolW	NA	NA	NA	NA
WP_037435248.1\|465034_465529_+	nodulation protein NolB	NA	NA	NA	NA
WP_037426145.1\|465538_466408_+	nodulation protein NolT	NA	NA	NA	NA
WP_015633406.1\|466404_467043_+	nodulation protein NolU	NA	NA	NA	NA
WP_037426152.1\|467044_467671_+	nodulation protein NolV	NA	NA	NA	NA
WP_037426155.1\|467667_469023_+	type III secretion system ATPase SctN	NA	NA	NA	NA
WP_014857562.1\|468998_469535_+	hypothetical protein	NA	NA	NA	NA
WP_037426158.1\|469581_470637_+	type III secretion system cytoplasmic ring protein SctQ	NA	NA	NA	NA
WP_037426161.1\|470629_471298_+	type III secretion system export apparatus subunit SctR	NA	NA	NA	NA
WP_014857565.1\|471294_471573_+	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA
WP_037426165.1\|471581_472400_+	type III secretion system export apparatus subunit SctT	NA	NA	NA	NA
WP_014857567.1\|472396_473434_+	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA
WP_014857569.1\|474230_475043_+	effector protein NopP	NA	NA	NA	NA
WP_010875097.1\|475744_476041_+	nodulation protein NopC	NA	NA	NA	NA
WP_037426169.1\|476433_477324_+	hypothetical protein	NA	NA	NA	NA
WP_014857573.1\|477512_479606_+	type III secretion system export apparatus subunit SctV	NA	NA	NA	NA
WP_015633401.1\|479622_480171_+	hypothetical protein	NA	NA	NA	NA
WP_034859758.1\|481045_481483_-	hypothetical protein	NA	NA	NA	NA
WP_037426177.1\|481925_482348_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015633379.1\|482344_483214_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	2.8e-25	29.3
WP_095678047.1\|484451_485285_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_086022824.1\|485440_486194_+\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.3e-10	37.0

DBSCAN-SWA_5

495388 : 562046

Acidithiobacillus_phage(15.0%)

transposase,integrase

attL 512289:512316|attR 515663:515690

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095678167.1\|495388_496475_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.8e-44	44.7
WP_078070781.1\|496763_497150_+	potassium-transporting ATPase subunit C	NA	NA	NA	NA
WP_034859283.1\|497042_497981_-	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	3.5e-90	50.6
WP_014857595.1\|497995_499051_-	GDP-mannose 4,6-dehydratase	M1HKK4	Acanthocystis_turfacea_Chlorella_virus	4.5e-126	64.3
WP_037427231.1\|499295_500264_-	nodulation protein NodZ	NA	NA	NA	NA
WP_034859288.1\|500578_501994_-	phosphomannomutase	NA	NA	NA	NA
WP_050988434.1\|502140_503595_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.3e-50	27.8
WP_014857603.1\|504323_505289_+	transcriptional regulator NodD1	NA	NA	NA	NA
WP_015633385.1\|505888_506320_+	helix-turn-helix transcriptional regulator	A0A223W054	Agrobacterium_phage	2.9e-23	46.3
WP_014857606.1\|506465_506912_+\|transposase	transposase	NA	NA	NA	NA
WP_014857607.1\|507042_507660_+	hypothetical protein	NA	NA	NA	NA
WP_010875074.1\|508183_508615_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.9e-22	47.1
WP_037437180.1\|509654_511076_-\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	4.7e-70	34.7
WP_014330935.1\|511218_511509_-	hypothetical protein	NA	NA	NA	NA
WP_100209413.1\|511538_512153_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
512289:512316	attL	NA	NA	NA	NA
WP_037427235.1\|512414_513656_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	3.0e-12	29.0
WP_095689786.1\|513652_514576_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_095689787.1\|514572_515574_+\|integrase	tyrosine-type recombinase/integrase	A0A160DCT0	Gordonia_phage	1.4e-12	28.7
WP_057220201.1\|516116_516296_+	hypothetical protein	NA	NA	NA	NA
515663:515690	attR	NA	NA	NA	NA
WP_095689837.1\|516282_518352_+	recombinase family protein	K4JU73	Streptococcus_phage	1.5e-08	21.3
WP_014330938.1\|519840_520188_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.4e-38	64.5
WP_014330939.1\|520184_520577_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_095689815.1\|520779_522321_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	5.0e-126	43.9
WP_037427675.1\|522336_523098_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.1e-71	55.6
WP_014331726.1\|523694_525104_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_014331725.1\|525090_525828_-	hypothetical protein	NA	NA	NA	NA
WP_172900205.1\|527001_528714_-	recombinase family protein	NA	NA	NA	NA
WP_086021547.1\|532422_532686_-	Y4bD/Y4pK family protein	NA	NA	NA	NA
WP_037427476.1\|533775_535128_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	7.0e-55	47.4
WP_095678168.1\|535636_536374_-	hypothetical protein	NA	NA	NA	NA
WP_037427474.1\|536677_537100_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_010875326.1\|537096_537354_-	plasmid stability protein stbC	NA	NA	NA	NA
WP_037427472.1\|537671_537968_+	DUF2604 domain-containing protein	NA	NA	NA	NA
WP_037427479.1\|537960_538566_+	hypothetical protein	NA	NA	NA	NA
WP_037427470.1\|538562_539051_+	Mov34/MPN/PAD-1 family protein	NA	NA	NA	NA
WP_037427469.1\|539053_540613_+	E2 ligase fold family C protein	NA	NA	NA	NA
WP_014857619.1\|541332_541590_+	hypothetical protein	A0A2I7REY7	Vibrio_phage	4.9e-10	49.2
WP_095678116.1\|542203_543241_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_080579349.1\|544749_544935_+	hypothetical protein	NA	NA	NA	NA
WP_014858081.1\|545143_545524_+	hypothetical protein	NA	NA	NA	NA
WP_034859708.1\|545742_546228_+	hypothetical protein	NA	NA	NA	NA
WP_080579355.1\|547878_549702_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.6e-33	31.6
WP_080579353.1\|549812_550262_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	5.2e-07	40.4
WP_037437091.1\|550242_550596_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.2e-20	48.4
WP_095689837.1\|552065_554135_-	recombinase family protein	K4JU73	Streptococcus_phage	1.5e-08	21.3
WP_057220201.1\|554121_554301_-	hypothetical protein	NA	NA	NA	NA
WP_080579355.1\|554933_556757_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.6e-33	31.6
WP_037427413.1\|558085_559381_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_095689841.1\|561212_562046_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

573143 : 592310

Lactococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095689842.1\|573143_573806_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_014327878.1\|573888_574722_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_034859666.1\|574966_575824_+	hypothetical protein	NA	NA	NA	NA
WP_109023434.1\|576938_577655_+\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_014330979.1\|577939_579685_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_014328473.1\|581116_582037_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.0e-29	34.3
WP_161623564.1\|582033_583518_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_109023434.1\|583757_584474_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_037436867.1\|584672_585017_-	hypothetical protein	NA	NA	NA	NA
WP_162109203.1\|586107_586482_-	hypothetical protein	NA	NA	NA	NA
WP_050988452.1\|586405_587539_+	tagatose-6-phosphate kinase	NA	NA	NA	NA
WP_050988451.1\|587516_588038_+	sugar isomerase	NA	NA	NA	NA
WP_037427532.1\|588042_589152_+	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	4.8e-46	33.7
WP_078070510.1\|589258_589945_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_037427530.1\|590206_590980_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_095678167.1\|591223_592310_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.8e-44	44.7

DBSCAN-SWA_7

657490 : 702621

Paenibacillus_phage(20.0%)

transposase,integrase

attL 647777:647791|attR 660267:660281

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
647777:647791	attL	NA	NA	NA	NA
WP_037437931.1\|657490_658360_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.2e-33	34.3
WP_095678109.1\|658369_659545_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_037427862.1\|659956_660331_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.0e-24	47.3
660267:660281	attR	NA	NA	NA	NA
WP_172900202.1\|660327_660537_+\|transposase	transposase	NA	NA	NA	NA
WP_037437027.1\|660690_662232_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	3.9e-126	43.9
WP_037427675.1\|662247_663009_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.1e-71	55.6
WP_037427348.1\|663129_663336_+\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	5.9e-06	43.3
WP_157213238.1\|663476_663644_-	hypothetical protein	NA	NA	NA	NA
WP_037436984.1\|663987_665013_+	porin	NA	NA	NA	NA
WP_157213237.1\|665106_665544_-	hypothetical protein	NA	NA	NA	NA
WP_078070844.1\|666148_666352_+	GFA family protein	NA	NA	NA	NA
WP_037427337.1\|666883_668110_-	monooxygenase	NA	NA	NA	NA
WP_037427335.1\|668144_668927_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.4e-12	25.2
WP_037427333.1\|668984_670343_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_095689846.1\|671675_672761_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_037427331.1\|673646_674438_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-11	23.0
WP_037427278.1\|677975_678428_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_157213233.1\|679437_681762_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	1.7e-08	26.4
WP_037427270.1\|681807_682542_-	response regulator transcription factor	NA	NA	NA	NA
WP_050988439.1\|684218_686699_+	EAL domain-containing protein	G3MA91	Bacillus_virus	2.4e-21	30.8
WP_095678164.1\|686758_687331_-	hypothetical protein	NA	NA	NA	NA
WP_050994765.1\|687751_688237_-	NUDIX hydrolase	A0A2H4IB87	Erwinia_phage	1.8e-13	35.9
WP_037435819.1\|688527_690522_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_080579329.1\|693968_694634_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_037427488.1\|694630_695044_+	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_037427491.1\|697396_698146_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_014327878.1\|701787_702621_-\|transposase	IS5 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP023071

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023071_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023071_1

834165-834350

Orphan

Consensus_repeat	Method
TGTCGTTGCCGTCACCGCCTTCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP023071_1

>merge|NZ_CP023071|1|834165-834350|CRISPRCasFinder
TGTCGTCGCCGTCATCCCCGAAGGCGATGTCGTTGCCGTTACCGACCGAGATCCTGTCGTTGCCGATGCCGCCGTGGGCTTCGTCGATTCCAGTTTCGGAATCGAGCACGTCATTGCCGTCGCCGCCATCGAGATAGTTGTTCCCGTCGCCGCCATCGACGATGTCGTCGCCGATGCCGCCATAGA

>NZ_CP023071|1|1|834165-834350|CRISPRCasFinder
TGTCGTCGCCGTCATCCCCGAAG	GCGATGTCGTTGCCGTTACCGACCGAGATCC
TGTCGTTGCCGATGCCGCCGTGG	GCTTCGTCGATTCCAGTTTCGGAATCGAGCA
CGTCATTGCCGTCGCCGCCATCG	AGATAGTTGTTCCCGTCGCCGCCATCGACGA
TGTCGTCGCCGATGCCGCCATAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023071.1\|WP_037435525.1\|822355_823594_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270453
NZ_CP023071.1\|WP_037431946.1\|837824_840086_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP023071.1\|WP_037431951.1\|832608_833571_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP023071.1\|WP_037431956.1\|826112_828014_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|180120
NZ_CP023071.1\|WP_037431955.1\|828010_828817_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl\|CDD\|224139
NZ_CP023071.1\|WP_037431954.1\|828859_830821_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|132152
NZ_CP023071.1\|WP_037431944.1\|840825_841317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023071.1\|WP_086021520.1\|836304_837501_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340837
NZ_CP023071.1\|WP_037431959.1\|823801_825031_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP023071.1\|WP_037431964.1\|821376_822258_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP023071.1\|WP_162832830.1\|830862_831603_+\|histidinol-phosphatase	unknown	unknown	gnl\|CDD\|224305
NZ_CP023071.1\|WP_037431943.1\|841553_841901_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023071.1\|WP_037431961.1\|842304_842610_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023071.1\|WP_037431938.1\|843127_844777_+\|response-regulator	unknown	unknown	gnl\|CDD\|223411
NZ_CP023071.1\|WP_037431932.1\|850205_851207_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP023071.1\|WP_037431957.1\|825213_826113_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP023071.1\|WP_037431948.1\|835149_836232_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340836
NZ_CP023071.1\|WP_037431933.1\|848001_849912_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227903
NZ_CP023071.1\|WP_037431952.1\|831599_832592_+\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|237195
NZ_CP023071.1\|WP_060563891.1\|844814_847784_+\|response-regulator	unknown	unknown	gnl\|CDD\|236848

Protein	Function_ID	Function_description	E-value
NZ_CP023071.1\|WP_037435525.1\|822355_823594_-\|extracellular-solute-binding-protein	gnl\|CDD\|270453	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold. This group represents the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.79422e-95
NZ_CP023071.1\|WP_037431946.1\|837824_840086_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP023071.1\|WP_037431951.1\|832608_833571_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	9.8894e-49
NZ_CP023071.1\|WP_037431956.1\|826112_828014_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|180120	PRK05506, PRK05506, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional.	0
NZ_CP023071.1\|WP_037431955.1\|828010_828817_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl\|CDD\|224139	COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism].	1.00746e-115
NZ_CP023071.1\|WP_037431954.1\|828859_830821_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|132152	TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.	1.02502e-160
NZ_CP023071.1\|WP_060563891.1\|844814_847784_+\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	2.14027e-155
NZ_CP023071.1\|WP_086021520.1\|836304_837501_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340837	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.	5.27164e-132
NZ_CP023071.1\|WP_037431959.1\|823801_825031_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.79447e-51
NZ_CP023071.1\|WP_037431964.1\|821376_822258_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.34377e-87
NZ_CP023071.1\|WP_162832830.1\|830862_831603_+\|histidinol-phosphatase	gnl\|CDD\|224305	COG1387, HIS2, Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only].	9.72916e-48
NZ_CP023071.1\|WP_037431932.1\|850205_851207_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	0.00516107
NZ_CP023071.1\|WP_037431938.1\|843127_844777_+\|response-regulator	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	1.2915e-172
NZ_CP023071.1\|WP_037431957.1\|825213_826113_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP023071.1\|WP_037431948.1\|835149_836232_-\|glycosyltransferase	gnl\|CDD\|340836	cd03807, GT4_WbnK-like, Shigella dysenteriae WbnK and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.	8.77777e-105
NZ_CP023071.1\|WP_037431933.1\|848001_849912_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	4.72132e-59
NZ_CP023071.1\|WP_037431952.1\|831599_832592_+\|ATP-grasp-domain-containing-protein	gnl\|CDD\|237195	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional.	3.48608e-131

>NZ_CP023071.1|WP_037431951.1|832608_833571_+|NAD(P)-dependent-oxidoreductase
MSPKELVITGATGFIGTRLIEHALARGDAVTALVRDPERVTVRKHTRLRIEQWSIGEPLPSVRQADALLHLAAFIPADLSDPHQAAKCFELNTNGALQVAMDAASQDVQQFVHFGSGQVYTPAPEPASETSPAFPVNRASYYLASKLSAEICLLAFGKAKGIPVTVLRPASVYGPGMHGKGMVTAFIRALACGQPVIIRDGGAYRVDLVYVDDVASLALEAVAAESEGVFNAGSGQACTSLEAARIIAEVIGADPSLIRVEGEDRDAAAAGFAALNVARAAEQLAYTPRAFRQGIEAWKVETGLADFQSASGKTNTASRT
>NZ_CP023071.1|WP_037431952.1|831599_832592_+|ATP-grasp-domain-containing-protein
MKVFITGAGALLGQGIIRALRRSTLRATIIVGDPSPLSAGLYWGDAAYLVPMAKDPDYLDRLGDLLRVERPDILIPGTDVELPILSANREAIETTYGTKVIISSPHVVSVANDKWLTSEFLRERGLGFVPSCLPGDEEALIEECGFPLIVKPRIGARSIGFGIVRDRDQLKRAIAEQPGIVIQKYVGSDATEYTAGTLTFDGQCRATIVMRRDLRDGNTYRAFAEPFPALNAAMAQAADALGAYGPANFQFRLDDGVPRIFEINARFSGTTAVRIHAGFNEVEMCIRLLLFGEPVVQPEITPVTILRHWSETVVRSGELVTASARLEEEA
>NZ_CP023071.1|WP_162832830.1|830862_831603_+|histidinol-phosphatase
MEPQRKTDSGKPVFSRFRGLSREQLNVELQVHTNWTDGEATVLEVLQTAKKRGLAELAFTEHVREDTSWFPDFKAEIYSAVDAVGDMRVYVGCETKAMDDDGRLDVSQSVLDACDIVLGVVHRLPDGQGGYLDFKQLSFEETAEIEFRLSMGMIANAPIDVLGHPGGMSLRRYGRFPEDYFRALMKATLERGIAIEINSSYLDDMPGFLALCDEINPFVSIGSDAHKLSELGRCRDRLLELGVGLT
>NZ_CP023071.1|WP_037431954.1|828859_830821_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGIAGLIDYAHRGREEVAQILTRMTDALAHRGPDASGTWLDHERRVGLGHRRLSIIDLSPTGAQPMHSSSGRYSIVFNGEIYGFLGLRAALEEQGARFRGHSDTEVLLEAIETYGLESALQRSNGMFAFALYDSATRHIIFARDRIGKKPLYIGVSKSGVAFGSELKSIRAHPSFRSVEVDPQAATLFLRYGYVPTPYSIYRDIFKLPHGSWLSLSVDTPPVSASAALSGAKSYWDAFEAAERGYAQRIECPDEALDALDAELKRAVSERLVSDVPVGALLSSGVDSSLVSAVMQEVSTSRVKTYTVRFLEEQYNEADLASGIARQLGTDHTEITAEPDTALRIVTELPDVYDEPFADPSQIPTLLVSKLARRTVTVALSGDGGDEFFGGYKRYRQMLAFDRLARKTPVVALRAARHAPHWALEFAAAAARHARPSSLQDEVTGKRLRRLAELLEIEDPDARYLDFRTLWSHPADVVFGGAEPPTAMTSKRIPACLGAVDRMMYRDMVDYLPDDILVKMDRASMAVGLEMRAPLLDYRFVELAWRAPRELCFAEAPGKPALRKLLSRRLPEQFINLSKRGFGVPVNAWLRGPLRAWAEEMLSPSRLQRDGIFRAEPIVSRWKAHLAGRVDWGPQLWAVLMFNLWHDRWVRSD
>NZ_CP023071.1|WP_037431955.1|828010_828817_+|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MTPLCELFERIVLEAGASILAVYEAGPTICYKDDRSPVTEADQRAEAIILDRLAAAFPHIPVVAEEAVASGCVPDISCGTFFLVDPLDGTKEFINRRDDFTVNIALIEGNLPVAGIVYAPAQRCAYVADKGRAEKLVFGAGAVVGHRQAIQVRPRGPALTAVASRSHNSSETEAFLAGHGVTDYTSVGSSLKFCLLAEGKADVYPRFGRTMEWDTAAGDAVLNAAGGSVVRLDGSRLLYGKMKQPDDSDFANPHFVAWADMSPVLAAL
>NZ_CP023071.1|WP_037431956.1|826112_828014_+|sulfate-adenylyltransferase-subunit-CysN
MSYLQSVPPHDLGAHLAEHDSKTVLRFITCGSVDDGKSTLIGRLLFDAKLIFEDQLTNLGRVGSPGTANGEEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAVILIDSRQGILPQTRRHSYIASLLGIRHLVLAVNKFDLVEFRQSVFDEIARDYRAFAKKLGFVSIQSIPISARFGDNVISASQNTPWYKGPALLEYLETVQLDPPAAERPFRLPVQLVMRPHADFRGYAGQIASGRISVGDPVVVAKSGQHSSVEAIVTFDGNLPTAAEGEAVTLVLADEVDASRGNMLVAPAARPFVADQFQAHVIWFDASPMLPGRGYILRTETDSVSATVTALKHQVNINSFAREAAKSLQMNEVGVCNISTQAPIVFDAYKDNRATGNFVFVDRATNATVGAGMIDFPLRRADNVHWQATDVNKAARSAMKSQRPAVLWFTGLSGSGKSTIANALDRLLHARGKHTYMLDGDNVRHGLNRDLGFTEADRVENIRRVAEVAKLMADAGLIVLVSFISPFRGERQMARELMEECEFIEIFVDTPLEECARRDPKGLYEKALAGKIANFTGVSSPYEAPENPELHLKTVEEDPTTLALKIEAFLDGQRGDR
>NZ_CP023071.1|WP_037431957.1|825213_826113_+|sulfate-adenylyltransferase-subunit-CysD
MSLANLRRLEAEAIHVLREVVATFSNPVVLYSIGKDSSVLLHLALKAFYPAKPPFPFLHVDTTWKFREMITFRDRMTQELGFNLLVHINQDGVDQGVGPFTHGSNLHTHVMKTMALRQALEKYRFDAALAGARRDEEKSRAKERVFSIRNAQHGWDPQRQRPEMWKTYNTRVGAGETMRVFPLSNWTEFDIWQYILQENIAIVPLYFAARRPVVSRDGMLIMIDDDRMPLEPGEEVMDRMVRFRTLGCYPLTGAIDSEAATVPDILREMLTVRTSERQSRLIDTDEAGAMEKKKREGYF
>NZ_CP023071.1|WP_037431959.1|823801_825031_+|ROK-family-transcriptional-regulator
MNEMRPIRAKSGTNQEGASAHNRRVMIDALRVNGQLSRADLARATALTKQAVSNIIEDLERDGLVASLAAVRKGRGQPSTPYRLVPEGAFAIGLQIDRHMTRTIAVDLVGAVLARGEANLPAGGPERGTETILWLIDKTRRELAEVAPQSKDRLVGLGVAMPGPFGIDTDPADPWMMALWQRFPLSETLAIGTGLDVRLQNDSAAAATAEKLVGAAHGLDQAICIYVGYGIGAGLILDGELYRGANGNAGEIGMILSRPENGTEDQRAPLEHRASIASLCKILDRDPADPELYRHLDDFAAASDARIAAWITEAAYELRRAVQILETIFDPQTIVLCGGMPPGLARLLIDAIHPLLPSIAERRTRSAPRLQLGFTDPWAVAIGAAAEPISRTFDPSFSAILKTRSVGSG
>NZ_CP023071.1|WP_037435525.1|822355_823594_-|extracellular-solute-binding-protein
MLKSTRNALLGATLLGLTFAGQAYAETTLNALFMAQAAYSEADVRAMTEAFTKANPDVKVNLEFVPYEGLHDKTVLAQGSGGGYDVVLFDVIWPAEYASNKVLVDVTDRVTDEMNKGILPGAWTTVEYDGKRYGMPWILDTKYLFYNKEILEKAGIKAPPKTWDELAEQAKAIKDKGLLQTPIAWSWSQAEAAICDYTTLVSAYGGKFLDGGKPAFMTGGGLDALNYMVTSYTSGLTNPNSKEFLEEDVRKVFQNGEAAFALNWTYMYNLANDPKESKVAGKVGVVPAPGVTGKSEVSAVNGSMGLGITATSKHPEEAWKYIVHMTSQETQNAYAKLSLPIWASSYEDASVTKGQEELIAAAKLGLAAMYPRPTTPKYQELSTALQQAIQEALLGQASPEDALKTAAENSGL
>NZ_CP023071.1|WP_037431964.1|821376_822258_-|sugar-ABC-transporter-permease
MSANWISTRAWLLMLPLLVVMVSVIGWPLVDTVRLSFTDAKLVGTAGSFVGIDNYAKMLTGSNFQRALVTTTWFAVVSVTAEMVLGVFAALLLNQQFRGRAALRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLGLIDSYRSWLGEPGSALTALIIADCWKNFPLVALIALAALQAVPRDITAAALVDGAGPFNRFRFVVMPYLAGPLLVALVLRTIEAFKVFDIIWVMTRGGPANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALLRRAAGAS
>NZ_CP023071.1|WP_037431948.1|835149_836232_-|glycosyltransferase
MIMHVITNFTASAGAETMLARLLHGSADEHIVVVSLIGISDRNRNLADNPRVAYVSLAASSFAALPGAILRLARLIRKEHPDVILCWMYHAMIVGTIAAQLARSGAAVYWNIRQSLDDPASLTRNSRLAIAGARLLSRRPAGIIYNSARALELHRSYGYANRNMVVIPNGFELPRIDPTEATTARRIGIVGRFHPQKDHGTFFKAVAAVRKTHPQALFSAAGNGLSRDNRAVIDLMAEAGLPEHAIDLRGEISDMPSYYRSIDALVLSSRTEGFPNVIAEAMSYAKPIVTTDVGDAAAVTGNAGIAVPPRDPDALAGAIRSILDLSPSEYARYAHQARNRVESEYAITAIAAKYAAFLKR
>NZ_CP023071.1|WP_086021520.1|836304_837501_-|glycosyltransferase-family-4-protein
MQTEDVASLTRRPDAAYPPARRRVIAIVASLAASLTLFRLELLKRLASAGHDVIAFAPEDDPRVEQALAEIGVRFIRIPMARTGLNPLEDIRTFWSLRQHFKRVKPDMIIPYTMKPIIYAGIAARTLGIKERCFLVTGLGHVFSEVGGRSFKALAIRHLCVRLYRMAFRRATVVFVYNDADAEDIRRYHMLPDAVSPTMVHGSGVDLEHFAFAQPTGGGPVFLMVARLLRDKGVVEYIEAARIVRRSFPDARFQLLGHFDSNPTAISREDINDWISEGILDYLGTTDDVRPYLVACNVFVLPSYYREGIPRSILEALATGRPVITTDLPGCRDTVEPGVNGMTVKPLDVMALADAMALFARDPDLSESMGRRSRELAEKKFDVHMINRVLLAGMGLTD
>NZ_CP023071.1|WP_037431946.1|837824_840086_-|polysaccharide-biosynthesis-protein
MQRFYNAAKAVRDSFLMLPRGEAARSSAKVLLAVCGAALDIGFRRLRGAVFSVQNYPALYVADLGSAGIALAMALLLRYGFAELSTRPETASVLLWSGAQYIAICAIIFPLSGLYSRNWKYGSISDLLIILRAVLVTSLLLISLLFFSTRLTDMPRTVVPMQSLLLIAFLAAARLSFRAEEIPLARPVFKNGRHKGAGDDHQVPLLLVGAGDAAELYLRALARDSNATHVPVACLDKDADQLGMSLRGVPIAGRVEDFERVVAELEQINKRPRHVVFTEAPANFGETASDELLRSADRLGIAVSRLSQLTELKLAKGDNPYELRSIELTDLLERPQAALDREAIARLVRGRRVLITGAGGSIGSELTAQVAACEPAEIVLVDNSEYNLYAIDMTLTETFPKVSRWSYLCSVRRNQRVEEIFDRHRPELVFHAAALKHVPMVQMNPREGVLTNVIGTMNVANAAKKYGTLAMVQVSTDKVVNSTSVMGATKRLAELYCQALDLHGLETAKGPRFMTVRFGNVLGSSGSLIPLFKRQLARGGPLTVTDPCMTRFFMTIREAVELTLQASAYGFEKQLGQGEIFVLDMGEPVKIVDIARRMIRLAGFTPDQDIEIKIIGCRPGEKLYEELFDESDKRTTSPVPGVLGAVPEPIPLPTLRNAFARLQRDAERGNDSAVISVMRELLPRYEHDADNTEPPAMKKKRGLLQPKSRSKTGAPRRQIYQKSARSGLRNLPKERPRRDSVAGLIEKWEARFA
>NZ_CP023071.1|WP_037431944.1|840825_841317_+|hypothetical-protein
MQARSVIEIAESGGRLPTELIMVGYWASQAGVVVFVLNGVAPQAINLVLDPIVATLPLSIPGVLYVSINDKARVCEAVRCADEIYAATRTFRRLTALYGISPRLVRSVVTAIPSLESRTLLSEKDARAPKPAGPHIVMPFPAMNRVRWGATDTTTKHPAKAAV
>NZ_CP023071.1|WP_037431943.1|841553_841901_+|hypothetical-protein
MDISASDRELIAVMRQYFAAKAELESLKEQLEAARQATSAAIGVFYDPRQNAEHAGDLQRSHRLKGEMASLMQRAEAWGRAALTADRRDRSEWEAEPEPEEWQSFERRADTLFGA
>NZ_CP023071.1|WP_037431961.1|842304_842610_-|hypothetical-protein
MAEPDRWRHMASAPKNGSRILVTIRPSEQGAAEVDLAYWSNGDQFGAEGWRASDSSPGRIIEYAEPELKCWMPMPSANLDRTSMPSPWEGDDDQELNGSGI
>NZ_CP023071.1|WP_037431938.1|843127_844777_+|response-regulator
MSDQTVRVLLVEDNPLHAKLIQRLLDTEMQLHCEVVAVDRLADGLGQLERGATDLVLLDLILPDSHELETLFRIRAAAPDVPVVILTGLDDVKLAAHAVEAGASDFLLKTRLNGVALDRAIRYTLARKRAHGGEWDSPMFRLAQQQFLKAAQIMNLDDNIRQRLLFPQRTQVVSFPFFRDDRAQVETVFGYRVQHVLTMGPTKGGIRYHEDVDLGDVAALATLMTWKCALMRLPFGGAKGGVRVDPTVLSKSELQRLTRRYTAEIIDIIGPDKDIPAPDMGTDEQVMAWVMDTYSQQVGHAVPAVVTGKPVVLGGSLGRKEATGRGLVYVIEAAAEAIRLDMAKSNAVVQGFGNVGSFAARFLAEAGVKIIAVSDVSTGLYNANGLSVNALLEYVAKNRVLAGFPDAEPISNAELLELECDVLVLAALQNQVTAENAERIKCRLLAEGANGPTTLEADEILNERGVHIIPDILGNAGGVTVSYFEWVQGLQNLTWTLDEINYRLKAILLDAFARTRRRAEDDQLDLRTAALIEGIARVTQAKLLRGLFP
>NZ_CP023071.1|WP_060563891.1|844814_847784_+|response-regulator
MTKNTDTTHASCSDHTLAEQLEAALAARARAEAARDSLLDGIESALEGFVLYDADDRMVAFNSRFEKLFSPRVAMGMRFEDLIRSAVEQGLAPVGELGVEEWVARRMERHRNPGPPFKLRLNNGTWIRISEGRTRDGGLVGAYTDITELEEQREHLEELVKTTEAATARAEAAQRQLLDAIESSLEGFALYDASDRLVVYNSRYRDFFSGPERAVLPAEPFAVETPGASFELVIRTFAESGLSSLDGQTVDEWIAQRLERHRNPRGPFNLKHQDGTTIRVSERKTSDGGTICVYSDITELEEHRHRLEELVAKRTAKLEQRTEQLRKSREELERARDAAEQASIAKSEFLANMSHEIRTPMNGVIGIAELLEGTELSDQQRRYVSIILHSADTLMDLINDILDFSKIEAGRLELETIPFMLRDTLGDTLQTLAKRAADKGLELACHIPPEVPDHLMGDPTRLRQIIVNLVGNAIKFTENGEVVVDVTLVGQGDQGARLQFDVRDTGIGIPAAQQERIFEAFAQADTSTTRQYGGTGLGLAIAAQLAEKMGGPMQLDSKPGVGSVFTFAADFVLAPEAQKARPVREAELRGRRVLVVDDNATNRQILEEIVVNWGMIPIVAVDGAAALNALEQASGALPDLALLDVMMPRMSGFELAACMRLRPALKETRIVMMSSAGRPSDEALLRKLDVSRLLVKPVKQSDLLNAITNALGFSMREDELEGTASPARLRTGPGLTVLLAEDGAVNRQVAVDLLTKRGHRVEAVGNGQEAVEAAEHGSYDLVLMDVHMPVMDGLAATTAIRALARAECARVPIIALTASATPADRERCLAAGMDGYVTKPFRASELFRVVEQYQPKPASAVAGPATAIPEQPAAAEASALDWDGALSNLDGDAALLRELAAMFLVEYPKLTAAIDAAHAGGDAAELRRAAHTLKGAADVIGAGGVVTAAQRLANLGREGRLEPVPEAQRALAAELDRLRPLLQRAASGA
>NZ_CP023071.1|WP_037431933.1|848001_849912_+|adenylate/guanylate-cyclase-domain-containing-protein
MERKLAAIVAGDIVGYARLMSEDESSTYAALRATFSELIVPTVEKHGGRTFKTTGDGFLATFPSVNEALDAAIEIQNGFVDRPFSMRIGINLGDVIEDNGDMFGDGVNVASRLEAMAAPASIFVSEAVVRSADRTRNKLFYSIGRRQAKNIAEPLAVYAVRLEPDRLGGRAWIRRIALRRRAALPFAVGAAGLIVLAVFTQVPDLRAIGADLTDSFVRLSGGKPADARPTVAVLPFDNMSGETDQAYFADGLTEDIIANLARNPELQVIARNSTFALRGQAEDIRRIGERLGAGYVVEGSARRAGDQLRVVAQLIDARSGAHLWSRTYDRRVEDVFALQTDLTAEIVSHLVSYVRESEVSNAAERPTENLQAYDLVLKARDGYKHGSNDAEALMAARALLHRALELDPGYAAARANLGMTYIVDFAQNLSGRASQTDVETGLSEARQAVRLDPNLAVGYQVLSFGLSVNGDYASAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVRNAERARRLHPMAPEYYTYVYGQALYAAGRLDEADQVLRECLIRAPREADCLLIHTAVLIQREDVQGAQRTMALLTDVDPEFSLADERANRRFGNSRLMEQFLEQLAEARAPDATSGILSPRRPLL
>NZ_CP023071.1|WP_037431932.1|850205_851207_-|DMT-family-transporter
MDKRFSIGVFAALFAAFAFSLNFIVPFIIGDYSTFDFALVRHVVSALVGLCILFSGKGVMQHLTLRNWLSTTWLAFIGYVGYFLTVTGAAIFAGPVIAPAFLGLVPIVLAIIGNQRQGSLPWRFLMMPLMLVLIGLVLVNGSAFTAEGLKSVRSLWIGIPLALAAVALWVWFAIANEAAIATRPEMPSAVWSALTLVGGGVLMLAFYPIGAAMHLFQLPRLGFEWNAAGWLYLWGISLALLATVGGVWAWNVASRTLPVALTAQLIVAETAFGVIGGLIVHGRWPTAMEVTGVAILIAGVVLSIRVFHKSQVRSGKALSRESCISRRGLTAAS

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Crispr_ID: NZ_CP023071_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023071_2

834510-834640

Orphan

Consensus_repeat	Method
TGTCGTTGCCGTCACCGCCTTCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023071_2

>merge|NZ_CP023071|2|834510-834640|CRISPRCasFinder
TGTCGTCGCCGTAACCTGCGTCGATATATTCTTCGCCTGCTCCACCGTAGATCTTGTCGTTTCCGCCGTCGCCCAGGATGTGGTCGTGGCCGTCACCACCGTCGATGATGTCGTTGCCGTCACCGCCTTCG

>NZ_CP023071|2|2|834510-834640|CRISPRCasFinder
TGTCGTCGCCGTAACCTGCGTCG	ATATATTCTTCGCCTGCTCCACCGTAGATCT
TGTCGTTTCCGCCGTCGCCCAGG	ATGTGGTCGTGGCCGTCACCACCGTCGATGA
TGTCGTTGCCGTCACCGCCTTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023071.1\|WP_037435525.1\|822355_823594_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270453
NZ_CP023071.1\|WP_037431946.1\|837824_840086_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP023071.1\|WP_037431951.1\|832608_833571_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP023071.1\|WP_037431956.1\|826112_828014_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|180120
NZ_CP023071.1\|WP_037431955.1\|828010_828817_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl\|CDD\|224139
NZ_CP023071.1\|WP_037431954.1\|828859_830821_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|132152
NZ_CP023071.1\|WP_037431944.1\|840825_841317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023071.1\|WP_086021520.1\|836304_837501_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340837
NZ_CP023071.1\|WP_037431959.1\|823801_825031_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP023071.1\|WP_037431964.1\|821376_822258_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP023071.1\|WP_162832830.1\|830862_831603_+\|histidinol-phosphatase	unknown	unknown	gnl\|CDD\|224305
NZ_CP023071.1\|WP_037431943.1\|841553_841901_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023071.1\|WP_037431961.1\|842304_842610_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023071.1\|WP_037431938.1\|843127_844777_+\|response-regulator	unknown	unknown	gnl\|CDD\|223411
NZ_CP023071.1\|WP_037431932.1\|850205_851207_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP023071.1\|WP_037431957.1\|825213_826113_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP023071.1\|WP_037431948.1\|835149_836232_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340836
NZ_CP023071.1\|WP_037431933.1\|848001_849912_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227903
NZ_CP023071.1\|WP_037431952.1\|831599_832592_+\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|237195
NZ_CP023071.1\|WP_060563891.1\|844814_847784_+\|response-regulator	unknown	unknown	gnl\|CDD\|236848

Protein	Function_ID	Function_description	E-value
NZ_CP023071.1\|WP_037435525.1\|822355_823594_-\|extracellular-solute-binding-protein	gnl\|CDD\|270453	cd14750, PBP2_TMBP, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose; possesses type 2 periplasmic binding fold. This group represents the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.79422e-95
NZ_CP023071.1\|WP_037431946.1\|837824_840086_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP023071.1\|WP_037431951.1\|832608_833571_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	9.8894e-49
NZ_CP023071.1\|WP_037431956.1\|826112_828014_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|180120	PRK05506, PRK05506, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional.	0
NZ_CP023071.1\|WP_037431955.1\|828010_828817_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl\|CDD\|224139	COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism].	1.00746e-115
NZ_CP023071.1\|WP_037431954.1\|828859_830821_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|132152	TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.	1.02502e-160
NZ_CP023071.1\|WP_060563891.1\|844814_847784_+\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	2.14027e-155
NZ_CP023071.1\|WP_086021520.1\|836304_837501_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340837	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.	5.27164e-132
NZ_CP023071.1\|WP_037431959.1\|823801_825031_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.79447e-51
NZ_CP023071.1\|WP_037431964.1\|821376_822258_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.34377e-87
NZ_CP023071.1\|WP_162832830.1\|830862_831603_+\|histidinol-phosphatase	gnl\|CDD\|224305	COG1387, HIS2, Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only].	9.72916e-48
NZ_CP023071.1\|WP_037431932.1\|850205_851207_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	0.00516107
NZ_CP023071.1\|WP_037431938.1\|843127_844777_+\|response-regulator	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	1.2915e-172
NZ_CP023071.1\|WP_037431957.1\|825213_826113_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP023071.1\|WP_037431948.1\|835149_836232_-\|glycosyltransferase	gnl\|CDD\|340836	cd03807, GT4_WbnK-like, Shigella dysenteriae WbnK and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.	8.77777e-105
NZ_CP023071.1\|WP_037431933.1\|848001_849912_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	4.72132e-59
NZ_CP023071.1\|WP_037431952.1\|831599_832592_+\|ATP-grasp-domain-containing-protein	gnl\|CDD\|237195	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional.	3.48608e-131

>NZ_CP023071.1|WP_037431951.1|832608_833571_+|NAD(P)-dependent-oxidoreductase
MSPKELVITGATGFIGTRLIEHALARGDAVTALVRDPERVTVRKHTRLRIEQWSIGEPLPSVRQADALLHLAAFIPADLSDPHQAAKCFELNTNGALQVAMDAASQDVQQFVHFGSGQVYTPAPEPASETSPAFPVNRASYYLASKLSAEICLLAFGKAKGIPVTVLRPASVYGPGMHGKGMVTAFIRALACGQPVIIRDGGAYRVDLVYVDDVASLALEAVAAESEGVFNAGSGQACTSLEAARIIAEVIGADPSLIRVEGEDRDAAAAGFAALNVARAAEQLAYTPRAFRQGIEAWKVETGLADFQSASGKTNTASRT
>NZ_CP023071.1|WP_037431952.1|831599_832592_+|ATP-grasp-domain-containing-protein
MKVFITGAGALLGQGIIRALRRSTLRATIIVGDPSPLSAGLYWGDAAYLVPMAKDPDYLDRLGDLLRVERPDILIPGTDVELPILSANREAIETTYGTKVIISSPHVVSVANDKWLTSEFLRERGLGFVPSCLPGDEEALIEECGFPLIVKPRIGARSIGFGIVRDRDQLKRAIAEQPGIVIQKYVGSDATEYTAGTLTFDGQCRATIVMRRDLRDGNTYRAFAEPFPALNAAMAQAADALGAYGPANFQFRLDDGVPRIFEINARFSGTTAVRIHAGFNEVEMCIRLLLFGEPVVQPEITPVTILRHWSETVVRSGELVTASARLEEEA
>NZ_CP023071.1|WP_162832830.1|830862_831603_+|histidinol-phosphatase
MEPQRKTDSGKPVFSRFRGLSREQLNVELQVHTNWTDGEATVLEVLQTAKKRGLAELAFTEHVREDTSWFPDFKAEIYSAVDAVGDMRVYVGCETKAMDDDGRLDVSQSVLDACDIVLGVVHRLPDGQGGYLDFKQLSFEETAEIEFRLSMGMIANAPIDVLGHPGGMSLRRYGRFPEDYFRALMKATLERGIAIEINSSYLDDMPGFLALCDEINPFVSIGSDAHKLSELGRCRDRLLELGVGLT
>NZ_CP023071.1|WP_037431954.1|828859_830821_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGIAGLIDYAHRGREEVAQILTRMTDALAHRGPDASGTWLDHERRVGLGHRRLSIIDLSPTGAQPMHSSSGRYSIVFNGEIYGFLGLRAALEEQGARFRGHSDTEVLLEAIETYGLESALQRSNGMFAFALYDSATRHIIFARDRIGKKPLYIGVSKSGVAFGSELKSIRAHPSFRSVEVDPQAATLFLRYGYVPTPYSIYRDIFKLPHGSWLSLSVDTPPVSASAALSGAKSYWDAFEAAERGYAQRIECPDEALDALDAELKRAVSERLVSDVPVGALLSSGVDSSLVSAVMQEVSTSRVKTYTVRFLEEQYNEADLASGIARQLGTDHTEITAEPDTALRIVTELPDVYDEPFADPSQIPTLLVSKLARRTVTVALSGDGGDEFFGGYKRYRQMLAFDRLARKTPVVALRAARHAPHWALEFAAAAARHARPSSLQDEVTGKRLRRLAELLEIEDPDARYLDFRTLWSHPADVVFGGAEPPTAMTSKRIPACLGAVDRMMYRDMVDYLPDDILVKMDRASMAVGLEMRAPLLDYRFVELAWRAPRELCFAEAPGKPALRKLLSRRLPEQFINLSKRGFGVPVNAWLRGPLRAWAEEMLSPSRLQRDGIFRAEPIVSRWKAHLAGRVDWGPQLWAVLMFNLWHDRWVRSD
>NZ_CP023071.1|WP_037431955.1|828010_828817_+|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MTPLCELFERIVLEAGASILAVYEAGPTICYKDDRSPVTEADQRAEAIILDRLAAAFPHIPVVAEEAVASGCVPDISCGTFFLVDPLDGTKEFINRRDDFTVNIALIEGNLPVAGIVYAPAQRCAYVADKGRAEKLVFGAGAVVGHRQAIQVRPRGPALTAVASRSHNSSETEAFLAGHGVTDYTSVGSSLKFCLLAEGKADVYPRFGRTMEWDTAAGDAVLNAAGGSVVRLDGSRLLYGKMKQPDDSDFANPHFVAWADMSPVLAAL
>NZ_CP023071.1|WP_037431956.1|826112_828014_+|sulfate-adenylyltransferase-subunit-CysN
MSYLQSVPPHDLGAHLAEHDSKTVLRFITCGSVDDGKSTLIGRLLFDAKLIFEDQLTNLGRVGSPGTANGEEIDLALLLDGLEAEREQGITIDVAYRYFATSKRKFIVADTPGHEEYTRNMVTGASTADLAVILIDSRQGILPQTRRHSYIASLLGIRHLVLAVNKFDLVEFRQSVFDEIARDYRAFAKKLGFVSIQSIPISARFGDNVISASQNTPWYKGPALLEYLETVQLDPPAAERPFRLPVQLVMRPHADFRGYAGQIASGRISVGDPVVVAKSGQHSSVEAIVTFDGNLPTAAEGEAVTLVLADEVDASRGNMLVAPAARPFVADQFQAHVIWFDASPMLPGRGYILRTETDSVSATVTALKHQVNINSFAREAAKSLQMNEVGVCNISTQAPIVFDAYKDNRATGNFVFVDRATNATVGAGMIDFPLRRADNVHWQATDVNKAARSAMKSQRPAVLWFTGLSGSGKSTIANALDRLLHARGKHTYMLDGDNVRHGLNRDLGFTEADRVENIRRVAEVAKLMADAGLIVLVSFISPFRGERQMARELMEECEFIEIFVDTPLEECARRDPKGLYEKALAGKIANFTGVSSPYEAPENPELHLKTVEEDPTTLALKIEAFLDGQRGDR
>NZ_CP023071.1|WP_037431957.1|825213_826113_+|sulfate-adenylyltransferase-subunit-CysD
MSLANLRRLEAEAIHVLREVVATFSNPVVLYSIGKDSSVLLHLALKAFYPAKPPFPFLHVDTTWKFREMITFRDRMTQELGFNLLVHINQDGVDQGVGPFTHGSNLHTHVMKTMALRQALEKYRFDAALAGARRDEEKSRAKERVFSIRNAQHGWDPQRQRPEMWKTYNTRVGAGETMRVFPLSNWTEFDIWQYILQENIAIVPLYFAARRPVVSRDGMLIMIDDDRMPLEPGEEVMDRMVRFRTLGCYPLTGAIDSEAATVPDILREMLTVRTSERQSRLIDTDEAGAMEKKKREGYF
>NZ_CP023071.1|WP_037431959.1|823801_825031_+|ROK-family-transcriptional-regulator
MNEMRPIRAKSGTNQEGASAHNRRVMIDALRVNGQLSRADLARATALTKQAVSNIIEDLERDGLVASLAAVRKGRGQPSTPYRLVPEGAFAIGLQIDRHMTRTIAVDLVGAVLARGEANLPAGGPERGTETILWLIDKTRRELAEVAPQSKDRLVGLGVAMPGPFGIDTDPADPWMMALWQRFPLSETLAIGTGLDVRLQNDSAAAATAEKLVGAAHGLDQAICIYVGYGIGAGLILDGELYRGANGNAGEIGMILSRPENGTEDQRAPLEHRASIASLCKILDRDPADPELYRHLDDFAAASDARIAAWITEAAYELRRAVQILETIFDPQTIVLCGGMPPGLARLLIDAIHPLLPSIAERRTRSAPRLQLGFTDPWAVAIGAAAEPISRTFDPSFSAILKTRSVGSG
>NZ_CP023071.1|WP_037435525.1|822355_823594_-|extracellular-solute-binding-protein
MLKSTRNALLGATLLGLTFAGQAYAETTLNALFMAQAAYSEADVRAMTEAFTKANPDVKVNLEFVPYEGLHDKTVLAQGSGGGYDVVLFDVIWPAEYASNKVLVDVTDRVTDEMNKGILPGAWTTVEYDGKRYGMPWILDTKYLFYNKEILEKAGIKAPPKTWDELAEQAKAIKDKGLLQTPIAWSWSQAEAAICDYTTLVSAYGGKFLDGGKPAFMTGGGLDALNYMVTSYTSGLTNPNSKEFLEEDVRKVFQNGEAAFALNWTYMYNLANDPKESKVAGKVGVVPAPGVTGKSEVSAVNGSMGLGITATSKHPEEAWKYIVHMTSQETQNAYAKLSLPIWASSYEDASVTKGQEELIAAAKLGLAAMYPRPTTPKYQELSTALQQAIQEALLGQASPEDALKTAAENSGL
>NZ_CP023071.1|WP_037431964.1|821376_822258_-|sugar-ABC-transporter-permease
MSANWISTRAWLLMLPLLVVMVSVIGWPLVDTVRLSFTDAKLVGTAGSFVGIDNYAKMLTGSNFQRALVTTTWFAVVSVTAEMVLGVFAALLLNQQFRGRAALRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLGLIDSYRSWLGEPGSALTALIIADCWKNFPLVALIALAALQAVPRDITAAALVDGAGPFNRFRFVVMPYLAGPLLVALVLRTIEAFKVFDIIWVMTRGGPANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALLRRAAGAS
>NZ_CP023071.1|WP_037431948.1|835149_836232_-|glycosyltransferase
MIMHVITNFTASAGAETMLARLLHGSADEHIVVVSLIGISDRNRNLADNPRVAYVSLAASSFAALPGAILRLARLIRKEHPDVILCWMYHAMIVGTIAAQLARSGAAVYWNIRQSLDDPASLTRNSRLAIAGARLLSRRPAGIIYNSARALELHRSYGYANRNMVVIPNGFELPRIDPTEATTARRIGIVGRFHPQKDHGTFFKAVAAVRKTHPQALFSAAGNGLSRDNRAVIDLMAEAGLPEHAIDLRGEISDMPSYYRSIDALVLSSRTEGFPNVIAEAMSYAKPIVTTDVGDAAAVTGNAGIAVPPRDPDALAGAIRSILDLSPSEYARYAHQARNRVESEYAITAIAAKYAAFLKR
>NZ_CP023071.1|WP_086021520.1|836304_837501_-|glycosyltransferase-family-4-protein
MQTEDVASLTRRPDAAYPPARRRVIAIVASLAASLTLFRLELLKRLASAGHDVIAFAPEDDPRVEQALAEIGVRFIRIPMARTGLNPLEDIRTFWSLRQHFKRVKPDMIIPYTMKPIIYAGIAARTLGIKERCFLVTGLGHVFSEVGGRSFKALAIRHLCVRLYRMAFRRATVVFVYNDADAEDIRRYHMLPDAVSPTMVHGSGVDLEHFAFAQPTGGGPVFLMVARLLRDKGVVEYIEAARIVRRSFPDARFQLLGHFDSNPTAISREDINDWISEGILDYLGTTDDVRPYLVACNVFVLPSYYREGIPRSILEALATGRPVITTDLPGCRDTVEPGVNGMTVKPLDVMALADAMALFARDPDLSESMGRRSRELAEKKFDVHMINRVLLAGMGLTD
>NZ_CP023071.1|WP_037431946.1|837824_840086_-|polysaccharide-biosynthesis-protein
MQRFYNAAKAVRDSFLMLPRGEAARSSAKVLLAVCGAALDIGFRRLRGAVFSVQNYPALYVADLGSAGIALAMALLLRYGFAELSTRPETASVLLWSGAQYIAICAIIFPLSGLYSRNWKYGSISDLLIILRAVLVTSLLLISLLFFSTRLTDMPRTVVPMQSLLLIAFLAAARLSFRAEEIPLARPVFKNGRHKGAGDDHQVPLLLVGAGDAAELYLRALARDSNATHVPVACLDKDADQLGMSLRGVPIAGRVEDFERVVAELEQINKRPRHVVFTEAPANFGETASDELLRSADRLGIAVSRLSQLTELKLAKGDNPYELRSIELTDLLERPQAALDREAIARLVRGRRVLITGAGGSIGSELTAQVAACEPAEIVLVDNSEYNLYAIDMTLTETFPKVSRWSYLCSVRRNQRVEEIFDRHRPELVFHAAALKHVPMVQMNPREGVLTNVIGTMNVANAAKKYGTLAMVQVSTDKVVNSTSVMGATKRLAELYCQALDLHGLETAKGPRFMTVRFGNVLGSSGSLIPLFKRQLARGGPLTVTDPCMTRFFMTIREAVELTLQASAYGFEKQLGQGEIFVLDMGEPVKIVDIARRMIRLAGFTPDQDIEIKIIGCRPGEKLYEELFDESDKRTTSPVPGVLGAVPEPIPLPTLRNAFARLQRDAERGNDSAVISVMRELLPRYEHDADNTEPPAMKKKRGLLQPKSRSKTGAPRRQIYQKSARSGLRNLPKERPRRDSVAGLIEKWEARFA
>NZ_CP023071.1|WP_037431944.1|840825_841317_+|hypothetical-protein
MQARSVIEIAESGGRLPTELIMVGYWASQAGVVVFVLNGVAPQAINLVLDPIVATLPLSIPGVLYVSINDKARVCEAVRCADEIYAATRTFRRLTALYGISPRLVRSVVTAIPSLESRTLLSEKDARAPKPAGPHIVMPFPAMNRVRWGATDTTTKHPAKAAV
>NZ_CP023071.1|WP_037431943.1|841553_841901_+|hypothetical-protein
MDISASDRELIAVMRQYFAAKAELESLKEQLEAARQATSAAIGVFYDPRQNAEHAGDLQRSHRLKGEMASLMQRAEAWGRAALTADRRDRSEWEAEPEPEEWQSFERRADTLFGA
>NZ_CP023071.1|WP_037431961.1|842304_842610_-|hypothetical-protein
MAEPDRWRHMASAPKNGSRILVTIRPSEQGAAEVDLAYWSNGDQFGAEGWRASDSSPGRIIEYAEPELKCWMPMPSANLDRTSMPSPWEGDDDQELNGSGI
>NZ_CP023071.1|WP_037431938.1|843127_844777_+|response-regulator
MSDQTVRVLLVEDNPLHAKLIQRLLDTEMQLHCEVVAVDRLADGLGQLERGATDLVLLDLILPDSHELETLFRIRAAAPDVPVVILTGLDDVKLAAHAVEAGASDFLLKTRLNGVALDRAIRYTLARKRAHGGEWDSPMFRLAQQQFLKAAQIMNLDDNIRQRLLFPQRTQVVSFPFFRDDRAQVETVFGYRVQHVLTMGPTKGGIRYHEDVDLGDVAALATLMTWKCALMRLPFGGAKGGVRVDPTVLSKSELQRLTRRYTAEIIDIIGPDKDIPAPDMGTDEQVMAWVMDTYSQQVGHAVPAVVTGKPVVLGGSLGRKEATGRGLVYVIEAAAEAIRLDMAKSNAVVQGFGNVGSFAARFLAEAGVKIIAVSDVSTGLYNANGLSVNALLEYVAKNRVLAGFPDAEPISNAELLELECDVLVLAALQNQVTAENAERIKCRLLAEGANGPTTLEADEILNERGVHIIPDILGNAGGVTVSYFEWVQGLQNLTWTLDEINYRLKAILLDAFARTRRRAEDDQLDLRTAALIEGIARVTQAKLLRGLFP
>NZ_CP023071.1|WP_060563891.1|844814_847784_+|response-regulator
MTKNTDTTHASCSDHTLAEQLEAALAARARAEAARDSLLDGIESALEGFVLYDADDRMVAFNSRFEKLFSPRVAMGMRFEDLIRSAVEQGLAPVGELGVEEWVARRMERHRNPGPPFKLRLNNGTWIRISEGRTRDGGLVGAYTDITELEEQREHLEELVKTTEAATARAEAAQRQLLDAIESSLEGFALYDASDRLVVYNSRYRDFFSGPERAVLPAEPFAVETPGASFELVIRTFAESGLSSLDGQTVDEWIAQRLERHRNPRGPFNLKHQDGTTIRVSERKTSDGGTICVYSDITELEEHRHRLEELVAKRTAKLEQRTEQLRKSREELERARDAAEQASIAKSEFLANMSHEIRTPMNGVIGIAELLEGTELSDQQRRYVSIILHSADTLMDLINDILDFSKIEAGRLELETIPFMLRDTLGDTLQTLAKRAADKGLELACHIPPEVPDHLMGDPTRLRQIIVNLVGNAIKFTENGEVVVDVTLVGQGDQGARLQFDVRDTGIGIPAAQQERIFEAFAQADTSTTRQYGGTGLGLAIAAQLAEKMGGPMQLDSKPGVGSVFTFAADFVLAPEAQKARPVREAELRGRRVLVVDDNATNRQILEEIVVNWGMIPIVAVDGAAALNALEQASGALPDLALLDVMMPRMSGFELAACMRLRPALKETRIVMMSSAGRPSDEALLRKLDVSRLLVKPVKQSDLLNAITNALGFSMREDELEGTASPARLRTGPGLTVLLAEDGAVNRQVAVDLLTKRGHRVEAVGNGQEAVEAAEHGSYDLVLMDVHMPVMDGLAATTAIRALARAECARVPIIALTASATPADRERCLAAGMDGYVTKPFRASELFRVVEQYQPKPASAVAGPATAIPEQPAAAEASALDWDGALSNLDGDAALLRELAAMFLVEYPKLTAAIDAAHAGGDAAELRRAAHTLKGAADVIGAGGVVTAAQRLANLGREGRLEPVPEAQRALAAELDRLRPLLQRAASGA
>NZ_CP023071.1|WP_037431933.1|848001_849912_+|adenylate/guanylate-cyclase-domain-containing-protein
MERKLAAIVAGDIVGYARLMSEDESSTYAALRATFSELIVPTVEKHGGRTFKTTGDGFLATFPSVNEALDAAIEIQNGFVDRPFSMRIGINLGDVIEDNGDMFGDGVNVASRLEAMAAPASIFVSEAVVRSADRTRNKLFYSIGRRQAKNIAEPLAVYAVRLEPDRLGGRAWIRRIALRRRAALPFAVGAAGLIVLAVFTQVPDLRAIGADLTDSFVRLSGGKPADARPTVAVLPFDNMSGETDQAYFADGLTEDIIANLARNPELQVIARNSTFALRGQAEDIRRIGERLGAGYVVEGSARRAGDQLRVVAQLIDARSGAHLWSRTYDRRVEDVFALQTDLTAEIVSHLVSYVRESEVSNAAERPTENLQAYDLVLKARDGYKHGSNDAEALMAARALLHRALELDPGYAAARANLGMTYIVDFAQNLSGRASQTDVETGLSEARQAVRLDPNLAVGYQVLSFGLSVNGDYASAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVRNAERARRLHPMAPEYYTYVYGQALYAAGRLDEADQVLRECLIRAPREADCLLIHTAVLIQREDVQGAQRTMALLTDVDPEFSLADERANRRFGNSRLMEQFLEQLAEARAPDATSGILSPRRPLL
>NZ_CP023071.1|WP_037431932.1|850205_851207_-|DMT-family-transporter
MDKRFSIGVFAALFAAFAFSLNFIVPFIIGDYSTFDFALVRHVVSALVGLCILFSGKGVMQHLTLRNWLSTTWLAFIGYVGYFLTVTGAAIFAGPVIAPAFLGLVPIVLAIIGNQRQGSLPWRFLMMPLMLVLIGLVLVNGSAFTAEGLKSVRSLWIGIPLALAAVALWVWFAIANEAAIATRPEMPSAVWSALTLVGGGVLMLAFYPIGAAMHLFQLPRLGFEWNAAGWLYLWGISLALLATVGGVWAWNVASRTLPVALTAQLIVAETAFGVIGGLIVHGRWPTAMEVTGVAILIAGVVLSIRVFHKSQVRSGKALSRESCISRRGLTAAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	834188-834218	0	1.0
NZ_CP023071_1	1.2\|834242\|31\|NZ_CP023071\|CRISPRCasFinder	834242-834272	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	874901-874931	0	1.0
NZ_CP023071_1	1.2\|834242\|31\|NZ_CP023071\|CRISPRCasFinder	834242-834272	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	834242-834272	0	1.0
NZ_CP023071_1	1.2\|834242\|31\|NZ_CP023071\|CRISPRCasFinder	834242-834272	31	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1237639-1237669	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1158650-1158680	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	874955-874985	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	365330-365360	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1281307-1281337	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	834296-834326	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	481980-482010	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1697894-1697924	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	949245-949275	0	1.0
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1237585-1237615	0	1.0
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1158887-1158917	0	1.0
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	875192-875222	0	1.0
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	834533-834563	0	1.0
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1237348-1237378	0	1.0
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1237294-1237324	0	1.0
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	875246-875276	0	1.0
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	834587-834617	0	1.0
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	1237693-1237723	1	0.968
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	874847-874877	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	943777-943807	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1072161-1072191	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	793644-793674	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	763409-763439	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	835280-835310	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	928192-928222	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	861189-861219	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	524661-524691	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	937645-937675	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	925108-925138	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1595235-1595265	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1188879-1188909	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1559764-1559794	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	850702-850732	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	49004-49034	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	81325-81355	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1088897-1088927	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	935195-935225	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	1053140-1053170	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	708988-709018	1	0.968
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	793648-793678	1	0.968
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1225712-1225742	1	0.968
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1044545-1044575	1	0.968
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1226057-1226087	2	0.935
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1559872-1559902	2	0.935
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1044890-1044920	2	0.935
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1158542-1158572	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	896619-896649	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	749148-749178	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1019367-1019397	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	559967-559997	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	406319-406349	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	408206-408236	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1333334-1333364	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1295518-1295548	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	394493-394523	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1399557-1399587	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1646071-1646101	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	403209-403239	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	389446-389476	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1022543-1022573	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	655053-655083	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	284566-284596	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1178240-1178270	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	610986-611016	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	543363-543393	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1451787-1451817	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1228080-1228110	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1333340-1333370	2	0.935
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	835517-835547	2	0.935
NZ_CP023071_2	2.1\|834533\|31\|NZ_CP023071\|CRISPRCasFinder	834533-834563	31	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1559527-1559557	2	0.935
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1559473-1559503	2	0.935
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	7145-7175	3	0.903
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1158941-1158971	3	0.903
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1155315-1155345	4	0.871
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1023255-1023285	4	0.871
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_009926	Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence	291906-291936	5	0.839
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	770544-770574	5	0.839
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	20057-20087	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	18970-19000	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	703951-703981	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	339182-339212	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	165927-165957	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	1063335-1063365	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	381109-381139	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	20057-20087	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	1398212-1398242	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021821	Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence	164696-164726	6	0.806
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	505619-505649	6	0.806
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP031955	Phaeobacter inhibens strain 2.10 plasmid unnamed3, complete sequence	53455-53485	6	0.806
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_018422	Phaeobacter inhibens 2.10 plasmid pPGA2_71, complete sequence	53219-53249	6	0.806
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP010605	Phaeobacter inhibens strain P83 plasmid pP83_f, complete sequence	18410-18440	6	0.806
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP010711	Phaeobacter inhibens strain P66 plasmid pP66_f, complete sequence	18410-18440	6	0.806
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	122725-122755	6	0.806
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	907655-907685	6	0.806
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	241575-241605	7	0.774
NZ_CP023071_1	1.1\|834188\|31\|NZ_CP023071\|CRISPRCasFinder	834188-834218	31	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	105885-105915	7	0.774
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	590396-590426	7	0.774
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	580821-580851	7	0.774
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	408433-408463	7	0.774
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP010739	Phaeobacter inhibens strain P72 plasmid pP72_d, complete sequence	18321-18351	7	0.774
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1154835-1154865	7	0.774
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	761771-761801	7	0.774
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP025433	Paracoccus zhejiangensis strain J6 plasmid pPZ03, complete sequence	136432-136462	8	0.742
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_015065	Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence	79975-80005	8	0.742
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1232211-1232241	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP020613	Paracoccus contaminans strain RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T plasmid unnamed, complete sequence	3267-3297	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP042824	Rhizobium sp. WL3 plasmid unnamed1, complete sequence	74358-74388	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP048637	Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence	171629-171659	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP039912	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence	203289-203319	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	290256-290286	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	486645-486675	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	MT684587	Microbacterium phage Fede, complete genome	53287-53317	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	311994-312024	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	120127-120157	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	191609-191639	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	MK016504	Mycobacterium phage Whouxphf, complete genome	25291-25321	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	MH230876	Mycobacterium phage ConceptII, complete genome	29892-29922	8	0.742
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NC_022056	Mycobacterium phage Hamulus, complete genome	25198-25228	8	0.742
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	79111-79141	9	0.71
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	401796-401826	9	0.71
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	615103-615133	9	0.71
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	CP000663	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence	127888-127918	9	0.71
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	74055-74085	9	0.71
NZ_CP023071_1	1.3\|834296\|31\|NZ_CP023071\|CRISPRCasFinder	834296-834326	31	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	830976-831006	10	0.677
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP013069	Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence	236561-236591	10	0.677
NZ_CP023071_2	2.2\|834587\|31\|NZ_CP023071\|CRISPRCasFinder	834587-834617	31	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	273467-273497	10	0.677

1. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 0, identity: 1.0

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttgccgttaccgaccgagatcc	Protospacer
*******************************

2. spacer 1.2|834242|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 0, identity: 1.0

gcttcgtcgattccagtttcggaatcgagca	CRISPR spacer
gcttcgtcgattccagtttcggaatcgagca	Protospacer
*******************************

3. spacer 1.2|834242|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 0, identity: 1.0

gcttcgtcgattccagtttcggaatcgagca	CRISPR spacer
gcttcgtcgattccagtttcggaatcgagca	Protospacer
*******************************

4. spacer 1.2|834242|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 0, identity: 1.0

gcttcgtcgattccagtttcggaatcgagca	CRISPR spacer
gcttcgtcgattccagtttcggaatcgagca	Protospacer
*******************************

5. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

6. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

7. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

8. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

9. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

10. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

11. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

12. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

13. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 0, identity: 1.0

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacga	Protospacer
*******************************

14. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 0, identity: 1.0

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atatattcttcgcctgctccaccgtagatct	Protospacer
*******************************

15. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 0, identity: 1.0

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atatattcttcgcctgctccaccgtagatct	Protospacer
*******************************

16. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 0, identity: 1.0

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atatattcttcgcctgctccaccgtagatct	Protospacer
*******************************

17. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 0, identity: 1.0

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atatattcttcgcctgctccaccgtagatct	Protospacer
*******************************

18. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 0, identity: 1.0

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atgtggtcgtggccgtcaccaccgtcgatga	Protospacer
*******************************

19. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 0, identity: 1.0

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atgtggtcgtggccgtcaccaccgtcgatga	Protospacer
*******************************

20. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 0, identity: 1.0

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atgtggtcgtggccgtcaccaccgtcgatga	Protospacer
*******************************

21. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 1, identity: 0.968

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttaccgttaccgaccgagatcc	Protospacer
***********.*******************

22. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 1, identity: 0.968

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttaccgttaccgaccgagatcc	Protospacer
***********.*******************

23. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agaaagttgttcccgtcgccgccatcgacga	Protospacer
*** ***************************

24. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgtcgccgccatcgacga	Protospacer
***********.*******************

25. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

26. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

27. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcaccgccatcgacga	Protospacer
*****************.*************

28. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

29. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

30. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

31. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

32. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

33. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

34. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

35. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgatga	Protospacer
****************************.**

36. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

37. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

38. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

39. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

40. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

41. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccgtcgacga	Protospacer
***********************.*******

42. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

43. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.968

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgttcccgtcgccgccatcgacaa	Protospacer
*****************************.*

44. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 1, identity: 0.968

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atatattcttcgcctgctccaccgtagattt	Protospacer
*****************************.*

45. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 1, identity: 0.968

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atatattcttcgcctgctccaccgtagattt	Protospacer
*****************************.*

46. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 2, identity: 0.935

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttgccgtcgccgaccgagatcc	Protospacer
****************..*************

47. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 2, identity: 0.935

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttgccgtcgccgaccgagatcc	Protospacer
****************..*************

48. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 2, identity: 0.935

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttgccgtcgccgaccgagatcc	Protospacer
****************..*************

49. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 2, identity: 0.935

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
gcgatgtcgttgccgtcaccgaccgcgatcc	Protospacer
****************.******** *****

50. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

51. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

52. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

53. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

54. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

55. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

56. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

57. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

58. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

59. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

60. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

61. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

62. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

63. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

64. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

65. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

66. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

67. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

68. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

69. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

70. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

71. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 2, identity: 0.935

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtttccgttgccgccatcgacga	Protospacer
***********.****.**************

72. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 2, identity: 0.935

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atgtactcttcgcctgctccaccgtagatct	Protospacer
**.**.*************************

73. spacer 2.1|834533|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 2, identity: 0.935

atatattcttcgcctgctccaccgtagatct	CRISPR spacer
atgtattcctcgcctgctccaccgtagatct	Protospacer
**.*****.**********************

74. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 2, identity: 0.935

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atgtgatcgtggccgtccccaccgtcgatga	Protospacer
*****.*********** *************

75. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 3, identity: 0.903

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
aggtagttgttcccgtcgccgccgtcgacaa	Protospacer
**.********************.*****.*

76. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 3, identity: 0.903

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atgtgatcgtggccgtcaccaccatcgatgg	Protospacer
*****.*****************.******.

77. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 4, identity: 0.871

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtcgccgtcgccgccatcgaccc	Protospacer
**********. *****************

78. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 4, identity: 0.871

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagttgtcgccgtcgccgccatcgaccc	Protospacer
**********. *****************

79. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_009926 (Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence) position: , mismatch: 5, identity: 0.839

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atgttgtcgtggccgtcaccaccgtggaccc	Protospacer
**** ******************** **.

80. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 5, identity: 0.839

atgtggtcgtggccgtcaccaccgtcgatga-	CRISPR spacer
gggtgatcgtggccatcaccaccgt-gatgat	Protospacer
. ***.********.********** *****

81. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

82. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

83. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

84. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

85. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

86. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

87. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

88. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

89. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

90. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

91. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.806

agatagttgttcccgtcgccgcc-atcgacga	CRISPR spacer
agattgtcgttcccgtcgccgccgatcagcc-	Protospacer
**** **.*************** ***..*

92. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP031955 (Phaeobacter inhibens strain 2.10 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
aggatgtcgttgccttcaccaccgtcgatgt	Protospacer
* *  ***** *** ***************

93. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_018422 (Phaeobacter inhibens 2.10 plasmid pPGA2_71, complete sequence) position: , mismatch: 6, identity: 0.806

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
aggatgtcgttgccttcaccaccgtcgatgt	Protospacer
* *  ***** *** ***************

94. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP010605 (Phaeobacter inhibens strain P83 plasmid pP83_f, complete sequence) position: , mismatch: 6, identity: 0.806

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
aggatgtcgttgccttcaccaccgtcgatgt	Protospacer
* *  ***** *** ***************

95. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP010711 (Phaeobacter inhibens strain P66 plasmid pP66_f, complete sequence) position: , mismatch: 6, identity: 0.806

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
aggatgtcgttgccttcaccaccgtcgatgt	Protospacer
* *  ***** *** ***************

96. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.806

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
agggcgtcgttgccgtcgccaccgtcgatca	Protospacer
* *  ***** ******.*********** *

97. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.806

atgtg-gtcgtggccgtcaccaccgtcgatga	CRISPR spacer
-tgcgcttcgtggccgtcaagaccgtcgatca	Protospacer
 **.*  ************  ********* *

98. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 7, identity: 0.774

gcgatgtcgttgccgttaccgaccgagatcc	CRISPR spacer
ccgatgtccttgccgttaccgaccttgtcac	Protospacer
 ******* ***************  * . *

99. spacer 1.1|834188|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 7, identity: 0.774

gcgatgtcgttgccgttaccga-----ccgagatcc	CRISPR spacer
gccatgtcgttgccgttgccgacctgcccga-----	Protospacer
** **************.****     ****

100. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 7, identity: 0.774

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agatagtcgttgccgtcgccgccttgcaggc	Protospacer
*******.*** *********** *  * *

101. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.774

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
agggtatcgttgccgtcgccgccatcgatga	Protospacer
**.  .*.*** ****************.**

102. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.774

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tcatcgtcgtggccgtcaccatcctcgatgc	Protospacer
 ..* ****************.* ******

103. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP010739 (Phaeobacter inhibens strain P72 plasmid pP72_d, complete sequence) position: , mismatch: 7, identity: 0.774

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
agaacgtcgttgccgtcaccaccatcgatgg	Protospacer
* .  ***** ************.******.

104. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.774

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atccggtcgttgccgtcgccaccgtcgagat	Protospacer
** .****** ******.********** .

105. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.774

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
aggacgtcgttgccgtcaccgccgtcgatcg	Protospacer
* *  ***** *********.******** .

106. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP025433 (Paracoccus zhejiangensis strain J6 plasmid pPZ03, complete sequence) position: , mismatch: 8, identity: 0.742

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
atgacgttgttgccgtcgctgccatcgacat	Protospacer
* .  ****** *******.*********.

107. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_015065 (Granulicella tundricola MP5ACTX9 plasmid pACIX902, complete sequence) position: , mismatch: 8, identity: 0.742

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
acgccattggtcccgtcgccgccatagacgc	Protospacer
* .. .*** *************** ****

108. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 8, identity: 0.742

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
ccaagctggttcccgccgccgccatcgccga	Protospacer
  * . * *******.*********** ***

109. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP020613 (Paracoccus contaminans strain RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
gcctgatcgtggccgtcaccaccgtcgcgtt	Protospacer
.. **.*********************

110. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP042824 (Rhizobium sp. WL3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tcggcgtcgtggccgtcaccaccttcgagac	Protospacer
 .*  ****************** **** .

111. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP048637 (Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tcggcgtcgtggccgtcaccaccttcgagac	Protospacer
 .*  ****************** **** .

112. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP039912 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625a, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tcggcgtcgtggccgtcaccaccttcgagac	Protospacer
 .*  ****************** **** .

113. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
gtccggtcgtggccgtgaccaccttcgagac	Protospacer
.* .************ ****** **** .

114. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atcgtatcgttgccgtcaccaccgtcgacag	Protospacer
**   .**** *****************...

115. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to MT684587 (Microbacterium phage Fede, complete genome) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
gcacgtccgtggccctcaccacagtcgatga	Protospacer
....* .******* ******* ********

116. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
accgtatcgttgccgtcgccaccgtcgatgg	Protospacer
*.   .**** ******.************.

117. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
cggcggtcgtcgccgtcaccaccctcgaccg	Protospacer
  *.****** ************ ****. .

118. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
ccgtggtcgaggccgtcaccaccgcctcgaa	Protospacer
 .******* **************.*   .*

119. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to MK016504 (Mycobacterium phage Whouxphf, complete genome) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atcaggacgtagccgtcaccaccgtcgccac	Protospacer
**  ** ***.**************** ..

120. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to MH230876 (Mycobacterium phage ConceptII, complete genome) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atcaggacgtagccgtcaccaccgtcgccac	Protospacer
**  ** ***.**************** ..

121. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NC_022056 (Mycobacterium phage Hamulus, complete genome) position: , mismatch: 8, identity: 0.742

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
atcaggacgtagccgtcaccaccgtcgccac	Protospacer
**  ** ***.**************** ..

122. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 9, identity: 0.71

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
tttcgactgttccggtcgccgccaacgacga	Protospacer
   ....****** ********** ******

123. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 9, identity: 0.71

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
tttcgactgttccggtcgccgccaacgacga	Protospacer
   ....****** ********** ******

124. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.71

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
agaacatcgttgccgtcgccaccgtcgatcc	Protospacer
* .  .**** ******.***********

125. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 9, identity: 0.71

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tcggcgtcgtggccgtcaccgccgacgaccg	Protospacer
 .*  ***************.*** ***. .

126. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 9, identity: 0.71

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tcggcgtcgtggccgtcaccgccgacgaccg	Protospacer
 .*  ***************.*** ***. .

127. spacer 1.3|834296|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 10, identity: 0.677

agatagttgttcccgtcgccgccatcgacga	CRISPR spacer
caggccctgttcccggcgccgccaccgacgc	Protospacer
 ..   .******** ********.*****

128. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 10, identity: 0.677

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
gaccggtcgtggccctcaccaccgccgcctc	Protospacer
.  .********** *********.** .

129. spacer 2.2|834587|31|NZ_CP023071|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.677

atgtggtcgtggccgtcaccaccgtcgatga	CRISPR spacer
tctccaccgtggcggtcaccaccggcgatgc	Protospacer
 . . ..****** ********** *****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1108923 : 1148270

Leptospira_phage(33.33%)

integrase,transposase

attL 1144985:1145012|attR 1148359:1148386

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100209483.1\|1108923_1109325_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_037430533.1\|1109798_1110329_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A218MN57	uncultured_virus	5.7e-21	38.0
WP_037430535.1\|1110648_1111944_+	methyltransferase domain-containing protein	A0A1V0SJ83	Klosneuvirus	1.2e-35	27.8
WP_037430538.1\|1111940_1112756_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_037430540.1\|1112752_1113406_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_037430544.1\|1113975_1115358_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_153452093.1\|1117267_1117411_+	hypothetical protein	NA	NA	NA	NA
WP_037436772.1\|1121083_1122115_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_037436774.1\|1122142_1123129_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_037436778.1\|1123161_1124622_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_080579331.1\|1125003_1126347_+	glycoside hydrolase family 140 protein	NA	NA	NA	NA
WP_037437555.1\|1126343_1127645_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_037436806.1\|1131681_1132833_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	A0A2K9L0G1	Tupanvirus	9.5e-29	25.6
WP_037436804.1\|1132829_1133522_+	pseudaminic acid cytidylyltransferase	A0A1B1IVD3	uncultured_Mediterranean_phage	1.8e-06	49.1
WP_037436801.1\|1133606_1134617_+	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	A0A2K9L2R7	Tupanvirus	4.5e-14	27.8
WP_037436800.1\|1134668_1135922_+	hypothetical protein	NA	NA	NA	NA
WP_037436798.1\|1136184_1138668_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_095689785.1\|1139273_1139609_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.4e-09	37.3
WP_095678167.1\|1139542_1140630_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.8e-44	44.7
WP_157750332.1\|1140893_1142468_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.4e-46	29.2
WP_037435909.1\|1142358_1144434_-	recombinase family protein	NA	NA	NA	NA
WP_162130061.1\|1144430_1144868_-	hypothetical protein	NA	NA	NA	NA
1144985:1145012	attL	NA	NA	NA	NA
WP_037427235.1\|1145110_1146352_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_095689786.1\|1146348_1147272_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_095689787.1\|1147268_1148270_+\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	3.0e-18	25.9
1148359:1148386	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2064934 : 2146482

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086021549.1\|2064934_2066034_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.0e-48	41.0
WP_037395736.1\|2066246_2068022_-	guanylate cyclase	NA	NA	NA	NA
WP_080579269.1\|2068411_2068645_-	DUF4440 domain-containing protein	NA	NA	NA	NA
WP_037435781.1\|2068602_2068872_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_037435783.1\|2069764_2070382_+	cupin domain-containing protein	NA	NA	NA	NA
WP_037435785.1\|2070579_2072010_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_037435787.1\|2072006_2072831_-	ABC transporter permease	NA	NA	NA	NA
WP_037435789.1\|2072827_2073766_-	ABC transporter permease	NA	NA	NA	NA
WP_037435791.1\|2073779_2075300_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037402184.1\|2076429_2077098_-	hydrolase	NA	NA	NA	NA
WP_037435793.1\|2078871_2079465_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_141322281.1\|2080076_2080517_+	M10 family metallopeptidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_037402201.1\|2081467_2082151_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_037402203.1\|2082137_2082929_-	4-hydroxy-2-oxoheptanedioate aldolase	NA	NA	NA	NA
WP_018237596.1\|2082937_2083720_-	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA
WP_037402206.1\|2083744_2084638_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA
WP_014766263.1\|2084896_2085634_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_037435796.1\|2085633_2086455_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_037402211.1\|2086501_2087170_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_037435798.1\|2087179_2087830_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_037435800.1\|2087871_2088696_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_050994764.1\|2088703_2089477_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-31	38.6
WP_037402220.1\|2089495_2090356_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_015886723.1\|2090370_2090739_+	5-carboxymethyl-2-hydroxymuconate Delta-isomerase	NA	NA	NA	NA
WP_037435802.1\|2090772_2091222_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_037435803.1\|2091229_2092267_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_037437159.1\|2092967_2094524_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_037437162.1\|2095323_2095965_+	AhpC/TSA family protein	NA	NA	NA	NA
WP_037437197.1\|2096266_2097700_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_037437184.1\|2097913_2098312_-	RidA family protein	NA	NA	NA	NA
WP_037437187.1\|2098467_2099061_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_095689804.1\|2099387_2100776_-\|transposase	transposase	NA	NA	NA	NA
WP_162267718.1\|2101078_2101516_-	hypothetical protein	NA	NA	NA	NA
WP_037435622.1\|2101551_2101833_-	hypothetical protein	NA	NA	NA	NA
WP_037435621.1\|2101874_2102624_-	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_037435616.1\|2104412_2105498_-	hypothetical protein	NA	NA	NA	NA
WP_050994757.1\|2106719_2107952_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_050994756.1\|2108015_2108798_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-31	37.7
WP_037400656.1\|2108807_2109947_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_086021536.1\|2109948_2111076_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_037435614.1\|2112030_2112507_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_037400335.1\|2114934_2117214_-	glycosyltransferase	NA	NA	NA	NA
WP_037435608.1\|2117210_2120453_-	glycosyltransferase	NA	NA	NA	NA
WP_162129736.1\|2120449_2122684_-	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	1.8e-71	38.7
WP_037435606.1\|2122876_2124034_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_037402433.1\|2129484_2129991_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_014328473.1\|2130307_2131228_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	7.1e-35	35.3
WP_161623564.1\|2131224_2132709_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_037402435.1\|2133965_2134895_+	NAD(P)/FAD-dependent oxidoreductase	A0A2I2L5E1	Orpheovirus	1.4e-14	27.9
WP_141322333.1\|2136225_2136621_-	hypothetical protein	NA	NA	NA	NA
WP_037402439.1\|2136890_2137805_-	hypothetical protein	NA	NA	NA	NA
WP_050984208.1\|2138322_2142714_+	PAS domain S-box protein	NA	NA	NA	NA
WP_037402441.1\|2142670_2143042_+	response regulator	NA	NA	NA	NA
WP_037402443.1\|2143570_2144206_-	DUF1326 domain-containing protein	NA	NA	NA	NA
WP_037436548.1\|2144592_2144838_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_037437167.1\|2145166_2145766_-	hypothetical protein	NA	NA	NA	NA
WP_037437165.1\|2146026_2146482_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP023073

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

40019 : 47493

Sinorhizobium_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080579151.1\|40019_40997_-	ATP-dependent DNA ligase	A0A076GD42	Sinorhizobium_phage	2.1e-154	81.8
WP_037433882.1\|41055_41319_+	hypothetical protein	A0A291AUP6	Sinorhizobium_phage	2.3e-31	72.4
WP_050994676.1\|41935_42343_+	hypothetical protein	NA	NA	NA	NA
WP_037433878.1\|42476_43391_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_037433877.1\|43439_43982_-	dihydrofolate reductase	A0A1B2IBQ4	Erwinia_phage	1.0e-17	37.6
WP_050994675.1\|44186_44696_+	hypothetical protein	NA	NA	NA	NA
WP_080579150.1\|44692_45691_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_037433872.1\|45687_46299_-	recombinase family protein	E5FFF9	Burkholderia_phage	3.2e-15	34.5
WP_080579149.1\|46394_46571_+	DUF4158 domain-containing protein	NA	NA	NA	NA
WP_050994674.1\|46567_46825_+	hypothetical protein	A0A291AUP3	Sinorhizobium_phage	5.2e-36	78.8
WP_037433870.1\|46833_47493_+	SOS response-associated peptidase	A0A291AUP1	Sinorhizobium_phage	4.5e-116	86.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023070

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023072

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP023071

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP023073

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection