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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023389 Escherichia coli strain 1105 plasmid p74, complete sequence 0 crisprs DEDDh 0 0 0 0
NZ_CP023388 Escherichia coli strain 1105 chromosome, complete genome 6 crisprs RT,cas3,PD-DExK,WYL,csa3,DEDDh,DinG,cas14j 0 4 5 0

Results visualization

1. NZ_CP023388
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023388_1 1826124-1826237 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023388_2 2048788-2048924 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023388_3 2445567-2445690 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023388_4 3162638-3162729 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023388_5 4361243-4361382 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023388_6 4659164-4659292 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP023388_4 4.1|3162664|40|NZ_CP023388|CRISPRCasFinder 3162664-3162703 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP023388_3 3.1|2445610|38|NZ_CP023388|CRISPRCasFinder 2445610-2445647 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229387-229441 8 0.855
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239881-239935 8 0.855
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230793-230847 8 0.855
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211763-211817 8 0.855
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229185-229239 9 0.836
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239679-239733 9 0.836
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230591-230645 9 0.836
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211561-211615 9 0.836
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40382-40436 10 0.818
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229286-229340 10 0.818
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239780-239834 10 0.818
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230692-230746 10 0.818
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211662-211716 10 0.818
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14098-14152 10 0.818
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12113-12164 10 0.808
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 272-323 10 0.808
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31252-31303 10 0.808
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229084-229138 11 0.8
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239578-239632 11 0.8
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230490-230544 11 0.8
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211460-211514 11 0.8
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4115-4166 11 0.788
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4114-4165 11 0.788
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4114-4165 11 0.788
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4114-4165 11 0.788
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 152-203 11 0.788
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208982-209033 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 44-95 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219476-219527 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 43-94 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18332-18383 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210310-210361 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 43-94 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191265-191316 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 43-94 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7393-7444 12 0.769
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84217-84268 12 0.769
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 137974-138028 13 0.764
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7435-7489 13 0.764
NZ_CP023388_2 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder 2048829-2048883 55 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84259-84313 13 0.764
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3373-3424 13 0.75
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3372-3423 13 0.75
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15000-15051 13 0.75
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3372-3423 13 0.75
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3372-3423 13 0.75
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 70-121 14 0.731
NZ_CP023388_5 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder 4361287-4361338 52 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30159-30210 14 0.731

1. spacer 4.1|3162664|40|NZ_CP023388|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

2. spacer 3.1|2445610|38|NZ_CP023388|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.855

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtaaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ************************************* *   *** ****   

4. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.855

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtaaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ************************************* *   *** ****   

5. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.855

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtaaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ************************************* *   *** ****   

6. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.855

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtaaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ************************************* *   *** ****   

7. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.836

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ***************.********************* *   *** ****   

8. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.836

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ***************.********************* *   *** ****   

9. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.836

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ***************.********************* *   *** ****   

10. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.836

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgcgggaat	Protospacer
 .** ***************.********************* *   *** ****   

11. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.818

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg	CRISPR spacer
ctttttgccggatgcggcgtaaacgccttatccggcctacggtttggtgcgagtg	Protospacer
**   ***************************************. . **  * *

12. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.818

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacgggt---ggcgcgagaat	Protospacer
 .** ***************.********************* *   *** **.*   

13. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.818

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacgggt---ggcgcgagaat	Protospacer
 .** ***************.********************* *   *** **.*   

14. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.818

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacgggt---ggcgcgagaat	Protospacer
 .** ***************.********************* *   *** **.*   

15. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.818

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacgggt---ggcgcgagaat	Protospacer
 .** ***************.********************* *   *** **.*   

16. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.818

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
ttgattgccggatgcggcgtaaacgccttatccggcctaca---ttcggcaagggtta	Protospacer
.*** ***********************************.   .* ***  ***   

17. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.808

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
acgggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccga	Protospacer
.*.   .*********************** *****************  * 

18. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 10, identity: 0.808

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggtaacg-gtttgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
 *.* .* ..*.*************************************  * 

19. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.808

--gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
tggcaacgg--ctgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
  *** .*.  ..*************************************  * 

20. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.8

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgtgagaat	Protospacer
 .** ***************.********************* *   *** .*.*   

21. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.8

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgtgagaat	Protospacer
 .** ***************.********************* *   *** .*.*   

22. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.8

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgtgagaat	Protospacer
 .** ***************.********************* *   *** .*.*   

23. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.8

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg---	CRISPR spacer
acgactgccggatgcggcgtgaacgccttatccggcctacggat---ggcgtgagaat	Protospacer
 .** ***************.********************* *   *** .*.*   

24. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************    

25. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************    

26. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************    

27. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggcac-aagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctg	Protospacer
 **** .*..*.****** ************ *****************    

28. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.788

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
gctcgggtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaa	Protospacer
** * *. ** ******************* ****************   . 

29. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************    

30. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  . 

31. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************    

32. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  . 

33. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  . 

34. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************    

35. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  . 

36. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

----gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ******************* *****************    

37. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

-gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
cgtac-agatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
 *.** ..*.*.****** ************ *****************  . 

38. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 12, identity: 0.769

---gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
agtgcagt---tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccg	Protospacer
   *** *   .*.****** ************ *****************    

39. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 12, identity: 0.769

---gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
agtgcagt---tttgtaggcatgataagacgcgccagcgtcgcatcaggcatccg	Protospacer
   *** *   .*.****** ************ *****************    

40. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 13, identity: 0.764

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg	CRISPR spacer
atgactgccggatgcggcgtaaacgctttatccggcctacattcgtgctcccgta	Protospacer
 *** *********************.*************. *. *.  *.** .

41. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 13, identity: 0.764

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg--	CRISPR spacer
acaattgccggatgcggcgtgaacgccttatccggcctacggt--tgagtgcagttt	Protospacer
 ..* ***************.**********************  *..*. *.*   

42. spacer 2.1|2048829|55|NZ_CP023388|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 13, identity: 0.764

ctgaatgccggatgcggcgtaaacgccttatccggcctacggttctaggctcggg--	CRISPR spacer
acaattgccggatgcggcgtgaacgccttatccggcctacggt--tgagtgcagttt	Protospacer
 ..* ***************.**********************  *..*. *.*   

43. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************    

44. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************    

45. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************    

46. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************    

47. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ttcgcgggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctg	Protospacer
 .  .*..********* ************ *****************    

48. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 14, identity: 0.731

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggttcaggtccgtaggcatgataagacgcgtcagcgtcgcatcaggcatcgg	Protospacer
*  .......******* ************ *****************  * 

49. spacer 5.1|4361287|52|NZ_CP023388|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 14, identity: 0.731

gcactgaactcgtaggcctgataagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
gggtgcagattgtaggcatgataagacgcgtcagcgtcgcatcaggcatcag	Protospacer
* ..  *. *.****** ************ *****************  . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1332884 : 1340024 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_2 1951033 : 1960478 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_3 2884069 : 2929881 71 Enterobacteria_phage(50.77%) lysis,head,protease,terminase,portal,integrase,tail,capsid attL 2902938:2902952|attR 2934006:2934020
DBSCAN-SWA_4 3269338 : 3357518 90 Salmonella_phage(61.82%) lysis,plate,protease,head,terminase,portal,integrase,tail,capsid,tRNA attL 3321889:3321914|attR 3357593:3357618
DBSCAN-SWA_5 4493335 : 4554191 45 Enterobacteria_phage(16.67%) transposase,plate,integrase attL 4489155:4489169|attR 4509206:4509220
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage