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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023183 Bacillus cereus strain CC-1 plasmid p4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP023179 Bacillus cereus strain CC-1 chromosome, complete genome 7 crisprs cas3,csa3,WYL,cas14j,RT,DinG,DEDDh,cas14k,c2c9_V-U4 4 1 4 0
NZ_CP023181 Bacillus cereus strain CC-1 plasmid p2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP023182 Bacillus cereus strain CC-1 plasmid p3, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP023180 Bacillus cereus strain CC-1 plasmid p1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP023179
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_1 333590-333669 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_2 1284500-1284734 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_4 2218125-2218232 TypeV-U4 NA
2 spacers
c2c9_V-U4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_3 2217747-2218023 TypeV-U4 NA
5 spacers
c2c9_V-U4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_5 2872722-2872835 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_6 4695696-4695782 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023179_7 4794937-4795044 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP023179_2 2.3|1284693|17|NZ_CP023179|CRISPRCasFinder 1284693-1284709 17 NZ_CP023179.1 3144081-3144097 1 0.941
NZ_CP023179_3 3.1|2217771|18|NZ_CP023179|CRISPRCasFinder 2217771-2217788 18 NZ_CP023179.1 2217729-2217746 1 0.944
NZ_CP023179_3 3.1|2217771|18|NZ_CP023179|CRISPRCasFinder 2217771-2217788 18 NZ_CP023179.1 2603217-2603234 1 0.944
NZ_CP023179_3 3.4|2217897|18|NZ_CP023179|CRISPRCasFinder 2217897-2217914 18 NZ_CP023179.1 610598-610615 1 0.944
NZ_CP023179_4 4.2|2218191|18|NZ_CP023179|CRISPRCasFinder 2218191-2218208 18 NZ_CP023179.1 1862530-1862547 1 0.944

1. spacer 2.3|1284693|17|NZ_CP023179|CRISPRCasFinder matches to position: 3144081-3144097, mismatch: 1, identity: 0.941

aaagaaccttttgcatg	CRISPR spacer
aaaggaccttttgcatg	Protospacer
****.************

2. spacer 3.1|2217771|18|NZ_CP023179|CRISPRCasFinder matches to position: 2217729-2217746, mismatch: 1, identity: 0.944

attagcagcgggatttgc	CRISPR spacer
attagcagagggatttgc	Protospacer
******** *********

3. spacer 3.1|2217771|18|NZ_CP023179|CRISPRCasFinder matches to position: 2603217-2603234, mismatch: 1, identity: 0.944

attagcagcgggatttgc	CRISPR spacer
attagtagcgggatttgc	Protospacer
*****.************

4. spacer 3.4|2217897|18|NZ_CP023179|CRISPRCasFinder matches to position: 610598-610615, mismatch: 1, identity: 0.944

aacagcaattgggtttgc	CRISPR spacer
aacagcaattggatttgc	Protospacer
************.*****

5. spacer 4.2|2218191|18|NZ_CP023179|CRISPRCasFinder matches to position: 1862530-1862547, mismatch: 1, identity: 0.944

aatagcaaatgcaaatta	CRISPR spacer
aaaagcaaatgcaaatta	Protospacer
** ***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP023179_1 1.1|333615|30|NZ_CP023179|CRISPRCasFinder 333615-333644 30 MN270892 Pectobacterium phage Wc4-1, complete genome 77784-77813 8 0.733
NZ_CP023179_1 1.1|333615|30|NZ_CP023179|CRISPRCasFinder 333615-333644 30 MN270891 Pectobacterium phage Wc4, complete genome 77784-77813 8 0.733

1. spacer 1.1|333615|30|NZ_CP023179|CRISPRCasFinder matches to MN270892 (Pectobacterium phage Wc4-1, complete genome) position: , mismatch: 8, identity: 0.733

gaagtttaaaaagtccggttaagataacct	CRISPR spacer
actgtttaaaaagttcggttaagagttcgt	Protospacer
.  ***********.*********   * *

2. spacer 1.1|333615|30|NZ_CP023179|CRISPRCasFinder matches to MN270891 (Pectobacterium phage Wc4, complete genome) position: , mismatch: 8, identity: 0.733

gaagtttaaaaagtccggttaagataacct	CRISPR spacer
actgtttaaaaagttcggttaagagttcgt	Protospacer
.  ***********.*********   * *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 270869 : 278816 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_2 323520 : 331892 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 868106 : 878501 9 Bacillus_phage(75.0%) holin NA
DBSCAN-SWA_4 3302467 : 3311185 7 Bacillus_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage