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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023347 Escherichia coli strain ETEC-2265 plasmid unnamed1, complete sequence 0 crisprs RT,cas14i 0 0 3 0
NZ_CP023346 Escherichia coli strain ETEC-2265 chromosome, complete genome 5 crisprs DinG,cas3,c2c9_V-U4,DEDDh,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e 0 12 17 0
NZ_CP023348 Escherichia coli strain ETEC-2265 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP023347
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3867 : 51423 53 Stx2-converting_phage(29.41%) transposase,protease NA
DBSCAN-SWA_2 54879 : 122492 58 Stx2-converting_phage(40.0%) integrase,transposase attL 90625:90684|attR 114983:116937
DBSCAN-SWA_3 131236 : 137583 8 Stx2-converting_phage(50.0%) integrase,transposase attL 118520:118534|attR 139627:139641

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP023346
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023346_1 45373-45504 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023346_2 578779-578875 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023346_3 818301-818446 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023346_4 3119491-3119824 TypeI-E I-E
5 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023346_5 3145669-3146185 Unclear I-E
8 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP023346_1 1.1|45390|40|NZ_CP023346|PILER-CR 45390-45429 40 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141028-141067 0 1.0
NZ_CP023346_1 1.2|45447|42|NZ_CP023346|PILER-CR 45447-45488 42 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 141085-141126 0 1.0
NZ_CP023346_4 4.1|3119518|34|NZ_CP023346|CRT 3119518-3119551 34 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246970 3 0.912
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 39364-39395 5 0.844
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP044424 Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence 99-130 6 0.812
NZ_CP023346_5 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT 3145698-3145729 32 KR080197 Mycobacterium phage FlagStaff, complete genome 15476-15507 7 0.781
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_LR134463 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence 97059-97090 7 0.781
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP021083 Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence 362913-362944 7 0.781
NZ_CP023346_4 4.7|3119642|32|NZ_CP023346|CRISPRCasFinder,PILER-CR 3119642-3119673 32 MK448454 Streptococcus satellite phage Javan361, complete genome 9192-9223 8 0.75
NZ_CP023346_4 4.9|3119764|32|NZ_CP023346|CRISPRCasFinder,PILER-CR 3119764-3119795 32 NZ_CP006991 Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence 532343-532374 8 0.75
NZ_CP023346_5 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT 3145698-3145729 32 NZ_CP014600 Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence 15418-15449 8 0.75
NZ_CP023346_5 5.2|3145759|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145759-3145790 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 376196-376227 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 MH155873 Microbacterium phage Paschalis, complete genome 25033-25064 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 546692-546723 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_LR134465 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence 202063-202094 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 86816-86847 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 570824-570855 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NC_016623 Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence 500613-500644 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP040820 Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence 162469-162500 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP029356 Azospirillum sp. CFH 70021 plasmid unnamed1 89306-89337 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 638043-638074 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP032340 Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence 1365174-1365205 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 124144-124175 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 496002-496033 8 0.75
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP012915 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence 767196-767227 8 0.75
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_KY433363 Proteus mirabilis strain R997 plasmid pR997, complete sequence 57742-57773 8 0.75
NZ_CP023346_5 5.8|3146125|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3146125-3146156 32 MK972713 Salmonella phage SW5, complete genome 18872-18903 8 0.75
NZ_CP023346_5 5.8|3146125|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3146125-3146156 32 MK972714 Salmonella phage SW3, complete genome 19094-19125 8 0.75
NZ_CP023346_5 5.8|3146125|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3146125-3146156 32 NC_049460 Salmonella phage SI7, complete genome 9314-9345 8 0.75
NZ_CP023346_4 4.5|3119762|34|NZ_CP023346|CRT 3119762-3119795 34 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35773 9 0.735
NZ_CP023346_4 4.9|3119764|32|NZ_CP023346|CRISPRCasFinder,PILER-CR 3119764-3119795 32 NZ_CP040723 Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence 35740-35771 9 0.719
NZ_CP023346_5 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT 3145698-3145729 32 NZ_CP009292 Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence 139210-139241 9 0.719
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP030828 Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence 447780-447811 9 0.719
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 335975-336006 9 0.719
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 AP021850 Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome 207494-207525 9 0.719
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 226955-226986 9 0.719
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 NZ_CP014519 Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence 62779-62810 9 0.719
NZ_CP023346_5 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145820-3145851 32 MH834603 Arthrobacter phage Bridgette, complete genome 29555-29586 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_KX528687 Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.1, complete sequence 60757-60788 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP031977 Acinetobacter haemolyticus strain AN43 plasmid pAhaemAN43b, complete sequence 41217-41248 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP018638 Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-1, complete sequence 697-728 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP031973 Acinetobacter haemolyticus strain AN59 plasmid pAhaemAN59c, complete sequence 41217-41248 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP045203 Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence 184766-184797 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP021429 Acinetobacter pittii strain HUMV-6483 plasmid p11, complete sequence 54225-54256 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP040913 Acinetobacter pittii strain AB17H194 plasmid pAB17H194-2, complete sequence 46038-46069 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP030755 Acinetobacter schindleri strain H3 plasmid unnamed1, complete sequence 51662-51693 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 CP033526 Acinetobacter pittii strain 2014N05-125 plasmid p2014N05-125-1, complete sequence 26822-26853 9 0.719
NZ_CP023346_5 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3145942-3145973 32 NZ_CP025619 Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122, complete sequence 145953-145984 9 0.719
NZ_CP023346_5 5.6|3146003|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR 3146003-3146034 32 NZ_CP030864 Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence 52197-52228 9 0.719
NZ_CP023346_5 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT 3145698-3145729 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688
NZ_CP023346_4 4.1|3119518|34|NZ_CP023346|CRT 3119518-3119551 34 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 141276-141309 11 0.676

1. spacer 1.1|45390|40|NZ_CP023346|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0 

ccataaagcaatattgaaaatttcttttttctacgccatg	CRISPR spacer
ccataaagcaatattgaaaatttcttttttctacgccatg	Protospacer
****************************************

2. spacer 1.2|45447|42|NZ_CP023346|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0 

gaacttaacaatattgaaagttggatttatctgcgtgtgaca	CRISPR spacer
gaacttaacaatattgaaagttggatttatctgcgtgtgaca	Protospacer
******************************************

3. spacer 4.1|3119518|34|NZ_CP023346|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.912 

tctaagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
tccaagtgatgtccatcatcgcatccagtgcgtc	Protospacer
**.*******.*********************.*

4. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 5, identity: 0.844 

gatcctgaacgacgccgcgcccaccgcaccga--	CRISPR spacer
catcctgagcgacgccgcgctcaccg--ccgact	Protospacer
 *******.***********.*****  ****

5. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044424 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence) position: , mismatch: 6, identity: 0.812 

gatcctgaacgacgccgcgcccaccg-caccga	CRISPR spacer
catcctgaacgacgccgagaccaccgacgacg-	Protospacer
 **************** * ****** *. **

6. spacer 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781 

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
aacccggcgaacggcatcgcggcgccggcgtc	Protospacer
*** . * .****** ******** *******

7. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134463 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence) position: , mismatch: 7, identity: 0.781 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
gctcctggacgaggccgcgcccaccgtcgcca	Protospacer
* *****.**** *************.  * *

8. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 7, identity: 0.781 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
gttcgagaacgacgccgcgcccgccggactgg	Protospacer
* **  ****************.*** **.*.

9. spacer 4.7|3119642|32|NZ_CP023346|CRISPRCasFinder,PILER-CR matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 8, identity: 0.75 

tgaagcatcaaacatttggtggaccaaacgga	CRISPR spacer
tgaagaatcaaaaatttggtggattgataaga	Protospacer
***** ****** **********...*  .**

10. spacer 4.9|3119764|32|NZ_CP023346|CRISPRCasFinder,PILER-CR matches to NZ_CP006991 (Rhizobium sp. IE4771 plasmid pRetIE4771e, complete sequence) position: , mismatch: 8, identity: 0.75 

ggatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
ggatcggccagcgcatctgcgggaggatgatg	Protospacer
***** ******** ********. *.*.*

11. spacer 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75 

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
ggctgtggaaagggctgcgcggcggcggcgac	Protospacer
..*  .***** **** ************* *

12. spacer 5.2|3145759|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75 

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

13. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

14. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to MH155873 (Microbacterium phage Paschalis, complete genome) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cgaccgatacgacgccgcgcccaccgcggcga	Protospacer
 . ** . *******************. ***

15. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgccctgt	Protospacer
  * *************** ***.*** *.*

16. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
caccgacaacgaggccgcgcccagcgcaccca	Protospacer
 *.*   ***** ********** ****** *

17. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cttgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

18. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgccctgt	Protospacer
  * *************** ***.*** *.*

19. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgccctgt	Protospacer
  * *************** ***.*** *.*

20. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

21. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

22. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgccctgt	Protospacer
  * *************** ***.*** *.*

23. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

24. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

25. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

26. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 8, identity: 0.75 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cctgctgaacgacgccgcggccatcgcgctgt	Protospacer
  * *************** ***.***.*.*

27. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY433363 (Proteus mirabilis strain R997 plasmid pR997, complete sequence) position: , mismatch: 8, identity: 0.75 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgatggag	Protospacer
*** *********** ******** .*   *

28. spacer 5.8|3146125|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to MK972713 (Salmonella phage SW5, complete genome) position: , mismatch: 8, identity: 0.75 

atcgctgctgcttttcactcagtgtcatttgt	CRISPR spacer
aaagttgctgtttttcactcagtttcattgcg	Protospacer
*  *.*****.************ *****

29. spacer 5.8|3146125|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to MK972714 (Salmonella phage SW3, complete genome) position: , mismatch: 8, identity: 0.75 

atcgctgctgcttttcactcagtgtcatttgt	CRISPR spacer
aaagttgctgtttttcactcagtttcattgcg	Protospacer
*  *.*****.************ *****

30. spacer 5.8|3146125|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NC_049460 (Salmonella phage SI7, complete genome) position: , mismatch: 8, identity: 0.75 

atcgctgctgcttttcactcagtgtcatttgt	CRISPR spacer
aaagttgctgtttttcactcagtttcattgcg	Protospacer
*  *.*****.************ *****

31. spacer 4.5|3119762|34|NZ_CP023346|CRT matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.735 

acggat-ctgccagcgcctctgcggggcggtaaac	CRISPR spacer
-cggtcgctgccagcgcctcggcgaggcggtctcg	Protospacer
 *** . ************* ***.******

32. spacer 4.9|3119764|32|NZ_CP023346|CRISPRCasFinder,PILER-CR matches to NZ_CP040723 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719 

ggatctgccagcgcctctgcggggcggtaaac	CRISPR spacer
gtcgctgccagcgcctcggcgaggcggtctcg	Protospacer
*   ************* ***.******

33. spacer 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719 

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
cccgggaaaaacgggttcgcggcggcggcttc	Protospacer
  *.  ..****** ************** **

34. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 9, identity: 0.719 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
atgatagagcgacgacgcgcccaccgcaccgc	Protospacer
.   . **.***** ****************

35. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.719 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
gtccgccgccgccgccgcgcacaccgcaccga	Protospacer
* .* . . ** ******** ***********

36. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 9, identity: 0.719 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cttcctgcaggacgccgcgcccaccacgacct	Protospacer
  ***** * ***************.*. *

37. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 9, identity: 0.719 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
agtcaccaacgacgccgcgccgcccgcacccc	Protospacer
..** . **************  *******

38. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014519 (Sinomonas atrocyanea strain KCTC 3377 plasmid pSA01, complete sequence) position: , mismatch: 9, identity: 0.719 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
tcccatgaacgacggcgcgcccacggcattgc	Protospacer
  .* ********* ********* ***..*

39. spacer 5.3|3145820|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to MH834603 (Arthrobacter phage Bridgette, complete genome) position: , mismatch: 9, identity: 0.719 

gatcctgaacgacgccgcgcccaccgcaccga	CRISPR spacer
cggccccctcgacgccgcgcccaccgaagcga	Protospacer
 . **.   ***************** * ***

40. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX528687 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

41. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031977 (Acinetobacter haemolyticus strain AN43 plasmid pAhaemAN43b, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

42. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018638 (Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

43. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031973 (Acinetobacter haemolyticus strain AN59 plasmid pAhaemAN59c, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

44. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045203 (Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggcg	Protospacer
*** *********** ******** .*

45. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021429 (Acinetobacter pittii strain HUMV-6483 plasmid p11, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

46. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040913 (Acinetobacter pittii strain AB17H194 plasmid pAB17H194-2, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

47. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030755 (Acinetobacter schindleri strain H3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

48. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to CP033526 (Acinetobacter pittii strain 2014N05-125 plasmid p2014N05-125-1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggtg	Protospacer
*** *********** ******** .*

49. spacer 5.5|3145942|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025619 (Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaacgccggttgaacgtcgtgcaaaaatcat	CRISPR spacer
gaaccgccggttgaaggtcgtgcatgacggcg	Protospacer
*** *********** ******** .*

50. spacer 5.6|3146003|32|NZ_CP023346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

gactggtacggcccgtgggagcgtgtgatcgg	CRISPR spacer
gactggtccggccggtgggagcggctgccgaa	Protospacer
******* ***** *********  ** . ..

51. spacer 5.1|3145698|32|NZ_CP023346|CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688 

aacatcggaaacggcttcgcggcggcggcgtc	CRISPR spacer
gaggacggaagcggcttcgccgcggcgggcaa	Protospacer
.* . *****.********* *******

52. spacer 4.1|3119518|34|NZ_CP023346|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 11, identity: 0.676 

tctaagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
gactcatcgcatccatcatcggttccagtgcgcc	Protospacer
  .  .* ..***********  ***********

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 197159 : 260767 54 Stx2-converting_phage(27.27%) plate,protease,tRNA,transposase NA
DBSCAN-SWA_2 306065 : 319779 14 Enterobacteria_phage(88.89%) integrase attL 295655:295668|attR 310667:310680
DBSCAN-SWA_3 819923 : 868969 64 Enterobacteria_phage(52.46%) head,lysis,protease,terminase,capsid,portal,tail,integrase,transposase attL 811869:811885|attR 860882:860898
DBSCAN-SWA_4 1249579 : 1307191 67 Enterobacteria_phage(51.02%) protease,holin,portal,tail,tRNA,integrase,transposase attL 1248191:1248206|attR 1268009:1268024
DBSCAN-SWA_5 1406506 : 1470123 75 Escherichia_phage(35.42%) head,protease,holin,terminase,capsid,portal,tail,integrase,transposase attL 1412366:1412393|attR 1456318:1456345
DBSCAN-SWA_6 1761322 : 1817849 64 Escherichia_phage(33.96%) head,holin,terminase,capsid,portal,tail,integrase,transposase attL 1813005:1813018|attR 1816234:1816247
DBSCAN-SWA_7 2272202 : 2282280 15 Stx2-converting_phage(40.0%) transposase NA
DBSCAN-SWA_8 2316226 : 2438987 119 Escherichia_phage(32.26%) head,lysis,holin,terminase,capsid,portal,tail,tRNA,plate,integrase,transposase attL 2378025:2378051|attR 2411711:2411737
DBSCAN-SWA_9 2451510 : 2460952 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_10 2921139 : 3007552 93 Salmonella_phage(69.81%) head,lysis,terminase,capsid,portal,tail,tRNA,plate,integrase,transposase attL 2982929:2982943|attR 3013644:3013658
DBSCAN-SWA_11 3094430 : 3103196 7 Escherichia_phage(71.43%) integrase attL 3091155:3091168|attR 3096853:3096866
DBSCAN-SWA_12 3399521 : 3405232 9 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_13 3931996 : 3970791 34 Stx2-converting_phage(44.44%) transposase NA
DBSCAN-SWA_14 4179507 : 4189584 11 Enterobacteria_phage(100.0%) integrase attL 4179325:4179347|attR 4190060:4190082
DBSCAN-SWA_15 4439029 : 4518562 89 Escherichia_phage(38.64%) head,lysis,holin,protease,terminase,capsid,portal,tail,tRNA,plate,integrase,transposase attL 4432237:4432254|attR 4520138:4520155
DBSCAN-SWA_16 4848448 : 4907700 60 Escherichia_phage(26.67%) integrase,transposase attL 4867370:4867390|attR 4914913:4914933
DBSCAN-SWA_17 5011360 : 5052923 49 Enterobacteria_phage(43.75%) protease,lysis,terminase,portal,tail,integrase attL 5003901:5003916|attR 5029259:5029274

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP023348
Click the left colored region to show detailed information

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 39307 : 84959 54 Stx2-converting_phage(42.86%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage