CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP023066	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence	0 crisprs	WYL	0	0
NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	0 crisprs	RT	0	7
NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	0 crisprs	DEDDh,csa3	0	0
NZ_CP023063	Sinorhizobium sp. CCBAU 05631 chromosome, complete genome	2 crisprs	csa3,WYL,cas3,DEDDh	1	3

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15979 : 57547

Leptospira_phage(16.67%)

integrase,transposase

attL 25273:25287|attR 59952:59966

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086022819.1\|15979_17169_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-51	43.3
WP_037427698.1\|17386_18586_-\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-94	48.2
WP_037427600.1\|19269_20610_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_172900204.1\|20698_21208_-	hypothetical protein	NA	NA	NA	NA
WP_095678107.1\|21976_22978_-\|integrase	tyrosine-type recombinase/integrase	S5M9V8	Brevibacillus_phage	2.7e-11	22.9
WP_037427386.1\|24264_25314_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
25273:25287	attL	NA	NA	NA	NA
WP_014857758.1\|25399_26302_-	hypothetical protein	NA	NA	NA	NA
WP_037427384.1\|26298_27849_-	hypothetical protein	NA	NA	NA	NA
WP_083854369.1\|27984_30105_-	cytochrome P450	NA	NA	NA	NA
WP_034859623.1\|30316_30625_-	ferredoxin	NA	NA	NA	NA
WP_014857763.1\|30626_31934_-	cytochrome P450	NA	NA	NA	NA
WP_037427385.1\|32452_33793_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_015633479.1\|34308_34542_-	hypothetical protein	NA	NA	NA	NA
WP_095678108.1\|35037_35973_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	1.0e-25	32.5
WP_162109209.1\|36068_37011_-\|transposase	IS630 family transposase	A0A2H4UVU9	Bodo_saltans_virus	2.4e-09	23.2
WP_037427331.1\|40597_41389_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-11	23.0
WP_066005175.1\|42276_43362_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_037427333.1\|44694_46053_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037427335.1\|46110_46893_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.4e-12	25.2
WP_037427337.1\|46927_48154_+	monooxygenase	NA	NA	NA	NA
WP_095678166.1\|48685_48889_-	GFA family protein	NA	NA	NA	NA
WP_157213237.1\|49493_49931_+	hypothetical protein	NA	NA	NA	NA
WP_066005173.1\|50024_51050_-	porin	NA	NA	NA	NA
WP_157213238.1\|51393_51561_+	hypothetical protein	NA	NA	NA	NA
WP_037427348.1\|51701_51908_-\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	5.9e-06	43.3
WP_037427675.1\|52028_52790_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.1e-71	55.6
WP_037437027.1\|52805_54347_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	3.9e-126	43.9
WP_172900202.1\|54500_54710_-\|transposase	transposase	NA	NA	NA	NA
WP_037427862.1\|54706_55081_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.0e-24	47.3
WP_095678109.1\|55492_56668_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_037437931.1\|56677_57547_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.2e-33	34.3
59952:59966	attR	NA	NA	NA	NA

DBSCAN-SWA_2

123358 : 142150

Leptospira_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095678167.1\|123358_124446_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.8e-44	44.7
WP_037427530.1\|124689_125463_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_078070510.1\|125724_126411_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_037427532.1\|126517_127627_-	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	4.8e-46	33.7
WP_050988451.1\|127631_128153_-	sugar isomerase	NA	NA	NA	NA
WP_050988452.1\|128130_129264_-	tagatose-6-phosphate kinase	NA	NA	NA	NA
WP_162109203.1\|129187_129562_+	hypothetical protein	NA	NA	NA	NA
WP_037427534.1\|130652_130997_+	hypothetical protein	NA	NA	NA	NA
WP_109023434.1\|131195_131912_+\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_095677963.1\|132231_133266_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_095678114.1\|133451_134966_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_014330979.1\|136543_138289_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_109023434.1\|138573_139290_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_034859666.1\|140404_141262_-	hypothetical protein	NA	NA	NA	NA
WP_109023434.1\|141433_142150_+\|transposase	IS6 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

154977 : 205043

Sinorhizobium_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037427413.1\|154977_156273_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_080579355.1\|157602_159426_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.6e-33	31.6
WP_037427633.1\|161182_161536_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.2e-19	47.3
WP_080579353.1\|161516_161966_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	5.2e-07	40.4
WP_034859708.1\|165549_166035_-	hypothetical protein	NA	NA	NA	NA
WP_014858081.1\|166253_166634_-	hypothetical protein	NA	NA	NA	NA
WP_080579349.1\|166842_167028_-	hypothetical protein	NA	NA	NA	NA
WP_095678116.1\|168536_169574_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_014857619.1\|170187_170445_-	hypothetical protein	A0A2I7REY7	Vibrio_phage	4.9e-10	49.2
WP_037427469.1\|171164_172724_-	E2 ligase fold family C protein	NA	NA	NA	NA
WP_037427470.1\|172726_173215_-	Mov34/MPN/PAD-1 family protein	NA	NA	NA	NA
WP_037427479.1\|173211_173817_-	hypothetical protein	NA	NA	NA	NA
WP_037427472.1\|173809_174106_-	DUF2604 domain-containing protein	NA	NA	NA	NA
WP_010875326.1\|174423_174681_+	plasmid stability protein stbC	NA	NA	NA	NA
WP_037427474.1\|174677_175100_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_095678168.1\|175403_176141_+	hypothetical protein	NA	NA	NA	NA
WP_037427476.1\|176649_178002_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	7.0e-55	47.4
WP_086021547.1\|179091_179355_+	Y4bD/Y4pK family protein	NA	NA	NA	NA
WP_172900205.1\|183063_184776_+	recombinase family protein	NA	NA	NA	NA
WP_014331725.1\|185949_186687_+	hypothetical protein	NA	NA	NA	NA
WP_014331726.1\|186673_188083_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_037427172.1\|188242_188728_-	adenosine-specific kinase	NA	NA	NA	NA
WP_037427170.1\|189261_189627_+	hypothetical protein	A0A0F7L9F6	uncultured_marine_virus	7.7e-17	40.5
WP_037427168.1\|190426_190657_-	hypothetical protein	A0A291AUQ4	Sinorhizobium_phage	2.2e-17	60.3
WP_037427166.1\|190893_191082_+	hypothetical protein	NA	NA	NA	NA
WP_162109199.1\|191619_192000_+	hypothetical protein	NA	NA	NA	NA
WP_172900206.1\|192165_193092_+	ATP-dependent DNA ligase	A0A291AUP8	Sinorhizobium_phage	3.7e-132	74.4
WP_162109197.1\|193488_193770_-	hypothetical protein	NA	NA	NA	NA
WP_037427154.1\|193784_196241_-	EAL domain-containing protein	G3MA91	Bacillus_virus	1.2e-23	32.6
WP_037427152.1\|196635_197238_+	hypothetical protein	NA	NA	NA	NA
WP_037427150.1\|197568_198024_+\|transposase	transposase	NA	NA	NA	NA
WP_037427149.1\|198282_198891_+	hypothetical protein	NA	NA	NA	NA
WP_037427148.1\|199504_199978_+	ProQ/FinO family protein	NA	NA	NA	NA
WP_037427147.1\|200282_200573_-	hypothetical protein	NA	NA	NA	NA
WP_037427144.1\|200886_201081_-	hypothetical protein	NA	NA	NA	NA
WP_037427142.1\|201452_201704_-	WGR domain-containing protein	NA	NA	NA	NA
WP_037427157.1\|202011_202497_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_037427140.1\|202736_203129_-	hypothetical protein	NA	NA	NA	NA
WP_083854351.1\|203132_203342_-	hypothetical protein	NA	NA	NA	NA
WP_037427698.1\|203843_205043_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-94	48.2

DBSCAN-SWA_4

265680 : 336668

Leptospira_phage(15.0%)

integrase,holin,transposase

attL 300784:300843|attR 308273:308298

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037425359.1\|265680_266619_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037425362.1\|266618_267437_+	alpha/beta hydrolase	A0A0B5A484	Mycobacterium_phage	5.4e-10	41.2
WP_037425368.1\|268940_270734_+	PAS domain-containing methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.3e-10	31.6
WP_037425374.1\|272185_274285_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_037425377.1\|274281_275310_-	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_037425380.1\|275290_276502_-	type IV secretion system protein VirB10	NA	NA	NA	NA
WP_037425383.1\|276501_277311_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_037425386.1\|277307_278003_-	type IV secretion system protein	NA	NA	NA	NA
WP_037425388.1\|278040_279069_-	type IV secretion system protein	NA	NA	NA	NA
WP_037425391.1\|279084_279312_-	hypothetical protein	NA	NA	NA	NA
WP_037425394.1\|279301_280003_-	conjugal transfer protein	NA	NA	NA	NA
WP_037425396.1\|280014_281103_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	2.5e-31	46.4
WP_037425398.1\|281099_283559_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_080582725.1\|283561_283861_-	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_011971086.1\|283864_284203_-	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_037425404.1\|284214_285126_-	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	6.4e-20	45.9
WP_037425405.1\|285348_285957_+	hypothetical protein	NA	NA	NA	NA
WP_037425406.1\|285953_286490_+	succinoglycan biosynthesis protein exoi	NA	NA	NA	NA
WP_037425407.1\|286486_287188_+	thermonuclease family protein	NA	NA	NA	NA
WP_037425416.1\|287188_287584_+	hypothetical protein	NA	NA	NA	NA
WP_095678122.1\|287585_288179_+	hypothetical protein	NA	NA	NA	NA
WP_050988368.1\|288678_288963_-	hypothetical protein	NA	NA	NA	NA
WP_037425441.1\|289460_290486_-	dienelactone hydrolase-related enzyme	NA	NA	NA	NA
WP_037425444.1\|290475_292086_-	hypothetical protein	NA	NA	NA	NA
WP_037425447.1\|292349_292652_+	hypothetical protein	NA	NA	NA	NA
WP_095678123.1\|292984_294355_-\|transposase	ISNCY family transposase	Q8UM96	Porcine_endogenous_retrovirus	3.0e-05	28.8
WP_172900207.1\|294635_294803_+	hypothetical protein	NA	NA	NA	NA
WP_037427675.1\|294951_295713_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.1e-71	55.6
WP_037437027.1\|295728_297270_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	3.9e-126	43.9
WP_014330939.1\|297472_297865_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_014330938.1\|297861_298209_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.4e-38	64.5
WP_095678125.1\|299901_300783_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	4.6e-31	32.6
300784:300843	attL	NA	NA	NA	NA
WP_037427670.1\|300790_301987_+\|transposase	IS91 family transposase	NA	NA	NA	NA
300784:300843	attL	NA	NA	NA	NA
WP_095678125.1\|302461_303343_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	4.6e-31	32.6
WP_037427670.1\|303350_304547_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_095678126.1\|305014_306016_-\|integrase	tyrosine-type recombinase/integrase	A0A160DCT0	Gordonia_phage	1.9e-12	28.7
303344:304902	attR	NA	NA	NA	NA
WP_095678127.1\|306012_306936_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
303344:304902	attR	NA	NA	NA	NA
WP_037427235.1\|306932_308174_-\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	3.0e-12	29.0
WP_100209413.1\|308435_309050_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_014330935.1\|309079_309370_+	hypothetical protein	NA	NA	NA	NA
WP_010875074.1\|310397_310829_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.9e-22	47.1
WP_014857607.1\|311352_311970_-	hypothetical protein	NA	NA	NA	NA
WP_014857606.1\|312100_312547_-\|transposase	transposase	NA	NA	NA	NA
WP_015633385.1\|312692_313124_-	helix-turn-helix transcriptional regulator	A0A223W054	Agrobacterium_phage	2.9e-23	46.3
WP_014857603.1\|313723_314689_-	transcriptional regulator NodD1	NA	NA	NA	NA
WP_050988434.1\|315417_316872_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.3e-50	27.8
WP_034859288.1\|317018_318434_+	phosphomannomutase	NA	NA	NA	NA
WP_037427231.1\|318748_319717_+	nodulation protein NodZ	NA	NA	NA	NA
WP_014857595.1\|319961_321017_+	GDP-mannose 4,6-dehydratase	M1HKK4	Acanthocystis_turfacea_Chlorella_virus	4.5e-126	64.3
WP_034859283.1\|321031_321970_+	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	3.5e-90	50.6
WP_078070781.1\|321862_322249_-	potassium-transporting ATPase subunit C	NA	NA	NA	NA
WP_095678167.1\|322536_323624_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	5.8e-44	44.7
WP_066001778.1\|324354_324879_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_037427452.1\|324875_325754_+	squalene synthase HpnC	NA	NA	NA	NA
WP_037427455.1\|325750_326587_+	presqualene diphosphate synthase HpnD	NA	NA	NA	NA
WP_014857589.1\|326586_327894_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_050988448.1\|327937_329830_+	squalene--hopene cyclase	NA	NA	NA	NA
WP_078070602.1\|330274_330523_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_037427458.1\|330831_331851_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_086022824.1\|332817_333572_-\|transposase	IS5 family transposase	A0A0N9SJT9	Paenibacillus_phage	1.3e-10	37.0
WP_095678047.1\|333727_334561_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_015633379.1\|335798_336668_-\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	2.8e-25	29.3

DBSCAN-SWA_5

390548 : 445744

Leptospira_phage(20.0%)

integrase,transposase

attL 390165:390181|attR 461830:461846

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
390165:390181	attL	NA	NA	NA	NA
WP_095677963.1\|390548_391583_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_050988433.1\|392101_392593_-	hypothetical protein	NA	NA	NA	NA
WP_037427206.1\|392684_393713_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_037427208.1\|394009_395209_-	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_037427210.1\|395638_396772_-	MFS transporter	NA	NA	NA	NA
WP_010875143.1\|397508_397940_-	helix-turn-helix transcriptional regulator	A0A223W054	Agrobacterium_phage	3.7e-26	47.1
WP_037427212.1\|398449_399793_-	insulinase family protein	G3MBJ8	Bacillus_virus	1.6e-14	22.4
WP_010875145.1\|399789_401328_-	insulinase family protein	L7RBE7	Acanthamoeba_polyphaga_moumouvirus	3.6e-23	28.8
WP_037427214.1\|402137_402635_+	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_037427216.1\|402987_403305_-	ferredoxin III, nif-specific	NA	NA	NA	NA
WP_037427218.1\|403601_404033_-	hypothetical protein	NA	NA	NA	NA
WP_037427220.1\|404466_404955_-	NifX-associated nitrogen fixation protein	NA	NA	NA	NA
WP_037427222.1\|404958_405441_-	nitrogen fixation protein NifX	NA	NA	NA	NA
WP_037427224.1\|405437_406847_-	nitrogenase iron-molybdenum cofactor biosynthesis protein NifN	NA	NA	NA	NA
WP_037427226.1\|406856_408347_-	nitrogenase iron-molybdenum cofactor biosynthesis protein NifE	NA	NA	NA	NA
WP_095678131.1\|408402_409944_-	nitrogenase molybdenum-iron protein subunit beta	NA	NA	NA	NA
WP_095678132.1\|410039_411554_-	nitrogenase molybdenum-iron protein alpha chain	NA	NA	NA	NA
WP_095678133.1\|411648_412539_-	nitrogenase iron protein	NA	NA	NA	NA
WP_037427039.1\|413144_414200_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_037427033.1\|414337_415984_-	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	1.0e-15	35.5
WP_034859521.1\|416046_416619_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_162109193.1\|416697_417918_-	cytochrome P450	NA	NA	NA	NA
WP_083854346.1\|417938_419453_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_083854345.1\|419483_420203_-	nitrogen fixation protein NifQ	NA	NA	NA	NA
WP_037427023.1\|420774_421341_+	peroxiredoxin	M1TUY3	Synechococcus_phage	1.0e-47	53.4
WP_037427021.1\|422013_422334_+	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	3.8e-12	37.6
WP_034859514.1\|422783_423641_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_037427017.1\|423650_424760_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_037427014.1\|424770_426078_+	FAD-binding protein	NA	NA	NA	NA
WP_083854344.1\|426092_426386_+	ferredoxin family protein	NA	NA	NA	NA
WP_083854343.1\|426438_428220_+	nif-specific transcriptional activator NifA	NA	NA	NA	NA
WP_037427012.1\|428435_429917_+	nitrogenase cofactor biosynthesis protein NifB	NA	NA	NA	NA
WP_083854342.1\|429955_430150_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_037427035.1\|430225_430552_+	nitrogen fixation protein NifZ	NA	NA	NA	NA
WP_037427011.1\|430548_430779_+	putative nitrogen fixation protein NifT	NA	NA	NA	NA
WP_157213225.1\|431078_431255_+	hypothetical protein	NA	NA	NA	NA
WP_037427008.1\|431835_433023_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_095678135.1\|435635_436505_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.3e-33	34.3
WP_083854383.1\|436694_437009_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_086022825.1\|437106_438053_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	1.6e-10	23.8
WP_037427585.1\|439372_439654_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_037427807.1\|441551_441926_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	2.4e-05	45.9
WP_083854390.1\|441922_442171_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.6e-05	49.0
WP_172900208.1\|442389_442575_+	hypothetical protein	NA	NA	NA	NA
WP_157748004.1\|442552_442870_+	hypothetical protein	NA	NA	NA	NA
WP_095678139.1\|444229_445744_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
461830:461846	attR	NA	NA	NA	NA

DBSCAN-SWA_6

451603 : 538697

Klosneuvirus(25.0%)

integrase,transposase

attL 464796:464855|attR 560746:560845

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037427548.1\|451603_452710_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_095678140.1\|454213_455575_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_037427571.1\|459256_459754_-	UPF0262 family protein	NA	NA	NA	NA
WP_083854381.1\|459764_460556_-	hypothetical protein	NA	NA	NA	NA
WP_050988455.1\|461095_461689_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_095678142.1\|463061_464399_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
464796:464855	attL	NA	NA	NA	NA
WP_037427578.1\|468272_468569_-	hypothetical protein	NA	NA	NA	NA
WP_157748006.1\|470224_470443_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.0e-12	61.8
WP_172900208.1\|472518_472704_-	hypothetical protein	NA	NA	NA	NA
WP_095678144.1\|472922_473171_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	7.1e-06	51.0
WP_172900209.1\|473167_473542_-\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	2.4e-05	45.9
WP_037427592.1\|474332_475967_-	MFS transporter	NA	NA	NA	NA
WP_037427591.1\|476368_476854_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_083854384.1\|477086_477593_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_095678135.1\|479346_480216_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.3e-33	34.3
WP_037427640.1\|481227_482454_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_095678142.1\|482896_484234_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_095678139.1\|486537_488052_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_095677963.1\|488237_489272_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_157213243.1\|491958_492183_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_095678146.1\|492151_493735_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_037427068.1\|493987_494179_-	YegP family protein	NA	NA	NA	NA
WP_172900210.1\|495399_496821_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_037427063.1\|496886_498425_-	malonyl-CoA synthase	Q75ZG1	Hepacivirus	2.0e-34	26.0
WP_037427060.1\|498677_499676_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	30.6
WP_037427057.1\|499668_500679_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-16	31.0
WP_037427054.1\|500675_501608_-	ABC transporter permease	NA	NA	NA	NA
WP_037427052.1\|501604_502579_-	ABC transporter permease	NA	NA	NA	NA
WP_037427050.1\|502604_504275_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_037427047.1\|506624_508376_-	CocE/NonD family hydrolase	NA	NA	NA	NA
WP_037427045.1\|508635_510045_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_037427043.1\|510192_511596_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.7e-16	27.2
WP_037427042.1\|511895_513074_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_050988424.1\|513412_513625_+	hypothetical protein	NA	NA	NA	NA
WP_157748010.1\|516590_517280_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.2e-24	33.2
WP_095678149.1\|517228_517579_-\|transposase	transposase	NA	NA	NA	NA
WP_037427106.1\|518293_519436_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_037427108.1\|519470_520670_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_050988431.1\|520963_522649_-	GMC family oxidoreductase N-terminal domain-containing protein	A0A1V0SI18	Klosneuvirus	8.4e-42	27.8
WP_037427109.1\|522942_524298_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_086022820.1\|524538_525087_-	UPF0262 family protein	NA	NA	NA	NA
WP_037427113.1\|525568_526033_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_037427127.1\|526446_527268_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
WP_037427115.1\|527346_528018_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
WP_037427118.1\|528014_528683_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
WP_037427128.1\|528807_529572_+	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	G9BWD6	Planktothrix_phage	7.0e-28	37.2
WP_037427129.1\|530185_531004_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
WP_037427120.1\|531551_532724_-	amidohydrolase	NA	NA	NA	NA
WP_037427122.1\|532950_534393_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_050988428.1\|534558_535899_-	diaminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	1.1e-23	25.4
WP_157213229.1\|536046_536214_-	hypothetical protein	NA	NA	NA	NA
WP_050988429.1\|536398_537127_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_095678150.1\|537359_538697_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
560746:560845	attR	NA	NA	NA	NA

DBSCAN-SWA_7

653071 : 671152

Corynebacterium_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037427698.1\|653071_654271_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	3.0e-94	48.2
WP_095678172.1\|654304_654508_+	nodulation protein	NA	NA	NA	NA
WP_034859947.1\|656012_656477_-	phasin	NA	NA	NA	NA
WP_014327878.1\|657805_658639_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_037427513.1\|658855_659662_-	glycosyl hydrolase	NA	NA	NA	NA
WP_037427514.1\|660553_660814_+	hypothetical protein	NA	NA	NA	NA
WP_015633423.1\|660810_661257_+	hypothetical protein	NA	NA	NA	NA
WP_095678173.1\|661398_665397_-	hypothetical protein	NA	NA	NA	NA
WP_161623566.1\|666453_666774_+\|transposase	transposase	NA	NA	NA	NA
WP_095677963.1\|667160_668195_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_095678114.1\|668380_669895_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_086022827.1\|670138_671152_-\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023063

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023063_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023063_1

2865851-2866051

Orphan

Consensus_repeat	Method
CCGCAACGCCCATGGCGCGCGCGACGATGATCGCGTCGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP023063_1

>merge|NZ_CP023063|1|2865851-2866051|PILER-CR
CGACGATGATCGCGTCGCGGTTTTCGGCAAGCGCCACCGCTCCTGCTGCCTGCCCCACGACCGGAATGCCCATGGCGCGCGCGACGATCACCACATGGCTGGTGACCGCACCCTCTTCCAGGACGAGGCCGCGGACGTTCTCGCGCGGATAATCGAGCAGTTCCGCCGCGCCCATGGCGCGCGCGACGATGATCGCGTCGC

>NZ_CP023063|1|1|2865851-2866051|PILER-CR
CGACGATGATCGCGTCGCGGTTTTCGGCAAGCGCCACCG	CTCCTGCTGCCTGCCCCACGACCGGAATGCCCATGGCGCGCG
CGACGATCACCACATGGCTGGTGACCGCACCCTCTTCCA	GGACGAGGCCGCGGACGTTCTCGCGCGGATAATCGAGCAGTTCCGCCGCGCCCATGGCGCGCGCGACGATGATC
GCGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023063.1\|WP_037426600.1\|2861764_2862406_-\|DUF4167-domain-containing-protein	unknown	unknown	gnl\|CDD\|372713
NZ_CP023063.1\|WP_037426565.1\|2871167_2872025_-\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143596
NZ_CP023063.1\|WP_037426574.1\|2872115_2872373_-\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|274017
NZ_CP023063.1\|WP_037426563.1\|2873255_2874155_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|273953
NZ_CP023063.1\|WP_095678000.1\|2869977_2870724_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	unknown	unknown	gnl\|CDD\|235350
NZ_CP023063.1\|WP_037426588.1\|2867137_2868412_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NZ_CP023063.1\|WP_050988414.1\|2868630_2869152_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NZ_CP023063.1\|WP_037426594.1\|2863625_2864708_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP023063.1\|WP_037426986.1\|2848479_2848716_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023063.1\|WP_037426566.1\|2870742_2871171_-\|DUF1178-family-protein	unknown	unknown	gnl\|CDD\|227630
NZ_CP023063.1\|WP_037426606.1\|2856735_2858691_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|223810
NZ_CP023063.1\|WP_037426572.1\|2872420_2873152_-\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP023063.1\|WP_037426603.1\|2858770_2861377_-\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_CP023063.1\|WP_037426586.1\|2869315_2869861_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|223340
NZ_CP023063.1\|WP_037426999.1\|2847912_2848194_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023063.1\|WP_037426984.1\|2847047_2847389_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023063.1\|WP_037426597.1\|2862721_2863618_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_CP023063.1\|WP_083854341.1\|2849029_2849233_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023063.1\|WP_095677999.1\|2849803_2850298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023063.1\|WP_037426562.1\|2874199_2874373_-\|Flp-family-type-IVb-pilin	unknown	unknown	gnl\|CDD\|226366

Protein	Function_ID	Function_description	E-value
NZ_CP023063.1\|WP_037426600.1\|2861764_2862406_-\|DUF4167-domain-containing-protein	gnl\|CDD\|372713	pfam13763, DUF4167, Domain of unknown function (DUF4167).	1.36105e-33
NZ_CP023063.1\|WP_037426574.1\|2872115_2872373_-\|glutaredoxin-3	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	2.25857e-45
NZ_CP023063.1\|WP_037426588.1\|2867137_2868412_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
NZ_CP023063.1\|WP_095678000.1\|2869977_2870724_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	4.62543e-150
NZ_CP023063.1\|WP_037426594.1\|2863625_2864708_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP023063.1\|WP_037426566.1\|2870742_2871171_-\|DUF1178-family-protein	gnl\|CDD\|227630	COG5319, COG5319, Uncharacterized protein conserved in bacteria [Function unknown].	2.06872e-80
NZ_CP023063.1\|WP_037426565.1\|2871167_2872025_-\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143596	cd07572, nit, Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases). This subgroup includes mammalian Nit1 and Nit2, the Nit1-like domain of the invertebrate NitFhit, and various uncharacterized bacterial and archaeal Nit-like proteins. Nit1 and Nit2 are candidate tumor suppressor proteins. In NitFhit, the Nit1-like domain is encoded as a fusion protein with the non-homologous tumor suppressor, fragile histidine triad (Fhit). Mammalian Nit1 and Fhit may affect distinct signal pathways, and both may participate in DNA damage-induced apoptosis. Nit1 is a negative regulator in T cells. Overexpression of Nit2 in HeLa cells leads to a suppression of cell growth through cell cycle arrest in G2. These Nit proteins and the Nit1-like domain of NitFhit belong to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 10.	1.20622e-132
NZ_CP023063.1\|WP_037426563.1\|2873255_2874155_+\|SAM-dependent-methyltransferase	gnl\|CDD\|273953	TIGR02072, Malonyl-_O-methyltransferase, malonyl-acyl carrier protein O-methyltransferase BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	1.75142e-17
NZ_CP023063.1\|WP_037426603.1\|2858770_2861377_-\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP023063.1\|WP_037426586.1\|2869315_2869861_+\|dihydrofolate-reductase	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	4.895e-31
NZ_CP023063.1\|WP_037426606.1\|2856735_2858691_+\|M23-family-metallopeptidase	gnl\|CDD\|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	7.44437e-49
NZ_CP023063.1\|WP_037426572.1\|2872420_2873152_-\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	2.60147e-75
NZ_CP023063.1\|WP_037426597.1\|2862721_2863618_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.77355e-110
NZ_CP023063.1\|WP_050988414.1\|2868630_2869152_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	7.85056e-13
NZ_CP023063.1\|WP_037426562.1\|2874199_2874373_-\|Flp-family-type-IVb-pilin	gnl\|CDD\|226366	COG3847, Flp, Flp pilus assembly protein, pilin Flp [Intracellular trafficking and secretion].	1.65838e-10

>NZ_CP023063.1|WP_037426594.1|2863625_2864708_-|peptide-chain-release-factor-1
MAKLPVEKMRELERRFAEIEARMSAGPAADVYVKLASEYSELQPVVTKIRVYEKAVAELADIEAMLADRATDKEMRDLAEMEKPEVEERIEALEEEIQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVTSSEKSQHQNRAKAMQVLRSRLFDMERQRADSERSADRKSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGEIDEVVDALLADHQASQLALLGERQN
>NZ_CP023063.1|WP_037426597.1|2862721_2863618_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MRETLDRLLSESRDRLRAAGIEHAAVDARHLISGLLGLSLAGFMARGGEPVSPEDAARIRAAIDRRMAREPVYRILGEREFHGLALSLSRETLEPRPDTETLVDCLIPHVRRIAAGKGHCRVIDLGTGTGAICLALLAGVLEARGTGTDISEDALATARENAKRNGLAERFLTLRSDWFEAVEGRFDVIVSNPPYIRSTVIDELEPEVRNHDPAAALDGGIDGLDAYRAIAQHAGRHLEADGVVGLEIGFDQKQAVTALFQAQSFRLIESRKDLGGNDRVLIFGQDVKGSITVEKMLH
>NZ_CP023063.1|WP_037426600.1|2861764_2862406_-|DUF4167-domain-containing-protein
MRPGQQNKRGRGRNNNNGSNNNNNNRKGSNPLTRTYDSSGPDVKIRGTAQHIAEKYAALARDAQSAGDRVMAENYLQHAEHYNRIIAAAQAQMQDRFQREERQDYQDRDLDRDQDDLDQVYAEPAPAAAAPAQAPAPSEPQPVIDGSGPQPVIEGMPAEVAMEEETSVASSGRTGSRRRSASRPRRQPRRNAGDEPAAEGQPGGDAPVLAASE
>NZ_CP023063.1|WP_037426603.1|2858770_2861377_-|ATP-dependent-chaperone-ClpB
MNIEKYSERVRGFLQSAQTHALAEGHQQFTPEHVLKVLLDDDQGMAASLVERAGGDVREARAGTAAALAKLPKVTGGSGSVYLSQPLAKVFTAAEEAAKKVGDSFVTVERLLLALAMESSAATAAILTKAGVTPTKLNQVINEIRKGRTADTANAEQGFDSLKKYARDLTEEARDGNLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLMALDMGALIAGAKYRGEFEERLKAVLNEVRSEEGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQLKIEREALKKETDASSKDRLEKLELDLAALEEQAATLTARWQAEKQKLGRAADLKKQLDEARNELQIVQRKGEFQRAGELAYGVIPNLEKELAEAESQDGSSANAMVQEVVTPDNIAHVVSRWTGIPVDKMLEGEREKLLRMEDELAKWVVGQGDAVQAVSRAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGAPPGYIGYEEGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTMIIMTSNLGAEYLTGLGENEDSDAVRDQVMEVVRAAFRPEFLNRVDEIILFHRLRRSEMGAIVDIQLERLRKLLGERKITLELEEEARAFLADKGYDPAYGARPLKRAIQKYVQDPLAEKMLQGEFPDGSAIKIVAGSDRLNFKRGTPAAKEAA
>NZ_CP023063.1|WP_037426606.1|2856735_2858691_+|M23-family-metallopeptidase
MISNRNMLRSLGDQPPILADGRRAPDRREISMRWLSGTFLTGITSSLLMGVALFAALDGRQQLAIPAEAFAAVDPAAPGAAPISAAKRGNRILSPNIVAKPADKTVMEVSTMIHDGEKEVVRRQPFVHVKMALAANHQASEDYPAFDPLAIFSTDEAEAEPPPAKTGTIYGSDVESEVALKTVNFPLKGSGFSFAPSMSLDEVEENVRTNGSVLTEGNTQVASLFYVDPQRFASDANNLDLIQGLSARIVEENMTVSTHETITEQSTEYADDVIPVRRATPIATVLVNAGYARAQADDAAGYIETALGAKELGAGDVLRIGIIQKGEEARIVRATVYSRNRHVLTMAVDDRGRFVPGAEPPKLDAVATAFDDTGTPVITSGHDLPRVYDGIYRAALSYGMNAEMISLIVKLLASNVDFQAQLKPTDSLEAFFSVTDESGQATEESELLYVDAKFGDAETRFYRFHDPDDNSIDYFDEAGKSIRQFLLRNPVPNGHFRSGFGMRRHPILGFSRMHTGVDWSAPRGTPIIAAGNGVVEKAGWDSGGYGNQTLIRHANGYVSSYNHQSAIAKNVKAGAKVVQGQVIGWVGTTGLSTGPHLHYELIVNGNKVDPLRIRLPGGKSLSGEVLAKFEKERERIDELLGKDDPSQVASQ
>NZ_CP023063.1|WP_095677999.1|2849803_2850298_+|hypothetical-protein
MTGQAAIPALDHMLDELEQQGLTLARQLDILPATSGPVATPPLNGGLLRSAIPAVRTMLSTREDAFDESWISIARQLVQKVVIAPSADGKSAELTIHGRLAAILAAQEAWREVSRELRDQQSAEYVRMRSAGAFKSLADKTKFLLQRGLRGEANAKRPALGGPF
>NZ_CP023063.1|WP_083854341.1|2849029_2849233_+|hypothetical-protein
MTQRYELHDDSNGLWSVIDRFTGWPARWRGISQTGLDYFDADDLTDLLNLLDERRRAKGRPESDGLE
>NZ_CP023063.1|WP_037426986.1|2848479_2848716_+|hypothetical-protein
MKSKHEEDALAIRAWESEGGAPNRSGQRDEYGRRFDGDGTYTIYHLFTGETAEIGPWKMEGLNPKNAARALHILNNPS
>NZ_CP023063.1|WP_037426999.1|2847912_2848194_+|hypothetical-protein
MFARTTHRTVHFDQPFWMPDLGEMVPAGDYEVDEDEELIEGISWLAYRRVATFIKLPATAENKYRMRLVAIDPEELERLIAVDRHEDAISPSP
>NZ_CP023063.1|WP_037426984.1|2847047_2847389_-|hypothetical-protein
MTLDQILERTKPYVIGLIVGLIAAPIIGFNAGWITTTTASTLAAETARVDALAGICSSAAGRMATASSTDLATLKGYDNRAKRDELVATIMADIQVPADILGRVSTSCSRTLS
>NZ_CP023063.1|WP_037426588.1|2867137_2868412_-|aspartate-kinase
MARIVMKFGGTSVADLNRIHNVARHVKREVDAGHEVAVVVSAMSGKTNELVGWVENMPKVAGSNAPFYDAREYDAVVASGEQVTSGLLAIALQSMGINARSWQGWQLPVKTDNAHGAARILDIDGADIIRRMGEGQVAVVAGFQGLGPDNRVATLGRGGSDTSAVAIAAAVKADRCDIYTDVDGVYTTDPRIEPKARRLKKIAFEEMLEMASLGAKVLQVRSVELAMVHKVRTFVRSSFEDPDAPGMGDLLNPPGTLICDEDEIVEQEVVTGIAYAKDEAQISLRRLADRPGVSAAIFGPLAEAHINVDMIVQNISEDGSKTDMTFTVPSGDVNKALKVLSDNKEKIGYDVAQSESGLVKVSVIGIGMRSHAGVAASAFRALAEKGINIKAITTSEIKISILIDGPYAELAVRTLHSAYGLDKS
>NZ_CP023063.1|WP_050988414.1|2868630_2869152_-|methyltransferase-domain-containing-protein
MRDRIGWAVEMLAPEASECILEIGCGHGLAATMVCDRLVDGRLLAIDRSAAMIEAARRRNAAFVADGRAEFVVAELARAEFGSAVFDKAFALRVGIFARGNPERELAVLARYLSPFGRLFLFHDEPSRTANDLVPRLEAGVCRSGWMVEARATHRVRGCDVACVVARHPDFAA
>NZ_CP023063.1|WP_037426586.1|2869315_2869861_+|dihydrofolate-reductase
MRKVIMWDMVSVDGFFEAPGHDIDWFVFEDELAAYIGETQLEAGTLLFGRVTYEMMAAYWPSAEGNIATFMNGAEKYVFSKTLTSAEWNNTTLVSGDAVAEVERLKQRDGGTIFIFGSADFAATLTARGLVDEYRLGINPVLLGKGTPLFQNIPERTKLDLTHVRPLKSGVVILHYQPAKA
>NZ_CP023063.1|WP_095678000.1|2869977_2870724_+|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG
MSETARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLAYIRDKVCEQFDRDPKSPQPLKGLRLLDIGCGGGLLSEPMARMGADVLGADASEKNIGIAKAHAAGSGVNVDYRAVTAEALAEAGESFDIVLNMEVVEHVADVDFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAAENVLRWLPRGTHQYDKLVRPEELEKPLEASGMEVADHTGVFFNPLANQWNLSKDMDVNYMIVAKRPI
>NZ_CP023063.1|WP_037426566.1|2870742_2871171_-|DUF1178-family-protein
MIRYNLSCDNGHGFEGWFSSSGDFDRQAKAHLVTCPTCGSGSVSKQLMAPTVSTARKREARQALVMDQAQKETIAKLREMVKTIRANAEDVGERFPEEARKIHYGEADQRGLIGKATAEEATALLEEGIEIAPLPVLPDDTN
>NZ_CP023063.1|WP_037426565.1|2871167_2872025_-|carbon-nitrogen-hydrolase-family-protein
MSFKAAAVQMCSGVDPARNVETMVRLVRQAASQGASYIQTPEMTGAIQRDRAGLRSVVKDEADDLVFEEAARLAGELGVYLHVGSTPIALPDGKVANRGFLFGPDGKKICDYDKIHMFDVDLDNGESWRESAVYRPGATARMVDLPFGKLGFAICYDVRFPELFRQQAVAGAEIMSVPAAFTRQTGEAHWEILLRARAIENGLFVIAAAQAGQHEDGRETFGHSMIVDPWGRVLAQAGPAGEAVLIAEIDVAAVSGARARIPNLRNARDFVLDQVVPAGKGGVAA
>NZ_CP023063.1|WP_037426574.1|2872115_2872373_-|glutaredoxin-3
MASVVIYTRQFCGYCTRAKKLLESKGVDFVEHDATYDPALRQTMIEKSNGGRTFPQIFINDVPVGGCDDLHALDRAGKLDEMLAA
>NZ_CP023063.1|WP_037426572.1|2872420_2873152_-|ComF-family-protein
MFQTFGGAAVNLVFPPVCCGCGRLTGDAHAVCPSCWAELRLIERPYCEILGSPFAFDPGPGAVSPQAIANPPPFHRLRSVSLLEGIARDLVHGLKYRDRTDLARMMAEWMVRASDGAVAAADMIVPVPLHAFRLWRRKFNQSAELARCVSERAGKPYRPEVLRRVRRTRRQVGLGARAREENVRGAFAVPESAKSSLVGKRIVLVDDVYTTGATVSAATRALRRAGAAEVTVLTFAMALPEPI
>NZ_CP023063.1|WP_037426563.1|2873255_2874155_+|SAM-dependent-methyltransferase
MEIVFDQSLVEAHRRKALRRADPKATFLLDIVAQELADRVSVVDRYFDRAMELHGYTGAAAARLAETGKVGTIERVETDEGFGSPHAPVTIAPLERIPAEAQTVNLLVSPLSLHLTNDTPGVFIQARRALKPDGLFLAAIPGSGTLQELRECLLSAEAELTGGASPRVVPFADVRDMGGLLQRAGFALPVADAETYTVRYDSLFGLLKDLRAMGMTNPLKARSRRPVPRRFFLRAAEIYAEHFSDPDGRVRATFSIIYVSGWAPHESQQKPLKPGSAKQRLSDALGVSEHALKGSGKQS
>NZ_CP023063.1|WP_037426562.1|2874199_2874373_-|Flp-family-type-IVb-pilin
MDKLRSLLRSRDGATVVEYGLIAALISVALLLGFQNFSNELLNVLNLIADAMEDSWT

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Crispr_ID: NZ_CP023063_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023063_2

3767076-3767159

Orphan

Consensus_repeat	Method
AGCGGTTTTGGGGCAACGACATGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023063_2

>merge|NZ_CP023063|2|3767076-3767159|CRISPRCasFinder
AGCGGTTTTGGGGCAACGACATGCATGAATCAAGGATGCATGTCGCCCAAAAGTGCGTAGCGGTTTTGGGGACAACGACATGCA

>NZ_CP023063|2|1|3767076-3767159|CRISPRCasFinder
AGCGGTTTTGGGGCAACGACATGCA	TGAATCAAGGATGCATGTCGCCCAAAAGTGCGTA
GCGGTTTTGGGGACAACGACATGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023063.1\|WP_037422704.1\|3773960_3774566_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP023063.1\|WP_037422748.1\|3760637_3762890_+\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319846
NZ_CP023063.1\|WP_037422713.1\|3771060_3772035_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP023063.1\|WP_037422741.1\|3766081_3767053_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224005
NZ_CP023063.1\|WP_037422710.1\|3772031_3773252_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP023063.1\|WP_018235360.1\|3767176_3767572_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142
NZ_CP023063.1\|WP_037422729.1\|3769676_3770201_-\|TIGR02281-family-clan-AA-aspartic-protease	unknown	unknown	gnl\|CDD\|131334
NZ_CP023063.1\|WP_083854184.1\|3773377_3773935_-\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP023063.1\|WP_037422744.1\|3764943_3766077_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962
NZ_CP023063.1\|WP_037422726.1\|3770333_3770963_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_CP023063.1\|WP_037422757.1\|3756264_3759018_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP023063.1\|WP_037422761.1\|3752878_3754204_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP023063.1\|WP_037422781.1\|3754268_3755831_-\|response-regulator	unknown	unknown	gnl\|CDD\|306677
NZ_CP023063.1\|WP_037422701.1\|3774722_3775148_-\|pilus-assembly-protein-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379302
NZ_CP023063.1\|WP_037422718.1\|3767568_3768366_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
NZ_CP023063.1\|WP_037422759.1\|3755843_3756215_-\|response-regulator	unknown	unknown	gnl\|CDD\|381100
NZ_CP023063.1\|WP_037422745.1\|3763411_3764947_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226364
NZ_CP023063.1\|WP_037422751.1\|3759984_3760317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023063.1\|WP_037422754.1\|3759014_3759773_-\|DUF3365-domain-containing-protein	unknown	unknown	gnl\|CDD\|378734
NZ_CP023063.1\|WP_037422715.1\|3768367_3769684_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276

Protein	Function_ID	Function_description	E-value
NZ_CP023063.1\|WP_037422704.1\|3773960_3774566_-\|pilus-assembly-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	2.09818e-33
NZ_CP023063.1\|WP_037422748.1\|3760637_3762890_+\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319846	cd07546, P-type_ATPase_Pb_Zn_Cd2-like, P-type heavy metal-transporting ATPase, similar to Escherichia coli ZntA which is selective for Pb(2+), Zn(2+), and Cd(2+). Escherichia coli ZntA mediates resistance to toxic levels of selected divalent metal ions. ZntA has the highest selectivity for Pb(2+), followed by Zn(2+) and Cd(2+); it also shows low levels of activity with Cu(2+), Ni(2+), and Co(2+). It is upregulated by the transcription factor ZntR at high zinc concentrations. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP023063.1\|WP_037422713.1\|3771060_3772035_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	3.07157e-136
NZ_CP023063.1\|WP_037422741.1\|3766081_3767053_+\|ABC-transporter-permease	gnl\|CDD\|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	1.37062e-115
NZ_CP023063.1\|WP_037422710.1\|3772031_3773252_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP023063.1\|WP_018235360.1\|3767176_3767572_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	1.01062e-69
NZ_CP023063.1\|WP_037422729.1\|3769676_3770201_-\|TIGR02281-family-clan-AA-aspartic-protease	gnl\|CDD\|131334	TIGR02281, Uncharacterized_protein_RP867, clan AA aspartic protease, TIGR02281 family. This family consists of predicted aspartic proteases, typically from 180 to 230 amino acids in length, in MEROPS clan AA. This model describes the well-conserved 121-residue C-terminal region. The poorly conserved, variable length N-terminal region usually contains a predicted transmembrane helix. Sequences in the seed alignment and those scoring above the trusted cutoff are Proteobacterial; homologs scroing between trusted and noise are found in Pyrobaculum aerophilum str. IM2 (archaeal), Pirellula sp. (Planctomycetes), and Nostoc sp. PCC 7120 (Cyanobacteria). [Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.08326e-41
NZ_CP023063.1\|WP_083854184.1\|3773377_3773935_-\|pilus-assembly-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	4.40241e-25
NZ_CP023063.1\|WP_037422744.1\|3764943_3766077_+\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.28556e-109
NZ_CP023063.1\|WP_037422726.1\|3770333_3770963_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	6.50092e-137
NZ_CP023063.1\|WP_037422757.1\|3756264_3759018_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	7.26712e-57
NZ_CP023063.1\|WP_037422761.1\|3752878_3754204_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.95266e-145
NZ_CP023063.1\|WP_037422781.1\|3754268_3755831_-\|response-regulator	gnl\|CDD\|306677	pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain.	9.52848e-63
NZ_CP023063.1\|WP_037422701.1\|3774722_3775148_-\|pilus-assembly-protein-N-terminal-domain-containing-protein	gnl\|CDD\|379302	pfam13629, T2SS-T3SS_pil_N, Pilus formation protein N terminal region.	9.06938e-21
NZ_CP023063.1\|WP_037422718.1\|3767568_3768366_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	2.82339e-142
NZ_CP023063.1\|WP_037422759.1\|3755843_3756215_-\|response-regulator	gnl\|CDD\|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.19696e-48
NZ_CP023063.1\|WP_037422745.1\|3763411_3764947_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	0
NZ_CP023063.1\|WP_037422754.1\|3759014_3759773_-\|DUF3365-domain-containing-protein	gnl\|CDD\|378734	pfam11845, DUF3365, Protein of unknown function (DUF3365). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 198 to 657 amino acids in length.	4.47613e-20
NZ_CP023063.1\|WP_037422715.1\|3768367_3769684_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0

>NZ_CP023063.1|WP_037422741.1|3766081_3767053_+|ABC-transporter-permease
MDFFHVLVVLLESTIRVSVPLVFAALAGLFTERAGVFDIGLEGKMLGAAFAAGAVAAVTQSVWMGLLAAILISILLSLVHGYASITQRGNQIVSGVAINFIVAGSTVILGEAWFRQGGRTPALAEGARFQTINLPGADAVRDVPVLGPIYADLLSGHFLLTYLAFAMVPASWWILYRTRFGLRLRAVGENPGAVDTAGISVIWLRYRAVICCGILCGFAGAYLSLAMTAGFVKGMTAGKGYIALAALIFAKWRPKNVMFACLLFGFLDALAIRLQGTPLPLVGQVPVQLMQALPYILTVILLAGFIGKAIPPKAGGVPYVKER
>NZ_CP023063.1|WP_037422744.1|3764943_3766077_+|ABC-transporter-permease
MSTPYAKLPGWVEYGLIPLINLAVAFLVAGLVVLLVGENPFEAAYHLINGAFGRGEYIGFTLYYATTFIFTGLAVAVAFHAGLFNIGGEGQAYVGGIGVALACLWLDQVMPWYVVFPLAIVGSVFFGALWAFLPGWLQAKRGSHIVITTIMFNFIASSLMVYLLTRVLKPLGSMAPQTRTFAEGGQLPKLDWLLSIFGLNVGTAPFNISFLLALAAAFGVWVLIWRTKLGYEMRTMGHSPSAARYAGIRESRITVITMMISGGLAGMMALNPIMGEQFRMQLDFVQGAGFVGIAVALMGRSHPGGIIPAAILFGVLYQGGAEIAFEMPSISRDMIVIIQGLVILFAGALENMFRPAITRAFAMRGQRAAAVVQTKGA
>NZ_CP023063.1|WP_037422745.1|3763411_3764947_+|ABC-transporter-ATP-binding-protein
MDNIAIELRGIDKSFGPVHANKDINLKVRKGTIHGIIGENGAGKSTLMSILYGFYQADNGEIFVDGKEVAIRDPNTAISVGIGMVHQHFMLVENFTVLENVMLGAEDSQILNKGIAKARQELKRLEREYALEVNPDALIEELPVGLQQRVEILKALYRRADILILDEPTGVLTPAEADHLFRILGQLKAQGKTIILITHKLREIMAITDEVSVMRRGEMVATRTTRETSVEELAELMVGRRVLLRVEKGEASPGDVKLAVEGLTVKDSRGVTMVDDVSFEVRAGEIVGIAGVAGNGQSELLEAIAGIRRATSGTVLLNGRSVDVTGHRDPAELRARGLAHVPEDRHHVGLVLKFEESENAILGYHNDPRYLKGAFLDIDAIRKDAEEKIAKYDIRPPNARLKTANFSGGNQQKIVLAREMERGPDVLIIGQPTRGVDVGAIEFIHKRIIEMRDQGKAVLLVSVELDEIRSLSDRILVMFAGRVVGERSPEATEGELGLLMAGVEGRKEAAE
>NZ_CP023063.1|WP_037422748.1|3760637_3762890_+|cadmium-translocating-P-type-ATPase
MTGLVRESRYRVEGMDCASCAAKIDTAVRRVVGVGDVSVSVTAATMTVRHADRGDVGPAILRKVAGLGYGLSPLTGEASPALSSAGEDACCGHAHAAGSADHAHGDAFRSAPSADLPNAGAAVPLRRAQPWWRTRKGRLTVACGVALAGAYGIGKLWPATEPWIFTLAMLVGLLPIARRAVMAASAGTPFSIEMLMTIAAAGAVIIGAGEEAAMVVFLFLIGELLEGIAAGKARASIEALTALVPKTALVDAEGGGLIEVSAESLPVGATILVRPGDRLAADGVVLSGESGIDEAPVTGESAPVLKGPGDSVFAGTVNGDGALRLRVTAAAADNTIARVIRLVEEAQEMKAPTERFIDRFSRTYTPAVALVAALVATVPPLFLGGLWQEWIYKGLALLLIGCPCALVISTPAAIAASLSAGARRGLLIKGGAVLETVGKVTAVAFDKTGTLTQGKPMVTDIIGFNRSETEVLSHAAALERGSSHPLAQAILSRAEADRVAVPAVSDVKALGGKGVSGRAAGADLFLGSPQEADRRVALTAEQKARVATLHDQGKTVSLLIADGRVAGALAMRDEPRPDAAAGVKALAGQGLRVIMLTGDNRCTAEAVAGRLGIEARAELLPQDKQRIVGELKAEGHVVAKVGDGINDAPALAAADVGIAVGGGTDVALETADAASLHGRVADIAAMVGLSRATMRNIHQNIAMALGLKGVFLVTTIVGVTGLWPAILADTGATVLVTVNALRLLWTPVEA
>NZ_CP023063.1|WP_037422751.1|3759984_3760317_+|hypothetical-protein
MKHIVLVAAGMAALAFTSAAHAEDLVFTLKNDTSATLVRFHTSPVGVEEWEDDVFGSQVLEPGESIELTIADGRDVCEYDMRFEFDENSDLETTVDKQDLCKLASYTIHE
>NZ_CP023063.1|WP_037422754.1|3759014_3759773_-|DUF3365-domain-containing-protein
MGALKGFTRNCAVAVFSGCMLLSPPAPAEEAADVATGTRLAELLRAARSVLSNYQSLINDPAVADKHLDGERFTAEAIALYGKRTGSPLISDDLAERDRKLLQAQVDAMREVIDEHQDDINRPGIAFKGFVPAVFARLMNEKFAVKVGNEALVRVTAPEVLVRNRKSLPDAWEAKVIEEVFPDPQRPKEASYTEVTTVNGRPAFRMLLPEYYTDSCLVCHGVPKGEIDVTGYPKEGGKAGDLGGAISIVLFQ
>NZ_CP023063.1|WP_037422757.1|3756264_3759018_-|response-regulator
MSALREQLQPLKPVPAPRLASRIANLPISARVATLTAAGMISLVLSSVFLTQALHRSAARMAETQELFDRAASAAAAHVAFGDLRYWLTDLSVSLLMNSQRNAEQARERLQVQLERLAKHSPAAVREIRTEIDAYIATALQATESYTQDNRILGNTLLAEARTHSGHVDRNLNRLVEQVKADAEAARNEVVAQTQKTATTAAILVGGVVLIGSLLTLLVLRSIVGPLRRLNRVIGDLTEGRYDVEVPQEGGDEFGAMAKTLSLFQQNAIEKKKLEDQAERQRRTVAAALEAISDGFVLYDPDDRILVANSKYCEIFPSHKPNELRGKSFREILEQNLAKGKVDLEGKAPEEWIEERLRLHRDPAGLVDERRFNDKWVRITKRKIPDGGTVAVYTDITELKQRQVELERAKSNAEAASEAKSRFLASMSHELRTPLNAIIGYSEMLIEEARDHDEDELVPDLEKIASAGRHLLSLINDILDLSKIEANKMEVFLETFDVARLLGDVTATVAPLMAKNRNEFIQEFDGDLGEMHSDQTKLRQNLFNLLSNAAKFTNSGRVTLSARREERADGDWLVFKVSDTGIGMTPEQQNRLFNAFTQADASTTRNYGGTGLGLSITRSFSRMIGGAVDVESEVGKGSVFTMEVPARCRREAGVAPAAEPSQIIQPGRTALIIDDDPAARNLIAKALAEAGLASMQAASGAEGITVAREHRPDAIILDIIMPHQDGWSVLRTLKSDPDLCTIPVILATILADRELGLSLGAVEYLTKPIDTDKLIRTVEACGGGNRDVLVIDDDLASREFLRRILVKRDWMVHEAGDGVRGLDMMKRLLPRLVLLDLLMPEMDGFQTLSEMQGIPELQNIPVVVVTSKDLSANELRWLRERAVAVVNKGANSRSQLVEALERQIASRETAGQTVGDR
>NZ_CP023063.1|WP_037422759.1|3755843_3756215_-|response-regulator
MTRILLVEDNEMNRDMLSRRLSRRGFDVLIAENGKAGVELAASERPDVILMDMSLPVMDGWEATRQIKANPLTSGIPVIALTAHAMASDRDMALDAGCDDYDSKPVDLTQLVRKIEQLLTASP
>NZ_CP023063.1|WP_037422781.1|3754268_3755831_-|response-regulator
MSVGNEFQRQALATHVAQRMAGPAQAILGFQELLLEQARDLGALELLADLERIGAAARQLNSFIESLVDAKTGCPGGDAAEAEARLRHDLRTPLNAIIGYSEMILEEAGEPQPHTLKDDLGVILGAASELLKQVDAIAGLSRGAAIGALQPRDETGLDTAELERLLFQSRQEAWTDQGGRILVVDDVASNRDLLSRRLRHEGHRVVVADSGRSALARLAEGEFDLILLDILMPDMNGIEVLARLKAEDRWRHVPVIMISGLSEVAAVARCIEAGADDYLTKPFNPVLLRARINSTLEKKRWLDREHRYLEQIEMEKRRADSLVHAILPDQIVARLQGGEEIIADRFEEVSILFADIVGFSPIAARLPPSDLVRRLDAMFSKFDLLTEQHRVEKIKTIGDAYMAACGIPEPSADHADRIVALGKSMLEALQGSASDTDRFRVRIGVHSGPVVAGLIGRLRFVYDVWGETVNIASRLESQGVPDSVQISEATRRALHGRWTLEPRRALDLKGIGKIETYLVR
>NZ_CP023063.1|WP_037422761.1|3752878_3754204_+|MHS-family-MFS-transporter
MAVQVPKDFRRVIVAASVGNIIEWYDFYIFGSLAAVLSVKFFEQSHPVAALLSTIALFTAGFLIRPLGAFLFGWMGDRVGRKYTFLITLSGMGLGTGAIGLIPTYEAIGLTAAFLLFGLRMIQGLCLGGEYGGAITYVAEHVPDERRGYYTGWLQTSPTLGIVVSLAVIIATRTYFGNEVFEAWAWRVPFLVSFLLVGIAIYIRLQLQETPIFAEIKAKGQMTRNPWKEAFLSSNIKFVGIATIVLIGQGVVWYSGQFWALYFLQQVSKVDALNSAYIVGAALLLATPSLIFFGWLSDIIGRKPVILGGMLLAAITYYPLYLWLGTVTQPDNINYPTAIFIIFILVCYVGMVYGPVGAFLAEYFPGRIRYTSVSVPYHIGNGWGGGLVPFVTSAAFAATGSVGYALIYPIVVPAVCFLLALYLMPETHKVSIWEPVEPRAG
>NZ_CP023063.1|WP_018235360.1|3767176_3767572_+|cytidine-deaminase
MPKNELFVAAREAMAKAHAPYSKFPVGAAIRAEDGRIYTGANIENLSFPEGWCAETTAISHMVMAGQRKIMEVAVIAEKLALCPPCGGCRQRLAEFSGASTRIYLCDETGIKKSLALSDLLPHSFETEILG
>NZ_CP023063.1|WP_037422718.1|3767568_3768366_+|purine-nucleoside-phosphorylase
MTGAAEFLRDKLGDLSPRHAIVLGSGLGSLVEAVSAPVRFSYADIPGFPVSSVSGHAGELVLGRLGDAPVAILSGRVHYYERGDANAMRVPIETLKRIGVENLILTNSAGSLREDMPPGSVMRIADHIAFSGANPLIGVESDDRFVGMTNAYDAALAVQMEEAAERLGIPLARGVYMWFSGPSFETPAEIRMARVLGADAVGMSTVPEVILARFFGMKVAAASVITNYGAGMTGAELSHHETKEMAPFGGQRLASILKEMVASEG
>NZ_CP023063.1|WP_037422715.1|3768367_3769684_+|thymidine-phosphorylase
MAPLPQEVIRKKRDGGRLEPAEIRGFIEGVTDGSVSEGQVAAFAMATWFSGMNRDECVALTLAMRDSGETLDWSAFGRPIADKHSTGGVGDNVSLMLAPIIAACGAAVPMISGRGLGHTGGTLDKLESIPGYDIQPPPELFRQIVEEVGCAIIGQTANLAPADKRLYAIRDVTATVDSVPLITASILSKKLAAGLQSLVLDVKVGNGSFLTDPGETEILARSLVDVANGAGVHTSALITDMNEPLADAAGNALEVGNCLAYLRGEKAGTRLDQVVMAFAAEMLVAARMSAHRAEGEAMARRALESGDAMERFALMVHGLGGPADFVDRSDAYLERAPAIIPVPAHRDGYLSACETRELGMTIIALGGGRTRPDDRIDHRVGLAGLKPLGTRVERGEPIAFVHAADRQRAEAVRDRVAGLYVIADEPPQPSPVIVSRII
>NZ_CP023063.1|WP_037422729.1|3769676_3770201_-|TIGR02281-family-clan-AA-aspartic-protease
MLTRLIAFAGGLAAIALVVPDLVSNYLDRRESGSPQQAAAGATPAAASNAGGKAVVLEADRSGHFVGTFRINGRPEQGLVDTGASTIAINASLARRFGITVGSLSFDARAQTANGVVEAASVSLDRVEIGGISLRNVEAMVLPDKALSGMLVGMSFLNRLSSYRVEDGALQLVK
>NZ_CP023063.1|WP_037422726.1|3770333_3770963_-|uracil-phosphoribosyltransferase
MDGVTVIDHPLVQHKLTIMRKKETSTAGFRRLLREISTLLCYEVTRDLELTIERIETPLEEMDSPILEGKKLVFASILRAGNGLLEGMLELVPSARVSHIGVYRDHETLQPVEYYFKAPENLSERLIIVVDPMLATGNSSIAAIDKLKERGARNIRFLCLLAAPEGIRNFQGAHPDVPIFTASIDSHLNEKGYIMPGLGDAGDRMYGTK
>NZ_CP023063.1|WP_037422713.1|3771060_3772035_-|adenosine-deaminase
MTAHLKKAELHCHIEGATPPELALRQAGKYGVDTSAIIREGAYVWEDFTSFVKCYDAVASLFRTEGDYALLAETYLTELAEAGTIYSEIIVSPDHGNTIGLGADAYLEGLAAGMEAARAKRGIESRMLITGIRHLGPESVVRTAEYAAMRRHPLVTGFNLAGEERLHSVAEFSRAFDVVRDAGLGLTIHAGELSGAFSVRDALDHVRPSRISHGVRAIEDADLVKRLAEEGVVLEVCPGSNISLQVFPDFFSHPLRPLYEAGVRVTLNSDDPPFFHTSLAQEYEIAAHVMGFGDSEIDRMTRTAIEAAFVDEPTRERLLKALHM
>NZ_CP023063.1|WP_037422710.1|3772031_3773252_-|phosphopentomutase
MARAFLFVLDSFGIGGAPDAEAFGDRGADTLGHIAEFCAAGAGDRAGLREGPLHLPNMSALGLIHAARLATGRVPAGMPLPERVYGVYGAASEVSRGKDTPSGHWEIAGTPVRFDWGYFPSEGEAFPPELVEAICREGEVAGILGNCHASGTDIIARHGEEHMRSGKPICYTSSDSVFQIAAHERSFGLERLLELCQVVRRLVDDYNIGRVIARPFVGDNPDNFTRTGNRRDYSVLPPEPTVLDRLEEAGRQVHAIGKIGDIFAHQGVTKLTKANGNMALFDASLAALEEAEEGDLVFTNFVDFDMLYGHRRDVPGYAAALEAFDARLPDLDRRLRPGDMVILTADHGCDPTWRGTDHTRERVPVLMFGPSLRSRSFGVANSFAHIGETVARHLGIAPGPHGRSLL
>NZ_CP023063.1|WP_083854184.1|3773377_3773935_-|pilus-assembly-protein
MTSARRILSRLSHDRRGVGGVEFALVAPLLIMAYIGAFELSVGLNVVRKVARASSTVADLVSQGLSVDTDFLDSMNNVAESVLAPYAGPDYTLKITGIQVNGTTTGTVLWSRDQDGGTPYPANSTTTVPSDLEAVNAFVVRTELVVPHELMLFSQDLSSNVSTIDLSKTSYYRQRSGTKIECTDC
>NZ_CP023063.1|WP_037422704.1|3773960_3774566_-|pilus-assembly-protein
MSIKVKASTANRRAPRPLFRRLLGDKRGGTAIEFAILALPFFIVVFASIETFVAFAGEQLLANATDTLARKIRTGEITQEMGESEFRQAFCDEIAILLTCSATEVDEPEKLYLDVRQVADPSQFPAAVPRVGSGDSSDLDTSGFQFAPGGGKEYTMVRAYYRWRVITDLVRPYVTNLRSAGSSMPDDYLMVATATFRNEDY
>NZ_CP023063.1|WP_037422701.1|3774722_3775148_-|pilus-assembly-protein-N-terminal-domain-containing-protein
MNTHFATKQVATLAFLATALFGFFVAEATQAAEQMMRVYMDHARVLKLDRPVSKVIIGNSDVADATVADSKTIVLTGRNFGTTNLVILDQDGNAIVDERILVSIDEGNTVRVYKQTTRTVFSCSPNCERHAERKATTSSSN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023063_2	2.1\|3767101\|34\|NZ_CP023063\|CRISPRCasFinder	3767101-3767134	34	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1443865-1443898	8	0.765
NZ_CP023063_2	2.1\|3767101\|34\|NZ_CP023063\|CRISPRCasFinder	3767101-3767134	34	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	939785-939818	8	0.765
NZ_CP023063_2	2.1\|3767101\|34\|NZ_CP023063\|CRISPRCasFinder	3767101-3767134	34	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1120955-1120988	9	0.735

1. spacer 2.1|3767101|34|NZ_CP023063|CRISPRCasFinder matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 8, identity: 0.765

---tgaatcaaggatgcatgtcgcccaaaagtgcgta	CRISPR spacer
atgcggccca---atgcatgtcgcccaacagtgcgta	Protospacer
   .*. .**   *************** ********

2. spacer 2.1|3767101|34|NZ_CP023063|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 8, identity: 0.765

---tgaatcaaggatgcatgtcgcccaaaagtgcgta	CRISPR spacer
atgcggccca---atgcatgtcgcccgaaagtgcgta	Protospacer
   .*. .**   *************.**********

3. spacer 2.1|3767101|34|NZ_CP023063|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 9, identity: 0.735

---tgaatcaaggatgcatgtcgcccaaaagtgcgta	CRISPR spacer
atgcggccca---atgcatgtcgcccgaaggtgcgta	Protospacer
   .*. .**   *************.**.*******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1263656 : 1277942

uncultured_Mediterranean_phage(81.82%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037422898.1\|1263656_1264520_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.4e-32	35.3
WP_037422895.1\|1264512_1265238_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.5e-40	42.9
WP_037422892.1\|1265309_1266419_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	8.6e-11	33.7
WP_018239649.1\|1266510_1266717_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	2.8e-08	69.8
WP_037422887.1\|1266787_1267501_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_037422884.1\|1267497_1268340_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.3e-43	41.0
WP_037422881.1\|1268479_1269763_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.8e-100	46.3
WP_037422878.1\|1269789_1270560_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	8.1e-24	33.2
WP_037422875.1\|1270556_1271210_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.5e-15	34.0
WP_037422873.1\|1271429_1272080_+	hypothetical protein	NA	NA	NA	NA
WP_037422870.1\|1272244_1273777_+	LysM peptidoglycan-binding domain-containing protein	Q8SBN9	Clostridium_phage	7.2e-16	35.9
WP_037422916.1\|1273804_1274680_-	ATP-binding protein	NA	NA	NA	NA
WP_037422867.1\|1274993_1275326_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.7e-10	36.5
WP_037422864.1\|1275374_1277942_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.3e-54	44.4

DBSCAN-SWA_2

1423005 : 1465760

Sinorhizobium_phage(31.43%)

tail,protease,tRNA,terminase,portal,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037421879.1\|1423005_1423755_-\|tRNA	alanyl-tRNA editing protein	NA	NA	NA	NA
WP_037421881.1\|1423762_1424803_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	1.0e-45	38.7
WP_037421884.1\|1425111_1425960_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_037421887.1\|1425947_1426274_-	ligand-binding protein SH3	NA	NA	NA	NA
WP_037421890.1\|1426270_1426627_-	multidrug transporter	NA	NA	NA	NA
WP_157213181.1\|1426912_1427158_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_037421896.1\|1427154_1427352_-	hypothetical protein	NA	NA	NA	NA
WP_037421899.1\|1427355_1427727_-	HNH endonuclease	A0A291AUJ4	Sinorhizobium_phage	1.7e-43	65.0
WP_037421902.1\|1427723_1428242_-	hypothetical protein	A0A291AUJ2	Sinorhizobium_phage	9.2e-24	41.8
WP_037421905.1\|1428238_1428670_-	DUF4326 domain-containing protein	A0A068CH91	Rhizobium_phage	6.9e-41	57.9
WP_037421908.1\|1428666_1428975_-	hypothetical protein	NA	NA	NA	NA
WP_037421911.1\|1428971_1429970_-	phage Gp37/Gp68 family protein	A0A291AUR0	Sinorhizobium_phage	3.6e-117	56.6
WP_037421913.1\|1429962_1430208_-	hypothetical protein	NA	NA	NA	NA
WP_050988293.1\|1430200_1430806_-	hypothetical protein	A0A291AUC8	Sinorhizobium_phage	1.1e-95	84.9
WP_050988310.1\|1430798_1430996_-	hypothetical protein	A0A291AUC9	Sinorhizobium_phage	1.8e-12	64.2
WP_037421918.1\|1431022_1431313_-	hypothetical protein	NA	NA	NA	NA
WP_037421921.1\|1431305_1431572_-	hypothetical protein	NA	NA	NA	NA
WP_037421924.1\|1431568_1432183_-	hypothetical protein	NA	NA	NA	NA
WP_037421927.1\|1432175_1432367_-	hypothetical protein	B4UTY3	Rhizobium_phage	8.6e-12	55.9
WP_037421930.1\|1432360_1432723_-	hypothetical protein	NA	NA	NA	NA
WP_157213182.1\|1432712_1433492_-	hypothetical protein	L7TKP8	Pseudomonas_virus	4.6e-19	53.3
WP_037421936.1\|1433488_1433794_-	hypothetical protein	A0A291AUJ8	Sinorhizobium_phage	2.8e-12	41.8
WP_037421939.1\|1433793_1434003_-	hypothetical protein	NA	NA	NA	NA
WP_037422219.1\|1434014_1434266_-	hypothetical protein	NA	NA	NA	NA
WP_086022765.1\|1434262_1434436_-	hypothetical protein	NA	NA	NA	NA
WP_083854167.1\|1434769_1435024_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_157213183.1\|1435189_1435438_+	hypothetical protein	NA	NA	NA	NA
WP_050988296.1\|1435395_1435782_-	hypothetical protein	NA	NA	NA	NA
WP_162109134.1\|1435775_1436231_-	hypothetical protein	NA	NA	NA	NA
WP_037421941.1\|1436348_1436846_+	hypothetical protein	A0A291AUJ7	Sinorhizobium_phage	3.0e-72	88.8
WP_050988298.1\|1436845_1437088_+	hypothetical protein	NA	NA	NA	NA
WP_172900172.1\|1437087_1437240_+	hypothetical protein	A0A291AUK4	Sinorhizobium_phage	2.0e-11	75.0
WP_157213184.1\|1437282_1438134_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_172900173.1\|1438133_1438493_+	DUF2312 domain-containing protein	Q8W6H2	Sinorhizobium_phage	9.9e-25	65.5
WP_083854154.1\|1438485_1441131_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_037421944.1\|1441127_1442255_+	hypothetical protein	B4UTW9	Rhizobium_phage	5.7e-26	31.7
WP_037421946.1\|1442251_1442554_+	hypothetical protein	A0A291AUT2	Sinorhizobium_phage	8.6e-22	64.8
WP_037421949.1\|1442553_1442826_+	hypothetical protein	A0A0B5A2H1	Paracoccus_phage	1.6e-11	45.9
WP_037421952.1\|1444164_1444812_+	antitermination protein NusG	A0A291AUL3	Sinorhizobium_phage	8.7e-80	69.2
WP_037422247.1\|1445168_1445531_+	HNH endonuclease	I3ULZ4	Rhodobacter_phage	1.4e-34	59.7
WP_037421955.1\|1445532_1445730_+	hypothetical protein	NA	NA	NA	NA
WP_037421958.1\|1445813_1446305_+	hypothetical protein	I3ULZ5	Rhodobacter_phage	7.4e-31	46.8
WP_037421960.1\|1446288_1447995_+\|terminase	terminase large subunit	I3ULZ6	Rhodobacter_phage	2.2e-191	61.0
WP_037421963.1\|1448008_1449286_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	2.0e-56	37.5
WP_037421966.1\|1449358_1450216_+\|protease	ATP-dependent Clp protease proteolytic subunit	H2BDA9	Pseudomonas_virus	4.0e-64	51.5
WP_086022774.1\|1450361_1451642_+\|capsid	phage major capsid protein	A0A141GEW2	Brucella_phage	1.2e-83	42.7
WP_037421969.1\|1451721_1452162_+	hypothetical protein	NA	NA	NA	NA
WP_037421972.1\|1452229_1452721_+	hypothetical protein	NA	NA	NA	NA
WP_050988301.1\|1453222_1453810_+\|head,tail	phage head-tail connector protein	A0A141GEW4	Brucella_phage	1.1e-44	45.3
WP_037421975.1\|1453834_1454332_+	hypothetical protein	NA	NA	NA	NA
WP_037421978.1\|1454335_1454680_+\|head,tail	head-tail adaptor protein	B4UTP9	Rhizobium_phage	3.7e-13	37.8
WP_037421981.1\|1454679_1455111_+	HK97 gp10 family phage protein	A0A141GEW6	Brucella_phage	3.8e-31	53.3
WP_037421984.1\|1455107_1455518_+	DUF3168 domain-containing protein	B4UTQ1	Rhizobium_phage	1.5e-32	55.2
WP_037421987.1\|1455517_1455718_+	hypothetical protein	NA	NA	NA	NA
WP_037421990.1\|1455786_1456242_+	hypothetical protein	A0A141GEW9	Brucella_phage	4.9e-37	52.3
WP_037421991.1\|1456241_1456670_+	gene transfer agent family protein	A0A141GEX0	Brucella_phage	1.1e-43	70.1
WP_037421994.1\|1456788_1459038_+	tape measure domain-containing protein	A0A141GEX2	Brucella_phage	6.0e-43	29.8
WP_037421996.1\|1459030_1459744_+	hypothetical protein	B4UTQ7	Rhizobium_phage	4.6e-106	78.1
WP_037421999.1\|1459743_1460316_+	hypothetical protein	B4UTQ9	Rhizobium_phage	4.0e-52	53.7
WP_162109137.1\|1460321_1460717_+	hypothetical protein	B4UTR0	Rhizobium_phage	8.6e-38	59.8
WP_037422002.1\|1460724_1462761_+	hypothetical protein	B4UTR1	Rhizobium_phage	4.5e-239	61.0
WP_162109139.1\|1462832_1465760_+	hypothetical protein	B4UTR2	Rhizobium_phage	1.9e-97	67.3

DBSCAN-SWA_3

1933123 : 1949724

Sulfitobacter_phage(53.85%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037423522.1\|1933123_1933942_-	membrane protein	L7TLM2	Rhizobium_phage	6.8e-21	34.7
WP_083854226.1\|1934272_1935115_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_037423520.1\|1936274_1936745_-	hypothetical protein	A0A0F6R5Y6	Sinorhizobium_phage	4.7e-27	40.7
WP_037423517.1\|1936744_1937959_-	hypothetical protein	A0A1Y0SVH2	Sinorhizobium_phage	2.8e-55	51.8
WP_037423514.1\|1938049_1939399_-\|tail	tail fiber domain-containing protein	M4NM77	Sulfitobacter_phage	9.7e-41	32.4
WP_037423512.1\|1939406_1939853_-	GNAT family N-acetyltransferase	X2CY06	Brucella_phage	9.7e-38	53.6
WP_050988335.1\|1939849_1941478_-	hypothetical protein	A0A088F6U1	Sulfitobacter_phage	1.8e-81	39.2
WP_095677966.1\|1941474_1942077_-	hypothetical protein	A0A088FAT4	Sulfitobacter_phage	8.0e-19	34.0
WP_037423472.1\|1942073_1942670_-	hypothetical protein	A0A088F6W5	Sulfitobacter_phage	1.7e-21	35.4
WP_037423469.1\|1942666_1942990_-	hypothetical protein	F8TUS1	EBPR_podovirus	9.2e-22	47.7
WP_172900177.1\|1942986_1943163_-	hypothetical protein	NA	NA	NA	NA
WP_037423468.1\|1943229_1944225_-	DUF5309 domain-containing protein	A0A088FAT7	Sulfitobacter_phage	1.1e-129	71.6
WP_037423465.1\|1944372_1945317_-	hypothetical protein	A0A088F6W8	Sulfitobacter_phage	1.2e-29	34.6
WP_037423463.1\|1945474_1945711_-	hypothetical protein	NA	NA	NA	NA
WP_037423460.1\|1946239_1948294_-	hypothetical protein	A0A088F830	Sulfitobacter_phage	4.3e-197	57.8
WP_037423457.1\|1948293_1949724_-	DNA packaging protein	C8CLI4	Xylella_phage	4.0e-170	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023065

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023063

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection