CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP019488	Sinorhizobium meliloti strain B399 chromosome, complete genome	3 crisprs	WYL,cas3,csa3	0	4
NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	1 crisprs	NA	1	1
NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	2 crisprs	RT,csa3	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019488_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019488_1

173737-173883

Orphan

Consensus_repeat	Method
TCTCCCCGCATGCGGGGAGAAGGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP019488_1

>merge|NZ_CP019488|1|173737-173883|CRISPRCasFinder
TCTCCCCGCATGCGGGGAGAAGGGAATCGCGGGTTCGCCTTCGCACCATCTCCACACGCAGGCGCGCCGTGGCGTACGTCCCCTCTCCCCGCATGCGGGGAGAGGGTTAGGGTGAGGGGCGGTCGTCCCCGCGCGCGGGGAGAAGGT

>NZ_CP019488|1|1|173737-173883|CRISPRCasFinder
TCTCCCCGCATGCGGGGAGAAGGG	AATCGCGGGTTCGCCTTCGCACCATCTCCACACGCAGGCGCGCCGTGGCGTACGTCCCC
TCTCCCCGCATGCGGGGAGAGGGT	TAGGGTGAGGGGCGGT
CGTCCCCGCGCGCGGGGAGAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019488.1\|WP_010968386.1\|167418_168402_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224975
NZ_CP019488.1\|WP_010968385.1\|166400_167411_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|227300
NZ_CP019488.1\|WP_003531958.1\|177653_178736_-\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|226642
NZ_CP019488.1\|WP_003537933.1\|168630_169794_+\|IS4-like-element-ISRm16-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP019488.1\|WP_010968389.1\|172822_173677_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP019488.1\|WP_010968393.1\|182697_183717_+\|glucokinase	unknown	unknown	gnl\|CDD\|234716
NZ_CP019488.1\|WP_014529988.1\|162773_163502_+\|pilus-assembly-protein-CpaD	unknown	unknown	gnl\|CDD\|227748
NZ_CP019488.1\|WP_010968383.1\|163524_164811_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|227298
NZ_CP019488.1\|WP_010968384.1\|164941_166342_+\|CpaF-family-protein	unknown	unknown	gnl\|CDD\|227297
NZ_CP019488.1\|WP_003537743.1\|172469_172814_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP019488.1\|WP_010968390.1\|173913_174873_-\|glyoxylate/hydroxypyruvate-reductase-A	unknown	unknown	gnl\|CDD\|240641
NZ_CP019488.1\|WP_095919847.1\|176520_177654_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226690
NZ_CP019488.1\|WP_010968391.1\|174883_176512_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226641
NZ_CP019488.1\|WP_010968387.1\|170050_170860_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227343
NZ_CP019488.1\|WP_010968394.1\|183825_185631_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP019488.1\|WP_010968395.1\|185648_186467_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP019488.1\|WP_010968392.1\|181067_182135_+\|penicillin-insensitive-murein-endopeptidase	unknown	unknown	gnl\|CDD\|226293
NZ_CP019488.1\|WP_003531957.1\|178916_180776_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP019488.1\|WP_010968388.1\|170990_172382_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|223338
NZ_CP019488.1\|WP_003531955.1\|182255_182636_+\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|224716

Protein	Function_ID	Function_description	E-value
NZ_CP019488.1\|WP_010968386.1\|167418_168402_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	7.10359e-56
NZ_CP019488.1\|WP_010968385.1\|166400_167411_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	3.38407e-115
NZ_CP019488.1\|WP_003531958.1\|177653_178736_-\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP019488.1\|WP_003537933.1\|168630_169794_+\|IS4-like-element-ISRm16-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.69173e-26
NZ_CP019488.1\|WP_010968389.1\|172822_173677_+\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.21182e-26
NZ_CP019488.1\|WP_010968393.1\|182697_183717_+\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	7.38484e-165
NZ_CP019488.1\|WP_014529988.1\|162773_163502_+\|pilus-assembly-protein-CpaD	gnl\|CDD\|227748	COG5461, COG5461, Type IV pili component [Cell motility and secretion].	3.19225e-111
NZ_CP019488.1\|WP_010968383.1\|163524_164811_+\|transcriptional-regulator	gnl\|CDD\|227298	COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion].	6.1818e-120
NZ_CP019488.1\|WP_010968384.1\|164941_166342_+\|CpaF-family-protein	gnl\|CDD\|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	0
NZ_CP019488.1\|WP_003537743.1\|172469_172814_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.39809e-11
NZ_CP019488.1\|WP_010968390.1\|173913_174873_-\|glyoxylate/hydroxypyruvate-reductase-A	gnl\|CDD\|240641	cd12164, GDH_like_2, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family. This group contains a variety of proteins variously identified as glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase) and other enzymes of the 2-hydroxyacid dehydrogenase family. GDH catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. 2-hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.07536e-138
NZ_CP019488.1\|WP_095919847.1\|176520_177654_-\|ABC-transporter-permease	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP019488.1\|WP_010968391.1\|174883_176512_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226641	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only].	0
NZ_CP019488.1\|WP_010968387.1\|170050_170860_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|227343	COG5010, TadD, Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].	1.63751e-80
NZ_CP019488.1\|WP_010968394.1\|183825_185631_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP019488.1\|WP_010968395.1\|185648_186467_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.01351e-123
NZ_CP019488.1\|WP_010968392.1\|181067_182135_+\|penicillin-insensitive-murein-endopeptidase	gnl\|CDD\|226293	COG3770, MepA, Murein endopeptidase [Cell envelope biogenesis, outer membrane].	5.68793e-158
NZ_CP019488.1\|WP_003531957.1\|178916_180776_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP019488.1\|WP_010968388.1\|170990_172382_+\|aminopeptidase	gnl\|CDD\|223338	COG0260, PepB, Leucyl aminopeptidase [Amino acid transport and metabolism].	0
NZ_CP019488.1\|WP_003531955.1\|182255_182636_+\|methylglyoxal-synthase	gnl\|CDD\|224716	COG1803, MgsA, Methylglyoxal synthase [Carbohydrate transport and metabolism].	2.60323e-72

>NZ_CP019488.1|WP_010968389.1|172822_173677_+|C40-family-peptidase
MPEVLDRRLNAYREDIAEARLRGLVEAKRFVEGTPAAVSVPVTPLRARPEAGCGTDTELLYGETVRVLDVADGWAWVRSDLDGYVGYVPENVVQPPQAPATHLVAVPRTFVYRGADLRFPQAFALSMGSRIAVVGEAETRGTRYFLLDGGLAIVADHCIPAAGALTEDYVAIAARFLETPYLWGGRSGFGIDCSGLVQLAMQMAGRNAPRDSDMQASGLGRAIEREELTRGDLVFWKGHVAIMEDEKTLLHANGHTMTVAREGLEDAIRRIGWLYAQPTGYRRP
>NZ_CP019488.1|WP_003537743.1|172469_172814_+|winged-helix-turn-helix-transcriptional-regulator
MPVELTPSQALGLWHAVSLEQVRVDSRDLTLRQMAILLQIYLVPPPHTVRGLAASLGVTKPVITRALDTMGALGLVDRIRDERDRRNVIIKRTVEGALYLEKFGDLIINQGRKM
>NZ_CP019488.1|WP_010968388.1|170990_172382_+|aminopeptidase
MAPFQFIERQSPFNTSNGKTLPIFAVTPAHIETGSIDPIALDWAKKAGFKAESGAVLLIPSADGHLGGALFGLGANPSDEPFLTGKLARALPAGKWHIETAPLTANRLALGYGLGSYRFERYKSAKTDAPTLLIPADSDATDIKRQLAGVFLARDLINTPTNDMGPEALEAAFRALAAHYKADVSVISGEALLTENFPLVHTVGRASAEAPRLLEMRWGRKGHRKVTLVGKGVCFDTGGLDIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENSISANAFRPGDIYKSRKGLTVQIDNTDAEGRLILADALAYADEEKTDLVVDMATLTGAARVALGPDLPPFFTDDDDLARDLAEASLTVDDPVWRMPLYRGYDKDVSARIADLTNAPSGGMAGSITAALFLKRFVTNAKSWVHFDIFGWAQSERPHSPIGGEAQAIRALYHHIGRIAG
>NZ_CP019488.1|WP_010968387.1|170050_170860_-|tetratricopeptide-repeat-protein
MTMQDNFSFSLRRLATGVAVAMVALSLSACAGQQGRKELTTGSIPKLTRPVQSMNATELAAAAERIGQAYERNPKDREAGLNYANLLRMTGRNEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLKSAEGAILDQLGRSAEARLRYREALDLKPNEPSVLSNLGMSYLLTKDLRTAETYLKSAASQPDAGSSVRQNLALAVGLQGRFQEAETIAGQELTSEQAEANVAYLRSVLSQQGAWKQLAKAD
>NZ_CP019488.1|WP_003537933.1|168630_169794_+|IS4-like-element-ISRm16-family-transposase
MRFTPSIFAQLLKAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVALIYAQLSATTSLRGLEASFNANSQHHYHLGSGRLMRSTLSDANRRRPVAVFAETFALLAGQLDRQTRREGTKMLRLIDSTPIPLGKLYDWAKSNGRIRGMKLHVVYDPKADCPGILDITDANVNDAQIGRTITIEKGATYVFDKGYCHYGWWTAIAEAGASFVTRPKTNMGLALVAERPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTNDLERSAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAARLARVPLPILRFTDLVTQCLFQRKSIAEIHKPPQVNPSRPKPRTIPNQMVFRYA
>NZ_CP019488.1|WP_010968386.1|167418_168402_+|type-II-secretion-system-F-family-protein
MAGWIETLTDPNILVAALVSMAVLATFYSLVAPLLERGDLAKRMKSVATEREQIRARERARLNAEATTGRASLRAQHNTSVREIVERLNLRKALVDDNTVNRLKTAGYRSQNALNTFLFARFCLPFLFLTVAVLYIFVLGNFADKPIMVRVSFAIGFAYVGFYAPNIFIANAISKRQQSIRRAWPDALDLLLICVESGVSMELAMRRVADEIAVQSPPLAEELVLTTAELSFLPERRIALENLGLRTGLDEVKSVTQALIQADRYGTPVAQALRVLAQESRDQRMTAAEKKAAALPPKLTVPMILFFLPVLVAVILGPAGIQVADKF
>NZ_CP019488.1|WP_010968385.1|166400_167411_+|type-II-secretion-system-F-family-protein
MFGIDITVLGLAGLVALAAAALAYGVLYPQIETEKKAEGRLRRVSASETDRTKIKAARDRVNEMSKRRKSVQDSLKELEKKQQEKSANTAPSMKKRLLQAGLSISLAQFYLFSALFGLFAFLVVLLAGAGLLIAAGVALIGAAGLPRWIVGSMVKRRCRKFLDEFPNSLDVMVRSIKSGLPLNDALRLIASDGQEPVRTEFRRVVESQQVGLNVPEACARMIHSIPLPEVNFFAIVIAIQAQAGGNLSEALGNLSKVLRERRKMKAKVSALSMEAKASACIIGALPFIVATLVYLTSPDYMMVLFTDPRGHIIMGASAVWMSIGIWVMRNMINFDI
>NZ_CP019488.1|WP_010968384.1|164941_166342_+|CpaF-family-protein
MPAVQPVPVERSAAPVLGETVAAPSRPQAAAPPQRRRAPRAEDYYDTKSQVFSALIDTIDLSQLSKLDIESAREEIRDIVNDIITIKNFAMSISEQEELLDDICNDVLGYGPLEPLLARDDIADIMVNGAGQIFIEVGGKVEESEIRFRDNGQLLSICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAVLLQIIGRVRCNIVISGGTGSGKTTLLNCLTRYIDSTERIITCEDSAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRMESMIAMGGYTLPARTVREIISGSVDVIIQASRLRDGSRRITHITEVTGMEGDVIITQDLMRYEIDGEDANGRIVGRHVSTGIGRPHFWDRARYFNEDKRLAATLDAMEKQQ
>NZ_CP019488.1|WP_010968383.1|163524_164811_+|transcriptional-regulator
MNAIEYTIDSGGTGDWPADGTRPGDLEQLRPLPRISIHAFCESEAVQRLMERCGQDRRMAKVSLRVTGGGIAAAANTFAGASTPNLIILETATEPGALLSELAPLAEVCDPSTRVIVIGRHNDIALYRELIRNGISEYMVAPVGMADMLSAVSAIFVDPEAEPLGRSLAFIGAKGGCGSSVIAHNCAWGISNLFSTETILADLDLPYGTANIDFDQDPPQGIAEAVFAPERLDEVFLDRLLTRCSEHLSLLAAPSMLDRAYDFETGAFQPILEILQRSAPVSVLDLPHGWTDWTRSVLSAADEVVITAAPDLASLRNAKNLLDALKKLRPNDKVPHLVLNQVGVPKRPEIAPDEFCASLEIEAAAIIPFDAVLFGNASNSGRMIAEIDRKSPAAETFAQLSHLLTGRTAIKKARRGGLGKVLAKLGRR
>NZ_CP019488.1|WP_014529988.1|162773_163502_+|pilus-assembly-protein-CpaD
MQKRSAARTSLERQPPMALNRLPHRVVLYAIVAALLAGCASKDKLATGALPDDYRTRHPIVLTEGERTIDIPIASGDTRLTQGTRDVIRGFAAEYRNASSSVIQIMLPRGSVNGHAAQIVRKDIRRLLAASGVSPKKMIETTYDASVTGDAAPIRLSYVAITAQTAPCGAWPEDLALNTLENRNYYNFGCATQSNLAAQIANPTDLVGPRQMSPIDAEQRGQVIDSWRGTDKGDGGTTIVFN
>NZ_CP019488.1|WP_010968390.1|173913_174873_-|glyoxylate/hydroxypyruvate-reductase-A
MPAKSPVIVDLKFIPEEVEAALAGAFPGREVIDLADPAHQERDLSGIDYAVVWKSAPDLFSRAPDLKVVFSGGAGVDHVLTLPGLPDVPLVRFVDRTLTTRMSEWVMMQCLLHLRQHRAYEALAKKHEWRDLSQPEAADVTVGIMGMGVLGQDAARKLAAMGFKVIGWSRSKRVIEGVETYDAAGLDAFLGRTDFLVGLLPLTPDTRGIFNAALFAKLSRNGPFGAPVFINAGRGGSQVEADILECLDSGVLGGASLDVFEREPLSPESRFWDMPNVYVTPHVAASSDVRALFVHVEHQIARFESGLPLEHVVDKVAGY
>NZ_CP019488.1|WP_010968391.1|174883_176512_-|ABC-transporter-ATP-binding-protein
MTDTLLSVRDLSVAFHQGGETSLAVDRISFDIKRGETVALVGESGSGKSVSANSILKLLPYPAASHPSGEILFNGKDLLKASDDELRHVRGNDVTMIFQEPMTSLNPLHTIEQQIGEILEIHQDLKGAAARARTLELLEQVGIREAEKRLGAYPHQLSGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLKSLKDEHGMSMLFITHDLGIVRKIADRVCVMTKGKIVETGPTAEIFANPQHAYTRHLLASEPRGEPPPSDASRPIVIEAKDMKVWFPIKAGFLRRVVDHVKAVDGIDLTLRAGQTLGVVGESGSGKTTLGLALTRLISSKGRIAFVGEDIDAYSFREMRPLRNRMQVVFQDPYGSLSPRMSIADIIGEGLKIHEKALTDGERDQRVAAALEEVGLDPATRWRYPHEFSGGQRQRIAIARAMVLKPQFVMLDEPTSALDMSVQAQVVDLLRDLQRKHNLAYLFISHDLRVVRALANEVIVMRLGKVVEQGPAERIFEAPTEDYTKALMAAAFNLEAVNLAAVHQ
>NZ_CP019488.1|WP_095919847.1|176520_177654_-|ABC-transporter-permease
MSTATAYAGAPEKGWLTPIGRRRWQNFKANRRGYWSLWLFLLLFGLSLFAEFIANDKPILASYKGEILVPVLFDYPEEKFGGFLAETDYRSDFIRDEIGANGWMIWPPIRYSYQTVNSSIPHSAPTPPFWLMSEEERCSAYPQGADDPGCIAGNLNWLGTDDQARDVMARMIYGFRISVLFGLALTIASAVIGVSAGAVQGYFGGWTDLLMQRFIEIWSSMPVLYILLIIAAILPPGFFILLGIMLLFSWVGFVGVVRAEFLRARNFEYVNAARALGVGNCTIMYRHLLPNAMVATLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFVGEATRDAFDPRKTFR
>NZ_CP019488.1|WP_003531958.1|177653_178736_-|microcin-C-ABC-transporter-permease-YejB
MGAYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVGGGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPVIDLIIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTLLTKNSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYIFSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFERRDV
>NZ_CP019488.1|WP_003531957.1|178916_180776_-|ABC-transporter-substrate-binding-protein
MPNFCRTVKPGLAASLLTAALLLLPPASNAEEQPVWHHATSSIGEPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILAKGEVATGVSSLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSFDMVKEHNPLFSNYYRHVISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKIASFQAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYAFFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPAMKDGRVIREEIENPLRATGIMQAFVPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGTELASSGLPEGREKEILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAKTGEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGIWAQTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRALDRVLLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMDFPDAWWSKNTAAK
>NZ_CP019488.1|WP_010968392.1|181067_182135_+|penicillin-insensitive-murein-endopeptidase
MKFDARAALRRCGSTVLALIMGVSLVSAEAAANDAPPAKELFGAKDLPMQAAPASFGFYSKGCLAGGVAIPTDGPTWQAMRLSRNRRWGHPAMIALIERFSHDAVEKIGWPGLLLGDISQPRGGPMLSGHASHQIGLDADIWLTPMPQRTLSYQERETISATSMLDKSKFLTVDPSIWTPSHARLIMMAASYPQVERVFVNPAIKKKLCDTWRGDRAALGKVRPIYGHDYHFHIRIKCPPGSKGCKDQAVVPAGDGCDKSLAWWFTDEPWAKPKQKPGAKPPKPKFAKLADLPKACALVLNGPAPASEQEATYGTAYRAPAAIPAAATSIEAVIEAAGEAPLANIPVPSPRPGLQ
>NZ_CP019488.1|WP_003531955.1|182255_182636_+|methylglyoxal-synthase
MADRKCLALIAHDQKKDDLAAFAKANEAVLSKWKIVATGTTGGRVLDVCPALDIVRLKSGPLGGDQQIGALIATGDVDCLIFFVDPLTAMPHDVDVKALMRLAIVYDIPMALNRATAEQLIDFRRN
>NZ_CP019488.1|WP_010968393.1|182697_183717_+|glucokinase
MPNASEHSFPFPILIGDIGGTNARFALLTDAYGEPKQLAPIRTGDFATIEEAMQKGILDKTSVQPRSAILAVAGPIKGDEIPLTNAGWVIRPKDMLAGLGLEDVLVINDFEAQALAIAAPADQDVVQIGGGAVRPFHSRVVLGPGTGLGVAGLVYAQHTWIPVPGEGGHVDIGPRTERDFRIWPFLEPIEGRMAGEQILCGRGIMNLYRAVCAANGEEAVLADQAAVTTSALSGADAAAVETVSLFATYLGRVAGDMALIFMARGGVFLAGGISQKILPALTKPEFRAAFEDKAPHSALMRTIPTFAVIHPMAALSGLAAFARTPRDFGVAMEGRRWRR
>NZ_CP019488.1|WP_010968394.1|183825_185631_+|ABC-transporter-ATP-binding-protein
MNAKDRNKRAVDSETITGILKRVIAENGRDHIRGYAFAIACLVVVAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQAVALSKIGNNIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTSIARDLLTLIGLVVVMFSKDWLLSLIVFFVAPPLLLGLRYISRRLRLATREAVEVNSRVLGAMQETIQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTETFAGLAISSVLAYAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNARMIYEILDTVPHQRDRPDATELRLGEATVELRDVRFAYGTGEEILKGVSFRAEGGKTTALVGPSGAGKSTIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIRDNIRYGRPDATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARALVRNAPVLLLDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGIVVEEGSHEELARRPDGLYARLHNLQGSGADTVAEAQIL
>NZ_CP019488.1|WP_010968395.1|185648_186467_+|4-hydroxy-tetrahydrodipicolinate-reductase
MNETDMKLVVVGAAGRMGQTLIRIIHETAGVRLHAAIERTGSPFIGRDAGELAGAGPMGVAVTDKPLEAFVEAEGVLDFTAPAATVEFAGLAAQARIVHVVGTTGCSADDEARIRAAARHARVIKSGNMSLGVNLLGVLTEKAARALPAGGWDIEILEMHHKHKVDAPSGTALLLGEAAARGRGIDLADHSVRVRDGHTGARPEGSIGFATLRGGSVIGEHSVVIAGEGEMVTLSHSATDRSIFARGAVAAALWGRSRKPGFYSMLDVLGLD

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Crispr_ID: NZ_CP019488_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019488_2

1129565-1129675

Orphan

Consensus_repeat	Method
GGGCGAAGGGCCGGTCTATCCGAACATGTGAATGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019488_2

>merge|NZ_CP019488|2|1129565-1129675|CRISPRCasFinder
GGGCGAAGGGCCGGTCTATCCGAACATGTGAATGTCCGGAGAGGCAGGCCCGTACGGACTCCCGCCAGGAGAAAACGGGCGAAGGGCCGGTTTATCCGAACATGTGAATGT

>NZ_CP019488|2|2|1129565-1129675|CRISPRCasFinder
GGGCGAAGGGCCGGTCTATCCGAACATGTGAATGT	CCGGAGAGGCAGGCCCGTACGGACTCCCGCCAGGAGAAAAC
GGGCGAAGGGCCGGTTTATCCGAACATGTGAATGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019488.1\|WP_010968996.1\|1122428_1123367_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP019488.1\|WP_010969002.1\|1133393_1133795_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP019488.1\|WP_003527345.1\|1124930_1125086_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019488.1\|WP_003527346.1\|1123376_1124666_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP019488.1\|WP_003527322.1\|1137470_1138427_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP019488.1\|WP_003527334.1\|1131302_1132190_+\|proline/glycine-betaine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226644
NZ_CP019488.1\|WP_003527321.1\|1138455_1139958_-\|AMP-nucleosidase	unknown	unknown	gnl\|CDD\|236222
NZ_CP019488.1\|WP_010968994.1\|1116667_1118986_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP019488.1\|WP_010968998.1\|1126371_1127661_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP019488.1\|WP_010969000.1\|1130083_1131082_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270359
NZ_CP019488.1\|WP_003527320.1\|1140037_1140358_-\|YnfA-family-protein	unknown	unknown	gnl\|CDD\|224656
NZ_CP019488.1\|WP_010969001.1\|1132279_1133293_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|274313
NZ_CP019488.1\|WP_010969005.1\|1136355_1137375_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP019488.1\|WP_003527344.1\|1125123_1125300_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019488.1\|WP_010968997.1\|1125438_1126299_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381680
NZ_CP019488.1\|WP_095920168.1\|1113696_1116657_+\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237612
NZ_CP019488.1\|WP_010968992.1\|1112264_1113662_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP019488.1\|WP_095919948.1\|1134875_1136363_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP019488.1\|WP_010969003.1\|1133933_1134860_+\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP019488.1\|WP_010968995.1\|1119348_1122003_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585

Protein	Function_ID	Function_description	E-value
NZ_CP019488.1\|WP_010968996.1\|1122428_1123367_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.33806e-16
NZ_CP019488.1\|WP_010969002.1\|1133393_1133795_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	3.33936e-42
NZ_CP019488.1\|WP_010969003.1\|1133933_1134860_+\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	4.46621e-74
NZ_CP019488.1\|WP_003527346.1\|1123376_1124666_-\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41852e-81
NZ_CP019488.1\|WP_003527334.1\|1131302_1132190_+\|proline/glycine-betaine-ABC-transporter-permease	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	2.97932e-138
NZ_CP019488.1\|WP_003527321.1\|1138455_1139958_-\|AMP-nucleosidase	gnl\|CDD\|236222	PRK08292, PRK08292, AMP nucleosidase; Provisional.	0
NZ_CP019488.1\|WP_010968994.1\|1116667_1118986_-\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.01082e-54
NZ_CP019488.1\|WP_010968998.1\|1126371_1127661_-\|Hsp70-family-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	0
NZ_CP019488.1\|WP_010969000.1\|1130083_1131082_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270359	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.87733e-106
NZ_CP019488.1\|WP_003527320.1\|1140037_1140358_-\|YnfA-family-protein	gnl\|CDD\|224656	COG1742, COG1742, Uncharacterized conserved protein [Function unknown].	3.23612e-41
NZ_CP019488.1\|WP_010969001.1\|1132279_1133293_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|274313	TIGR02817, Putative_oxidoreductase_transmembrane_protein, zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. [Energy metabolism, Fermentation].	0
NZ_CP019488.1\|WP_010969005.1\|1136355_1137375_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	3.67535e-71
NZ_CP019488.1\|WP_010968997.1\|1125438_1126299_-\|uracil-DNA-glycosylase	gnl\|CDD\|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	2.76855e-63
NZ_CP019488.1\|WP_095920168.1\|1113696_1116657_+\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237612	PRK14108, PRK14108, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
NZ_CP019488.1\|WP_010968992.1\|1112264_1113662_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.58696e-52
NZ_CP019488.1\|WP_095919948.1\|1134875_1136363_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.77467e-51
NZ_CP019488.1\|WP_003527322.1\|1137470_1138427_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	8.0146e-08
NZ_CP019488.1\|WP_010968995.1\|1119348_1122003_-\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0

>NZ_CP019488.1|WP_010968998.1|1126371_1127661_-|Hsp70-family-protein
MASALGLDFGTTNSVLAQTEGASTRSIVVESPTGRSDTTRTALSFLKDAGPSPLKVEAGQAAIREFIDNPGECRFLQSIKTFAASALFQGTLIFGKRYEFEDLMQRFLTRLRDYAGNNWEATFRRVVIGRPVHFAGANPDEKLALERYNRALTRMGFPEVHYVYEPVAAAFYFARNLDRDATVLVADFGGGTTDYSIIRFESQAGRLTATPIGHSGVGIAGDHFDFRIIDNIVSPLIGKGSLFKSFDKLLEVPSSYYANFGRWNQLSIFKTLRDFTELKKLVRASLEPEKLESFVELIEHDEGYPLYQAVSATKMRLSQAEETEFAFAPLGERARRTVRRDEFEGWIAPDLARIEEALDEVLSTTATTPDGIDKVFLTGGTSFVPAVRRLFENRFGKERIESGGELLSIAHGLALIGERDDIAAWTAAA
>NZ_CP019488.1|WP_010968997.1|1125438_1126299_-|uracil-DNA-glycosylase
MISANDLSRSELAALLAFHAEAGVEWLLEEEPVDRLAEFEAMKSRRAQSRAVPQTGATAAEPQQSAPPAAARERRPAPPAPPPVVAIPDEQAIKEAQFVADAARSLGELRTAMEAFAGCNLRNSARNLVFAEGSAASGVMIIGPMPYADDDRDGRPFAGRHGEMLERMLSGIGLSREDVLLANAVPWRPPGNRVPSAREADICRPFIERQIALAEPKQLLLLGNFTARFFFGGETIHQLRGEWRELTFGGTSIPTLATLHPQDLVAAPINKRFAWLDLLAFKSRLG
>NZ_CP019488.1|WP_003527344.1|1125123_1125300_-|hypothetical-protein
MTARYRPIHSSFETLRYAGASSRTPFNSFGSAANEQLTAIGLARTTRPAQIFAEFIQR
>NZ_CP019488.1|WP_003527345.1|1124930_1125086_-|hypothetical-protein
MSKPLDSIRALVDTISDIRTAVRASREYSRLSIASDGRRVHDGAASRLLPS
>NZ_CP019488.1|WP_003527346.1|1123376_1124666_-|MFS-transporter
MLANFASVFSLMLSTFLMMVAFGLQSYVIPVRSVAESWSTLTISIFATGYTLGFTLSCIVTPKFVLRVGHVRVFTALITLLSIAILMCGLVVDWRAWIGFRAVSGFAIAGSYLVIESWLNERVTNENRGLLFSLYLITTMVGTIGGQYLVPLGDPSNTSLFILCGVLFSLALLPTALSSSPMPAPPARANFDIPALYRRSPVAVVGGFLAGALSGAWLNLGGVFTQKIGLSTGEGATLLASLLAGSAISQVPIGRASDRMDRRIVMVACGIAGVVSCLAMSVSIASSPPVLYALAACIGTVLFPIYALNVAHANDLARPDEYVEISSGLMITYGLGTISGPLMVGPVMDRFGPVALFIALAVYFALYSGYAAWRILQREQHDGLVAKTDFQATTVLPTPGPDVTGPLAQQDAGELIEDDTVPAWEQRAE
>NZ_CP019488.1|WP_010968996.1|1122428_1123367_+|DMT-family-transporter
MDADDASPMKGIVLKVLSVVVFVCMSTCIKAAGDDIPTGQITFYRSAFAMVPILGFLACRGALRDAFRTTDITGHLVRGFVGILAMSCGFYGLVHLPLPEAIAIGYAMPLLAVAFAAIFLGEIVRLYRWSAVFVGLAGVFIITWPRLTLFNEGGFGSAEAMGAVAVLLSAALGATAMVLVRKLVQKERTHTIVLYFSLSAAVFSLATLPFGWSELSWQAFVLLTIAGFCGGVGQILLTESYRHADMSTIAPFEYTSIVLGIVIGYFLFGDVPTATMLAGTAIVVGAGIFIIYREHRLGLERKGARKHVTPQG
>NZ_CP019488.1|WP_010968995.1|1119348_1122003_-|aminopeptidase-N
MRTNTGQIVHLENYRPTDFVLERVDLTFELDPRETKVEARMIFHRREGVSPSAPLVLDGDELTMTGLLLDQVAVPGTLYEATDDTLTIRGLPEAAPFEITVTTALSPETNTKLMGLYRTSDVYCTQCEAEGFRRITYFPDRPDVLAVYTVNIIADKASAPLLLSNGNYLGGADMGDGRHFASWFDPHPKPSYLFALVAGDLGVVEDAFTTASGRDVALKIYVEHGKEPRAAYAMDALKRSMKWDEEVFGREYDLDIFMIVAVSDFNMGAMENKGLNIFNDKYVLADPETATDADYANIEAIIAHEYFHNWTGNRITCRDWFQLCLKEGLTVYRDHEFSADMRSRAVKRIAEVRHLKSEQFPEDAGPLAHPVRPTQYREINNFYTTTVYEKGSEVTRMIATILGRDLFKKGMDLYFERHDGQAVTIEDFIACFEAASGRDLKQFSLWYHQAGTPLVTATGTYDAARQTYTLSLEQTVPPTPGQSSKAPMHIPLRFGLLLPDGSEARPSAVSGAEITGDVLHLTERKQTVTFSGIPSEPVPSFNRGFSAPVNLHLTQSAEHRALIARHETDLFARWQALNAMALDNLVKAAAEARTGQPIDCDDALVDALLAAAGDDRLEPAFRSQVMSLPSETDIGREIGSNNDPDAIYAGRQAILAAIATAGKDTFARLVNEMSLSGPFRPDADSAGRRALRNSGLSYLVYADGSPDKAADAFSSANNMTDLSQALTLLAHRFPDARETADALAVFKKRFADNALVIDKWFAIQATIPGASTLDRVRALMSDPLFNASNPNRVRSLVGTFAFANATGFNRIDGEGYRFLARQILDIDTRNPQLAARILTSMRSWRSLEKIRAGHARSALEEIARASNLSADVSDIVDRMLKDEH
>NZ_CP019488.1|WP_010968994.1|1116667_1118986_-|PAS-domain-containing-protein
MADARRGSAAEGRLRLKFPGFSGLEREFIEQAKIFAEPASQKLAMAEPMLKRSIPVLIIAFLLIVAISRMSGIMDEHARMEASSRRTVSLAAAAAAGVFQTGGSELFAEGRRWEVERRLTEFLPAEILDAGIFLLTVRRDGRVFAGTQDGVHLIGRTLSAIAPEVATLQYYGEGASVVRASIDGTEHFIALRQLPDSGGAVLAATSIARFEAAWRDEISLNVTLFAGVSAILMVVLYAYYIQAKRTRDADAVFAESNLRVETALSRGRCGLWDFDLDNRRLFWSRSMYEMLGMQGDASVLSFGDAARLMHVEDRGIYRVARAIAKGNERQIDQVFRMRHADGHYVWLRARAQVIRTVSGRTHLIGIAMDVTEQHRLAQRYAEADQRLADAIECTSEAFVLWDKHDRLVMCNTHYQQAWQLPDHVLVPGTERTIVHAAAARPVVERRIADPDRSNHSQTSEVQLADERWLQINERRTRDGGLVSVGTDITLLKRHQVRLRESERRLMATIGDLSASRVTLEQQKAELSIANANYQAEKERAEAANRAKSEFLANMSHELRTPLNAILGFSEILQDQMFGPLGSEKYHEYSRDIFESGKHLLNVINDILDMSKIEAGHMRITRERIDLAPLIEETLRFTTIPAERKNIRVVQQISSGLTMFADRRAMKQVLLNLLSNAVKFTNEGGRISLRARKVRGAVTLTIADSGIGIPKGALQKIGQPFEQVQSQYAKSKGGSGLGLAISRSLTRLHGGTMKIHSAENVGTIISVRIPDRG
>NZ_CP019488.1|WP_095920168.1|1113696_1116657_+|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MAEAIERSLSDIDVVAIRPASQADAKAALSVLKDAAKGSDHIAKLIASDAPLKDFLVAAFALSPFLRDTARSHPAILEALLSETLPAFLKRRIEAARVAWRGDAAGAALPDAEIMTRLRRAKREVAFAVALADLSRLFGGRETTGWLSDFAEAAVSAAIDHLLLGAHESGKFVLKDSSAPSTASGVVVLGMGKLGAGELNYSSDIDLVVFYDPQSSIITNRDDAPETFARLLRRLIRILQERTGDGYVFRTDLRLRPDPGSTPLAIPVEAAMLYYESRGQNWERAAFIKARPIAGDLEAGERFLKELTPFVFRKYLDYAAIADIHSIKRQIHAHKGHGEIAVKGHNIKLGRGGIREIEFFVQTQQLIAGGRTPALRLRQTETMLRMLAESGWIDGATAEELIEAYWFLRDVEHRIQMVHDEQTHLLPETEPELRRIAYMLGFEDTASFSNALSRVLRTVERRYAQLFEQEAKLSTETGNLVFTGQQDDPDTLETLKKLGFQRPSDIANIIRTWHYGRYRATQSVEARERLTELTPELLRVFGESRRADEAFLRFDHFLSGLPAGIQLFSLLGNNPGLLSLIVNIMSSAPRLADIIAAKPHVFDGMLEPGLLAELPTRDYLAPRIATFVGGGRHYEEVLDRLRIIAAEQRFLIGIRLLTGAITGLQAGRALTDLADLIIAAALDAVLEEVRSAHGRFPGGRVAIVGMGKLGSHELTAGSDIDLILLYDYDDEVLESDGAKPLDPVRYFTRVTQRLIAALSAPTAEGILYDVDMRLRPSGNKGPVATRITAFVKYQRTEAWTWEHLALTRARCICGDESLVGEAEAIFAEILTEKRDIAKIRKDVEEMRGLIDKEKPPKDIWDFKLIPGGLVDIEFIAQYLALVAPARGVTSPPAGTHTLEALKALGAGMMNANDLDTAAEALVLFTELSQLVRLCIDGDFDPKEAPAGLVDLVCRAGDYPDLTHLEADIRRLSKAVRRIFQGVVAAA
>NZ_CP019488.1|WP_010968992.1|1112264_1113662_+|HAMP-domain-containing-histidine-kinase
MSRISVLFRTTAVRLSALYLVLFSLCAAFLVFYVTGMSERLLQQQTRDSIAAEVTQIADVYDRAGINGLLRSLERRARQPGANLYVIAGPNGEILAGNVAALQPGLLDDEGWKSEPFRYRRFTDESRAERHVALAQVLVLDNGLRILVGRDLQEPEKFRVLVRQALMVALGIMGLGALVIWFGIGRNALRRIDRMSEASTKIMAGDLSQRLPTSGSGDEFDRLSESLNAMLERIEKLNEGLKQVSDNIAHDLKTPLTRLRNKAEAALADTEGSNQSGALEQIIAESDQLIRTFNALLMISRVEAGSAVAEMSEVDLARIVADCVELYEPLAEDKEMRIEAEAAPGVAISGNRELISQALGNLIDNAIKYAEGAENPLIRVEMMRSDRHVVLTVADHGPGIPENMRGEVVKRFVRLDESRSKPGTGLGLSLVDAVMEMHRGSLELSATEEDGRGLAVRMVFPAVAT
>NZ_CP019488.1|WP_010969000.1|1130083_1131082_+|ABC-transporter-substrate-binding-protein
MKKLLATTCLAAGLLGLGSAASAAECGDVTIANMNWQSAEVLASVDKFILTEGYGCSAELVVGDTVPTITSMIEKGEPDIAPEGWVDLLPDVVNRGLQEGKLVGAAVALSDGAVQGWWVPKYIVDANPDIKTIDDVLKHKELFPDPEDPSKGAIFNGPQGWGGTVVTTQLYKAYGAEAAGFTLVDTGSAAGLDGSIAKAYERKQGWAGYYWAPTALLGKYEMVKLEHGVPNDMAEWKRCNTVADCPDPKKNDWPKDKVQTLVTKEFADRAGPAMEYLNTRAWTNDTVNKLMAWMTDNQASGEEGAKHFLEENPDLWTKWVSPEVAEKIKAAL
>NZ_CP019488.1|WP_003527334.1|1131302_1132190_+|proline/glycine-betaine-ABC-transporter-permease
MEWLTKFPHMDDDRLRQLKKIIDEGFRSFTRAYGDAIESFFDPLQFFLIHAERFMTRTPWPIILILIAVIAWFASRNWKIVAGAIGTLLLIGYLDMWDDTMKTISMIFVCTVLSIAIGIPMGIIMSRSDRFQNIVNPVLDVMQTMPSFVYLIPVVMLLGIGKVPGLIAVVIYAIPPMIRLTNLGIRLVDKDVLEAADAFGSSNWQKLKNVQMPLALPTIMAGINQTIMMALAMVVIASMIGVQGLGQPVLKAIANQYFTLGIFNGLAIVGIAIIFDRVSQAYGRRLQRHREIIHG
>NZ_CP019488.1|WP_010969001.1|1132279_1133293_-|zinc-binding-alcohol-dehydrogenase-family-protein
MRAVAYKTPQPIANETALIDVDLPVPTPGERDLLVEVRAVSVNPVDTKVRAGVQPEPEQLKVLGWDAAGVVKAVGPKVTLFKPGDEVFYAGAIDRPGTNAELHLVDERIVGRKPQSLDFAAASALPLTAITAWETIFDRLRVNDPVPGAANAVLIIGGAGGVGSIAIQLLRALTNVTVIATASRAETREWALKLGAHHVLDHSRPLAAEIEQLALGAPAFVFSTTNTDKHVDEIVKLIAPQGRFALIDDLAVLDVTPFKRKSVSIHWEMMFARPLFGTPDMIEQHNLLNRVAELVDGGKIRTTLTETLGPIDAATLRKAHQMIETGRTRGKLVLAGF
>NZ_CP019488.1|WP_010969002.1|1133393_1133795_+|helix-turn-helix-transcriptional-regulator
MSRPRAKLTNTFPGCPVESALSFIDGKWKGVILYHLMSEGVLRFNELRRRLPSVTPRMLTRQLRELEEAALLSRTVFPVVPPRVDYALTARGESLKPVIMALKAWGDENVLCDGDSMTLKPLESRSRPELKGA
>NZ_CP019488.1|WP_010969003.1|1133933_1134860_+|diacylglycerol-kinase-family-lipid-kinase
MKVKAIFNRDGGTFRTTDMDAYSRKVEEDFRAAGHEIEIAVVGADEMRDTLETACGRGDLDAIVAGGGDGTISAAAGVAWKTGMPLGIVPAGTMNLVARSLKLPLDIWKVPEVLANGRIIDADIGSADGRAFVHQFSMGLHARMVRYRQSYRFASRLGKISASTRAAIGVIFNPPDFEIEFDADGHRERRHVSAISVSNNHFGHDTLMYAEDLTSGHLGFYTAPPLSPAGVAKLSFDILRGKFRSSTLITEMSALTVDLHFPKMDRKINCVIDGELVPIRSGRVALRVHPGELKLLVGSQESNAGKTV
>NZ_CP019488.1|WP_095919948.1|1134875_1136363_-|glycosyltransferase-family-39-protein
MLEAVNRRPGAAVLAVAGYFLLCIILRVSVSSSLEIDEAEQAFLSQFLALGYGPQPPFYNWLQYGLAELIGPSLATMTILKNGLLFLCCLFYGLAARLVLADRRLPPIAMLGVLTLPPVFLLAQRDLSHTIAALFAVSLFLYGFLRTLKRPSLFSYLLTGVAVGIGLMAKYNFVLVPVAAIVAVLPERELRARILDWRILPAIAIATLIVLPHAYWMLQNFGFASGGTLNEMREREAEGLLLQAFYGVYSLGSAIIGGSLGPLLVFGLVFRGKLRAIWQAESQWSRIIGRMLALCLIAVLLVVLGVAATHVREKWLVLFLVLIPLYLCLKIEAANIDLTDSLRRFFLLVCVIALGALVMVSARAVVRPWFGHYSRLNIPYAAFAEAVAQAEGGQPALILANDKQIAGNLRTQFSRAQVTMPRPSNALPVDMSRRPLLLVWHDDAQPEAPVPDLLRNALSELGVPGAAAAPRHLALPYLYGTGADRYGFSYIWVAE
>NZ_CP019488.1|WP_010969005.1|1136355_1137375_-|glycosyltransferase-family-2-protein
MNRIEEPVKPMTEVLEGVELSIVVPVFNEEESVGPLVTRIRAAMAGFLKSWELILVDDGSTDRTLPNARKELSNPDLQLKIIELQKNFGQTAAMQAGIDAASGRLIATLDGDLQNDPADIPNMVAAIEERGLDLLVGWRQNRRDALILRKIPSWCANVLIGKITGVRLHDYGCSLKIYRGSIIKQVKLMGEMHRFIPAWVAGVVPSSRIGEMPVTHHARHYGTSKYGISRTFRVILDLLAVLFFMRYKARPGHFFGSIGLAAGGLSVLILLYLAIDKFILGNDIGTRPMLIVGVMLFLSSIQLITTGILSEMMARAYFRDDEVTSYIVRQTFEREQPHA
>NZ_CP019488.1|WP_003527322.1|1137470_1138427_+|flippase-like-domain-containing-protein
MNTNWERSRRSWLARNRLALISAAAIAAYAIFVEWVWGWPVLLRQWAEIGVGPVLSALALLVATYFIRCYRIHDYFPGETRGRFLSLFRVTQVHNLLNIMLPFRAGETSFPLLMRSEFGVPLVRGTAALFVMRLLDLHALLTVAAVGLVAGRGQGAIGWVLWLIAFLSPLAFFLMKEKALTVMRRVAPAKAGPLLDEAEAGLPIGIPAFLRAWAMTMLNWAVKVVVLAWVLAIMGVAPLAASFGGALGGELSSVLPVHAPAGVGTYAAAIVAGAVSFGASADQATLETLGRASVNAHLMVIVSAVAGTMLSLLLRPKA
>NZ_CP019488.1|WP_003527321.1|1138455_1139958_-|AMP-nucleosidase
MNKRISSNSVLSVATPEPFEPQLFDDPTEAVDCLEALYERNTRFLCEGFEGLGKSGRPLTRFRACYPQVSIETSSFGHVDSRLSFGYVSAPGVYTTTITRPKLFRHYLKEQLGHLMRNHGVGVTVSESSTPIPLHFAFGEGAHVEASAAESIDIPLRDLFDAPDLTTTDDEIANGSYEPGPGEPSPLAPFTAQRIDYSLARLSHYTATSARHFQNFVLFTNYQFYVDEFCAWARQQMAEGGNGYTAFIEPGNITTPAGADRPDADYSLARLPQMPAYHLKKKGHGGITLVNIGVGPSNAKTITDHIAVLRPHVWLMLGHCAGLRNSQRLGDYVLAHAYMREDHVLDDDLPVWIPLPALAEVQVALQDAVAEVTGYKGYDLKQIMRTGTVATIDNRNWELRDQRGPVKRLSQARAIALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMASAFYRTQVSQHLKIGILALQKLAAMPPEKLHSRKLRSFYETSFQ
>NZ_CP019488.1|WP_003527320.1|1140037_1140358_-|YnfA-family-protein
MPAYAIYFLAALAEITGCFAFWSWLRLGKSALWLIPGMASLALFAWLLTMVDAAAAGRTYAAYGGVYIVASLSWLWLAEGVRPDHWDMTGAAVALAGSAIILAGPR

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Crispr_ID: NZ_CP019488_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019488_3

2288270-2288382

Orphan

Consensus_repeat	Method
CCCTCATTCCTGTGCTTGTCACAGGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019488_3

>merge|NZ_CP019488|3|2288270-2288382|CRISPRCasFinder
CCCTCATTCCTGTGCTTGTCACAGGAATGAGGCAGAGAGGGTACGGTCCTTCGGAATACTTCTCGCAGGCCGTGCATCCCCGCCTCCCTCATTCCTGTGCTCGTCACAGGAAT

>NZ_CP019488|3|3|2288270-2288382|CRISPRCasFinder
CCCTCATTCCTGTGCTTGTCACAGGAAT	GAGGCAGAGAGGGTACGGTCCTTCGGAATACTTCTCGCAGGCCGTGCATCCCCGCCT
CCCTCATTCCTGTGCTCGTCACAGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019488.1\|WP_095920034.1\|2282410_2283433_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380530
NZ_CP019488.1\|WP_010969517.1\|2291069_2291972_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019488.1\|WP_003535070.1\|2292524_2293898_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl\|CDD\|366662
NZ_CP019488.1\|WP_095920032.1\|2281119_2282313_-\|phytanoyl-CoA-dioxygenase	unknown	unknown	gnl\|CDD\|227609
NZ_CP019488.1\|WP_010969513.1\|2284273_2285956_-\|NAD+-synthase	unknown	unknown	gnl\|CDD\|237577
NZ_CP019488.1\|WP_003535076.1\|2296380_2297076_-\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP019488.1\|WP_010969519.1\|2294130_2295522_-\|glutathione-disulfide-reductase	unknown	unknown	gnl\|CDD\|213618
NZ_CP019488.1\|WP_003534106.1\|2276982_2277627_+\|autoinducer-synthase	unknown	unknown	gnl\|CDD\|226430
NZ_CP019488.1\|WP_095920036.1\|2298011_2299907_-\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225536
NZ_CP019488.1\|WP_010969509.1\|2279926_2280748_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180462
NZ_CP019488.1\|WP_010969512.1\|2283443_2284271_-\|TolB-family-protein	unknown	unknown	gnl\|CDD\|223893
NZ_CP019488.1\|WP_003535074.1\|2295726_2296269_-\|DUF2059-domain-containing-protein	unknown	unknown	gnl\|CDD\|225725
NZ_CP019488.1\|WP_013844510.1\|2289194_2290928_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227002
NZ_CP019488.1\|WP_010969515.1\|2288770_2289193_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|227296
NZ_CP019488.1\|WP_003534108.1\|2276088_2276826_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777
NZ_CP019488.1\|WP_010969518.1\|2291993_2292389_-\|GFA-family-protein	unknown	unknown	gnl\|CDD\|226314
NZ_CP019488.1\|WP_010969520.1\|2297295_2297979_+\|phosphoglycolate-phosphatase	unknown	unknown	gnl\|CDD\|237310
NZ_CP019488.1\|WP_010969507.1\|2277794_2278922_+\|DUF2865-domain-containing-protein	unknown	unknown	gnl\|CDD\|371363
NZ_CP019488.1\|WP_003534093.1\|2286224_2288144_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP019488.1\|WP_010969508.1\|2278945_2279629_-\|5,6-dimethylbenzimidazole-synthase	unknown	unknown	gnl\|CDD\|380321

Protein	Function_ID	Function_description	E-value
NZ_CP019488.1\|WP_095920034.1\|2282410_2283433_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380530	cd06307, PBP1_sugar_binding, periplasmic sugar-binding domain of uncharacterized transport systems. Periplasmic sugar-binding domain of uncharacterized transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes.	2.0178e-87
NZ_CP019488.1\|WP_003535070.1\|2292524_2293898_-\|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl\|CDD\|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP019488.1\|WP_095920032.1\|2281119_2282313_-\|phytanoyl-CoA-dioxygenase	gnl\|CDD\|227609	COG5285, COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism].	5.00091e-103
NZ_CP019488.1\|WP_010969513.1\|2284273_2285956_-\|NAD+-synthase	gnl\|CDD\|237577	PRK13981, PRK13981, NAD synthetase; Provisional.	0
NZ_CP019488.1\|WP_003535076.1\|2296380_2297076_-\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	8.21528e-117
NZ_CP019488.1\|WP_010969519.1\|2294130_2295522_-\|glutathione-disulfide-reductase	gnl\|CDD\|213618	TIGR01424, Glutathione_reductase_cytosolic, glutathione-disulfide reductase, plant. The tripeptide glutathione is an important reductant, e.g., for maintaining the cellular thiol/disulfide status and for protecting against reactive oxygen species such as hydrogen peroxide. Glutathione-disulfide reductase regenerates reduced glutathione from oxidized glutathione (glutathione disulfide) + NADPH. This model represents one of two closely related subfamilies of glutathione-disulfide reductase. Both are closely related to trypanothione reductase, and separate models are built so each of the three can describe proteins with conserved function. This model describes glutathione-disulfide reductases of plants and some bacteria, including cyanobacteria. [Energy metabolism, Electron transport].	0
NZ_CP019488.1\|WP_003534106.1\|2276982_2277627_+\|autoinducer-synthase	gnl\|CDD\|226430	COG3916, LasI, N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	1.55042e-97
NZ_CP019488.1\|WP_095920036.1\|2298011_2299907_-\|murein-L,D-transpeptidase	gnl\|CDD\|225536	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP019488.1\|WP_010969509.1\|2279926_2280748_-\|SDR-family-oxidoreductase	gnl\|CDD\|180462	PRK06198, PRK06198, short chain dehydrogenase; Provisional.	7.66456e-165
NZ_CP019488.1\|WP_010969512.1\|2283443_2284271_-\|TolB-family-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	1.73907e-62
NZ_CP019488.1\|WP_003535074.1\|2295726_2296269_-\|DUF2059-domain-containing-protein	gnl\|CDD\|225725	COG3184, COG3184, Uncharacterized protein conserved in bacteria [Function unknown].	3.19008e-64
NZ_CP019488.1\|WP_013844510.1\|2289194_2290928_+\|hypothetical-protein	gnl\|CDD\|227002	COG4655, COG4655, Predicted membrane protein [Function unknown].	0
NZ_CP019488.1\|WP_010969515.1\|2288770_2289193_+\|pilus-assembly-protein	gnl\|CDD\|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	2.76293e-23
NZ_CP019488.1\|WP_003534108.1\|2276088_2276826_+\|transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	3.50703e-21
NZ_CP019488.1\|WP_010969518.1\|2291993_2292389_-\|GFA-family-protein	gnl\|CDD\|226314	COG3791, COG3791, Uncharacterized conserved protein [Function unknown].	6.93053e-44
NZ_CP019488.1\|WP_010969520.1\|2297295_2297979_+\|phosphoglycolate-phosphatase	gnl\|CDD\|237310	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP.	2.43772e-103
NZ_CP019488.1\|WP_010969507.1\|2277794_2278922_+\|DUF2865-domain-containing-protein	gnl\|CDD\|371363	pfam11064, DUF2865, Protein of unknown function (DUF2865). This bacterial family of proteins has no known function.	1.36883e-30
NZ_CP019488.1\|WP_003534093.1\|2286224_2288144_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	7.21123e-140
NZ_CP019488.1\|WP_010969508.1\|2278945_2279629_-\|5,6-dimethylbenzimidazole-synthase	gnl\|CDD\|380321	cd02145, BluB, 5,6-dimethylbenzimidazole synthase. BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.	4.8092e-111

>NZ_CP019488.1|WP_003534093.1|2286224_2288144_+|LTA-synthase-family-protein
MARIDSAVSSSQVYADGESSSARYTRTLSGARSALFTLLIAIALVFTVEVIVRWSWPDTVAYFADPMRPAWTTVAVFFLAMLGVDALFGREHKAALLIAPLAVVPAFISQQKQVFLSDPLYPTDFLFGRQIMELMPVLVKDRPWTAVGVVAGLIAAIVVGALLLRFAWQNFPKLTRRERLMRIAFALPLLVAFWNIMDYNQFSWIRDRLRVIPIMWDQTENYRHNGFALAFAINLPMANVNAPAGYMADAIDRIPVKPLPAGTTHRGKPDVIVLMSESFWDPTRLPKVKLTPDPMPTIRELQGGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRNPIPSLATFFRGEGYVSRAIHPFQGWFWNRTAVYKAFGFDMFRSEENMPAMQKRGIFASDESLTKEIIRQADEVEDPFFFFAVTLQGHGPYEANRYAKNTIKVEGDLPEADRQVLATYAQGVKEADDSLKMLMDWAKERDRETIIVLFGDHLPPLNTVYSSTGYMKGITAERKGPKDQMKAEHETPLVVWSNKTGPKKNIGTISPAFLSYQILKQAGYEHPYYTGFLGKVYDHYRVLDRYMLIRKNGKDVADWLRQPKVPASLRDYRFLQHDMMFGKRYSTERFFKSHAELYSAGL
>NZ_CP019488.1|WP_010969513.1|2284273_2285956_-|NAD+-synthase
MTAQKAAPSTLRIAVAQLNPTVGDIAGNVAKAREARTAAAREGADLLLLTELFISGYPPEDLVLKPAFLKACEQAVEKLAAETADGGPGVVIGFPRQAAGLRHNSVAVLDGGRVIAIRDKVDLPNYGEFDEKRVFDAGEMPGPVNFRGVRIGIPVCEDIWGDLGVCETLAESGAEILLSPNGSPYYRGKVDVRHQVVLRQVIETGLPMIYANQLGGQDELVFDGASFAFNADKSLAFQMSQFEEAVAVSEWKRGAGGWISANGLKSRIPEGEEADYRACMLGFRDYVNKNGFRNVVLGLSGGIDSAICTALAVDALGEERVRTVMLPYRYTSRESLRDAEACAKALGCRYDIVAIEEPVEGFLSALADTFEGTEAGITEENLQSRTRGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALARWRNGTVPPGALGPSGEVIPQNIIDKAPSAELRPDQTDQDSLPPYPVLDDILECLVEKEMSTEEIVARGHEEATVHRIEHLLYIAEYKRRQSAPGVKITRKNFGRDRRYPITNRFRDRG
>NZ_CP019488.1|WP_010969512.1|2283443_2284271_-|TolB-family-protein
MRSSVEIFDIATGETRVVWQTERLVEAPNWSPDGKFLIINGDGRLYRLGFDGSDPTEIDTGFARHCNNDHGISPDGSTLVISDKTEFGSSAIYLLPAEGGTPRLVTRNLPSYWHGWSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRMQIWRVRPDGKDVQRITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPDGGNARVLLELFGGQGTVNVPNWSPSGTAFAFVRYEPEE
>NZ_CP019488.1|WP_095920034.1|2282410_2283433_+|LacI-family-transcriptional-regulator
MAHPFLVKDIAFQAGLSTATVDRVLNGRRGVRQQTVMRVNAAIRELERQQAGLEVQGRKYAVDVVMEAPERFTEAVRKAFESEAATFMPTVFRSRFHFAETMRPQDISQLLDRIRLRGTDGVVLKAPDVPEIAAAVARLENAGVAVVTLVTDLPHSSRTAYAGADNRAAGETAAYLIGERFADRPATVLVTISSSRFRGEEEREIGFRRVLREKYPHIGVVEISEGHGRNEETGALALKAIASHPEINAAYPIGGGNRAVLDAFGQLQRGCVLFVAHDLDEDNLDLLRQGLVQFVLHHDLKTDVRMAFHAVLERRGALRASEKRHLSAVEVITPYNLPRI
>NZ_CP019488.1|WP_095920032.1|2281119_2282313_-|phytanoyl-CoA-dioxygenase
MKTDNPARARLERVWLNEAACDIEEFRAAVEHRVSLADYPHAADCQKNILIYDSARLAGDCATQDGRRSVLAEICEALATGPGVAVFKRAFTDTRVIDEASGIFNEIIEEQHRTNSGGGDHFAKPGANDRIWNSLEKHCLKNPENFAAYYGNAIIALVSEAWLGPNYQMTAQVNRVNPGGASQSPHRDYHLGFQTSAVIEQYPAHVHRLSPVLTLQGAVAHCDMPVESGPTLFLPYSQTYLPGYLALKRPEFRTYFEENHVQLPLEKGDVVFFNPALFHAAGSNRSAGIKRVANLLQVSSAFGRAMETVDREHMCVVLFPAPKVLAAGGKLTQDEIANAVAACAEGYSFPTNLDRDPPVGGLAPRTQAQLMHEALAGEWSVEAFAEALADQAAKKLS
>NZ_CP019488.1|WP_010969509.1|2279926_2280748_-|SDR-family-oxidoreductase
MSTDHARLDGKIAIVTGGTQGLGATIAALFAERGAAGVVICGRNAAKGEAKAAEIAAATGSKVVYVPADLERVEDARAVAAACDRAFGRVDALVNAAAITDRGTILDTSPELFDRMFAVNVRAPFFLMQEVIKVMRREKTEGTIVNIGSMSAKAGQPFIAAYCASKGALETLTKNTAYAVLRNRIRVNGLNIGWMASEGEDRIQREYHDAPANWLEKAAASQPFGRLVDPAEVARACAYLSSAESGLMTGSVICFDQSIWGAYDASPHPEAPL
>NZ_CP019488.1|WP_010969508.1|2278945_2279629_-|5,6-dimethylbenzimidazole-synthase
MLPDPNGCLTAAGAFSSDERAAVYRAIETRRDVRDEFLPEPLSEELIARLLGAAHQAPSVGFMQPWNFVLVRQDETREKVWQAFQRANDEAAEMFSGERQAKYRSLKLEGIRKAPLSICVTCDRTRGGAVVLGRTHNPQMDLYSTVCAVQNLWLAARAEGVGVGWVSIFHESEIKAILGIPDHVEIVAWLCLGFVDRLYQEPELAAKGWRQRLPLEDLVFEEGWGVR
>NZ_CP019488.1|WP_010969507.1|2277794_2278922_+|DUF2865-domain-containing-protein
MSASPKVASKIRRIAAVLVPLALAAAGPAAASGVCERLSARLAGLPTGFTTNASLRDFTGAVSRQNIELRRAKNDRRRMECSSDSVVVIGGDDEAACAELDDTIARMEASLRQLKAQRRHLIGGGDDDVRRRILAAMELNGCSGAPREGWDAGSAEGQFASAADGTEVHRNILRDLPPDSGAYPLLLDAPRAELPLTDDDFAGSLRTMCVRTCDGAFFPISSHATPADFGRDADLCRARCPGAETELYYHVLATEEADQMVSATTGRPYTDLPTAFAYRARSVGSPGICGCGIPDPATDANGQKAVSAGKLTVVSPSVITIGSEKKAPAKPIAERPYDPAKNKVRVVGPTFLPQEESAIDLKHPLGPRYQPLQEN
>NZ_CP019488.1|WP_003534106.1|2276982_2277627_+|autoinducer-synthase
MIRIVNGNGRSQHPQAIDEMFRLRKRVFHDFLKWDVKTEGDWEIDHYDKANPLYVMSYSPDTGKIRGSLRLLPTLGPNMLDDTFPILLGDNPEIRSASVWESSRFCIDPEISQDRASNQVTIAAAELMCGVGEMSLASGISHIVTVTDVFLERMFRRMGCPGERIADPHRIGSVHAVAIAWEVSRNLLETMKAVASIEGTVLDRPMSLETARAA
>NZ_CP019488.1|WP_003534108.1|2276088_2276826_+|transcriptional-regulator
MANQQAVLNLLDIVEYGGCADPERFFALMRRTFNISHLLYLEAESLPDGLRICRLHHTFGAYAAEIYAARGLYRIDPILKLALGGVRPVEWATARRRFPECEPLFEAAEEIGLSTEGVALPLPSPAGRMALLAIGANMSPVEWSAYRRCHLRDFQLAANLFHASMLEHSAMAGALDERDLRLTGRETEVLTWSAAGKSYWEIATILGISERTVRFFMTNARRKLNVVSNTQAVAHAVRHALIPTI
>NZ_CP019488.1|WP_010969515.1|2288770_2289193_+|pilus-assembly-protein
MSVFNRLLASRKGAAAIEFAIIAPLFFMCVLTLIAYGIYLSAAHSIQQVAADAARTAIAGLSLEERERLATDYIRRTTMNQTFIDSSRMNVTVRDDANNTNQFTVTISYDASDLPIWKLFTFALPGEQIERYATIRVGGI
>NZ_CP019488.1|WP_013844510.1|2289194_2290928_+|hypothetical-protein
MHGATTAFRRCLKSRTGNIGVSAALVMPLVVASMGLGIDYGYLTLQRRELQSVADLASIAAAADVSSAEEAVLAHFRSNDLGFAVSTPSGLMTVDGKLLPNDVETAAKGVATIVRGRYVPDPAIDAGQRFIRGALPADAVQVTLEKKGDIYLAALFSEPPDLSVIGTAASSKIAAFSVGSRLASLNGGLLNAILGQMLGTNIALKVMDYEALIDADIDIQPFLKIIATRLSLTAASYEDVLTAELTVPQLLGSLRLVQGLSGTVTSALKTVELATAGNKQTLTLAQILNIDPKKSLGVDAGSDWAMKVSALQIVSAAAVIANGEHQIALDAVAGLPGIASVKVRLAIGEPPLETPSHRLGSPGAAVRTAQTRLAVEVVIDGLAALAGTRIRLPIYVELAHAEAKLSDIRCYGGTPENAAVIIDAVPGVAEIALGDVDPTVLSSFSSDARVTRARLLDGLIKIDGIAHVESKNLQPSRLAFSPAEVSSRTIKSVSTRDILSSTTRTLLGNLDAQINVGGLLSIGSPTLLQQALAQTLGAVTAPVDQLLYNLLLLVGVRVGEADVRVTGVKCQRPVLVQ
>NZ_CP019488.1|WP_010969517.1|2291069_2291972_+|hypothetical-protein
MQRVAEKGSSEQQVPTGLTVGDLVRNPNFPQILQAGARTLIALNDLFPRVARLVASHQKWMLTQAAYSLHLERDVNNPESGITAARLLKFMRDTGGASRNTAAAFLAELVAYKMLQPASGGRTKRARPLEPTEVSETAMRLWFKSQMSTIDLLDGGTRVERVEADKSIFERAQPLAARRLLSDSRWTTPPKGVAIFVWSESGGVILDDLMTRVSEFAPMDGKVWVEVSLAKLAEHYLISNTHVRRIFARADAAGFLGKSEDGRRGRFWLSARLIEEYVSWQAVKIEALASAYDQASDWAA
>NZ_CP019488.1|WP_010969518.1|2291993_2292389_-|GFA-family-protein
MEINEGGCLCGAVRFKTRGKLRELIFCHCSQCRKQTGLYYAATNVLDREMEVEGVENVTWYRSSNEARRGFCRYCGSALFWKADGLDYTSILAGTFDGSVALEPGYHIFCADKGHYYDISDDLPRFAGSRP
>NZ_CP019488.1|WP_003535070.1|2292524_2293898_-|3-deoxy-7-phosphoheptulonate-synthase-class-II
MAQTWTPNSWRQKPIQQVPDYPDLAVLDSVEARLAKYPPLVFAGEARRLKSALANVAEGRGFLLQGGDCAESFAEHGADTIRDFFRAFLQMAVVLTFGAQQPVVKVGRIAGQFAKPRSSGVEKQGDVTLPSYRGDIINGIEFTEEARVPNPERQVMAYRQSAATLNLLRAFAMGGYANLENVHQWMLGFVKDSPQAERYRKLADRISETMDFMKAIGITAENHPSLRETDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHMIWIGDRTRQPDHAHIEYCRGIKNPLGLKCGPSLTADGLLELIDILNPANEAGRLTLICRFGHDKVAEHLPRLIRAVEREGKKVVWSCDPMHGNTITLNNYKTRPFERILSEVESFFQIHRAEGSHPGGIHIEMTGNDVTECTGGARALSGDDLADRYHTHCDPRLNADQALELAFLLAERMKGGRDEKKMVVNG
>NZ_CP019488.1|WP_010969519.1|2294130_2295522_-|glutathione-disulfide-reductase
MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGEIVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNNPTSPDHDLIATAVFSQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTMYQPSYRVRNGERVG
>NZ_CP019488.1|WP_003535074.1|2295726_2296269_-|DUF2059-domain-containing-protein
MNKFAGLARTFATAAILVSVSVPAVRAQDVTEDQIKAARATIAALGVTNSFDNILPNLAERLKNTLIQASPNHQELITATVDEKALSLAGRRSDLEREAATIYAKTFTVEELNAIADFYNSTAGKKLLNDGPIASREMLKAADIWAAGVSRDLTSEATKSLDEKIGNAPAANAGAAAPAQ
>NZ_CP019488.1|WP_003535076.1|2296380_2297076_-|ribose-5-phosphate-isomerase-RpiA
MDARQMKIKAAEAALEHVESGMRLGIGTGSTAEEFVRLLAEKVASGFQISGVPTSERTARLCLELGVPLKSLDELPELDLTIDGADEVDGKLRLIKGGGGALLREKIVASASTRMIVIADESKVVDVLGAFKLPIEINPFGQVATRLAIEKTASRLGLAGEIVVRSSGDGVFMTDGGHLILDASFGRIPDADALAVELNAIPGVVEHGLFIDVASMAIIAGPEGARTLTAS
>NZ_CP019488.1|WP_010969520.1|2297295_2297979_+|phosphoglycolate-phosphatase
MSLPLVVFDLDGTLVDTAPDLVASLNHAVTQAGIEPVTYADLTHLVGHGARAMIERTFALRGRTIAEEELTWQMKEFVDFYHGSMPGESLPYPGLIEALDRLQDAGLKLAVCTNKPEMLAKRLLEGLGLLGRFAAISGGDTFTVRKPHADHLLSTVSNAGGMAERAVMVGDSLNDVLVARNASVPSIVVPFGYSDVPIESLLPDRIIGHFDELTPDLVETVLSRKPK
>NZ_CP019488.1|WP_095920036.1|2298011_2299907_-|murein-L,D-transpeptidase
MRIIKSAAIVTLMSGCVVATMDVQPASAITFMDFIRGGKKRDVQEQVQPRRQLPGVDMFAPQRLDQKAAKPPRITGPRYYTYKAEPLRRIATDRLVDPVVTGSVLNGALPPMLRSPLADARQFLPEVDVRAPAEVAKAVENFYGTRTDFLWIEGTGVSGRAKAALGVLSDAAKVGLDPLDYAVIVPPEDFDRGDMIAREKALVRFEIAMSAAVLTYVQDTVRGRIDPNRISGYHDFKRKNVDLLGFLEKIETSSDVAALVESQNPKSAQFTALRQELERLRTQVEAAPRVEIAPGTLLKPGESNPELANVIAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADGIVGQASIRALTGGDTTQGKIDKVEIAMEQARWLPDGLGDRYVFINQPAFTASYTEQGTEQFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQVEVGGRVVPSTAVNWYGSTNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQRALSHGCVRLADPRRMAAAVLGVSVDEVGMEISGGRNKALPVSAKVPVYVSYFTAWPNKDGTVEYFDDVYERDMYMNRAFEATRKARSLEG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

544898 : 564035

EBPR_podovirus(21.43%)

tail,portal

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100220621.1\|544898_545492_+	ribonuclease HI	A0A2R3U9N2	Salmonella_phage	6.0e-19	35.5
WP_017276907.1\|545548_546058_+	hypothetical protein	NA	NA	NA	NA
WP_127619617.1\|546252_546975_-	hypothetical protein	NA	NA	NA	NA
WP_017276905.1\|547027_547177_-	hypothetical protein	NA	NA	NA	NA
WP_017276904.1\|547234_547639_+	hypothetical protein	A0A0K1LM71	Caulobacter_phage	4.8e-28	57.8
WP_095919874.1\|547661_549002_+	hypothetical protein	A0A0F6SJ03	Sinorhizobium_phage	3.0e-42	51.9
WP_017276902.1\|549015_549300_+	hypothetical protein	A0A0M4RBJ6	Mycobacterium_phage	1.6e-09	39.5
WP_017276901.1\|550074_550464_+	hypothetical protein	NA	NA	NA	NA
WP_017276900.1\|550351_551788_+	DNA packaging protein	C8CLI4	Xylella_phage	9.7e-164	63.6
WP_095919876.1\|551787_553845_+\|portal	phage portal protein	F8TUR6	EBPR_podovirus	1.2e-199	59.6
WP_028054277.1\|553844_554084_+	hypothetical protein	NA	NA	NA	NA
WP_095919878.1\|554117_555086_+	hypothetical protein	F8TUR8	EBPR_podovirus	5.2e-36	35.4
WP_095919880.1\|555109_556105_+	DUF5309 domain-containing protein	A0A088FAT7	Sulfitobacter_phage	2.4e-129	72.2
WP_017276895.1\|556340_556664_+	hypothetical protein	F8TUS1	EBPR_podovirus	8.0e-26	50.0
WP_017276894.1\|556660_557263_+	hypothetical protein	A0A2K9VHC9	Pseudomonas_phage	1.8e-10	25.5
WP_017276893.1\|557259_557862_+	hypothetical protein	A0A088FAT4	Sulfitobacter_phage	3.5e-22	35.4
WP_095919882.1\|557858_559475_+	hypothetical protein	A0A088F6U1	Sulfitobacter_phage	2.7e-85	39.9
WP_095919884.1\|559474_559936_+	hypothetical protein	NA	NA	NA	NA
WP_017276892.1\|559939_561544_+\|tail	tail fiber domain-containing protein	X2CXH6	Brucella_phage	5.1e-12	39.0
WP_017276891.1\|561540_561792_+	hypothetical protein	NA	NA	NA	NA
WP_017276890.1\|561791_564035_+	hypothetical protein	A0A076G7H2	Sinorhizobium_phage	4.0e-23	50.4

DBSCAN-SWA_2

1927664 : 1938913

uncultured_Mediterranean_phage(80.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969277.1\|1927664_1928699_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	2.0e-22	42.6
WP_086017693.1\|1928792_1929611_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.7e-32	34.7
WP_010969279.1\|1929603_1930323_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.8e-40	45.2
WP_010969280.1\|1930387_1931497_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-29	37.6
WP_003534564.1\|1931591_1931798_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	8.2e-08	65.9
WP_010969282.1\|1931871_1932519_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_003534569.1\|1932515_1933358_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.7e-43	41.2
WP_003534571.1\|1933494_1934778_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.0e-101	47.0
WP_010969283.1\|1934805_1935576_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-22	30.9
WP_014526709.1\|1935572_1936226_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.6e-15	34.6
WP_010969285.1\|1936397_1937051_+	biotin transport regulator	NA	NA	NA	NA
WP_010969286.1\|1937374_1938913_+	LysM peptidoglycan-binding domain-containing protein	I3PV24	Clostridium_phage	1.0e-14	32.8

DBSCAN-SWA_3

2780732 : 2790367

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003532953.1\|2780732_2782787_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-35	33.6
WP_107010522.1\|2782875_2783001_-	hypothetical protein	NA	NA	NA	NA
WP_095920090.1\|2783219_2784254_-	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	4.1e-15	68.6
WP_095920176.1\|2784277_2785465_-	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	5.4e-35	27.8
WP_010969854.1\|2785724_2787635_-	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.1e-74	35.7
WP_010969855.1\|2787680_2789684_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-87	41.5
WP_003532937.1\|2789917_2790367_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.0e-15	38.4

DBSCAN-SWA_4

2822128 : 2871963

Klosneuvirus(16.67%)

holin,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010969874.1\|2822128_2822848_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_003534512.1\|2822903_2823209_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_010969876.1\|2823439_2824543_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_003534506.1\|2825015_2825471_+	MaoC family dehydratase	NA	NA	NA	NA
WP_010969877.1\|2825467_2825938_+	MaoC family dehydratase	NA	NA	NA	NA
WP_003534501.1\|2825983_2826526_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.5e-35	45.5
WP_010969878.1\|2826700_2826886_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_010969879.1\|2826904_2828164_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A1B0V011	Roseobacter_phage	4.3e-51	42.1
WP_095920093.1\|2828160_2828793_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_003534495.1\|2828789_2829413_-	DUF1285 domain-containing protein	NA	NA	NA	NA
WP_010969882.1\|2829771_2830785_+	MoxR family ATPase	NA	NA	NA	NA
WP_010969883.1\|2830788_2831709_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_010969884.1\|2831705_2834519_+	DUF4159 domain-containing protein	NA	NA	NA	NA
WP_010969885.1\|2834529_2836599_+	membrane protein	NA	NA	NA	NA
WP_010969886.1\|2836613_2837165_-	N-acetyltransferase	NA	NA	NA	NA
WP_010969887.1\|2837422_2838415_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_010969888.1\|2838580_2838787_+	antitoxin VbhA family protein	NA	NA	NA	NA
WP_010969889.1\|2838849_2839758_+	cell filamentation protein	NA	NA	NA	NA
WP_010969890.1\|2839882_2840374_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003534453.1\|2840456_2841359_+	metallophosphoesterase	NA	NA	NA	NA
WP_010969891.1\|2841552_2842068_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_003534449.1\|2842071_2842899_+	anti-sigma factor	NA	NA	NA	NA
WP_003534446.1\|2843021_2843450_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_010969893.1\|2843446_2843698_-	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_010969894.1\|2843835_2845545_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_003534440.1\|2845645_2845783_-	hypothetical protein	NA	NA	NA	NA
WP_010969895.1\|2846015_2847167_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_003534438.1\|2847339_2847927_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.1e-28	37.3
WP_010969897.1\|2849966_2850878_-	aminoglycoside phosphotransferase APH(3')	Q75ZG1	Hepacivirus	8.6e-17	30.2
WP_010969898.1\|2850909_2851374_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-28	47.1
WP_010969899.1\|2851370_2852291_-	cation transporter	NA	NA	NA	NA
WP_010969900.1\|2852459_2854649_-	anthranilate synthase	NA	NA	NA	NA
WP_010969901.1\|2854922_2857154_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_014529145.1\|2857277_2858264_+	extensin family protein	NA	NA	NA	NA
WP_010969903.1\|2858424_2860104_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_010969904.1\|2860194_2861418_-	DUF2333 family protein	NA	NA	NA	NA
WP_010969905.1\|2861421_2862711_-	hypothetical protein	NA	NA	NA	NA
WP_003537933.1\|2862894_2864058_+\|transposase	IS4-like element ISRm16 family transposase	NA	NA	NA	NA
WP_010969906.1\|2864235_2864640_-	DUF559 domain-containing protein	NA	NA	NA	NA
WP_010969907.1\|2864752_2866669_-	ATP-binding protein	NA	NA	NA	NA
WP_010969908.1\|2866672_2867821_-	hypothetical protein	NA	NA	NA	NA
WP_003535848.1\|2867882_2868971_-	hypothetical protein	NA	NA	NA	NA
WP_010969910.1\|2869131_2869719_-	thymidine kinase	A0A0K2FHC3	Enterobacter_phage	4.1e-52	54.7
WP_010969911.1\|2870004_2870961_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013844756.1\|2871117_2871963_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019486

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019486_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019486_1

295272-295381

Orphan

Consensus_repeat	Method
TCATCCCGGCGGTCCCGCCGCGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019486_1

>merge|NZ_CP019486|1|295272-295381|CRISPRCasFinder
TCATCCCGGCGGTCCCGCCGCGCGGCGATCAGGTCCATGAGCCGCTCGCGCCGGTCGCCGCGGTCGCCGATCAGTTCCATCAGGTCATCACGGCGGTCCCGCCGCGCGGC

>NZ_CP019486|1|1|295272-295381|CRISPRCasFinder
TCATCCCGGCGGTCCCGCCGCGCGGC	GATCAGGTCCATGAGCCGCTCGCGCCGGTCGCCGCGGTCGCCGATCAGTTCCATCAGG
TCATCACGGCGGTCCCGCCGCGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019486.1\|WP_095918776.1\|288236_288623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_010967335.1\|294183_294501_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288799
NZ_CP019486.1\|WP_010967330.1\|291475_291880_+\|BA14K-family-protein	unknown	unknown	gnl\|CDD\|369573
NZ_CP019486.1\|WP_095918788.1\|298832_299102_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_095918790.1\|299242_301000_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227903
NZ_CP019486.1\|WP_095918792.1\|304515_305370_+\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
NZ_CP019486.1\|WP_095918784.1\|293525_293834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_095918778.1\|289320_289992_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341362
NZ_CP019486.1\|WP_041169964.1\|294541_294889_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_088194909.1\|301041_302187_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|182881
NZ_CP019486.1\|WP_095918786.1\|293915_294203_+\|DUF1612-domain-containing-protein	unknown	unknown	gnl\|CDD\|336802
NZ_CP019486.1\|WP_010967341.1\|298082_298718_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236494
NZ_CP019486.1\|WP_095918796.1\|307163_307508_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_015242499.1\|297545_298025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_095918780.1\|289985_290309_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_010967329.1\|290815_291073_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_088194664.1\|302683_303172_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019486.1\|WP_095918774.1\|285973_287545_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|223740
NZ_CP019486.1\|WP_088194663.1\|303175_304405_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP019486.1\|WP_095918794.1\|305968_307171_+\|IS256-like-element-ISRm3-family-transposase	unknown	unknown	gnl\|CDD\|307151

Protein	Function_ID	Function_description	E-value
NZ_CP019486.1\|WP_095918790.1\|299242_301000_+\|hypothetical-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	1.34111e-51
NZ_CP019486.1\|WP_088194909.1\|301041_302187_-\|AI-2E-family-transporter	gnl\|CDD\|182881	PRK10983, PRK10983, AI-2E family transporter YdiK.	1.04982e-43
NZ_CP019486.1\|WP_010967335.1\|294183_294501_+\|hypothetical-protein	gnl\|CDD\|288799	pfam11972, HTH_13, HTH DNA binding domain. This is a helix-turn-helix DNA binding domain.	8.36466e-17
NZ_CP019486.1\|WP_010967330.1\|291475_291880_+\|BA14K-family-protein	gnl\|CDD\|369573	pfam07886, BA14K, BA14K-like protein. The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus and by Brucella suis. BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process.	8.86752e-10
NZ_CP019486.1\|WP_095918786.1\|293915_294203_+\|DUF1612-domain-containing-protein	gnl\|CDD\|336802	pfam07756, DUF1612, Protein of unknown function (DUF1612). This family includes sequences of largely unknown function but which share a number of features in common. They are expressed by bacterial species, and in many cases these bacteria are known to associate symbiotically with plants. Moreover, the majority are coded for by plasmids, which in many cases are known to confer on the organism the ability to interact symbiotically with leguminous plants. An example of such a plasmid is NGR234, which encodes Y4CF, a protein of unknown function that is a member of this family. Other members of this family are expressed by organisms with a documented genomic similarity to plant symbionts.	4.98576e-36
NZ_CP019486.1\|WP_010967341.1\|298082_298718_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236494	PRK09391, fixK, transcriptional regulator FixK; Provisional.	7.98396e-108
NZ_CP019486.1\|WP_095918792.1\|304515_305370_+\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	3.05667e-143
NZ_CP019486.1\|WP_095918778.1\|289320_289992_+\|CBS-domain-containing-protein	gnl\|CDD\|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.27807e-53
NZ_CP019486.1\|WP_095918774.1\|285973_287545_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	7.61359e-49
NZ_CP019486.1\|WP_088194663.1\|303175_304405_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	1.56393e-69
NZ_CP019486.1\|WP_095918794.1\|305968_307171_+\|IS256-like-element-ISRm3-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	0

>NZ_CP019486.1|WP_041169964.1|294541_294889_-|hypothetical-protein
MNKFLLMTAGLLLMPLPALSQSAPDSGSRDPGSIQDREIEDLLRSITDEVSGGSGGPRRGAAFLLRSGDATVAVRCDPRESMKDCVDLTTSLLEKARSAMPTGGGAPGTAPPPRP
>NZ_CP019486.1|WP_010967335.1|294183_294501_+|hypothetical-protein
MRCPWADCSRRDRAEGARPAGAGKNDDGAKLKGRRTSSTLPELVDLVMARPLVSASMVAKTLDVTPQAARRIVLELGLREIALVTVDDAASLVLRIVNTLQECFR
>NZ_CP019486.1|WP_095918786.1|293915_294203_+|DUF1612-domain-containing-protein
MDEDARLEEWRGVLRQAHDLPPVLQAIVALDAWNVLSVLQHAPWLGRVLAASILRQAGVTASAHLAAVNLGLETMPVERRRHRDRNFQLLALPMG
>NZ_CP019486.1|WP_095918784.1|293525_293834_+|hypothetical-protein
MQNDIGGELVHLEDLVLDDATKNVRTPTHEQTQPPGLSAAGLRSLRGRDFVSGSPAASSAADGTVEVTTDPDVDRSTEGGDESNGDVSVFGAEFVAIDAVLA
>NZ_CP019486.1|WP_010967330.1|291475_291880_+|BA14K-family-protein
MKAPTLAFAVLASAIGMSPAKAQTCIGICNGGTGGTTNHNLFIEREYRDFLQQRYPNYGSRYRGMRPDISIGPGATVGGPRVGVRQQFRLRQRMVIDANKHLRWCQERYLSYRLADDTFQPFEGARRPCNSPYN
>NZ_CP019486.1|WP_010967329.1|290815_291073_+|hypothetical-protein
MTAAPVTEKSRYRSRPPSLYAPWWKSKEVITPSVIGGGASLLTVIGGIPWQNLLLILVAFGAIAGFLYWRKNADRRAVARVEGMA
>NZ_CP019486.1|WP_095918780.1|289985_290309_-|hypothetical-protein
MATGAGHGTRGPKGVRVDPTTALPTEAEVLARLDRIRFSTEFDAPGRARQFLAYVVRETTAGRADRIRAYSIATEVFGRDSSFDAQTDAAVRIEGVAEKWFCERQRY
>NZ_CP019486.1|WP_095918778.1|289320_289992_+|CBS-domain-containing-protein
MHVKDVMTAKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSEASVLMADMAIDPDDRANAFIRRCSWRVGDVMTANPVTIEEEAPLARVAGLMQERGIKRIPVVRDGELGGIVSRADLLQAIFSTKPDETAAGDEAIRRSILVRLGENTSLEELDVTVTVTEGIVHFWGQVETAGCRRAARIMAESVHGVRGIVEHFPDPYTQ
>NZ_CP019486.1|WP_095918776.1|288236_288623_-|hypothetical-protein
MGTPVLDQVGFEMIVYVAEISGRGIAAFDAANDIEAQAQLANRGLLRDLIVLQNEGRALWDGVAEIHVRTATPEETEIWQTSRTAAVQSGEDSDDEGRHVFLVPVVDPSHDNFDDDDNPHHDDDRDGD
>NZ_CP019486.1|WP_095918774.1|285973_287545_-|mechanosensitive-ion-channel-family-protein
MASVGSFLAFEWPPLLRKIILALLLAVIVFRVVRAIGKLLFALSGASGIADQPSSAFESDAARRFWLWRISIIAGFLLFGWAIVSLMPALSFSNEVTRLAAFLFGLGILVTAVEVVWRRPDKPASLVIKSLLSLYLVVLWSAWVAGLLGLLWLGIYSLLLPPLVRGVGDVAQALATRAQRTGPPGIVLSVVIVRGARAAVIAAAVAWLAYIWRIRAAALAGSEPGAIVIPGLLNGIIALLVADLLWQMSKALIAYRMGLGPKDGSNVDELARSGRLRTLLPIFRNVLAVFIGAVTVLTILSGLGVQIAPLIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLDDAFRVGEYIQSGSYKGTVESFSLRSVRLRHHRGPIFTVPFGELGAVQNMSRDWVIDKMTLNVTYDADVDLARKLIKKVGQELAADPEFAADTIEPLKMQGVDSFGDFAIVLRMKLMTKPGAQFTIKRRAFMMIKKAFDENGIKIAVPTVHVSGGSDNAAAAQQVLNMRKAAELAANKAPVAP
>NZ_CP019486.1|WP_015242499.1|297545_298025_+|hypothetical-protein
MRATWAIPVAALVLLLDSSDGTAGQPGKSADQPSKYVPSVGEIMNKIDLSRSKLWYSVKLRNWALAGYQLDQVKTGFDDVSRHHPDKSNFDFANAQKIANLIEEAIVARSDEQFQQSFALMTTECNDCHRAVGKPFLHVGAPKIPSPYSDKMLEPGAFR
>NZ_CP019486.1|WP_010967341.1|298082_298718_-|helix-turn-helix-domain-containing-protein
MNTSISASWGRYINAIPPRSGEAALAPLSSFVDGQCIYSFGERADQVYQVEFGAVRVYRLAANGRRQILAFHFGGNWFGLQSRDRHSSNAEAIGVTGVRCISLQEEPLFRPALFSAALDNVSAAQEHQLVIGRQSAIERVAAFLLEMSERSGYSRRFELSMSRVDVADYLALTVETVSRSLTKLKHRGFIELHGARGIELVGYRALQNLCL
>NZ_CP019486.1|WP_095918788.1|298832_299102_-|hypothetical-protein
MNGEPDWKHCMAAALRRFPARSLQIRELSMRDEDFRGICEDFAAAENALAAVDQLPLHIREERRAEFKGLIESLAAEIAIALGPADGSI
>NZ_CP019486.1|WP_095918790.1|299242_301000_+|hypothetical-protein
MTIADRGSVRAGSPTALPTNTEILSQLDRIRLSAEFDVPDRARKFLAYIVGEAIAGRADRIKAYSIATEVFGRDSSFDAQTDPVVRIEAGRIRRALERYYFVAGSNDPIVIKIPKGGYAPAFEKRDGAPYQLSSGQAANVQSRSMPLEQTALWVSVATVGLLTCGLLANAFFGSAATTIESLTKPGGTRPSIPKLMVMPFEDLSQTPQSAMITRGLTDEVISNIAKFKEIVVVAGPAAPNPHIAEREYPAFALEGRVRLDGDKLRLGIRLVQHSDGSVVWANTYDEVLQPRKIIELQQNAAAAVASAIAQPYGIVFQANATHFMRSVPDDWQAYACTLAYYGYRGDLNPQTHATVQECLQQATTQFPDYATAWALLSLTYVDELRFRYRLHRSTTVSLAHAIEAAARAVELDPQNVRALQAEMLTLFFRGEVNAALTVGARAYAINPNDTELSGEYGFRLALSGQWRSGCDLVSKTVASNPGPVGYFEAALAVCRYIEHDYVAAERWARSADLHANPIYHVILLAILGKLGKMDLARTEREWLETNVPGFLENARNEVALRIHRPEDQQHFIEGLRQAGVSIPGK
>NZ_CP019486.1|WP_088194909.1|301041_302187_-|AI-2E-family-transporter
MDDNPSSQRNPDPVNPAARPSIEPRITEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGHRPRVAALVITMLGLLVIVAPLAAIAISFAEGIQVVLARLNDRSLLISAPPDSIRSFPLIGERIYSVWSMASDNLEAVLQQIKPSLLQAGSKALGKIASIGADLLSFVVSVLVAGFLFGSGARLANSAQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCVLILSLFKVPAPGAIAFVVLILCIIQIGPALVLLPVIVWAWTSMEFGMAALFTILLIPLLIIDNVMKPILVARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHSLLLIWMNTDTVGSEGLRLGASRLPNPT
>NZ_CP019486.1|WP_088194664.1|302683_303172_+|hypothetical-protein
MEDSLHPAAVAHLPPFITAPGQTDVLFNVMIVFVLLMIFVVGILYLRLHALPEHMAHGASKVQLQIVGVLALIALFTHNHLFWIAALLLAMVEFPNFSSPVESIARSLAKMADRHDGTDEPGTSAQPAAMPPRANESHASPPQWVPLEIEAVAGDDKAERRG
>NZ_CP019486.1|WP_088194663.1|303175_304405_+|HlyD-family-secretion-protein
MLEFLICSLLTIFPDYLVRRYVQGKRVGREINLYSMWFELRYGITACLILTISLITMIFYFHPSTSNVTAVFRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDDSEQQAALETARRRVAEIEAEAIVAQSELASADGLIAQAEGDYLQALNELETQVELNQRNPNIVARREIERLQVAVDGRDGARAASISNKRTLETKIASLLPAQKASAEAALTQAQVELDKTIVRAGTAGVVQQFALRAGDIVNPMIRSAGILVPEQRRIGLIAGFGQIEAQVMKAGMIAEATCIGKPFTIIPMVVTEVQDVIAAGQIRPTDQLVDAQQLASPGTLTAYLEPLYEGQFSGVPPGSSCIANAYTSNHDALHAPGISTPHWLFLHVVDAVGLVHAMILRLQALLLPVQTLVFKGH
>NZ_CP019486.1|WP_095918792.1|304515_305370_+|polyphosphate-kinase-2
MDKHTDDRKKNKANKAEDRKSAATEASETRSGGNYAKELARLQEEIAHLQAWVKKTGARIVIVFEGRDAAGKGGVIKRITERVSPRVFRVVALPAPTDREKTQIYMQRYIQQFPAAGEVVIFDRSWYNRPGVERVMGFCSEKKAKRFLEIAPRFEAAMIESGIVLLKYFLDVSEEEQDRRFRQRINDPLRQWKLSPMDVESYRRWWDYTRAYDEMIRMTDTDDAPWWIVPSDNKKQARVNCIAHILSSIPYEPVKFEEPDLGKRQKRPADFEGDTRRRTVPNLF
>NZ_CP019486.1|WP_095918794.1|305968_307171_+|IS256-like-element-ISRm3-family-transposase
MAIEKELLDQLLAGRDPSEVFSKDGLLDDLKKALSERILNAELDDHLDVERLEGGPANRRNGSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDFDDKIISMYARGMTVREIQGHLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYPLVFFDAIRVKIRDEGFVRNKAVYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELKNRGCQDILIAVVDGLKGFPEAITAVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPALRAIYRARDAEAGLKALEAFEEGYWGQKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYTTNAIEALNSKLRRAVRSRGHFPGDEAAMKLLYLVLNNAAEQWKRAPREWVEAKTQFAVIFGERFFN
>NZ_CP019486.1|WP_095918796.1|307163_307508_-|hypothetical-protein
MSEKVPGNGGSKHLFYGVLNPVDRSNEVLFGLIMVMTFTNSLSTTDAGRADVRSMLVGAVGCNLAWGIIDAVMYFMSSMAERKLSERTVHRVRSADDVKTGTVRNSVRWAGFIS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	709941-709998	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	618048-618105	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	534472-534529	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	320258-320315	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	295298-295355	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1180665-1180722	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1086301-1086358	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1186250-1186307	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	275823-275880	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	7342-7399	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	819905-819962	0	1.0
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	347456-347513	1	0.983
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	403311-403368	1	0.983
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	347117-347174	1	0.983
NZ_CP019486_1	1.1\|295298\|58\|NZ_CP019486\|CRISPRCasFinder	295298-295355	58	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	373772-373829	1	0.983

1. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

2. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

3. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

4. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

5. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

6. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

7. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

8. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

9. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

10. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

11. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
**********************************************************

12. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

13. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgctcgcgccggtcaccgcggtcgccgatcagttccatcagg	Protospacer
******************************.***************************

14. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

15. spacer 1.1|295298|58|NZ_CP019486|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 1, identity: 0.983

gatcaggtccatgagccgctcgcgccggtcgccgcggtcgccgatcagttccatcagg	CRISPR spacer
gatcaggtccatgagccgttcgcgccggtcgccgcggtcgccgatcagttccatcagg	Protospacer
******************.***************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

341907 : 350241

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_127523077.1\|341907_342276_+	DUF4055 domain-containing protein	A0A0A0RTF5	Escherichia_phage	9.5e-07	32.2
WP_014989928.1\|342290_342563_+	hypothetical protein	NA	NA	NA	NA
WP_003535606.1\|342827_343031_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.1e-07	51.7
WP_157749136.1\|343131_343560_-	hypothetical protein	NA	NA	NA	NA
WP_080599838.1\|344361_344802_-	hypothetical protein	NA	NA	NA	NA
WP_010968823.1\|345222_346860_-	chaperonin GroEL	A0A219YK78	uncultured_virus	1.1e-176	63.3
WP_010968824.1\|346936_347233_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	8.4e-22	58.7
WP_127570311.1\|347452_347761_+	hypothetical protein	NA	NA	NA	NA
WP_080599839.1\|347789_347951_+	hypothetical protein	NA	NA	NA	NA
WP_014989935.1\|348321_348771_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	8.6e-18	47.5
WP_095918822.1\|349362_350241_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.1e-21	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP019487

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019487_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019487_1

998314-998607

Orphan

Consensus_repeat	Method
TCGGCGGCAGCGGCGGTGCGGGCGGCA	PILER-CR
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CRISPRCasFinder
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP019487_1

>merge|NZ_CP019487|1|998314-998607|PILER-CR,CRISPRCasFinder,CRISPRCasFinder
TCGGCGGCGGCGGCGGTGCGGGCGGCACCTCCACCGCGTCCGGCAGCCAGGCGACGGCCAACATCACCGTCGGTGTCGGCGGCAGCGGCGGTGCGGGCGGCAATGGCGGCGCGGTCGGCATCACCTTCGACGATAACCATGGCAACAGCATCAGCACCGCGGGATACAGCGCCTATGGCGTGTTGCTGCAGTCGATCGGCGGCGGTGGCGGGCAGGGCGGCGACGGTTCCGACGAGGCGGCGGGCAGGATCACCGTCGGGGGCGGCTTCGGCGGCAGCGGCGGTGCGGGCGGCA

>NZ_CP019487|1|1|998314-998607|PILER-CR
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CCTCCACCGCGTCCGGCAGCCAGGCGACGGCCAACATCACCGTCGGTG
TCGGCGGCAGCGGCGGTGCGGGCGGCA	ATGGCGGCGCGGTCGGCATCACCTTCGACGATAACCATGGCAACAGCATCAGCACCGCGGGATACAGCGCCTATGGCGTGTTGCTGCAGTCGA
TCGGCGGCGGTGGCGGGCAGGGCGGCG	ACGGTTCCGACGAGGCGGCGGGCAGGATCACCGTCGGGGGCGGCT
TCGGCGGCAGCGGCGGTGCGGGCGGCA

>NZ_CP019487|1|1|998314-998416|CRISPRCasFinder
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CCTCCACCGCGTCCGGCAGCCAGGCGACGGCCAACATCACCGTCGGTG
TCGGCGGCAGCGGCGGTGCGGGCGGCAATGGCGGCGCGGTCGGCATCACCTTCGACGATAACCATGGCAACAGCATCAGCACCGCGGGATACAGCGCCTATGGCGTGTTGCTGCAGTCGATCGGCGGCGGTGGCGGGCAGGGCGGCG	ACGGTTCCGACGAGGCGGCGGGCAGGA


>NZ_CP019487|1|2|998509-998590|CRISPRCasFinder
	CCTCCACCGCGTCCGGCAGCCAGGCGACGGCCAACATCACCGTCGGTG
TCGGCGGCAGCGGCGGTGCGGGCGGCAATGGCGGCGCGGTCGGCATCACCTTCGACGATAACCATGGCAACAGCATCAGCACCGCGGGATACAGCGCCTATGGCGTGTTGCTGCAGTCGATCGGCGGCGGTGGCGGGCAGGGCGGCG	ACGGTTCCGACGAGGCGGCGGGCAGGA
TCACCGTCGGGGGCGGCTTCGGCGGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019487.1\|WP_010975822.1\|980264_981539_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP019487.1\|WP_095919496.1\|1002392_1003634_+\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP019487.1\|WP_157749146.1\|1013448_1014699_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|236724
NZ_CP019487.1\|WP_015243022.1\|988217_991556_+\|RTX-toxins-related-Ca2+-binding-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP019487.1\|WP_088194952.1\|1012265_1013156_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP019487.1\|WP_014527141.1\|985990_988033_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP019487.1\|WP_088194950.1\|1006274_1006463_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_074853281.1\|994180_994573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_010975829.1\|991681_992080_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_014527139.1\|992168_992951_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP019487.1\|WP_010975834.1\|1001395_1002313_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP019487.1\|WP_080591489.1\|1003658_1004585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_014527142.1\|984821_985985_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP019487.1\|WP_080591487.1\|1005459_1006002_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_010975842.1\|1011442_1012066_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP019487.1\|WP_014527143.1\|983709_984732_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP019487.1\|WP_014527138.1\|992938_994090_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019487.1\|WP_095919498.1\|1004753_1005257_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP019487.1\|WP_088195194.1\|1006438_1008220_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|179625
NZ_CP019487.1\|WP_014527144.1\|981535_982993_+\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294

Protein	Function_ID	Function_description	E-value
NZ_CP019487.1\|WP_010975822.1\|980264_981539_+\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP019487.1\|WP_095919496.1\|1002392_1003634_+\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	1.87845e-67
NZ_CP019487.1\|WP_015243022.1\|988217_991556_+\|RTX-toxins-related-Ca2+-binding-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.62449e-24
NZ_CP019487.1\|WP_088194952.1\|1012265_1013156_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.50422e-30
NZ_CP019487.1\|WP_014527141.1\|985990_988033_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019487.1\|WP_010975842.1\|1011442_1012066_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NZ_CP019487.1\|WP_014527139.1\|992168_992951_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.45864e-66
NZ_CP019487.1\|WP_010975834.1\|1001395_1002313_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP019487.1\|WP_157749146.1\|1013448_1014699_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|236724	PRK10604, PRK10604, sensor protein RstB; Provisional.	9.05431e-52
NZ_CP019487.1\|WP_014527142.1\|984821_985985_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019487.1\|WP_088195194.1\|1006438_1008220_+\|potassium-transporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	1.80518e-170
NZ_CP019487.1\|WP_014527143.1\|983709_984732_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019487.1\|WP_014527138.1\|992938_994090_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	4.76279e-171
NZ_CP019487.1\|WP_095919498.1\|1004753_1005257_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.20481e-16
NZ_CP019487.1\|WP_014527144.1\|981535_982993_+\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0

>NZ_CP019487.1|WP_074853281.1|994180_994573_+|hypothetical-protein
MRGGRIINTYKESHIQRVAHSHVEHGGARFAAVCRCMSAIFRGDTSDEARHQNQESPAEVFAGSIRTRRPSCVSVRAEHVAFFDRAGRRARRGGPGRRGVCGLQWKCNPDDRPGRLWIHMVGLLGRQWCR
>NZ_CP019487.1|WP_014527138.1|992938_994090_-|sensor-histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACYA
>NZ_CP019487.1|WP_014527139.1|992168_992951_-|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGGKVLDDTATVLPVVMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP019487.1|WP_010975829.1|991681_992080_+|hypothetical-protein
MKRPTNRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP019487.1|WP_015243022.1|988217_991556_+|RTX-toxins-related-Ca2+-binding-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP019487.1|WP_014527141.1|985990_988033_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP019487.1|WP_014527142.1|984821_985985_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP019487.1|WP_014527143.1|983709_984732_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFKKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP019487.1|WP_014527144.1|981535_982993_+|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP019487.1|WP_010975822.1|980264_981539_+|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NZ_CP019487.1|WP_010975834.1|1001395_1002313_+|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP019487.1|WP_095919496.1|1002392_1003634_+|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRRPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP019487.1|WP_080591489.1|1003658_1004585_+|hypothetical-protein
MQRWRRRPPLWQSITTIIPFRAPSQQRPPVRQEGQHPVPQVPRAPLPRRAPPALRSQHHLHRPRQCPLCLVPPGRPQRQWHPSSRLRRRRLPCRPRGRSFRRLRRPLPCRYREMTEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP019487.1|WP_095919498.1|1004753_1005257_+|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCNICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP019487.1|WP_080591487.1|1005459_1006002_+|hypothetical-protein
MVHPAKICLGTHDRVVQILLPSEHLVVIEIAPVEQIKGDAFEAAIPSFRRSARPSVRVVCQQSAPKRVAVVVESDYAVGHENMVTGEAFAGDDALGIKSGKGCLAQKHTGENGIRAISEEDAVRQSPAPHRVLFYAGLQRVQGRCTIKTESATISVVDDHCRVNQMIKCLRKEQNQLDVP
>NZ_CP019487.1|WP_088194950.1|1006274_1006463_+|hypothetical-protein
MGLIAMSERDLQRIEVLSQVIELDSKQVEWKDVRASTVAGAALRGARHLEIRSETWLLSPTA
>NZ_CP019487.1|WP_088195194.1|1006438_1008220_+|potassium-transporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCAILLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGGIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERKIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NZ_CP019487.1|WP_010975842.1|1011442_1012066_-|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NZ_CP019487.1|WP_088194952.1|1012265_1013156_-|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPVVAEVFSDDTRLVGRWWNKPFEYDLPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSATSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL
>NZ_CP019487.1|WP_157749146.1|1013448_1014699_-|HAMP-domain-containing-histidine-kinase
MRSRLFLKIYLTLLASLAAVAVASAAFVWLGQGEEESGWQSQRARFVAALIPPDMDNRTVEATIERFSRAFGADIAVYDPRGRLIASVGRPLPRDILDQPWRHGPGNFHTMVTELPDGRTVAARMERPLRPSGRNPLAYLALIAGVIGLAAYPVVRHLTRRLERLRVGVDAWGSGDFVARVPEDGSDEVAAVAKSFNRAADQVERLIKSHRALLANASHELRSPLARLRMAIDLYEQAPNDDRKQEIIRNLSELDTLIEEILLASRLDHVEKLDALESVDLLALVLEEGARNDVEVSGMPATVAGDARLLRRLVRNLLQNALHHGGPPVTAAVAQADGAAILRVRDHGPGIADSERHRVFEPFYRPSGRSEAAGGWGLGLALVRQIAERHGGGVRYESPPDGGACFVVTLPSKATL

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Crispr_ID: NZ_CP019487_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019487_2

998689-998793

Orphan

Consensus_repeat	Method
TCGGCGGCGGCGGCGGTGCGGGCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019487_2

>merge|NZ_CP019487|2|998689-998793|CRISPRCasFinder
TCGGCGGCGGCGGCGGCGTCGGCGGCGCCGGAAGCAGCACGGCCGCCGAAAAAGAGCACAGCCACACGATCGATCTCGTCGTCGGCGGCAGCGGCGGTGTCGGCG

>NZ_CP019487|2|3|998689-998793|CRISPRCasFinder
TCGGCGGCGGCGGCGGCGTCGGCGGCG	CCGGAAGCAGCACGGCCGCCGAAAAAGAGCACAGCCACACGATCGATCTCG
TCGTCGGCGGCAGCGGCGGTGTCGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019487.1\|WP_010975822.1\|980264_981539_+\|phosphonoacetate-hydrolase	unknown	unknown	gnl\|CDD\|131388
NZ_CP019487.1\|WP_095919496.1\|1002392_1003634_+\|YeeE/YedE-family-protein	unknown	unknown	gnl\|CDD\|377230
NZ_CP019487.1\|WP_157749146.1\|1013448_1014699_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|236724
NZ_CP019487.1\|WP_015243022.1\|988217_991556_+\|RTX-toxins-related-Ca2+-binding-protein	unknown	unknown	gnl\|CDD\|225483
NZ_CP019487.1\|WP_088194952.1\|1012265_1013156_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP019487.1\|WP_014527141.1\|985990_988033_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP019487.1\|WP_088194950.1\|1006274_1006463_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_074853281.1\|994180_994573_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_010975829.1\|991681_992080_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_014527139.1\|992168_992951_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP019487.1\|WP_010975834.1\|1001395_1002313_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP019487.1\|WP_080591489.1\|1003658_1004585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_014527142.1\|984821_985985_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP019487.1\|WP_080591487.1\|1005459_1006002_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019487.1\|WP_010975842.1\|1011442_1012066_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP019487.1\|WP_014527143.1\|983709_984732_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP019487.1\|WP_014527138.1\|992938_994090_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019487.1\|WP_095919498.1\|1004753_1005257_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP019487.1\|WP_088195194.1\|1006438_1008220_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|179625
NZ_CP019487.1\|WP_014527144.1\|981535_982993_+\|phosphonoacetaldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|132294

Protein	Function_ID	Function_description	E-value
NZ_CP019487.1\|WP_010975822.1\|980264_981539_+\|phosphonoacetate-hydrolase	gnl\|CDD\|131388	TIGR02335, phosphonoacetate_hydrolase, phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.	1.66756e-171
NZ_CP019487.1\|WP_095919496.1\|1002392_1003634_+\|YeeE/YedE-family-protein	gnl\|CDD\|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	1.87845e-67
NZ_CP019487.1\|WP_015243022.1\|988217_991556_+\|RTX-toxins-related-Ca2+-binding-protein	gnl\|CDD\|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.62449e-24
NZ_CP019487.1\|WP_088194952.1\|1012265_1013156_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.50422e-30
NZ_CP019487.1\|WP_014527141.1\|985990_988033_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019487.1\|WP_010975842.1\|1011442_1012066_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.51434e-78
NZ_CP019487.1\|WP_014527139.1\|992168_992951_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.45864e-66
NZ_CP019487.1\|WP_010975834.1\|1001395_1002313_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.53138e-90
NZ_CP019487.1\|WP_157749146.1\|1013448_1014699_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|236724	PRK10604, PRK10604, sensor protein RstB; Provisional.	9.05431e-52
NZ_CP019487.1\|WP_014527142.1\|984821_985985_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019487.1\|WP_088195194.1\|1006438_1008220_+\|potassium-transporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	1.80518e-170
NZ_CP019487.1\|WP_014527143.1\|983709_984732_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP019487.1\|WP_014527138.1\|992938_994090_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	4.76279e-171
NZ_CP019487.1\|WP_095919498.1\|1004753_1005257_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.20481e-16
NZ_CP019487.1\|WP_014527144.1\|981535_982993_+\|phosphonoacetaldehyde-dehydrogenase	gnl\|CDD\|132294	TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase. This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.	0

>NZ_CP019487.1|WP_074853281.1|994180_994573_+|hypothetical-protein
MRGGRIINTYKESHIQRVAHSHVEHGGARFAAVCRCMSAIFRGDTSDEARHQNQESPAEVFAGSIRTRRPSCVSVRAEHVAFFDRAGRRARRGGPGRRGVCGLQWKCNPDDRPGRLWIHMVGLLGRQWCR
>NZ_CP019487.1|WP_014527138.1|992938_994090_-|sensor-histidine-kinase
MVVIAEPDLLPDLSGSHIADPSYRRSRTKRKFNGSGTVLVGALGSFWRAQTAGWLFGALFAVVSRILAFEDVAFAFALTAVLEPLGFALTTLAYRIFRHRIGGVTLTVVAVALALSIAGGVLQMLIANAMKDVLQPNIDPDYGANGSVIPAIYYTLIFLGWSLAYLWIKADADARKQRMRRHRAREEALRAELHQLRLQLDSHFLFNVLNTVAMEIPEEPDTALEMIHRITAYLRYLLENQTRRICPLSDEIEAMMAYIRIQELRFEGRLDCVVEVDPAARPVAVPHLILQPLVENAVKHGLRSPASRFAVGITVECRDADLFIEISNPGRLEAGERDRPPIGLANIRRRLELHYPLGHALTLIQAGDKVIARLMLRGAACYA
>NZ_CP019487.1|WP_014527139.1|992168_992951_-|response-regulator-transcription-factor
MLRVMVVDDEPPARRGLKRLMQAHPDVEVVGEAGSLDQAHQLTHALRPDAIFLDIDLGDDDGFGLIKRLDQVPAIVFVTGHGTYAPQAFDVAALDFLLKPVERQRLALTLERLRRYRHALELGGKVLDDTATVLPVVMPGRRRLHIRMAGQTLVLPTDGIAMLAAEADFTRIVMADARDHLVCRLLGQFDAELPTPPFFRVSRSLIINLDRVVRVRSQDKGRSLLSLGRSLTPIMLGRVATTRLRRALDGFQRVGTVPDG
>NZ_CP019487.1|WP_010975829.1|991681_992080_+|hypothetical-protein
MKRPTNRRTVLMTAGAAAVAAVAGPVAAQSPDIRGAVTFEGGAVPEGHLEIYLEDPAIQDEARRRATETRIKSDGTSTSIAFSLSPPASVNASPTLRIVARLERADGWLVARGSTRFEAGSPVYVTLNPVMY
>NZ_CP019487.1|WP_015243022.1|988217_991556_+|RTX-toxins-related-Ca2+-binding-protein
MPNPSQTSDNWWINDQTPDNPYGKSEDYESFLDYLGALPRSLTPEMAAGTLRINVYELNDHPEYKAAAIGALQMWASVTPLKFEIVDDTPFDSTTDWMEVVSPELGEEDDGSAYSSNRYVSIGQRFHDTEPNKTDIGGYVFDSFIHEFGHEFGLNHPGLYNYSGPGGVQINYLNNATWTYDRQQYSVMSYFDGIDVGETSRWSASTPLMADIEAVIRRFFSTVDENGVRTYQHIDLNTGDNVYGFGSTQYGYQLTSSGMQHDIGFAIHDTGGVDTIDFSGSTAGTILDLRAGQFSSVNGHSNNVSIFAGHNADAADYYIETGIGSRFDDILIGNDGANTLDGRSGGDRMAGNGGDDTYFVDSLEDIVREEANGGNDTVILLSRNLKIRKIANVENIIYADESTTQPGGGGASPPIAGDNTMTSIIFGGNGNDTLDGGAGDDTIFGKGGDDLIIGGRDSLASRDINNTIDVEDLEDQTESDDGNDTLYGGGGNDTILGGQGNDILDGGAGDDVLSGQDGVDIFRGGAGVDTVDFSKESPFQLLVNLATNVASGGTASGDTFHSIENLIGSDDRIDRFIGTSAANHFWGQGGGDYFNGGGGNDILDGGNDGDILYGEAGNDTVIGGAGQDYLDGGSGIDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVGRGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDTADYADATSGVRLSLAGGRSGGDTYVSIENLAGSGFGDRLTGNGAANVLTGQGGNDTIDGGRGDDTLLGDFAYQGDAPPRPGMGSGYATLGPDAANNSIAAAFDISNNFSLTSDPDIFDSTTILHTTVNATGNGRGGYYKIDLAAGTVITIDIDGIADPNVHDSWVRLLDSAGNIVAQNDDGGGDPGSTSNRDSSLVFVAQETGTYYILEGSWSPTAPGDGWAEAVPAGSTYELNVSVEFPPQPAQPGVAGSDTLIGGGGSDLLDGGLAADTLTGGAGEDTFRFSTALGNGNVDWIKDFNVIDDTILLDNLIFESVGGEGALALGAFYGSAGGVAHDADDRIIYDADSGVLSYDADGAGEIAAIQYAQLSTNLKLSAADFIII
>NZ_CP019487.1|WP_014527141.1|985990_988033_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MTLAVDFLPPGRAVRQQISGDDWLKRAVMLVVGIYLVVALALPLFVMLSKSFSTYTFDLHQFEFQVSDQSGQGWSDPVTAAALNAAVAAFPESDLKASADGRLQAAKLFPDFSFRSPVRYRIRGTSDETHFLAGSQLVRGTEWQEYDSNNFRRVMLRPSRSIGLSNFAEYFSTPSLVRSIKNSVTMALISTAVTLVVAFGLAYALNRSRMPGKGLFKLIVTIPILVPSLLPGIALVYLFGNQGVFRDLLLGHSIYGPLGIVVGSVFFTLPHAFLIISTALWVADARHYEAATSLRASKWRTFWTVTVPGARYGLISAAFVVFTLVITDFGLPKVIGGQYGMLAVDIYKQVIGQQNFEMGAVVSVILLVPAFLAFAVDRLTQRRQVALLSARAVPYEPKPRRGFDAACFAFCTLVAVFVLGMIGMCQVAALVKFWPYDLSLSLRNYAFDLMDGGGWDSYYNSIRLALMTAVIGSLIVFTGAYMVEKTKGFGLGRATFHMLAMLPMAVPGMVLGLAYIFFFNSAANPLHGIYGTMTILVLCTVTHFYTVAHLTALTALKQLDPEFEAVAGSLKIPFYKLFFRVTLPVCLPAVLEIAIYLFVNAMTTVSAVVFLYATDTKLASVAILNMDDAGDIAPAAAMGMMIFYTNVAAKLLHAFVSRLLLARTQGWRRVSQSAAATVPH
>NZ_CP019487.1|WP_014527142.1|984821_985985_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MKHATAPAEPAMPASATRQIEGRPFLEIDGLWKAYGDFVALRDIDLQVKEGEFICFLGPSGCGKTTLLRAIAGLDIQSRGTICQGGQDISRLPPAQRDYGIVFQSYALFPNLTIEKNIAFGLENIGRPRREIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHPKTLFVADFIGETNQFPATVGKGAQVEIGHTRFACAEHRLPSGASVVAAVRPADIIPHGAAAHRATGLDAVGNADNLIDAHVEDMEFLGMFWRTRLSAPRLKEKALVADFSTNAVRRLSIEIGSAIQVEIPQERLLLFAKA
>NZ_CP019487.1|WP_014527143.1|983709_984732_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MPFSKIFLGAGTALILASSAAYAETELTVYTSIEAVDLDRYKETFKKAHPDIKINWVRDSTGVMTAKLLAEKDNPQADVVWGVAATSLLLLKSEGMLEPYSPKNVEALDPRFVDGDKPPSWVGMDAYVAALCYNTVEAGKLGLTPPTSWKDLTKPEYKGHVVMPNPNSSGTGFLDVSAWLQTFGEEEAWSFMDALHENIAAYTHSGSKPCKMAASGETVIGVSFEFPGAKAKTSGAPIDIIFPSEGSGWEAEATAIIAGTANLEAAKTLVDWSISKEANEMYNVGYAVVAYPGVAKPIENLPDDVADKMIKNDFEWAANNRARILKEWQKRYDAKSEPKS
>NZ_CP019487.1|WP_014527144.1|981535_982993_+|phosphonoacetaldehyde-dehydrogenase
MTKAEVIIAVRHEPMRIAGRLVDTDDRVEVRYPWNDTVVGTVPAGRAEHAREAFAIAAAYQPKLTRYERQKILLATAEALAARKEEISDVITLELGISKADSLYEVGRAFDVFTLAGQMCIRDDGEIFSCDLTPHGKARKIFTMREPLTAISAITPFNHPLNMVAHKVAPAIATNNCVVVKPTELTPMTALLLADILYEAGLPPEMLSVVTGWPADIGMEMITNPHVDLVTFTGSVPVGKLIAANAHYKRQVLELGGNDPLIILNDLSDDDLARAADLAVAGATKNSGQRCTAVKRILCQESVADRFVPLVLERAKRLRFGDPMDRSTDLGTVIHEKAAALFEERVMRAAEEGADILYHPGRSGALLPPIVVDRVPHQSDLVLEETFGPIIPIVRVPDDDDATITLSNSTAFGLSSGVCTNDYRRMQKYIAGLKVGTVNIWEVPGYRIEMSPFGGIKDSGNGYKEGVIEAMKSFTNVKTFSLPWP
>NZ_CP019487.1|WP_010975822.1|980264_981539_+|phosphonoacetate-hydrolase
MNQMSKISVTVNGRRYPWPRVPAIAVCLDGCEPAYLDAAIDAGLMPALKRIKERGAVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDIMYLTTTDYVQHKYAPGVPEANSFYEMFDRYLAELDGLGAAIVVTADHGMKPKHKADGSPDVIYVQDLLDEWLGKDAARVILPITDPYVVHHGALGSFATAYLPDGCDRSEIMARLKAIQGVDVVLGREEACRRFELPEDRIGDIVLVSSENKTLGTSEHRHDLAALDEPLRSHGGLTEQEVPFIVNRVLPELPNAPRLRNFDAFFYAVTAAAEAGAEGGL
>NZ_CP019487.1|WP_010975834.1|1001395_1002313_+|sulfurtransferase
MKMRIASLAFTLSVLASSALAADISPLVDAEWVKANAGDKDVVILDIRDKVAETELGDKPYIQGAVVAPYASAGWRTEVGGVPGMLPPLEQITKLIGDLGIDNDDHVVIVPWGTDSTEFGGATRVYWTFKYLGHEEVSILDGGWRQYDAAGGTRSAEAVKPEPATFHAEPQEKLLATTEEVAAALKAGVKLIDGRPAEQHQGKSKSPVVRANGTIPGSINIEHSKLYSQDHALFARPETVKALTEAAGLAAEEENITFCNTGHWASVTWFALSEVLGNKNTTMYDGSMAEWTADPARPVENKSGT
>NZ_CP019487.1|WP_095919496.1|1002392_1003634_+|YeeE/YedE-family-protein
MPHRRRDFEMTDISFDRSRYLPSAVVDRRPALVAGGALLIGLLVIAQLIDLRQAALFVVGGLLGVALYHGSFGFTGGWRRMVVERRGRGIRAQMLMIGVAALAMIPLISAGSLGGQPLVGALAPVGVSVLVGAAMFGLGMQLGGGCGSGTLFTVGGGSARMLVTLTFFIVGALIGSAHLPWWLTLPSFGTIDLGRQLGTGTAILATLAGLGLVALATALIERRAHGNIEREPEPSRPGWTWLLYGPWPLVGAGLLMALLNVATLLLAGHPWSVTFGFGLWGAKAAQAVGVPVATWEFWNWPGPQAALSASVLADVTSVMNFGIVLGAAAAASLAGKFAPKAKIPLGSMLAAVVGGLLMGYGARLSFGCNIGALFSGIASGSLHGWLWFATAFVGSFVGIWMRPLFGLDGFKKK
>NZ_CP019487.1|WP_080591489.1|1003658_1004585_+|hypothetical-protein
MQRWRRRPPLWQSITTIIPFRAPSQQRPPVRQEGQHPVPQVPRAPLPRRAPPALRSQHHLHRPRQCPLCLVPPGRPQRQWHPSSRLRRRRLPCRPRGRSFRRLRRPLPCRYREMTEEAVELARREIAYCETLLAKGGLNVLSETFRDTAEIKAWDHYPTGDVFDPTSGAQWFYHCHPAEEGAEEHGHFHCFLRPQGPQGPIHHLAAVGVDAHGRLLRLFTVNQWVVGDDWLGAEGTIALLPRFDVQMPRPSYLVNRWLTAIFTAYEQQITELIRERDRTLLAHRQPESVEARQDRALEVTSEFKLSGR
>NZ_CP019487.1|WP_095919498.1|1004753_1005257_+|GNAT-family-N-acetyltransferase
MIEFRSLTEADFLMLCEWLNSPHMRAHYQKTPITIEEVQGKYSERLSPSHPTHCHIARYNGEPFGMLQCYSLRNYPDFASEIGEQDGVAVDLFIGEERFIGKGFGKAMLRSYVLNVVPSIFPQDCNICHAKENKIAIRGSLSAGFLPYRDVIERGVESLLLSFDRPI
>NZ_CP019487.1|WP_080591487.1|1005459_1006002_+|hypothetical-protein
MVHPAKICLGTHDRVVQILLPSEHLVVIEIAPVEQIKGDAFEAAIPSFRRSARPSVRVVCQQSAPKRVAVVVESDYAVGHENMVTGEAFAGDDALGIKSGKGCLAQKHTGENGIRAISEEDAVRQSPAPHRVLFYAGLQRVQGRCTIKTESATISVVDDHCRVNQMIKCLRKEQNQLDVP
>NZ_CP019487.1|WP_088194950.1|1006274_1006463_+|hypothetical-protein
MGLIAMSERDLQRIEVLSQVIELDSKQVEWKDVRASTVAGAALRGARHLEIRSETWLLSPTA
>NZ_CP019487.1|WP_088195194.1|1006438_1008220_+|potassium-transporter
MAAESHGIDLLPVIALLGAAVVAAPLFKRIGLGSVLGYLAAGIAIGPFGLRLLQEPSSILHVAELGVVMFLFIIGLEMRPSRLWGLRREIFGLGIVQVALCAILLTGVGVLTGFPVAPSFVAGAGFVLTSTAIVMQLLEERREMAAPKGQRIVSILLVEDMAIVPLLALVAFLAPIVPGSVAASGGIDWLSIAIGLVTIAGLVLAGRYLLNPLFGLIASVEAREVMTAAALMVVLGSAYVMQLGGLSMAMGAFLAGVLLSESTFRHQLEADVEPFRGILLGLFFLAVGMSLDLGVIARNWAMILFYVAAYMVVKAIVIYLVARLFRASNWEAIERAVFMAQGGEFAFVLYAAALGTGIISSEENAILTAIIIVSMMVTPLLIAALRLVERKIPLSTDGVERPENLSGNVLIIGFGRVGQIVSQVLLTRGHVISIIDTDVEMINTAREFDFKVYYGDGKRLDILHAAGAERASAIVVCVDKADDATKIVELIKAEFPLIPVLARASDRRHALDLITAGADFHIRETFESSLVLGQKALEALGADLPEVAEIIEKVRQRDEKRLELELVGGLYAGRPLFSGKLEPVEAVPPGGSA
>NZ_CP019487.1|WP_010975842.1|1011442_1012066_-|(2Fe-2S)-binding-protein
MTDETAELHPPGLTMSRREALQATAGAVAFAALPLPAEAAADSTATPAPPTHTLPLEVTVNGRVHQLVVDPRLSVLDMLRERLSLTGTKKGCNQGACGACTVLIDGQRVNACLALAVMYDGAKITTIEGVAEGEALHPLQVAFIEHDAFQCGYCTSGQIMSGLGCISEGHASSAEEISYWMSGNICRCGAYPGIVAAVAQAAKEDRT
>NZ_CP019487.1|WP_088194952.1|1012265_1013156_-|helix-turn-helix-transcriptional-regulator
MGGKALADTTAHIRRLQRGLSPPVVAEVFSDDTRLVGRWWNKPFEYDLPPLKDHVLSAKYSGQGMASVKIGGQTISAPAAMGTITLAPRGHGGFWRADGHVEVSNIFLGHKRLLASADQVGNGREPELLDRVNFSDPKLFTIMALINDEINSGDAISHLYIDQLLDLVCLQLLRAHSATSMPISPGPQRGLSGWQVKRVTGYMRENMAEDIRIQELADLVNLSRFHFCTAFRMATGQTPYGWLTRQRIAYAKTLLRDMKLRVNDIALAVGYETQSAFAASFRKAVGITPTEFRRRL
>NZ_CP019487.1|WP_157749146.1|1013448_1014699_-|HAMP-domain-containing-histidine-kinase
MRSRLFLKIYLTLLASLAAVAVASAAFVWLGQGEEESGWQSQRARFVAALIPPDMDNRTVEATIERFSRAFGADIAVYDPRGRLIASVGRPLPRDILDQPWRHGPGNFHTMVTELPDGRTVAARMERPLRPSGRNPLAYLALIAGVIGLAAYPVVRHLTRRLERLRVGVDAWGSGDFVARVPEDGSDEVAAVAKSFNRAADQVERLIKSHRALLANASHELRSPLARLRMAIDLYEQAPNDDRKQEIIRNLSELDTLIEEILLASRLDHVEKLDALESVDLLALVLEEGARNDVEVSGMPATVAGDARLLRRLVRNLLQNALHHGGPPVTAAVAQADGAAILRVRDHGPGIADSERHRVFEPFYRPSGRSEAAGGWGLGLALVRQIAERHGGGVRYESPPDGGACFVVTLPSKATL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651661-651708	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085079-1085126	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1053905-1053952	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636655-636702	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151301-1151348	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233702-233749	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644720-644767	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634529-634576	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	655818-655865	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302457-1302504	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895953-896000	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772699-772746	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558706-558753	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292156-292203	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423320-1423367	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373071-373118	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795261-795308	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658334-658381	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225658-1225705	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998341-998388	0	1.0
NZ_CP019487_1	1.1\|998341\|48\|NZ_CP019487\|PILER-CR,CRISPRCasFinder	998341-998388	48	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085084-1085131	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054100-1054144	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656013-656057	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772894-772938	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292351-292395	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225853-1225897	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998536-998580	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651469-651513	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636463-636507	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233510-233554	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644528-644572	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558514-558558	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658142-658186	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085274-1085300	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054100-1054126	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151496-1151522	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656013-656039	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772894-772920	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292351-292377	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373266-373292	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225853-1225879	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998536-998562	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085279-1085305	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651487-651513	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636481-636507	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233528-233554	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644546-644572	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634355-634381	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302283-1302309	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895779-895805	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558532-558558	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423146-1423172	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795087-795113	0	1.0
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658160-658186	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651283-651333	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636277-636327	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233324-233374	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644342-644392	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634151-634201	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302079-1302129	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895575-895625	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558328-558378	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422942-1422992	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794883-794933	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657956-658006	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085454-1085504	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151676-1151726	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773074-773124	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292531-292581	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373446-373496	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1226033-1226083	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998716-998766	0	1.0
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085459-1085509	0	1.0
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085274-1085318	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151496-1151540	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373266-373310	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085279-1085323	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634337-634381	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302265-1302309	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895761-895805	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423128-1423172	1	0.978
NZ_CP019487_1	1.3\|998536\|45\|NZ_CP019487\|PILER-CR	998536-998580	45	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795069-795113	1	0.978
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054280-1054330	1	0.98
NZ_CP019487_2	2.1\|998716\|51\|NZ_CP019487\|CRISPRCasFinder	998716-998766	51	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656190-656240	1	0.98
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	778651-778677	5	0.815
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	405901-405927	5	0.815
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP049043	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_6, complete sequence	43383-43409	5	0.815
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	MN585980	Microbacterium phage Gina, complete genome	24050-24076	5	0.815
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	MN586059	Microbacterium phage Teamocil, complete genome	24149-24175	5	0.815
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	341978-342004	6	0.778
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	339070-339096	6	0.778
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	345316-345342	6	0.778
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	353491-353517	6	0.778
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	339070-339096	6	0.778
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	562461-562487	6	0.778
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	MK279840	Mycobacterium phage JacoRen57, complete genome	26434-26460	7	0.741
NZ_CP019487_1	1.4\|998536\|27\|NZ_CP019487\|CRISPRCasFinder	998536-998562	27	NZ_CP015090	Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence	75369-75395	7	0.741
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651541-651633	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085154-1085246	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1053980-1054072	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636535-636627	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151376-1151468	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233582-233674	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644600-644692	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634409-634501	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	655893-655985	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302337-1302429	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895833-895925	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	772774-772866	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558586-558678	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292231-292323	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1423200-1423292	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373146-373238	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	795141-795233	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	658214-658306	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1225733-1225825	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998416-998508	33	0.645
NZ_CP019487_1	1.2\|998416\|93\|NZ_CP019487\|PILER-CR	998416-998508	93	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085159-1085251	33	0.645

1. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

2. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

3. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

4. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

5. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

6. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

7. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

8. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

9. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

10. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

11. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

12. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

13. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

14. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

15. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

16. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

17. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

18. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

19. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

20. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

21. spacer 1.1|998341|48|NZ_CP019487|PILER-CR,CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	CRISPR spacer
cctccaccgcgtccggcagccaggcgacggccaacatcaccgtcggtg	Protospacer
************************************************

22. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

23. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

24. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

25. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

26. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

27. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

28. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

29. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

30. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

31. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

32. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

33. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	Protospacer
*********************************************

34. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

35. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

36. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

37. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

38. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

39. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

40. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

41. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

42. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

43. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

44. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

45. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

46. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

47. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

48. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

49. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

50. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

51. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

52. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

53. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

54. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

acggttccgacgaggcggcgggcagga	CRISPR spacer
acggttccgacgaggcggcgggcagga	Protospacer
***************************

55. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

56. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

57. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

58. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

59. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

60. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

61. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

62. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

63. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

64. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

65. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

66. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

67. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

68. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

69. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

70. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

71. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

72. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

73. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 0, identity: 1.0

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	Protospacer
***************************************************

74. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

75. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

76. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

77. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

78. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

79. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

80. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

81. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

82. spacer 1.3|998536|45|NZ_CP019487|PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.978

acggttccgacgaggcggcgggcaggatcaccgtcgggggcggct	CRISPR spacer
acggttccgacgaggcggcgggcaggatcaccgtcggcggcggct	Protospacer
************************************* *******

83. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 1, identity: 0.98

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagtacagccacacgatcgatctcg	Protospacer
*****************************.*********************

84. spacer 2.1|998716|51|NZ_CP019487|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 1, identity: 0.98

ccggaagcagcacggccgccgaaaaagagcacagccacacgatcgatctcg	CRISPR spacer
ccggaagcagcacggccgccgaaaaagagtacagccacacgatcgatctcg	Protospacer
*****************************.*********************

85. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
tggaatccgacgaggcggcgggcacga	Protospacer
  *. ******************* **

86. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
cggcttccggcgtggcggcgggcagga	Protospacer
  * *****.** **************

87. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP049043 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_6, complete sequence) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
gccgttccgagaaggcggcgggcaggt	Protospacer
.* ******* .**************

88. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to MN585980 (Microbacterium phage Gina, complete genome) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
gcggctccgtcgaggcggcgggcacca	Protospacer
.***.**** **************  *

89. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to MN586059 (Microbacterium phage Teamocil, complete genome) position: , mismatch: 5, identity: 0.815

acggttccgacgaggcggcgggcagga	CRISPR spacer
gcggctccgtcgaggcggcgggcacca	Protospacer
.***.**** **************  *

90. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

91. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

92. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

93. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

94. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

95. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 6, identity: 0.778

acggttccgacgaggcggcgggcagga	CRISPR spacer
tcggtttcgccgaggcggcgggcaaat	Protospacer
 *****.** **************..

96. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to MK279840 (Mycobacterium phage JacoRen57, complete genome) position: , mismatch: 7, identity: 0.741

acggttccgacgaggcggcgggcagga	CRISPR spacer
gtacgcccgacgaggcggcggtcagga	Protospacer
...  .*************** *****

97. spacer 1.4|998536|27|NZ_CP019487|CRISPRCasFinder matches to NZ_CP015090 (Pelagibaca abyssi strain JLT2014 plasmid pPABY2, complete sequence) position: , mismatch: 7, identity: 0.741

acggttccgacgaggcggcgggcagga	CRISPR spacer
ttggttccggcgaggcggcgggcgtag	Protospacer
 .*******.*************. ..

98. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

99. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

100. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

101. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

102. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

103. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

104. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

105. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

106. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

107. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

108. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

109. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

110. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

111. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

112. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

113. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

114. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

115. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

116. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

117. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

118. spacer 1.2|998416|93|NZ_CP019487|PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 33, identity: 0.645

atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	CRISPR spacer
atggcggcgcggtcggcatcaccttcgacgataaccatggcaacagcatcagcaccgcgg	Protospacer
************************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019488

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019486

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP019487

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection