CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP023378	Escherichia coli strain 127 plasmid p123, complete sequence	0 crisprs	NA	0	1
NZ_CP023381	Escherichia coli strain 127 plasmid p91, complete sequence	0 crisprs	NA	0	1
NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	1 crisprs	NA	2	0
NZ_CP023382	Escherichia coli strain 127 plasmid p95, complete sequence	0 crisprs	NA	0	0
NZ_CP023377	Escherichia coli strain 127 chromosome, complete genome	9 crisprs	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG	22	12
NZ_CP023379	Escherichia coli strain 127 plasmid p39, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10978 : 56574

Escherichia_phage(35.71%)

integrase,transposase,protease

attL 9683:9697|attR 64705:64719

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
9683:9697	attL	NA	NA	NA	NA
WP_000156883.1\|10978_12001_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000083821.1\|12405_12663_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_001365705.1\|12898_12973_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_000130948.1\|12965_13823_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_000616807.1\|14761_15415_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000557619.1\|15507_15765_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_001398199.1\|15697_16099_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_001067855.1\|17409_18114_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000376616.1\|18313_18517_-	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|18644_19484_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|19477_19825_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000503573.1\|20030_20819_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
WP_001389366.1\|20949_21423_-	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IAU3	Erwinia_phage	1.3e-16	34.6
WP_001067855.1\|22325_23030_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|23219_24035_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|24185_24890_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000480968.1\|24950_25787_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|25786_26590_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_001043265.1\|26650_27466_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	3.5e-09	27.6
WP_000240536.1\|27773_28625_-	replication protein	NA	NA	NA	NA
WP_001067855.1\|29380_30085_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000134999.1\|31044_31686_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000147567.1\|32258_32819_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_001138064.1\|32821_35788_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000656305.1\|35854_36232_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000412211.1\|36432_37092_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_032156742.1\|39349_39475_+	hypothetical protein	NA	NA	NA	NA
WP_001066942.1\|39595_40336_+\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6
WP_096038024.1\|40620_41598_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.1e-99	58.9
WP_000246636.1\|44884_45880_-	hypothetical protein	NA	NA	NA	NA
WP_000350635.1\|46344_48483_+	AAA family ATPase	NA	NA	NA	NA
WP_001044768.1\|48644_49061_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001261287.1\|49057_49288_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001553851.1\|49594_52714_+	hypothetical protein	NA	NA	NA	NA
WP_000545983.1\|52976_54110_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_000642771.1\|54129_54414_+	hypothetical protein	NA	NA	NA	NA
WP_000215657.1\|54410_54608_-	hypothetical protein	NA	NA	NA	NA
WP_000813634.1\|55241_55460_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_001159868.1\|55461_55767_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_000016982.1\|55767_56574_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.8e-57	100.0
64705:64719	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023380

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023380_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023380_1

15376-15515

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP023380_1

>merge|NZ_CP023380|1|15376-15515|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP023380|1|1|15376-15515|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023380.1\|WP_001215682.1\|20794_21289_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NZ_CP023380.1\|WP_000647576.1\|21285_21594_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023380.1\|WP_001290043.1\|21696_21936_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023380.1\|WP_001278241.1\|9624_10521_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|334163
NZ_CP023380.1\|WP_000071896.1\|13608_14145_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP023380.1\|WP_001293142.1\|16529_16994_-\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|182858
NZ_CP023380.1\|WP_001339197.1\|12091_13300_-\|IS4-like-element-ISVsa5-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP023380.1\|WP_000704156.1\|10846_11371_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181
NZ_CP023380.1\|WP_001353740.1\|14773_15013_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP023380.1\|WP_063864887.1\|7240_8101_+\|class-A-beta-lactamase-TEM-190	unknown	unknown	gnl\|CDD\|185339
NZ_CP023380.1\|WP_000497519.1\|14259_14586_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP023380.1\|WP_000147047.1\|21990_22296_-\|IncN-plasmid-KikA-protein	unknown	unknown	gnl\|CDD\|369359
NZ_CP023380.1\|WP_000777554.1\|11465_11939_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127
NZ_CP023380.1\|WP_000516222.1\|8860_9520_-\|peptidyl-arginine-deiminase	unknown	unknown	gnl\|CDD\|222854
NZ_CP023380.1\|WP_001218539.1\|20374_20779_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223848
NZ_CP023380.1\|WP_001020837.1\|19994_20315_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023380.1\|WP_001096507.1\|8464_8767_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379547
NZ_CP023380.1\|WP_001353739.1\|15769_16267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023380.1\|WP_001353738.1\|17011_17218_-\|hemolysin-expression-modulator-Hha	unknown	unknown	gnl\|CDD\|182856
NZ_CP023380.1\|WP_000275457.1\|19380_19968_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023380.1\|WP_001215682.1\|20794_21289_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	8.14453e-38
NZ_CP023380.1\|WP_001278241.1\|9624_10521_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	2.60676e-20
NZ_CP023380.1\|WP_000071896.1\|13608_14145_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP023380.1\|WP_001293142.1\|16529_16994_-\|H-NS-histone-family-protein	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	1.71355e-26
NZ_CP023380.1\|WP_001339197.1\|12091_13300_-\|IS4-like-element-ISVsa5-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	7.26216e-11
NZ_CP023380.1\|WP_000704156.1\|10846_11371_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19
NZ_CP023380.1\|WP_001353740.1\|14773_15013_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP023380.1\|WP_063864887.1\|7240_8101_+\|class-A-beta-lactamase-TEM-190	gnl\|CDD\|185339	PRK15442, PRK15442, beta-lactamase TEM; Provisional.	0
NZ_CP023380.1\|WP_000497519.1\|14259_14586_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP023380.1\|WP_000147047.1\|21990_22296_-\|IncN-plasmid-KikA-protein	gnl\|CDD\|369359	pfam07424, TrbM, TrbM. This family contains the bacterial protein TrbM (approximately 180 residues long). In Comamonas testosteroni T-2, TrbM is derived from the IncP1beta plasmid pTSA, which encodes the widespread genes for p-toluenesulfonate (TSA) degradation.	2.47716e-06
NZ_CP023380.1\|WP_000777554.1\|11465_11939_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57
NZ_CP023380.1\|WP_000516222.1\|8860_9520_-\|peptidyl-arginine-deiminase	gnl\|CDD\|222854	PHA02518, PHA02518, ParA-like protein; Provisional.	8.96489e-20
NZ_CP023380.1\|WP_001218539.1\|20374_20779_-\|hypothetical-protein	gnl\|CDD\|223848	COG0777, AccD, Acetyl-CoA carboxylase beta subunit [Lipid metabolism].	9.64833e-05
NZ_CP023380.1\|WP_001096507.1\|8464_8767_-\|hypothetical-protein	gnl\|CDD\|379547	pfam14300, DUF4375, Domain of unknown function (DUF4375). This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.	0.00425783
NZ_CP023380.1\|WP_001353738.1\|17011_17218_-\|hemolysin-expression-modulator-Hha	gnl\|CDD\|182856	PRK10945, PRK10945, hemolysin expression modulator Hha.	5.25001e-29

>NZ_CP023380.1|WP_001353740.1|14773_15013_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP023380.1|WP_000497519.1|14259_14586_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP023380.1|WP_000071896.1|13608_14145_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP023380.1|WP_001339197.1|12091_13300_-|IS4-like-element-ISVsa5-family-transposase
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL
>NZ_CP023380.1|WP_000777554.1|11465_11939_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP023380.1|WP_000704156.1|10846_11371_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP023380.1|WP_001278241.1|9624_10521_-|tyrosine-type-recombinase/integrase
MSDAPLLQVIIAGTSKKTGAEIKKLSHLPASIFQISRSDAWNLTLSPDAARNMRDLAAQIGAGMPKYLIAPEVSLLLSYIDDLNIRMYFETLWNTGARLNEALALKPADFMLTPTRQYPQPVVILKTLKQRLKEAERRPGRPTTRHPPLHPDPRYRKPQEPAVRLVPVLDAGYALRMREYLATWKKRIKHQPVWDITSRQTPLNWINTAVARAERDGVTFSVPVTPHTFRHSYAMHLTMSGVPPRVLQSLLGHRYARSTEIYTRVFSLDVLTGSGLSFTCDPRRAKQLLGYPERINDE
>NZ_CP023380.1|WP_000516222.1|8860_9520_-|peptidyl-arginine-deiminase
MGKIITVAGHKGGIGKSTVLCSLCVCAIRKGKTACFLETDSQGSIKDFIEERKTNERLSEIPYFECYTDIPAMARKLAARFDYVFVDTPGMKSPAFVKALSCADILFTFIEPGAGIEINTLGRLVFDIKTAQAGVNPSMKAWIVLNKCSTNPSDSEASELRRQLNDDPDWLPVPRQRIYMRTAHKKAYNSGMGVHEYDDKRGNKARGEIELLLKETDVL
>NZ_CP023380.1|WP_001096507.1|8464_8767_-|hypothetical-protein
MAKLPKKIDQEIKPLDLRQFVSSAAQKPASASAVTRINLTMTDDDLDTAQVFQNKYGASRAEVIRAALAALRLVSAEERRRLFDDIRKNSPKAGRPTVNK
>NZ_CP023380.1|WP_063864887.1|7240_8101_+|class-A-beta-lactamase-TEM-190
MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRGEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERDRQIAEIGASLIKHW
>NZ_CP023380.1|WP_001353739.1|15769_16267_-|hypothetical-protein
MFDSKPYPVQVAVAQANRYTSQERADEINSRQFSALDVLVKADLLTVKDTLVDDVIGFTKTGKKVPGREYALTDEGKKYLKSPERPDFCVGHYKVDEIVDFTEPGDAMGMKITQVNYTFSPTSIAEWAKRDDVRTAFLGLESDLKEKQTKRITLVLKNDGWSAER
>NZ_CP023380.1|WP_001293142.1|16529_16994_-|H-NS-histone-family-protein
MSELTKEDEYGIISRTMMNIRSLRVFAREVDFEQLLEMQEKLNVVVEERREEAEREAVERQELEAKRQQAIEYIISLGLDPESLLAPVTADTVKTRRKAKGGVRKAKYRFKDENGEIREWSGNGKRPLALQKLLDEGHFMEDFLIDKLQPGQVE
>NZ_CP023380.1|WP_001353738.1|17011_17218_-|hemolysin-expression-modulator-Hha
MKTKQEWLFQLRKCTSRDTLEKVIEINRYKLPLSESEAFYSAADHRRAELVMNKLYDKVPSGVWKYIH
>NZ_CP023380.1|WP_000275457.1|19380_19968_-|hypothetical-protein
MYIHIVPKLYHLMANKCSLKSISIPELDFIIDSESLSVGRPWPNKCLWVGMRKGRKSVNGLVLQTDKKLRWFTTIYTWDIEDMGLIYHQVNTYIEDDDFDMVSQEILLNGSFDKWSNRVHSAYENKPPARIQPKMESLLNKPGENSHDVWEEFEWGDFLLSREESLLLHTIQSERLSTDCSLFKRQPSIESALVI
>NZ_CP023380.1|WP_001020837.1|19994_20315_-|hypothetical-protein
MNIHLFSEVLFCVWVIALIVILFIVVKYYRRVHYRLNSLSETIKRTQGGVNKRISENRELLELIKNQHPEILDEYPWVSGWLDSQEKFLVALADKSGIDINKSGLI
>NZ_CP023380.1|WP_001218539.1|20374_20779_-|hypothetical-protein
MALSPKEKKELQQRFEKQLLPDLDLSFELNGEVYKFNFDKNESGDYIDSFTQAVWGGYQDAEEWEKYGKHQETELPECPEPVEGWCDCDKCKSMIFHKEKNIYVCLSCHKQTEPFLPIDWNSNDYDWLPYEDEY
>NZ_CP023380.1|WP_001215682.1|20794_21289_-|thermonuclease-family-protein
MRHFLKALSFVVSLLPATLCAAEIQGKVIRVLDGDTIEVKTLPAKIVVYEVPIRVRLINIDAPEKKQPFGRWSTNQLKTLLAGQSVTVSYTQTDRYGRIIGRVFTTNGTDASRFMVQSGAAWVYERYNEDESLPALQREAQEQKRGLWADANPVPPWEWRYKHN
>NZ_CP023380.1|WP_000647576.1|21285_21594_-|hypothetical-protein
MKARSVRVAGIEIIDSVKTVAFVFTETLLFMVWFSAIVYGLYRVVIVLWDDPLKPQSLMEFLNFIVELYSYVLPSLAVIAVALIAVLSICKILSAIWEGRKQ
>NZ_CP023380.1|WP_001290043.1|21696_21936_-|hypothetical-protein
MSEIRFVTLASDINNIKEVYSDDELKRLLEAVNQNCPARIVLGSVEKGKEVPLKWCFRTIPERISVEEINEVKIYPELF
>NZ_CP023380.1|WP_000147047.1|21990_22296_-|IncN-plasmid-KikA-protein
MTGKNRVVLPVFLALGLISTNANASDPCASVLCLYGKAVGQGGGSECRSAEKDFFNILKKKKGSIRWSKTFDARKAFLNQCSTADPAAISKIMSKFGRVRG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP023380_1	1.1\|15399\|33\|NZ_CP023380\|PILER-CR	15399-15431	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP023380_1	1.2\|15455\|41\|NZ_CP023380\|PILER-CR	15455-15495	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951

1. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

2. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

3. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

4. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

5. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

41. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

42. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

43. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

44. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

79. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

80. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

81. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

82. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

83. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

84. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

85. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

86. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

87. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

88. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

89. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

90. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

91. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

92. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

93. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

94. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 1.1|15399|33|NZ_CP023380|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

104. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

105. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

106. spacer 1.2|15455|41|NZ_CP023380|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP023377

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023377_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_1

1006226-1007047

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR

13 spacers

The CRISPR arrays of NZ_CP023377_1

>merge|NZ_CP023377|1|1006226-1007047|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCGGACACCATAATGATACTAAGTGTCGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCGGTAACTACGGCACAAAACAGGAGCACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTGTGATTCAGTAATCGTTTGAGTATGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATCCCAGCCTTGAAATTTTGGCTCATGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCTGACGCAGTAAAAAGCGGGGCGTGATTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGCCAGCGCCGCGCACGCCTGATCATATGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTTCTATTTCCTCGGGATTTGCCGACACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAAACCGGGCAATCGCAAAAAGGCGTAATGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP023377|1|1|1006226-1007047|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCGGACACCATAATGATACTAAGTGTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGTAACTACGGCACAAAACAGGAGCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTGACGCAGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP023377|1|1|1006226-1007047|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCGGACACCATAATGATACTAAGTGTCGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGTAACTACGGCACAAAACAGGAGCACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTGACGCAGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP023377|1|1|1006348-1007046|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTTGTGATTCAGTAATCGTTTGAGTATGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAATCCCAGCCTTGAAATTTTGGCTCATGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCTGACGCAGTAAAAAGCGGGGCGTGATTCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGTGCCAGCGCCGCGCACGCCTGATCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_001288228.1\|1004935_1005076_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023377.1\|WP_001299097.1\|1015279_1016140_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP023377.1\|WP_001130266.1\|1016287_1016863_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP023377.1\|WP_000059307.1\|1011640_1013095_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP023377.1\|WP_000210878.1\|1000190_1001828_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP023377.1\|WP_000036723.1\|1001915_1003214_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP023377.1\|WP_000046812.1\|994856_996158_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP023377.1\|WP_000581941.1\|998517_998766_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP023377.1\|WP_001098105.1\|1013188_1014526_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP023377.1\|WP_096037766.1\|1009190_1010468_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP023377.1\|WP_001071648.1\|999171_999963_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP023377.1\|WP_001199973.1\|1005214_1005886_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP023377.1\|WP_096037765.1\|1004145_1004922_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP023377.1\|WP_000226815.1\|996205_998440_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP023377.1\|WP_000254738.1\|998765_999101_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP023377.1\|WP_000021321.1\|1010785_1011571_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP023377.1\|WP_000109529.1\|1016879_1017140_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP023377.1\|WP_033553649.1\|1007685_1009164_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP023377.1\|WP_001299652.1\|1014503_1015283_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP023377.1\|WP_000389121.1\|1017130_1018402_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_000210878.1\|1000190_1001828_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP023377.1\|WP_001299097.1\|1015279_1016140_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP023377.1\|WP_001130266.1\|1016287_1016863_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP023377.1\|WP_000059307.1\|1011640_1013095_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.73778e-83
NZ_CP023377.1\|WP_000389121.1\|1017130_1018402_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
NZ_CP023377.1\|WP_000036723.1\|1001915_1003214_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP023377.1\|WP_000046812.1\|994856_996158_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP023377.1\|WP_000581941.1\|998517_998766_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	2.43005e-47
NZ_CP023377.1\|WP_001098105.1\|1013188_1014526_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP023377.1\|WP_096037766.1\|1009190_1010468_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.28006e-29
NZ_CP023377.1\|WP_001071648.1\|999171_999963_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP023377.1\|WP_001199973.1\|1005214_1005886_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP023377.1\|WP_096037765.1\|1004145_1004922_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	6.27404e-88
NZ_CP023377.1\|WP_000226815.1\|996205_998440_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP023377.1\|WP_000254738.1\|998765_999101_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP023377.1\|WP_000021321.1\|1010785_1011571_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP023377.1\|WP_000109529.1\|1016879_1017140_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	7.43419e-42
NZ_CP023377.1\|WP_033553649.1\|1007685_1009164_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	5.62552e-108
NZ_CP023377.1\|WP_001299652.1\|1014503_1015283_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62

>NZ_CP023377.1|WP_001199973.1|1005214_1005886_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP023377.1|WP_001288228.1|1004935_1005076_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP023377.1|WP_096037765.1|1004145_1004922_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRVMLPTY
>NZ_CP023377.1|WP_000036723.1|1001915_1003214_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP023377.1|WP_000210878.1|1000190_1001828_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP023377.1|WP_001071648.1|999171_999963_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP023377.1|WP_000254738.1|998765_999101_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP023377.1|WP_000581941.1|998517_998766_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPTTLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP023377.1|WP_000226815.1|996205_998440_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP023377.1|WP_000046812.1|994856_996158_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP023377.1|WP_033553649.1|1007685_1009164_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWSVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNICNEINHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP023377.1|WP_096037766.1|1009190_1010468_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSAFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALVMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP023377.1|WP_000021321.1|1010785_1011571_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP023377.1|WP_000059307.1|1011640_1013095_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP023377.1|WP_001098105.1|1013188_1014526_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP023377.1|WP_001299652.1|1014503_1015283_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP023377.1|WP_001299097.1|1015279_1016140_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP023377.1|WP_001130266.1|1016287_1016863_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP023377.1|WP_000109529.1|1016879_1017140_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP023377.1|WP_000389121.1|1017130_1018402_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: NZ_CP023377_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_2

1034097-1034613

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

8 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP023377_2

>merge|NZ_CP023377|2|1034097-1034613|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCGTAGAGATTCTCGAAACCGATCCGGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAAATAATAATCCAGTAGCCCCATGTATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAATAAAAAATATTCTATTTCTGCTGAATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTGCGAGCAAAAGATCCAGGCCGAGAAAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATAACCGCGTCAGTATTGGACAGGATATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATCTATTGTGAATTTGAAATGGTCCAGCACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGTGTGTTCCCCGCGTCAGCGGGGATAAACCGGGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP023377|2|2|1034097-1034552|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCGTAGAGATTCTCGAAACCGATCCGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAATAATAATCCAGTAGCCCCATGTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAATAAAAAATATTCTATTTCTGCTGAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACCGCGTCAGTATTGGACAGGATATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP023377|2|2|1034097-1034552|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCGTAGAGATTCTCGAAACCGATCCGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAATAATAATCCAGTAGCCCCATGTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAATAAAAAATATTCTATTTCTGCTGAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACCGCGTCAGTATTGGACAGGATATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP023377|2|2|1034097-1034613|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGCGTAGAGATTCTCGAAACCGATCCGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATAAATAATAATCCAGTAGCCCCATGTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAATAAAAAATATTCTATTTCTGCTGAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGCGAGCAAAAGATCCAGGCCGAGAAAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATAACCGCGTCAGTATTGGACAGGATATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATCTATTGTGAATTTGAAATGGTCCAGCACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_033554089.1\|1031411_1032158_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP023377.1\|WP_001219242.1\|1040471_1040951_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP023377.1\|WP_001295182.1\|1041977_1042739_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP023377.1\|WP_000246138.1\|1039761_1040472_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP023377.1\|WP_000568946.1\|1040947_1041997_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP023377.1\|WP_000206450.1\|1030345_1031401_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP023377.1\|WP_000517476.1\|1039431_1039743_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP023377.1\|WP_001084112.1\|1028238_1029801_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP023377.1\|WP_000372108.1\|1035922_1036831_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP023377.1\|WP_000490430.1\|1034633_1035671_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP023377.1\|WP_000029329.1\|1029797_1030334_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP023377.1\|WP_000144854.1\|1032786_1033710_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP023377.1\|WP_096037767.1\|1025441_1028141_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP023377.1\|WP_001090386.1\|1036832_1038260_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP023377.1\|WP_001173676.1\|1038259_1038865_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP023377.1\|WP_001300563.1\|1024090_1025203_-\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP023377.1\|WP_000281461.1\|1032139_1032790_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP023377.1\|WP_000061856.1\|1033706_1034000_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP023377.1\|WP_001246104.1\|1038914_1039238_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP023377.1\|WP_000956460.1\|1023745_1023898_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_033554089.1\|1031411_1032158_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.72822e-47
NZ_CP023377.1\|WP_001219242.1\|1040471_1040951_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP023377.1\|WP_001295182.1\|1041977_1042739_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP023377.1\|WP_000246138.1\|1039761_1040472_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP023377.1\|WP_000568946.1\|1040947_1041997_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP023377.1\|WP_000206450.1\|1030345_1031401_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.80924e-154
NZ_CP023377.1\|WP_000517476.1\|1039431_1039743_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP023377.1\|WP_001084112.1\|1028238_1029801_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP023377.1\|WP_000372108.1\|1035922_1036831_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP023377.1\|WP_000490430.1\|1034633_1035671_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP023377.1\|WP_000029329.1\|1029797_1030334_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP023377.1\|WP_000144854.1\|1032786_1033710_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	8.96044e-158
NZ_CP023377.1\|WP_096037767.1\|1025441_1028141_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.45377e-179
NZ_CP023377.1\|WP_001090386.1\|1036832_1038260_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP023377.1\|WP_001173676.1\|1038259_1038865_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
NZ_CP023377.1\|WP_001300563.1\|1024090_1025203_-\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
NZ_CP023377.1\|WP_000281461.1\|1032139_1032790_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.38075e-91
NZ_CP023377.1\|WP_000061856.1\|1033706_1034000_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.21674e-65
NZ_CP023377.1\|WP_001246104.1\|1038914_1039238_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP023377.1\|WP_000956460.1\|1023745_1023898_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13

>NZ_CP023377.1|WP_000061856.1|1033706_1034000_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP023377.1|WP_000144854.1|1032786_1033710_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP023377.1|WP_000281461.1|1032139_1032790_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFTPELSTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSWQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP023377.1|WP_033554089.1|1031411_1032158_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGGGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDRFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP023377.1|WP_000206450.1|1030345_1031401_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKVLAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA
>NZ_CP023377.1|WP_000029329.1|1029797_1030334_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP023377.1|WP_001084112.1|1028238_1029801_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISAPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWINVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDEQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP023377.1|WP_096037767.1|1025441_1028141_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFLGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>NZ_CP023377.1|WP_001300563.1|1024090_1025203_-|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>NZ_CP023377.1|WP_000956460.1|1023745_1023898_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP023377.1|WP_000490430.1|1034633_1035671_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP023377.1|WP_000372108.1|1035922_1036831_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP023377.1|WP_001090386.1|1036832_1038260_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP023377.1|WP_001173676.1|1038259_1038865_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP023377.1|WP_001246104.1|1038914_1039238_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP023377.1|WP_000517476.1|1039431_1039743_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP023377.1|WP_000246138.1|1039761_1040472_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP023377.1|WP_001219242.1|1040471_1040951_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP023377.1|WP_000568946.1|1040947_1041997_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP023377.1|WP_001295182.1|1041977_1042739_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_CP023377_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_3

1263179-1263300

Orphan

Consensus_repeat	Method
GCGTCTTATCAGGCCTACAATGTACAGAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023377_3

>merge|NZ_CP023377|3|1263179-1263300|CRISPRCasFinder
GCGTCTTATCAGGCCTACAATGTACAGAACCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCGTAATGCGTCTTATCAGGCCTACAGTGTACAGAACC

>NZ_CP023377|3|3|1263179-1263300|CRISPRCasFinder
GCGTCTTATCAGGCCTACAATGTACAGAACC	GTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGCCGTTGCCTGATGCGACGCGTAAT
GCGTCTTATCAGGCCTACAGTGTACAGAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_000553451.1\|1261488_1262292_-\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NZ_CP023377.1\|WP_001281377.1\|1253696_1254509_-\|3-(cis-5,6-dihydroxycyclohexa-1,-3-dien-1-yl)propanoate-dehydrogenase	unknown	unknown	gnl\|CDD\|187606
NZ_CP023377.1\|WP_000523616.1\|1269035_1269236_+\|Fe-S-cluster-assembly-protein-IscX	unknown	unknown	gnl\|CDD\|170660
NZ_CP023377.1\|WP_001124469.1\|1268688_1269024_+\|ISC-system-2Fe-2S-type-ferredoxin	unknown	unknown	gnl\|CDD\|131062
NZ_CP023377.1\|WP_000384413.1\|1266304_1266820_+\|co-chaperone-HscB	unknown	unknown	gnl\|CDD\|179914
NZ_CP023377.1\|WP_024249991.1\|1260489_1261344_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP023377.1\|WP_001241356.1\|1263511_1264000_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|236777
NZ_CP023377.1\|WP_000331707.1\|1265482_1265869_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
NZ_CP023377.1\|WP_001295373.1\|1264240_1265455_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
NZ_CP023377.1\|WP_000244174.1\|1257887_1259027_+\|3-phenylpropionate-MFS-transporter	unknown	unknown	gnl\|CDD\|236856
NZ_CP023377.1\|WP_000423257.1\|1256837_1257728_+\|DNA-binding-transcriptional-regulator-HcaR	unknown	unknown	gnl\|CDD\|182137
NZ_CP023377.1\|WP_000211172.1\|1255340_1256702_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|176890
NZ_CP023377.1\|WP_001196613.1\|1266836_1268687_+\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360
NZ_CP023377.1\|WP_000982997.1\|1259018_1260299_-\|stationary-phase-inducible-protein-CsiE	unknown	unknown	gnl\|CDD\|236932
NZ_CP023377.1\|WP_000940019.1\|1262410_1263151_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	unknown	unknown	gnl\|CDD\|185069
NZ_CP023377.1\|WP_000028953.1\|1265885_1266209_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|181914
NZ_CP023377.1\|WP_000133580.1\|1269293_1270577_+\|aminopeptidase-PepB	unknown	unknown	gnl\|CDD\|235330
NZ_CP023377.1\|WP_001080102.1\|1254505_1254826_-\|bifunctional-3-phenylpropionate/cinnamic-acid-dioxygenase-ferredoxin-subunit	unknown	unknown	gnl\|CDD\|170182
NZ_CP023377.1\|WP_001276076.1\|1254825_1255344_-\|3-phenylpropionate/cinnamic-acid-dioxygenase-subunit-beta	unknown	unknown	gnl\|CDD\|236647
NZ_CP023377.1\|WP_001295479.1\|1270718_1271495_+\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|183229

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_000553451.1\|1261488_1262292_-\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	0
NZ_CP023377.1\|WP_001281377.1\|1253696_1254509_-\|3-(cis-5,6-dihydroxycyclohexa-1,-3-dien-1-yl)propanoate-dehydrogenase	gnl\|CDD\|187606	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs. cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.95991e-153
NZ_CP023377.1\|WP_000523616.1\|1269035_1269236_+\|Fe-S-cluster-assembly-protein-IscX	gnl\|CDD\|170660	PRK10721, PRK10721, hypothetical protein; Provisional.	9.45894e-40
NZ_CP023377.1\|WP_001124469.1\|1268688_1269024_+\|ISC-system-2Fe-2S-type-ferredoxin	gnl\|CDD\|131062	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	2.60952e-69
NZ_CP023377.1\|WP_000384413.1\|1266304_1266820_+\|co-chaperone-HscB	gnl\|CDD\|179914	PRK05014, hscB, co-chaperone HscB; Provisional.	1.92468e-95
NZ_CP023377.1\|WP_024249991.1\|1260489_1261344_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	7.79911e-37
NZ_CP023377.1\|WP_001241356.1\|1263511_1264000_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|236777	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR.	1.24414e-111
NZ_CP023377.1\|WP_000331707.1\|1265482_1265869_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	3.13648e-99
NZ_CP023377.1\|WP_001295373.1\|1264240_1265455_+\|cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP023377.1\|WP_000244174.1\|1257887_1259027_+\|3-phenylpropionate-MFS-transporter	gnl\|CDD\|236856	PRK11128, PRK11128, 3-phenylpropionate MFS transporter.	0
NZ_CP023377.1\|WP_000423257.1\|1256837_1257728_+\|DNA-binding-transcriptional-regulator-HcaR	gnl\|CDD\|182137	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional.	1.15773e-177
NZ_CP023377.1\|WP_000211172.1\|1255340_1256702_-\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|176890	cd08881, RHO_alpha_C_NDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases. C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs, also known as aromatic ring hydroxylating dioxygenases). This domain binds non-heme Fe(II). RHOs utilize non-heme Fe(II) to catalyze the addition of hydroxyl groups to the aromatic ring, an initial step in the oxidative degradation of aromatic compounds. RHOs are composed of either two or three protein components, and are comprised of an electron transport chain (ETC) and an oxygenase. The ETC transfers reducing equivalents form the electron donor to the oxygenase component, which in turn transfers electrons to the oxygen molecules. The oxygenase components are oligomers, either (alpha)n or (alpha)n(beta)n. The alpha subunits are the catalytic components and have an N-terminal domain, which binds a Rieske-like 2Fe-2S cluster, and a C-terminal domain which binds the non-heme Fe(II). The Fe(II) is co-ordinated by conserved His and Asp residues. Proteins belonging to this subgroup include the terminal oxygenase alpha subunits of biphenyl dioxygenase, cumene dioxygenase from Pseudomonas fluorescens IP01, ethylbenzene dioxygenase, naphthalene 1,2-dioxygenase, nitrobenzene dioxygenase from Comamonas sp. strain JS765, toluene 2,3-dioxygenase from Pseudomonas putida F1, dioxin dioxygenase of Sphingomonas sp. Strain RW1, and the polycyclic aromatic hydrocarbons (PAHs)degrading ring-hydroxylating dioxygenase from Sphingomonas CHY-1. This subfamily belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket.	4.93197e-87
NZ_CP023377.1\|WP_001196613.1\|1266836_1268687_+\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
NZ_CP023377.1\|WP_000982997.1\|1259018_1260299_-\|stationary-phase-inducible-protein-CsiE	gnl\|CDD\|236932	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional.	0
NZ_CP023377.1\|WP_000940019.1\|1262410_1263151_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	gnl\|CDD\|185069	PRK15114, PRK15114, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Provisional.	0
NZ_CP023377.1\|WP_000028953.1\|1265885_1266209_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|181914	PRK09502, iscA, iron-sulfur cluster assembly protein IscA.	1.60892e-70
NZ_CP023377.1\|WP_000133580.1\|1269293_1270577_+\|aminopeptidase-PepB	gnl\|CDD\|235330	PRK05015, PRK05015, aminopeptidase B; Provisional.	0
NZ_CP023377.1\|WP_001080102.1\|1254505_1254826_-\|bifunctional-3-phenylpropionate/cinnamic-acid-dioxygenase-ferredoxin-subunit	gnl\|CDD\|170182	PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional.	6.92601e-61
NZ_CP023377.1\|WP_001276076.1\|1254825_1255344_-\|3-phenylpropionate/cinnamic-acid-dioxygenase-subunit-beta	gnl\|CDD\|236647	PRK10069, PRK10069, 3-phenylpropionate/cinnamic acid dioxygenase subunit beta.	1.40333e-78
NZ_CP023377.1\|WP_001295479.1\|1270718_1271495_+\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|183229	PRK11611, PRK11611, enhanced serine sensitivity protein SseB; Provisional.	5.74242e-178

>NZ_CP023377.1|WP_000940019.1|1262410_1263151_+|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE
>NZ_CP023377.1|WP_000553451.1|1261488_1262292_-|inositol-1-monophosphatase
MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR
>NZ_CP023377.1|WP_024249991.1|1260489_1261344_-|alpha/beta-hydrolase
MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYHGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANTLAVIGQGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN
>NZ_CP023377.1|WP_000982997.1|1259018_1260299_-|stationary-phase-inducible-protein-CsiE
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGMTPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA
>NZ_CP023377.1|WP_000244174.1|1257887_1259027_+|3-phenylpropionate-MFS-transporter
MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIAPRVSDPSRLIFALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVILALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC
>NZ_CP023377.1|WP_000423257.1|1256837_1257728_+|DNA-binding-transcriptional-regulator-HcaR
MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA
>NZ_CP023377.1|WP_000211172.1|1255340_1256702_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVEVWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQEVMK
>NZ_CP023377.1|WP_001276076.1|1254825_1255344_-|3-phenylpropionate/cinnamic-acid-dioxygenase-subunit-beta
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
>NZ_CP023377.1|WP_001080102.1|1254505_1254826_-|bifunctional-3-phenylpropionate/cinnamic-acid-dioxygenase-ferredoxin-subunit
MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP
>NZ_CP023377.1|WP_001281377.1|1253696_1254509_-|3-(cis-5,6-dihydroxycyclohexa-1,-3-dien-1-yl)propanoate-dehydrogenase
MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL
>NZ_CP023377.1|WP_001241356.1|1263511_1264000_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRIQDAIDVKLRA
>NZ_CP023377.1|WP_001295373.1|1264240_1265455_+|cysteine-desulfurase
MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH
>NZ_CP023377.1|WP_000331707.1|1265482_1265869_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK
>NZ_CP023377.1|WP_000028953.1|1265885_1266209_+|iron-sulfur-cluster-assembly-protein-IscA
MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV
>NZ_CP023377.1|WP_000384413.1|1266304_1266820_+|co-chaperone-HscB
MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF
>NZ_CP023377.1|WP_001196613.1|1266836_1268687_+|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV
>NZ_CP023377.1|WP_001124469.1|1268688_1269024_+|ISC-system-2Fe-2S-type-ferredoxin
MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH
>NZ_CP023377.1|WP_000523616.1|1269035_1269236_+|Fe-S-cluster-assembly-protein-IscX
MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEAE
>NZ_CP023377.1|WP_000133580.1|1269293_1270577_+|aminopeptidase-PepB
MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLIQRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDNRLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLASAAQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA
>NZ_CP023377.1|WP_001295479.1|1270718_1271495_+|enhanced-serine-sensitivity-protein-SseB
MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII

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Crispr_ID: NZ_CP023377_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_4

1574149-1574266

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023377_4

>merge|NZ_CP023377|4|1574149-1574266|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>NZ_CP023377|4|4|1574149-1574266|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_001075164.1\|1574285_1576571_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP023377.1\|WP_000332037.1\|1572921_1574052_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP023377.1\|WP_001000359.1\|1564724_1565915_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP023377.1\|WP_000948732.1\|1569061_1570420_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP023377.1\|WP_001209902.1\|1565911_1567171_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP023377.1\|WP_000857257.1\|1567160_1568789_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP023377.1\|WP_001104498.1\|1591638_1593288_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP023377.1\|WP_123000331.1\|1587243_1591638_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP023377.1\|WP_000301050.1\|1571963_1572614_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP023377.1\|WP_000012280.1\|1584791_1586480_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP023377.1\|WP_000990763.1\|1581146_1581869_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP023377.1\|WP_001298790.1\|1586476_1587100_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP023377.1\|WP_001741976.1\|1593292_1594069_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP023377.1\|WP_000786549.1\|1594142_1595327_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP023377.1\|WP_000135040.1\|1572667_1572922_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP023377.1\|WP_000779105.1\|1570424_1571501_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP023377.1\|WP_000140610.1\|1563629_1564532_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP023377.1\|WP_033554484.1\|1582015_1584643_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP023377.1\|WP_000992954.1\|1562785_1563589_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_CP023377.1\|WP_001220073.1\|1577266_1581019_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_001075164.1\|1574285_1576571_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP023377.1\|WP_000332037.1\|1572921_1574052_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP023377.1\|WP_001000359.1\|1564724_1565915_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP023377.1\|WP_000948732.1\|1569061_1570420_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP023377.1\|WP_001209902.1\|1565911_1567171_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP023377.1\|WP_000857257.1\|1567160_1568789_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP023377.1\|WP_001104498.1\|1591638_1593288_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	4.81212e-127
NZ_CP023377.1\|WP_123000331.1\|1587243_1591638_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP023377.1\|WP_000301050.1\|1571963_1572614_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_CP023377.1\|WP_000012280.1\|1584791_1586480_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP023377.1\|WP_000990763.1\|1581146_1581869_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	4.45121e-170
NZ_CP023377.1\|WP_001298790.1\|1586476_1587100_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	1.97631e-139
NZ_CP023377.1\|WP_001741976.1\|1593292_1594069_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	2.55624e-152
NZ_CP023377.1\|WP_000786549.1\|1594142_1595327_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP023377.1\|WP_000135040.1\|1572667_1572922_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP023377.1\|WP_000779105.1\|1570424_1571501_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP023377.1\|WP_000140610.1\|1563629_1564532_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP023377.1\|WP_033554484.1\|1582015_1584643_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP023377.1\|WP_000992954.1\|1562785_1563589_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
NZ_CP023377.1\|WP_001220073.1\|1577266_1581019_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0

>NZ_CP023377.1|WP_000332037.1|1572921_1574052_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP023377.1|WP_000135040.1|1572667_1572922_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP023377.1|WP_000301050.1|1571963_1572614_+|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP023377.1|WP_000779105.1|1570424_1571501_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP023377.1|WP_000948732.1|1569061_1570420_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP023377.1|WP_000857257.1|1567160_1568789_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP023377.1|WP_001209902.1|1565911_1567171_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP023377.1|WP_001000359.1|1564724_1565915_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP023377.1|WP_000140610.1|1563629_1564532_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLSNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH
>NZ_CP023377.1|WP_000992954.1|1562785_1563589_+|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY
>NZ_CP023377.1|WP_001075164.1|1574285_1576571_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP023377.1|WP_001220073.1|1577266_1581019_+|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVMLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP023377.1|WP_000990763.1|1581146_1581869_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEHILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP023377.1|WP_033554484.1|1582015_1584643_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEASRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP023377.1|WP_000012280.1|1584791_1586480_+|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERAAEKTPVRQRIVGSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDTSFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKNRPAMVDVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP023377.1|WP_001298790.1|1586476_1587100_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGFSSQYLPPEMTLTPGQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP023377.1|WP_123000331.1|1587243_1591638_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELHLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKDEDFSEEDIRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP023377.1|WP_001104498.1|1591638_1593288_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEDVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLANKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP023377.1|WP_001741976.1|1593292_1594069_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSSALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP023377.1|WP_000786549.1|1594142_1595327_-|acetyl-CoA-C-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: NZ_CP023377_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_5

2951678-2951769

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023377_5

>merge|NZ_CP023377|5|2951678-2951769|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP023377|5|5|2951678-2951769|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_001044280.1\|2953256_2954498_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP023377.1\|WP_001741503.1\|2941016_2944979_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP023377.1\|WP_001619304.1\|2948134_2948935_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP023377.1\|WP_001001189.1\|2948944_2949535_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP023377.1\|WP_001018489.1\|2939085_2940594_-\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|185317
NZ_CP023377.1\|WP_001126780.1\|2947740_2948127_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP023377.1\|WP_001307708.1\|2947036_2947729_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP023377.1\|WP_000420621.1\|2956308_2957229_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP023377.1\|WP_000209868.1\|2957685_2958285_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP023377.1\|WP_001062091.1\|2958281_2960828_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP023377.1\|WP_001301219.1\|2945018_2945657_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP023377.1\|WP_001143120.1\|2952809_2953037_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP023377.1\|WP_000979516.1\|2940752_2940962_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023377.1\|WP_096037939.1\|2960827_2962000_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP023377.1\|WP_000024560.1\|2957228_2957534_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP023377.1\|WP_001120125.1\|2962129_2962822_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP023377.1\|WP_001028095.1\|2949545_2950040_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP023377.1\|WP_033553618.1\|2950060_2951389_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP023377.1\|WP_001264933.1\|2962794_2963823_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
NZ_CP023377.1\|WP_001151437.1\|2952192_2952789_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_001044280.1\|2953256_2954498_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP023377.1\|WP_001741503.1\|2941016_2944979_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP023377.1\|WP_001619304.1\|2948134_2948935_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	4.69786e-141
NZ_CP023377.1\|WP_001001189.1\|2948944_2949535_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.17913e-130
NZ_CP023377.1\|WP_001018489.1\|2939085_2940594_-\|sodium/proline-symporter-PutP	gnl\|CDD\|185317	PRK15419, PRK15419, sodium/proline symporter PutP.	0
NZ_CP023377.1\|WP_001126780.1\|2947740_2948127_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP023377.1\|WP_001307708.1\|2947036_2947729_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	5.84226e-169
NZ_CP023377.1\|WP_000420621.1\|2956308_2957229_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP023377.1\|WP_000209868.1\|2957685_2958285_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.35791e-84
NZ_CP023377.1\|WP_001062091.1\|2958281_2960828_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP023377.1\|WP_001301219.1\|2945018_2945657_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	3.85643e-153
NZ_CP023377.1\|WP_001143120.1\|2952809_2953037_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP023377.1\|WP_096037939.1\|2960827_2962000_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP023377.1\|WP_000024560.1\|2957228_2957534_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_CP023377.1\|WP_001120125.1\|2962129_2962822_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.16516e-137
NZ_CP023377.1\|WP_001028095.1\|2949545_2950040_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_CP023377.1\|WP_033553618.1\|2950060_2951389_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP023377.1\|WP_001264933.1\|2962794_2963823_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	1.32852e-176
NZ_CP023377.1\|WP_001151437.1\|2952192_2952789_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133

>NZ_CP023377.1|WP_033553618.1|2950060_2951389_+|pyrimidine-utilization-transport-protein-G
MAMFGLPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMTVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP
>NZ_CP023377.1|WP_001028095.1|2949545_2950040_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP023377.1|WP_001001189.1|2948944_2949535_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIIACRALGLDTGPMSGFDRQHVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_CP023377.1|WP_001619304.1|2948134_2948935_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQVLVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP023377.1|WP_001126780.1|2947740_2948127_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP023377.1|WP_001307708.1|2947036_2947729_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>NZ_CP023377.1|WP_001301219.1|2945018_2945657_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRVVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP023377.1|WP_001741503.1|2941016_2944979_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKVNIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP023377.1|WP_000979516.1|2940752_2940962_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP023377.1|WP_001018489.1|2939085_2940594_-|sodium/proline-symporter-PutP
MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEVIKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFSSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES
>NZ_CP023377.1|WP_001151437.1|2952192_2952789_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP023377.1|WP_001143120.1|2952809_2953037_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP023377.1|WP_001044280.1|2953256_2954498_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>NZ_CP023377.1|WP_000420621.1|2956308_2957229_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP023377.1|WP_000024560.1|2957228_2957534_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP023377.1|WP_000209868.1|2957685_2958285_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP023377.1|WP_001062091.1|2958281_2960828_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP023377.1|WP_096037939.1|2960827_2962000_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSAHWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP023377.1|WP_001120125.1|2962129_2962822_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP023377.1|WP_001264933.1|2962794_2963823_-|TMAO-reductase-system-periplasmic-protein-TorT
MRVLLFLLLSLFMLPAFSADNLLRWHDAQHFTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK

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Crispr_ID: NZ_CP023377_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_6

3094237-3094503

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

4 spacers

The CRISPR arrays of NZ_CP023377_6

>merge|NZ_CP023377|6|3094237-3094503|CRISPRCasFinder,PILER-CR
CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAATTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACT

>NZ_CP023377|6|6|3094237-3094503|CRISPRCasFinder
CATTTTATCTGTCTGTACGGCAGTGAACA	TGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACT

>NZ_CP023377|6|3|3094293-3094502|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_000077006.1\|3082863_3086853_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP023377.1\|WP_001040187.1\|3093633_3093852_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP023377.1\|WP_001241678.1\|3092644_3093349_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP023377.1\|WP_000178660.1\|3108100_3109069_+\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP023377.1\|WP_000746460.1\|3099901_3101017_-\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP023377.1\|WP_023281794.1\|3090881_3092603_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP023377.1\|WP_033554496.1\|3094711_3096988_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP023377.1\|WP_000458809.1\|3106436_3108089_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP023377.1\|WP_000188180.1\|3097958_3099905_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP023377.1\|WP_000410785.1\|3097661_3097886_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP023377.1\|WP_001380339.1\|3101167_3102124_+\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP023377.1\|WP_000886683.1\|3079360_3080653_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP023377.1\|WP_000599802.1\|3102120_3103779_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP023377.1\|WP_001338421.1\|3105393_3106293_+\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP023377.1\|WP_000520781.1\|3097018_3097339_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP023377.1\|WP_000228473.1\|3086987_3087482_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP023377.1\|WP_096037945.1\|3088026_3088992_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP023377.1\|WP_000067755.1\|3080743_3082087_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP023377.1\|WP_001295343.1\|3082097_3082709_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP023377.1\|WP_001043577.1\|3089114_3090881_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_000077006.1\|3082863_3086853_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP023377.1\|WP_001040187.1\|3093633_3093852_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP023377.1\|WP_001241678.1\|3092644_3093349_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.45002e-139
NZ_CP023377.1\|WP_000178660.1\|3108100_3109069_+\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP023377.1\|WP_000746460.1\|3099901_3101017_-\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP023377.1\|WP_023281794.1\|3090881_3092603_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP023377.1\|WP_033554496.1\|3094711_3096988_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP023377.1\|WP_000458809.1\|3106436_3108089_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP023377.1\|WP_000188180.1\|3097958_3099905_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP023377.1\|WP_000410785.1\|3097661_3097886_+\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP023377.1\|WP_001380339.1\|3101167_3102124_+\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	9.34941e-132
NZ_CP023377.1\|WP_000886683.1\|3079360_3080653_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP023377.1\|WP_000599802.1\|3102120_3103779_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP023377.1\|WP_001338421.1\|3105393_3106293_+\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.37433e-118
NZ_CP023377.1\|WP_000520781.1\|3097018_3097339_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP023377.1\|WP_000228473.1\|3086987_3087482_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP023377.1\|WP_096037945.1\|3088026_3088992_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP023377.1\|WP_000067755.1\|3080743_3082087_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP023377.1\|WP_001295343.1\|3082097_3082709_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP023377.1\|WP_001043577.1\|3089114_3090881_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0

>NZ_CP023377.1|WP_001040187.1|3093633_3093852_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP023377.1|WP_001241678.1|3092644_3093349_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>NZ_CP023377.1|WP_023281794.1|3090881_3092603_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTHAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP023377.1|WP_001043577.1|3089114_3090881_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP023377.1|WP_096037945.1|3088026_3088992_+|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTKRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP023377.1|WP_000228473.1|3086987_3087482_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP023377.1|WP_000077006.1|3082863_3086853_-|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDAEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP023377.1|WP_001295343.1|3082097_3082709_-|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP023377.1|WP_000067755.1|3080743_3082087_-|replication-associated-recombination-protein-A
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP023377.1|WP_000886683.1|3079360_3080653_-|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>NZ_CP023377.1|WP_033554496.1|3094711_3096988_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYETHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP023377.1|WP_000520781.1|3097018_3097339_-|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP023377.1|WP_000410785.1|3097661_3097886_+|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP023377.1|WP_000188180.1|3097958_3099905_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP023377.1|WP_000746460.1|3099901_3101017_-|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP023377.1|WP_001380339.1|3101167_3102124_+|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>NZ_CP023377.1|WP_000599802.1|3102120_3103779_-|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP023377.1|WP_001338421.1|3105393_3106293_+|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP023377.1|WP_000458809.1|3106436_3108089_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>NZ_CP023377.1|WP_000178660.1|3108100_3109069_+|NADH-oxidoreductase
MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNCPQADVQVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA

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Crispr_ID: NZ_CP023377_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_7

3215208-3215352

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023377_7

>merge|NZ_CP023377|7|3215208-3215352|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>NZ_CP023377|7|7|3215208-3215352|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_001408763.1\|3203106_3204096_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP023377.1\|WP_000042533.1\|3205592_3207614_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP023377.1\|WP_096037950.1\|3228539_3229943_+\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP023377.1\|WP_004181708.1\|3224692_3225466_-\|LamB/YcsF-family-protein	unknown	unknown	gnl\|CDD\|235446
NZ_CP023377.1\|WP_001300379.1\|3211882_3213172_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP023377.1\|WP_088459819.1\|3215375_3217460_-\|hydratase	unknown	unknown	gnl\|CDD\|183125
NZ_CP023377.1\|WP_004187005.1\|3220548_3222294_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP023377.1\|WP_004186999.1\|3229983_3230820_-\|DUF1989-domain-containing-protein	unknown	unknown	gnl\|CDD\|226191
NZ_CP023377.1\|WP_004181705.1\|3227058_3227709_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP023377.1\|WP_096037949.1\|3222293_3223877_-\|5-oxoprolinase/urea-amidolyase-family-protein	unknown	unknown	gnl\|CDD\|376868
NZ_CP023377.1\|WP_000767389.1\|3213230_3213707_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP023377.1\|WP_000246761.1\|3208862_3209618_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP023377.1\|WP_001091569.1\|3213858_3215142_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP023377.1\|WP_000044837.1\|3208192_3208870_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP023377.1\|WP_004187003.1\|3223889_3224696_-\|putative-hydro-lyase	unknown	unknown	gnl\|CDD\|180100
NZ_CP023377.1\|WP_004181707.1\|3225474_3226719_-\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|224826
NZ_CP023377.1\|WP_000118797.1\|3209604_3210759_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP023377.1\|WP_004187010.1\|3218624_3219089_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023377.1\|WP_001741442.1\|3204492_3205401_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_CP023377.1\|WP_000951213.1\|3210755_3211796_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_001408763.1\|3203106_3204096_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_CP023377.1\|WP_000042533.1\|3205592_3207614_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP023377.1\|WP_096037950.1\|3228539_3229943_+\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	3.2043e-175
NZ_CP023377.1\|WP_004181708.1\|3224692_3225466_-\|LamB/YcsF-family-protein	gnl\|CDD\|235446	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA.	8.59451e-141
NZ_CP023377.1\|WP_001300379.1\|3211882_3213172_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP023377.1\|WP_088459819.1\|3215375_3217460_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
NZ_CP023377.1\|WP_004187005.1\|3220548_3222294_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP023377.1\|WP_004186999.1\|3229983_3230820_-\|DUF1989-domain-containing-protein	gnl\|CDD\|226191	COG3665, COG3665, Uncharacterized conserved protein [Function unknown].	1.01969e-74
NZ_CP023377.1\|WP_004181705.1\|3227058_3227709_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.0175e-32
NZ_CP023377.1\|WP_096037949.1\|3222293_3223877_-\|5-oxoprolinase/urea-amidolyase-family-protein	gnl\|CDD\|376868	pfam02626, CT_A_B, Carboxyltransferase domain, subdomain A and B. Urea carboxylase (UC) catalyzes a two-step, ATP- and biotin-dependent carboxylation reaction of urea. It is composed of biotin carboxylase (BC), carboxyltransferase (CT), and biotin carboxyl carrier protein (BCCP) domains. The CT domain of UC consists of four subdomains, named A, B, C and D. This domain covers the A and B subdomains of the CT domain. This domain covers the whole length of KipA (kinase A) from Bacillus subtilis. It can also be found in S. cerevisiae urea amidolyase Dur1,2, which is a multifunctional biotin-dependent enzyme with domains for urea carboxylase and allophanate (urea carboxylate) hydrolase activity.	4.46664e-102
NZ_CP023377.1\|WP_000767389.1\|3213230_3213707_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
NZ_CP023377.1\|WP_000246761.1\|3208862_3209618_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
NZ_CP023377.1\|WP_001091569.1\|3213858_3215142_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP023377.1\|WP_000044837.1\|3208192_3208870_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	7.01829e-111
NZ_CP023377.1\|WP_004187003.1\|3223889_3224696_-\|putative-hydro-lyase	gnl\|CDD\|180100	PRK05463, PRK05463, putative hydro-lyase.	1.3902e-169
NZ_CP023377.1\|WP_004181707.1\|3225474_3226719_-\|divalent-metal-cation-transporter	gnl\|CDD\|224826	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism].	2.96159e-69
NZ_CP023377.1\|WP_000118797.1\|3209604_3210759_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP023377.1\|WP_001741442.1\|3204492_3205401_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	4.16456e-139
NZ_CP023377.1\|WP_000951213.1\|3210755_3211796_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0

>NZ_CP023377.1|WP_001091569.1|3213858_3215142_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>NZ_CP023377.1|WP_000767389.1|3213230_3213707_+|kinase-inhibitor
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>NZ_CP023377.1|WP_001300379.1|3211882_3213172_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>NZ_CP023377.1|WP_000951213.1|3210755_3211796_-|biotin-synthase-BioB
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>NZ_CP023377.1|WP_000118797.1|3209604_3210759_-|8-amino-7-oxononanoate-synthase
MSWQDKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWKQSAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>NZ_CP023377.1|WP_000246761.1|3208862_3209618_-|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>NZ_CP023377.1|WP_000044837.1|3208192_3208870_-|ATP-dependent-dethiobiotin-synthetase-BioD
MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>NZ_CP023377.1|WP_000042533.1|3205592_3207614_-|excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP023377.1|WP_001741442.1|3204492_3205401_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNVLEKALQALG
>NZ_CP023377.1|WP_001408763.1|3203106_3204096_-|GTP-3',8-cyclase-MoaA
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDAQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>NZ_CP023377.1|WP_088459819.1|3215375_3217460_-|hydratase
MTASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>NZ_CP023377.1|WP_004187010.1|3218624_3219089_+|hypothetical-protein
MNPIITTHQEIVIENSVRYIELLKSEATKILDEYWVTWKARNQLISQTTYANGGKFMPGRFAPVFKKVGSSQKLTIVWKDFSPRFKNKIEHHGVVVKPKLGGYSVSCFKNALDWELEMILKTENKIKPIRELLAEYHQRKLADIKRLEKLKRLI
>NZ_CP023377.1|WP_004187005.1|3220548_3222294_-|ATP-grasp-domain-containing-protein
MSAVATVPPHKVLVANRGEIAVRIIRACHEYGFASVAVYADPDVDSLHCRLAGEAWALPGSSPAETYLNIEQLIDVARRSEATMVHPGYGFLSERAEFARAVEAAGLIWIGPRPETIEQLGDKVQARKIAMAVGAPLVKGTPDPVSCAEDVIRFADEHGLPVAIKAAFGGGGRGLKVAWFREEIATLYQSAVSEALTAFGRGECYVEQYLDRPRHIEAQVIADEQGHVVVVGTRDCSLQRRNQKLVEEAPAPFLSAEIEAQIASAAQSICQRAGYRSAGTVEFLLGANGVLSFLEVNTRLQVEHPITEETSGLDLVKEQLRVAHGLPLSITTPPVPRGHAIELRINAEDPAKGFLPVPGTITRFDLPGGPGVRVDSGVTHGDTISGFYDSLMAKLVIWAPDRDQALARARQAVKAFRIEGVASVLPFHEAVLHSPDFTKSFSVHTRWIETDFSAELAEQVRPLPPGNSPLQRCWIEIDGRRHQLALPASFQAASGSAVPASLAETPQALQVAGAVTAPISGIVQRWLKTSGETVSEGETLAVMEAMKMEVPVLAARNGVLSIQIAAGESCQQDGVLGKVTP
>NZ_CP023377.1|WP_096037949.1|3222293_3223877_-|5-oxoprolinase/urea-amidolyase-family-protein
MRFLPCSLSSFLVELGTLDDTLALFAALQAAPLSGVEEIIPAARTLLIHFDPTLTQCHQLSAAIRQLDGQMQAQRTGKVVTIPVQYTGDDLAEMAEYLGLSVEALIQRHTGSLWQVAFCGFAPGFAYLVSREAGIQVPRRASPRTRIPAGSVGLAGEFSGIYPHASPGGWQIIGRTTETLFALDRQPPALLQPGMQVQFVDVTRAPVCVPVVKPQPLQQSASGSAVMSVISPGLQTLFQDAGRARQSSMGISPSGALDQAAWRRANWLVGNPGHLPALEITAGGFRARICAPMVVALTGAPCPVMVTRADGAHFTASTEAPLALEAGDQLRLGAPARGVRSYLARRGGWAVTPQLGSASRDTLAQVGPEPLQAGVKLYAGTTPPYSAVQPAVIGLPSLPAPGETITLDIIPGPRCDWFNDEALDRLTSQCWQVTPQSNRIGLRLQGELPLTRSDNRELPSEGTCIGAIQVPANGQPVLFLADHPLTGGYPVIGAVAHYHLDIAGQLPPNCQIRFRAIHPFTVFEEYK
>NZ_CP023377.1|WP_004187003.1|3223889_3224696_-|putative-hydro-lyase
MNINYPATPQALEEAAQARLRIRKGYDKPTAGMAPGMTQVNMIALPRDWAFDFLLYAQRNPQSCPVLDVLEAGQCHTMLAAGGRVDTDIPRYRVWRDGELAKEVTDAREIWQSHPDLVTFLIGCSFTFETPLMQAGIDVRHISEDCNVPMYRTNRPCREAGRLKGELVVSMRPVPAHQVADAVTITARYPAVHGAPVHIGEPQALGIQDINKPDFGDPVTLRPGEIPVFWACGVTPQAAVMASRVPFAVSHAPGHMFITDIPNAAWQQ
>NZ_CP023377.1|WP_004181708.1|3224692_3225466_-|LamB/YcsF-family-protein
MNTIDINSDLGESFGQWHMGDDARMLTVVSSANIACGFHAGDPAGMRATLKAAAANQVCCGAHVGYPDIQGFGRREMNMADDDLTASVIYQIGALAGLARAAGTRVSYVKPHGALYNTIAHDRRQGMAVINAIKDYNASLPLVVLAGSPLAQLAREQGLQVVAEAFADRAYHQDGTLVSRREAGAVLHDTQAIASRMVQLVREGGVVSVESVFTPISAQSICVHGDSPGAVEMAIKVRAALEQEGIQIAPFCPGEQQ
>NZ_CP023377.1|WP_004181707.1|3225474_3226719_-|divalent-metal-cation-transporter
MAVDNINQHKSFVQNRRSSLLAAIFLMATSAIGPGFITQTATFTATLGVAFAFGILASILIDFVVQQNIWRVVTLTQMNAAEVANRAIPGSGYLLAVLVIFGGLVFNIGNIAGAGLGLNALFGLSPKLGGLISAAIAIYIFASRRAGVALDRMLIALGVVMIVLTLYVALVSHPPLGMALRETVFPSNINFAAITTIVGGTVGGYISYAGAHRLLDKGISGKEHIKEVSSAANRGIIVVGIMRYVLFLAIFGVVASGVTIDLSSHNANPASQAFLAAAGNVGLRIFGIVLWAAALSSVVGAAWTSVSFISVFRPGITERQRNIATLIFIAFTLVVYLCLGTAPAALLVFAGGFNGLVLPLGLTLFLWVGWRRADLMDGYRYPRWLLWLGMITCIMTWYMAIMSVSTIFNFLKIA
>NZ_CP023377.1|WP_004181705.1|3227058_3227709_+|GntR-family-transcriptional-regulator
MREPAEPVLSEMIAQALRQKIIAGELLPGARLSERELTSQLDISRNTLREVFRLLTQEGLLRYQPNRGVCVAVPTDADIIDIYRIRRLIECDALRNAYPYHPAITMMERAVNEARRALREENWGEVGTANMQFHAAIVALSDSERLMRLYQHISAELRLAFGQLADKEMLHSPYVEKNAGIILLLKAGENGNAAATLETYLNISERTILAALARSR
>NZ_CP023377.1|WP_096037950.1|3228539_3229943_+|ATP-grasp-domain-containing-protein
MGDKVKARQLAKRVGTPLVAGTQDPVNSVVDVMKFAEQYGLPLVIKAAYGGGGRGMKVVWRREDIPELYVSAVREAVTAFGRGECFIERFLDRPRHIEAQVLADKYGNVQVLGTRDCSLQRRNQKLIEEAPAPFLSDEQRQRIHDAARELCREAAYCGAGTVEFLLSPEGEFSFLEVNTRLQVEHTVTEETTGIDLVIAQLEIARGKRLDNTETPPPHGHAFEFRINAEDPARGFLPVSGTISDFSPPSGIGIRLDSGVRTGSTVPPTFDSLLAKLIVWAPSREMALARARRALAEFKIEGLASVLPFHRAALQEPDFITAPFSVHTRWIETDFAVDLPLADRTLPAREESLTCVWIELDGKRVALGLPDSLLNGVTQPDAQPARPLRVNAGVVEAPISGVLLSWHVEESQQVSEGDPIAMMEAMKMETQLYAPCAGRITLRAAAGEMVTAGTMLADIHRDTDPMAS
>NZ_CP023377.1|WP_004186999.1|3229983_3230820_-|DUF1989-domain-containing-protein
MANYPAAYQSTSGSALDVDRDFYKALAEGPRELITSHLIPIRTGFAWEVPAGHLFRITTPEGPQVGDLNIWNRRDPRERMWVSRTRQLQRAHLSTYDRLWSNLPFIRPIATITADSLADYGIDSDGGRVHDLMGTRCDPYVNKLLTGEDFDFHCHSNLVRAVQPWGLTEFDVHDVMNVFQCTGLNDNDQYFMKACPAKKGDYLEFFAEIDLLCALSTCPGGDLSLPMWGEEAQDTLRVCRPLGVEIYKPQADLVANWTPPVSPDYRGNHGMQLKPVAW

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Crispr_ID: NZ_CP023377_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_8

3783629-3783725

Orphan

Consensus_repeat	Method
GCCAGCGTCGCATCAGGCATCCGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023377_8

>merge|NZ_CP023377|8|3783629-3783725|CRISPRCasFinder
GCCAGCGTCGCATCAGGCATCCGCGCACAATTGCCGGATGCGGCACAAGTTTGTAGGCACGATAAGACGCGCCAGCGTCGCATCAGGCATCTGCGCA

>NZ_CP023377|8|8|3783629-3783725|CRISPRCasFinder
GCCAGCGTCGCATCAGGCATCCGCGCA	CAATTGCCGGATGCGGCACAAGTTTGTAGGCACGATAAGACGC
GCCAGCGTCGCATCAGGCATCTGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_000615979.1\|3785623_3785902_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ	unknown	unknown	gnl\|CDD\|225583
NZ_CP023377.1\|WP_000006261.1\|3783728_3784226_-\|REP-associated-tyrosine-transposase-RayT	unknown	unknown	gnl\|CDD\|224854
NZ_CP023377.1\|WP_001338275.1\|3781773_3783513_+\|flagellar-type-III-secretion-system-protein-FlhA	unknown	unknown	gnl\|CDD\|224217
NZ_CP023377.1\|WP_001225679.1\|3786057_3786798_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP023377.1\|WP_001291990.1\|3775507_3775966_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236395
NZ_CP023377.1\|WP_001741233.1\|3781043_3781814_-\|putative-lateral-flagellar-export/assembly-protein-LafU	unknown	unknown	gnl\|CDD\|235860
NZ_CP023377.1\|WP_000333379.1\|3786768_3787536_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP023377.1\|WP_000973083.1\|3788559_3791004_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236528
NZ_CP023377.1\|WP_089578406.1\|3779171_3779570_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafO	unknown	unknown	gnl\|CDD\|236631
NZ_CP023377.1\|WP_096037973.1\|3776226_3777684_+\|cytosol-nonspecific-dipeptidase	unknown	unknown	gnl\|CDD\|184986
NZ_CP023377.1\|WP_001353765.1\|3784401_3785175_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP023377.1\|WP_000189541.1\|3774171_3775416_-\|esterase-FrsA	unknown	unknown	gnl\|CDD\|235337
NZ_CP023377.1\|WP_000532698.1\|3791046_3791520_-\|C-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|182187
NZ_CP023377.1\|WP_000284050.1\|3787741_3788320_-\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP023377.1\|WP_001226164.1\|3779917_3780973_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP023377.1\|WP_000554757.1\|3779572_3779866_-\|type-I-toxin-antitoxin-system-antitoxin-YafN	unknown	unknown	gnl\|CDD\|170091
NZ_CP023377.1\|WP_001059847.1\|3778709_3779162_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|182099
NZ_CP023377.1\|WP_001741226.1\|3791673_3792444_+\|2-oxoglutaramate-amidase	unknown	unknown	gnl\|CDD\|182461
NZ_CP023377.1\|WP_001321003.1\|3778209_3778476_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181972
NZ_CP023377.1\|WP_000729704.1\|3785360_3785621_+\|type-II-toxin-antitoxin-system-antitoxin-DinJ	unknown	unknown	gnl\|CDD\|225619

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_000615979.1\|3785623_3785902_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ	gnl\|CDD\|225583	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown].	8.29074e-42
NZ_CP023377.1\|WP_000006261.1\|3783728_3784226_-\|REP-associated-tyrosine-transposase-RayT	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.09955e-43
NZ_CP023377.1\|WP_001338275.1\|3781773_3783513_+\|flagellar-type-III-secretion-system-protein-FlhA	gnl\|CDD\|224217	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP023377.1\|WP_001225679.1\|3786057_3786798_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.07529e-116
NZ_CP023377.1\|WP_001291990.1\|3775507_3775966_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|236395	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated.	4.12435e-113
NZ_CP023377.1\|WP_001741233.1\|3781043_3781814_-\|putative-lateral-flagellar-export/assembly-protein-LafU	gnl\|CDD\|235860	PRK06778, PRK06778, hypothetical protein; Validated.	5.23351e-171
NZ_CP023377.1\|WP_000333379.1\|3786768_3787536_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.1374e-145
NZ_CP023377.1\|WP_000973083.1\|3788559_3791004_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_CP023377.1\|WP_089578406.1\|3779171_3779570_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafO	gnl\|CDD\|236631	PRK09885, PRK09885, type II toxin-antitoxin system YafO family toxin.	4.63381e-74
NZ_CP023377.1\|WP_096037973.1\|3776226_3777684_+\|cytosol-nonspecific-dipeptidase	gnl\|CDD\|184986	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional.	0
NZ_CP023377.1\|WP_001353765.1\|3784401_3785175_-\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.91548e-41
NZ_CP023377.1\|WP_000189541.1\|3774171_3775416_-\|esterase-FrsA	gnl\|CDD\|235337	PRK05077, frsA, esterase FrsA.	0
NZ_CP023377.1\|WP_000532698.1\|3791046_3791520_-\|C-lysozyme-inhibitor	gnl\|CDD\|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	9.39999e-93
NZ_CP023377.1\|WP_000284050.1\|3787741_3788320_-\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.61173e-142
NZ_CP023377.1\|WP_001226164.1\|3779917_3780973_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP023377.1\|WP_000554757.1\|3779572_3779866_-\|type-I-toxin-antitoxin-system-antitoxin-YafN	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	1.06302e-51
NZ_CP023377.1\|WP_001059847.1\|3778709_3779162_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|182099	PRK09831, PRK09831, GNAT family N-acetyltransferase.	6.94264e-105
NZ_CP023377.1\|WP_001741226.1\|3791673_3792444_+\|2-oxoglutaramate-amidase	gnl\|CDD\|182461	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.	0
NZ_CP023377.1\|WP_001321003.1\|3778209_3778476_-\|hypothetical-protein	gnl\|CDD\|181972	PRK09588, PRK09588, hypothetical protein; Reviewed.	1.93527e-42
NZ_CP023377.1\|WP_000729704.1\|3785360_3785621_+\|type-II-toxin-antitoxin-system-antitoxin-DinJ	gnl\|CDD\|225619	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair].	4.04445e-29

>NZ_CP023377.1|WP_001338275.1|3781773_3783513_+|flagellar-type-III-secretion-system-protein-FlhA
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAMVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLASMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM
>NZ_CP023377.1|WP_001741233.1|3781043_3781814_-|putative-lateral-flagellar-export/assembly-protein-LafU
MIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLNAKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR
>NZ_CP023377.1|WP_001226164.1|3779917_3780973_-|DNA-polymerase-IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
>NZ_CP023377.1|WP_000554757.1|3779572_3779866_-|type-I-toxin-antitoxin-system-antitoxin-YafN
MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEKYLNDMTDDDFNDFKE
>NZ_CP023377.1|WP_089578406.1|3779171_3779570_-|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafO
MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANVNNPFPPQLRQFSRTNDEAHFVYCQGAFDEQAWLLIAILKPEPHKQARDNNQMHKIGKMAEAFRMRF
>NZ_CP023377.1|WP_001059847.1|3778709_3779162_-|GNAT-family-N-acetyltransferase
MNNIQIRDYQPGDFQQLCAIFIRAVTMISSQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCVERYIDMLFVDPEYTRRGVACALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGTWFTNFYMRYKPQY
>NZ_CP023377.1|WP_001321003.1|3778209_3778476_-|hypothetical-protein
MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPTRRRCNGAGNRNGPLL
>NZ_CP023377.1|WP_096037973.1|3776226_3777684_+|cytosol-nonspecific-dipeptidase
MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQDILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHQVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIKSVGHYWTLLTELLKEIPAK
>NZ_CP023377.1|WP_001291990.1|3775507_3775966_-|xanthine-phosphoribosyltransferase
MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR
>NZ_CP023377.1|WP_000189541.1|3774171_3775416_-|esterase-FrsA
MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITDWIEKRLC
>NZ_CP023377.1|WP_000006261.1|3783728_3784226_-|REP-associated-tyrosine-transposase-RayT
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRNAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHTIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVERGLYPIDWAGDVTDINAGERIIL
>NZ_CP023377.1|WP_001353765.1|3784401_3785175_-|C40-family-peptidase
MHDQPLLRMSLPSIPSFVLSGLLLLCLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALVENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRVSRLAEPFWQDHFLGARRILTEETIL
>NZ_CP023377.1|WP_000729704.1|3785360_3785621_+|type-II-toxin-antitoxin-system-antitoxin-DinJ
MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDLFDKLGI
>NZ_CP023377.1|WP_000615979.1|3785623_3785902_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ
MIQRDIEYSGQFSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
>NZ_CP023377.1|WP_001225679.1|3786057_3786798_+|murein-L,D-transpeptidase
MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK
>NZ_CP023377.1|WP_000333379.1|3786768_3787536_-|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRAKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV
>NZ_CP023377.1|WP_000284050.1|3787741_3788320_-|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>NZ_CP023377.1|WP_000973083.1|3788559_3791004_+|acyl-CoA-dehydrogenase
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA
>NZ_CP023377.1|WP_000532698.1|3791046_3791520_-|C-lysozyme-inhibitor
MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK
>NZ_CP023377.1|WP_001741226.1|3791673_3792444_+|2-oxoglutaramate-amidase
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKSGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR

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Crispr_ID: NZ_CP023377_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023377_9

3995874-3996015

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023377_9

>merge|NZ_CP023377|9|3995874-3996015|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>NZ_CP023377|9|9|3995874-3996015|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023377.1\|WP_000692204.1\|3987442_3988213_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP023377.1\|WP_000543604.1\|4001543_4002365_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP023377.1\|WP_000347117.1\|3990230_3991373_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP023377.1\|WP_001295419.1\|3994454_3995240_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP023377.1\|WP_000333125.1\|3996044_3996440_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP023377.1\|WP_001091506.1\|3986486_3987428_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP023377.1\|WP_089551916.1\|4003511_4004462_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP023377.1\|WP_000083372.1\|4005037_4005532_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_CP023377.1\|WP_000203741.1\|3984865_3985153_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP023377.1\|WP_000597260.1\|3999939_4001088_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP023377.1\|WP_001286857.1\|4005531_4008348_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP023377.1\|WP_004014028.1\|3995245_3995836_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP023377.1\|WP_001239142.1\|4002531_4003446_-\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
NZ_CP023377.1\|WP_096037981.1\|3985149_3986436_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP023377.1\|WP_000767346.1\|4008390_4009332_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP023377.1\|WP_000004655.1\|4004463_4004913_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP023377.1\|WP_000349936.1\|3991501_3992719_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP023377.1\|WP_001126347.1\|3996700_3999922_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP023377.1\|WP_004014030.1\|3992792_3994346_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP023377.1\|WP_000787103.1\|3988685_3990200_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568

Protein	Function_ID	Function_description	E-value
NZ_CP023377.1\|WP_000692204.1\|3987442_3988213_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170
NZ_CP023377.1\|WP_000543604.1\|4001543_4002365_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	8.28292e-142
NZ_CP023377.1\|WP_000347117.1\|3990230_3991373_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP023377.1\|WP_001295419.1\|3994454_3995240_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	5.82869e-179
NZ_CP023377.1\|WP_000333125.1\|3996044_3996440_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
NZ_CP023377.1\|WP_001091506.1\|3986486_3987428_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP023377.1\|WP_089551916.1\|4003511_4004462_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP023377.1\|WP_000083372.1\|4005037_4005532_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	1.42141e-75
NZ_CP023377.1\|WP_000203741.1\|3984865_3985153_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP023377.1\|WP_000597260.1\|3999939_4001088_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP023377.1\|WP_001286857.1\|4005531_4008348_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP023377.1\|WP_004014028.1\|3995245_3995836_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	3.63583e-140
NZ_CP023377.1\|WP_001239142.1\|4002531_4003446_-\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
NZ_CP023377.1\|WP_096037981.1\|3985149_3986436_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP023377.1\|WP_000767346.1\|4008390_4009332_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.75152e-171
NZ_CP023377.1\|WP_000004655.1\|4004463_4004913_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	9.11961e-106
NZ_CP023377.1\|WP_000349936.1\|3991501_3992719_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP023377.1\|WP_001126347.1\|3996700_3999922_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP023377.1\|WP_004014030.1\|3992792_3994346_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP023377.1\|WP_000787103.1\|3988685_3990200_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0

>NZ_CP023377.1|WP_004014028.1|3995245_3995836_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPIVHPTAFVHPSAVLIGDVIVGAGVYIGLLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLIGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP023377.1|WP_001295419.1|3994454_3995240_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP023377.1|WP_004014030.1|3992792_3994346_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGICKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP023377.1|WP_000349936.1|3991501_3992719_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP023377.1|WP_000347117.1|3990230_3991373_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP023377.1|WP_000787103.1|3988685_3990200_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP023377.1|WP_000692204.1|3987442_3988213_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP023377.1|WP_001091506.1|3986486_3987428_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYASVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP023377.1|WP_096037981.1|3985149_3986436_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLVREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKIDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP023377.1|WP_000203741.1|3984865_3985153_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP023377.1|WP_000333125.1|3996044_3996440_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP023377.1|WP_001126347.1|3996700_3999922_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP023377.1|WP_000597260.1|3999939_4001088_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP023377.1|WP_000543604.1|4001543_4002365_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL
>NZ_CP023377.1|WP_001239142.1|4002531_4003446_-|ribonucleoside-hydrolase-RihC
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVLALAS
>NZ_CP023377.1|WP_089551916.1|4003511_4004462_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGIYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>NZ_CP023377.1|WP_000004655.1|4004463_4004913_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>NZ_CP023377.1|WP_000083372.1|4005037_4005532_-|lipoprotein-signal-peptidase
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
>NZ_CP023377.1|WP_001286857.1|4005531_4008348_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>NZ_CP023377.1|WP_000767346.1|4008390_4009332_-|bifunctional-riboflavin-kinase/FAD-synthetase
MKLIRGIHNLSQAPQEGYVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKLLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
NZ_CP023377_5	5.1\|2951704\|40\|NZ_CP023377\|CRISPRCasFinder	2951704-2951743	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
NZ_CP023377_2	2.7\|1034492\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034492-1034523	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
NZ_CP023377_2	2.8\|1034553\|32\|NZ_CP023377\|CRT	1034553-1034584	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	2	0.938
NZ_CP023377_1	1.9\|1006743\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006743-1006774	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
NZ_CP023377_1	1.9\|1006743\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006743-1006774	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
NZ_CP023377_1	1.9\|1006743\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006743-1006774	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
NZ_CP023377_1	1.20\|1006742\|33\|NZ_CP023377\|PILER-CR	1006742-1006774	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
NZ_CP023377_1	1.20\|1006742\|33\|NZ_CP023377\|PILER-CR	1006742-1006774	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
NZ_CP023377_1	1.20\|1006742\|33\|NZ_CP023377\|PILER-CR	1006742-1006774	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
NZ_CP023377_1	1.3\|1006377\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006377-1006408	32	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	118383-118414	5	0.844
NZ_CP023377_1	1.3\|1006377\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006377-1006408	32	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	118389-118420	5	0.844
NZ_CP023377_1	1.3\|1006377\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006377-1006408	32	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	118373-118404	5	0.844
NZ_CP023377_1	1.9\|1006743\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006743-1006774	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
NZ_CP023377_1	1.14\|1006376\|33\|NZ_CP023377\|PILER-CR	1006376-1006408	33	KU686197	Synechococcus phage S-CAM3 isolate 0808SB25, complete genome	118383-118415	6	0.818
NZ_CP023377_1	1.14\|1006376\|33\|NZ_CP023377\|PILER-CR	1006376-1006408	33	KU686199	Synechococcus phage S-CAM3 isolate 1010CC42, complete genome	118389-118421	6	0.818
NZ_CP023377_1	1.14\|1006376\|33\|NZ_CP023377\|PILER-CR	1006376-1006408	33	KU686198	Synechococcus phage S-CAM3 isolate 0910TB04, complete genome	118373-118405	6	0.818
NZ_CP023377_1	1.20\|1006742\|33\|NZ_CP023377\|PILER-CR	1006742-1006774	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
NZ_CP023377_1	1.10\|1006804\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006804-1006835	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
NZ_CP023377_2	2.8\|1034553\|32\|NZ_CP023377\|CRT	1034553-1034584	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	112768-112799	7	0.781
NZ_CP023377_1	1.5\|1006499\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006499-1006530	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1258843-1258874	8	0.75
NZ_CP023377_1	1.5\|1006499\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006499-1006530	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1258834-1258865	8	0.75
NZ_CP023377_1	1.10\|1006804\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006804-1006835	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
NZ_CP023377_1	1.13\|1006987\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006987-1007018	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
NZ_CP023377_1	1.21\|1006803\|33\|NZ_CP023377\|PILER-CR	1006803-1006835	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP023377_2	2.1\|1034126\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034126-1034157	32	MF773750	Mycobacterium phage OKCentral2016, complete genome	32038-32069	8	0.75
NZ_CP023377_2	2.1\|1034126\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034126-1034157	32	JX307704	Mycobacterium virus Goose, complete genome	32135-32166	8	0.75
NZ_CP023377_2	2.3\|1034248\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034248-1034279	32	NZ_CP042402	Weissella hellenica strain CBA3632 plasmid unnamed3, complete sequence	12282-12313	8	0.75
NZ_CP023377_2	2.4\|1034309\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034309-1034340	32	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	458381-458412	8	0.75
NZ_CP023377_2	2.4\|1034309\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034309-1034340	32	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	130817-130848	8	0.75
NZ_CP023377_2	2.8\|1034553\|32\|NZ_CP023377\|CRT	1034553-1034584	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	141278-141309	8	0.75
NZ_CP023377_2	2.8\|1034553\|32\|NZ_CP023377\|CRT	1034553-1034584	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1428097-1428128	8	0.75
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
NZ_CP023377_1	1.6\|1006560\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006560-1006591	32	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	433713-433744	9	0.719
NZ_CP023377_1	1.8\|1006682\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006682-1006713	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
NZ_CP023377_2	2.3\|1034248\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034248-1034279	32	CP003185	Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome	44776-44807	9	0.719
NZ_CP023377_2	2.3\|1034248\|32\|NZ_CP023377\|PILER-CR,CRISPRCasFinder,CRT	1034248-1034279	32	NC_019956	Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence	105005-105036	9	0.719
NZ_CP023377_6	6.3\|3094382\|32\|NZ_CP023377\|CRISPRCasFinder	3094382-3094413	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
NZ_CP023377_6	6.4\|3094443\|32\|NZ_CP023377\|CRISPRCasFinder	3094443-3094474	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
NZ_CP023377_6	6.6\|3094381\|33\|NZ_CP023377\|PILER-CR	3094381-3094413	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
NZ_CP023377_6	6.7\|3094442\|33\|NZ_CP023377\|PILER-CR	3094442-3094474	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
NZ_CP023377_8	8.1\|3783656\|43\|NZ_CP023377\|CRISPRCasFinder	3783656-3783698	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4037-4079	9	0.791
NZ_CP023377_8	8.1\|3783656\|43\|NZ_CP023377\|CRISPRCasFinder	3783656-3783698	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4036-4078	9	0.791
NZ_CP023377_8	8.1\|3783656\|43\|NZ_CP023377\|CRISPRCasFinder	3783656-3783698	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4036-4078	9	0.791
NZ_CP023377_8	8.1\|3783656\|43\|NZ_CP023377\|CRISPRCasFinder	3783656-3783698	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4036-4078	9	0.791
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
NZ_CP023377_1	1.6\|1006560\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006560-1006591	32	NZ_CP013423	Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence	53365-53396	10	0.688
NZ_CP023377_1	1.6\|1006560\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006560-1006591	32	NZ_CP019317	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-5, complete sequence	34609-34640	10	0.688
NZ_CP023377_1	1.9\|1006743\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006743-1006774	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
NZ_CP023377_1	1.9\|1006743\|32\|NZ_CP023377\|CRISPRCasFinder,CRT	1006743-1006774	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
NZ_CP023377_9	9.1\|3995926\|38\|NZ_CP023377\|CRISPRCasFinder	3995926-3995963	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
NZ_CP023377_1	1.20\|1006742\|33\|NZ_CP023377\|PILER-CR	1006742-1006774	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_CP023377_1	1.20\|1006742\|33\|NZ_CP023377\|PILER-CR	1006742-1006774	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667

1. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 5.1|2951704|40|NZ_CP023377|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

26. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

27. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

28. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

29. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

30. spacer 2.7|1034492|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

31. spacer 2.8|1034553|32|NZ_CP023377|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 2, identity: 0.938

ggcgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
*.*********************.********

32. spacer 1.9|1006743|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

33. spacer 1.9|1006743|32|NZ_CP023377|CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

34. spacer 1.9|1006743|32|NZ_CP023377|CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

35. spacer 1.20|1006742|33|NZ_CP023377|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

36. spacer 1.20|1006742|33|NZ_CP023377|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

37. spacer 1.20|1006742|33|NZ_CP023377|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

38. spacer 1.3|1006377|32|NZ_CP023377|CRISPRCasFinder,CRT matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

39. spacer 1.3|1006377|32|NZ_CP023377|CRISPRCasFinder,CRT matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

40. spacer 1.3|1006377|32|NZ_CP023377|CRISPRCasFinder,CRT matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 5, identity: 0.844

ttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
atttgtgatacagtaaacgtttgagtatctgc	Protospacer
 ******** ****** *********** *.*

41. spacer 1.9|1006743|32|NZ_CP023377|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

42. spacer 1.14|1006376|33|NZ_CP023377|PILER-CR matches to KU686197 (Synechococcus phage S-CAM3 isolate 0808SB25, complete genome) position: , mismatch: 6, identity: 0.818

gttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
aatttgtgatacagtaaacgtttgagtatctgc	Protospacer
. ******** ****** *********** *.*

43. spacer 1.14|1006376|33|NZ_CP023377|PILER-CR matches to KU686199 (Synechococcus phage S-CAM3 isolate 1010CC42, complete genome) position: , mismatch: 6, identity: 0.818

gttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
aatttgtgatacagtaaacgtttgagtatctgc	Protospacer
. ******** ****** *********** *.*

44. spacer 1.14|1006376|33|NZ_CP023377|PILER-CR matches to KU686198 (Synechococcus phage S-CAM3 isolate 0910TB04, complete genome) position: , mismatch: 6, identity: 0.818

gttttgtgattcagtaatcgtttgagtatgtac	CRISPR spacer
aatttgtgatacagtaaacgtttgagtatctgc	Protospacer
. ******** ****** *********** *.*

45. spacer 1.20|1006742|33|NZ_CP023377|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

46. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

47. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

48. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

49. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

50. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

51. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

52. spacer 1.10|1006804|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

53. spacer 2.8|1034553|32|NZ_CP023377|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgcactggatgcgatgatggat-atcacttg	CRISPR spacer
ggcgcactggctgcgatgaaggacgatcaacc-	Protospacer
********** ******** ***. **** ..

54. spacer 1.5|1006499|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgctgacgcagtaaaaagcggggcgtgattcg	CRISPR spacer
ctcggcagcagtaaaaagcggagcgtggttac	Protospacer
* * *  **************.*****.**

55. spacer 1.5|1006499|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgctgacgcagtaaaaagcggggcgtgattcg	CRISPR spacer
ctcggcagcagtaaaaagcggagcgtggttac	Protospacer
* * *  **************.*****.**

56. spacer 1.10|1006804|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

57. spacer 1.13|1006987|32|NZ_CP023377|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

58. spacer 1.21|1006803|33|NZ_CP023377|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

59. spacer 2.1|1034126|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 8, identity: 0.75

gagcgtagagattctcgaaaccgatccggacg	CRISPR spacer
cctcgtagagatcctcgaagccgatctcggcg	Protospacer
   *********.******.******. *.**

60. spacer 2.1|1034126|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 8, identity: 0.75

gagcgtagagattctcgaaaccgatccggacg	CRISPR spacer
cctcgtagagatcctcgaagccgatctcggcg	Protospacer
   *********.******.******. *.**

61. spacer 2.3|1034248|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042402 (Weissella hellenica strain CBA3632 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gtaataaaaaatattctatttctgctgaatca	CRISPR spacer
gtaataaaaaatctactatttctgattttaga	Protospacer
************ * ********* *     *

62. spacer 2.4|1034309|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cttgcgagcaaaagatccaggccgagaaagac	CRISPR spacer
aagccgagcaaaagatccaggcggtgaagggc	Protospacer
    ****************** * ***.*.*

63. spacer 2.4|1034309|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cttgcgagcaaaagatccaggccgagaaagac	CRISPR spacer
aagccgagcaaaagatccaggcggtgaagggc	Protospacer
    ****************** * ***.*.*

64. spacer 2.8|1034553|32|NZ_CP023377|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcactggatgcgatgatggatatcacttg	CRISPR spacer
ggcgcactggaaccgatgatggatgcgatgag	Protospacer
***********  ***********.. *.  *

65. spacer 2.8|1034553|32|NZ_CP023377|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcactggatgcgatgatggata---tcacttg	CRISPR spacer
ggcgcactggaagcggtgatggaggggcgcac---	Protospacer
*********** ***.******* .    ***

66. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

67. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

68. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

69. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

70. spacer 1.6|1006560|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 9, identity: 0.719

agtgccagcgccgcgcacgcctgatcatatgt	CRISPR spacer
tgcggtgacggcgcgcacgcctgatcagatgc	Protospacer
 *.* ...** **************** ***.

71. spacer 1.8|1006682|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
gaaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
* ********  *************..*  .

72. spacer 2.3|1034248|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to CP003185 (Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome) position: , mismatch: 9, identity: 0.719

gtaataaaaaatattctatttctgctgaatca	CRISPR spacer
ataataaataatattctgtttctgtgtgttta	Protospacer
.******* ********.******.  . *.*

73. spacer 2.3|1034248|32|NZ_CP023377|PILER-CR,CRISPRCasFinder,CRT matches to NC_019956 (Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence) position: , mismatch: 9, identity: 0.719

gtaataaaaaatattctatttctgctgaatca	CRISPR spacer
ataataaataatattctgtttctgtgtgttta	Protospacer
.******* ********.******.  . *.*

74. spacer 6.3|3094382|32|NZ_CP023377|CRISPRCasFinder matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

75. spacer 6.4|3094443|32|NZ_CP023377|CRISPRCasFinder matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

76. spacer 6.6|3094381|33|NZ_CP023377|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

77. spacer 6.7|3094442|33|NZ_CP023377|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

78. spacer 8.1|3783656|43|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

79. spacer 8.1|3783656|43|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

80. spacer 8.1|3783656|43|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

81. spacer 8.1|3783656|43|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

82. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

83. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

84. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

85. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

86. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

87. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

88. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

89. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

90. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

91. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

92. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

93. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

94. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

95. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

96. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

97. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

98. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

99. spacer 1.6|1006560|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP013423 (Burkholderia sp. MSMB0852 plasmid pMSMB0852, complete sequence) position: , mismatch: 10, identity: 0.688

agtgccagcgccgcgcacgcctgatcatatgt	CRISPR spacer
ttcgccagcgtcgcgaacgcctgatcggggat	Protospacer
  .*******.**** **********. . .*

100. spacer 1.6|1006560|32|NZ_CP023377|CRISPRCasFinder,CRT matches to NZ_CP019317 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-5, complete sequence) position: , mismatch: 10, identity: 0.688

agtgccagcgccgcgcacgcctgatcatatgt	CRISPR spacer
tgcgcccgcgccgcgcgcgcctgatcggggcg	Protospacer
 *.*** *********.*********. .

101. spacer 1.9|1006743|32|NZ_CP023377|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

102. spacer 1.9|1006743|32|NZ_CP023377|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

103. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

104. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

105. spacer 9.1|3995926|38|NZ_CP023377|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

106. spacer 1.20|1006742|33|NZ_CP023377|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

107. spacer 1.20|1006742|33|NZ_CP023377|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

515837 : 568916

uncultured_Caudovirales_phage(12.5%)

protease,tail,tRNA,transposase,integrase

attL 515654:515670|attR 525227:525243

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
515654:515670	attL	NA	NA	NA	NA
WP_000829625.1\|515837_517073_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	5.5e-123	54.2
WP_001439227.1\|517367_517547_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000754198.1\|517555_517837_+	hypothetical protein	NA	NA	NA	NA
WP_096038006.1\|517928_519509_+	virulence-associated E family protein	A0A193GYG9	Enterobacter_phage	3.9e-150	64.8
WP_000122089.1\|519518_519743_+	hypothetical protein	NA	NA	NA	NA
WP_000052065.1\|519745_520075_-	hypothetical protein	NA	NA	NA	NA
WP_001101854.1\|520509_521394_+	hypothetical protein	NA	NA	NA	NA
WP_000270231.1\|521396_521711_+	hypothetical protein	NA	NA	NA	NA
WP_032164858.1\|522093_522411_+	hypothetical protein	NA	NA	NA	NA
WP_000224730.1\|522413_522623_+	hypothetical protein	NA	NA	NA	NA
WP_000887033.1\|522632_522839_+	hypothetical protein	NA	NA	NA	NA
WP_001284540.1\|522860_525149_+\|tail	phage tail tape measure protein	A0A1W6JT50	Escherichia_phage	5.5e-161	42.9
WP_000462905.1\|525226_525523_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
525227:525243	attR	NA	NA	NA	NA
WP_001219652.1\|525548_526514_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_001145827.1\|526842_527724_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_096037749.1\|527735_529187_-	sodium/pantothenate symporter	NA	NA	NA	NA
WP_000381173.1\|529176_529419_-	YhdT family protein	NA	NA	NA	NA
WP_000884639.1\|529527_530877_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_000354622.1\|530887_531358_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_000838307.1\|532223_533054_-	hypothetical protein	NA	NA	NA	NA
WP_096037750.1\|533090_534065_-	oxidoreductase	NA	NA	NA	NA
WP_001241469.1\|534216_536157_+	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_000913396.1\|536461_537505_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_000802511.1\|537570_538674_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_000179405.1\|538673_539162_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_000203105.1\|539170_539764_+	nucleoside triphosphate pyrophosphatase YhdE	NA	NA	NA	NA
WP_000123197.1\|539753_541223_+	ribonuclease G	NA	NA	NA	NA
WP_096037751.1\|541290_545091_+	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_000055909.1\|545520_546966_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_000440317.1\|547099_548029_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_000051841.1\|548211_548415_+	AaeX family protein	NA	NA	NA	NA
WP_000854033.1\|548422_549355_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_024250105.1\|549360_551328_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_001029013.1\|551419_551692_+	barnase inhibitor	NA	NA	NA	NA
WP_000695690.1\|551747_552011_-	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_001257846.1\|552375_552846_-	transcriptional regulator ArgR	NA	NA	NA	NA
WP_001295272.1\|553280_554219_+	malate dehydrogenase	NA	NA	NA	NA
WP_000497723.1\|554281_555349_-	outer membrane-stress sensor serine endopeptidase DegS	A0A1S5Y2X3	uncultured_archaeal_virus	6.8e-05	24.2
WP_001295271.1\|555438_556806_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	2.3e-21	25.6
WP_001295270.1\|556959_557358_-	DUF1043 family protein	NA	NA	NA	NA
WP_001192312.1\|557551_558679_+	cell division protein ZapE	NA	NA	NA	NA
WP_000847559.1\|558897_559326_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_000829818.1\|559341_559734_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_000257293.1\|560128_560767_+	stringent starvation protein A	NA	NA	NA	NA
WP_000366129.1\|560772_561270_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	3.3e-26	42.9
WP_000467018.1\|561312_562680_-	anaerobic C4-dicarboxylate transporter DcuC	NA	NA	NA	NA
WP_000523845.1\|563059_563851_+	transcriptional regulator NanR	NA	NA	NA	NA
WP_000224714.1\|563972_564866_+	N-acetylneuraminate lyase	NA	NA	NA	NA
WP_032298177.1\|564974_566465_+	sialic acid transporter NanT	Q6JIH2	Burkholderia_virus	1.7e-09	23.6
WP_001300570.1\|566512_567202_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_000209020.1\|567198_568074_+	N-acetylmannosamine kinase	NA	NA	NA	NA
WP_000979881.1\|568070_568535_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000639208.1\|568610_568916_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

802962 : 823799

Escherichia_phage(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032248128.1\|802962_803910_-\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA
WP_000035052.1\|803961_807348_-\|holin	choline trimethylamine-lyase	A0A1S6UAD4	Serratia_phage	9.7e-05	45.0
WP_001288714.1\|807374_808529_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_000599365.1\|808544_808802_-	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_050491571.1\|808828_810415_-	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
WP_001206281.1\|810468_810747_-	BMC domain-containing protein	NA	NA	NA	NA
WP_000502010.1\|810761_811046_-	BMC domain-containing protein	NA	NA	NA	NA
WP_000502008.1\|811063_811342_-	BMC domain-containing protein	NA	NA	NA	NA
WP_001217009.1\|811861_812380_-	hypothetical protein	NA	NA	NA	NA
WP_001270145.1\|812379_813198_-	transcriptional regulator	NA	NA	NA	NA
WP_032298845.1\|813220_813799_-	TetR/AcrR family transcriptional regulator	A0A0R6PIB6	Moraxella_phage	3.8e-10	31.3
WP_096037760.1\|815710_816691_+\|transposase	IS5 family transposase	A0A077SK28	Escherichia_phage	2.8e-183	98.2
WP_001521630.1\|816963_818142_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_047928860.1\|818134_819586_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_047928859.1\|821177_822275_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	5.3e-37	35.4
WP_047928846.1\|822320_823301_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	7.5e-184	98.8
WP_000747051.1\|823448_823799_-\|transposase	transposase	Q716C1	Shigella_phage	1.8e-39	98.9

DBSCAN-SWA_3

1041977 : 1055160

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|1041977_1042739_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|1042732_1043359_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272590.1\|1043498_1044638_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|1044700_1045693_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_096037768.1\|1045786_1047151_-	GntP family transporter	NA	NA	NA	NA
WP_001136916.1\|1047239_1048016_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|1048020_1048659_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590390.1\|1048655_1049918_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	9.8e-136	61.4
WP_096037769.1\|1049914_1050823_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.9
WP_001295181.1\|1051018_1051786_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_096037770.1\|1051836_1052493_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	3.9e-51	47.0
WP_001272928.1\|1052598_1055160_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6

DBSCAN-SWA_4

1090241 : 1208243

114

Salmonella_phage(66.07%)

head,portal,tail,lysis,tRNA,capsid,terminase,integrase,plate

attL 1135040:1135085|attR 1169881:1169926

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000047184.1\|1090241_1092872_+\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	5.5e-80	38.6
WP_000906486.1\|1093106_1093292_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_000273290.1\|1094748_1095315_+	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	NA	NA	NA
WP_001287454.1\|1095311_1095740_+	DedA family protein	NA	NA	NA	NA
WP_000611804.1\|1095812_1097369_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_001130211.1\|1097518_1098034_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_001295176.1\|1098097_1099636_-	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	NA	NA
WP_001295175.1\|1099652_1100825_-	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	NA	NA
WP_000378442.1\|1100951_1101482_-	multidrug efflux transporter EmrAB transcriptional repressor EmrR	NA	NA	NA	NA
WP_000119763.1\|1101572_1101908_-	L-valine transporter subunit YgaH	NA	NA	NA	NA
WP_000445658.1\|1101897_1102635_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_000165699.1\|1102758_1103943_-	MFS transporter	NA	NA	NA	NA
WP_001216521.1\|1104134_1105127_-	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_000774988.1\|1105183_1106248_-	glycine betaine/L-proline ABC transporter permease ProW	NA	NA	NA	NA
WP_000985483.1\|1106240_1107443_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	4.9e-28	39.4
WP_000777969.1\|1107797_1108757_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.8
WP_096037773.1\|1108766_1110911_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.4e-195	48.5
WP_000080947.1\|1110883_1111294_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	4.6e-18	44.4
WP_001223227.1\|1111290_1111536_-	glutaredoxin-like protein NrdH	Q5K5J3	Oenococcus_phage	1.8e-06	35.3
WP_001295174.1\|1111783_1112113_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_000281320.1\|1112264_1112609_+	YgaC family protein	NA	NA	NA	NA
WP_000492656.1\|1112645_1113095_-	L-alanine exporter AlaE	NA	NA	NA	NA
WP_000115384.1\|1113762_1114167_+	DNA-binding protein StpA	NA	NA	NA	NA
WP_001229445.1\|1114213_1114738_-	thiosulfate sulfurtransferase YgaP	NA	NA	NA	NA
WP_000137280.1\|1114747_1115047_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000508177.1\|1115229_1115388_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_000522424.1\|1115471_1115921_+	potassium binding protein Kbp	A0A090DBR9	Clostridium_phage	2.0e-06	39.5
WP_096037774.1\|1115921_1116584_-	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA
WP_001295173.1\|1116604_1118005_-	GABA permease	NA	NA	NA	NA
WP_000097662.1\|1118242_1119523_-	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	1.4e-33	30.1
WP_000772820.1\|1119536_1120985_-	NADP-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000271962.1\|1121007_1122276_-	L-2-hydroxyglutarate oxidase	NA	NA	NA	NA
WP_033554103.1\|1122294_1123272_-	carbon starvation induced protein CsiD	NA	NA	NA	NA
WP_016242335.1\|1123607_1124612_-	hypothetical protein	NA	NA	NA	NA
WP_096037775.1\|1128016_1129390_+	DUF5507 domain-containing protein	NA	NA	NA	NA
WP_072097107.1\|1129753_1129963_+	recombinase family protein	A0A1S6L009	Salmonella_phage	1.3e-08	68.1
WP_001120794.1\|1130117_1130237_+	hypothetical protein	NA	NA	NA	NA
1135040:1135085	attL	NA	NA	NA	NA
WP_001513130.1\|1135307_1137065_+	deoxycytidylate deaminase	G3MA58	Bacillus_virus	8.6e-05	22.9
WP_000155496.1\|1137078_1138092_-\|integrase	site-specific integrase	E5G6L0	Salmonella_phage	1.6e-189	95.2
WP_024203614.1\|1138093_1138726_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	6.9e-106	90.5
WP_000102105.1\|1138845_1139088_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
WP_000460856.1\|1139120_1139630_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	1.3e-83	95.3
WP_000956182.1\|1139637_1139838_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
WP_001311552.1\|1139801_1140143_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.7e-55	98.2
WP_001513128.1\|1140210_1140444_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000752616.1\|1140443_1140671_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_001513126.1\|1140667_1141525_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.7e-161	97.5
WP_057688676.1\|1141521_1143936_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.0
WP_001154434.1\|1144088_1144277_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001513124.1\|1144287_1144521_+	DinI family protein	E5G6M1	Salmonella_phage	1.4e-35	98.7
WP_001513123.1\|1144935_1146018_+	AAA family ATPase	M4QMW8	Micromonas_pusilla_virus	4.3e-15	32.9
WP_001513122.1\|1146010_1148203_+	S8 family peptidase	NA	NA	NA	NA
WP_096037776.1\|1148241_1149291_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.6e-171	88.9
WP_001098422.1\|1149290_1151057_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.5
WP_001515566.1\|1151199_1152033_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.8e-123	85.2
WP_000742510.1\|1152049_1153108_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	3.8e-181	93.4
WP_000059191.1\|1153111_1153762_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_001513116.1\|1153857_1154322_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	3.2e-76	89.0
WP_000868175.1\|1154321_1154525_+\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000171568.1\|1154528_1154744_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_096038009.1\|1154763_1155237_+	lysozyme	E5G6N1	Salmonella_phage	8.3e-80	91.0
WP_001513114.1\|1155238_1155616_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	3.0e-16	40.0
WP_096037777.1\|1155612_1156041_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	2.4e-46	75.2
WP_001039937.1\|1156136_1156568_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.7
WP_001518815.1\|1156560_1157007_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.3e-62	84.9
WP_001513111.1\|1157075_1157654_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.5e-94	88.0
WP_057688674.1\|1157650_1158010_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	3.6e-51	85.7
WP_057108081.1\|1157996_1158905_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.0e-143	90.4
WP_057688673.1\|1158897_1159503_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	9.8e-110	91.5
WP_057688672.1\|1159499_1161251_+\|tail	phage tail protein	A0A0F7LDR4	Escherichia_phage	3.0e-82	49.4
WP_057688671.1\|1161250_1161664_+\|tail	phage tail protein	U5P0S4	Shigella_phage	1.5e-21	73.0
WP_057108085.1\|1161770_1162943_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.6e-204	90.3
WP_001504081.1\|1162952_1163468_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	4.8e-89	94.7
WP_001281016.1\|1163522_1163825_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	8.2e-41	90.0
WP_001513105.1\|1163839_1163959_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.2e-13	84.6
WP_096037778.1\|1163951_1167029_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.8
WP_000980397.1\|1167025_1167511_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	2.2e-67	81.2
WP_057688670.1\|1167507_1168608_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.8e-176	87.7
WP_000980504.1\|1168676_1168892_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	2.1e-22	70.8
WP_001513102.1\|1168994_1169708_-	hypothetical protein	NA	NA	NA	NA
WP_000162574.1\|1170458_1170941_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
1169881:1169926	attR	NA	NA	NA	NA
WP_000600189.1\|1171072_1171549_+	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_001117838.1\|1171538_1171829_+	RnfH family protein	NA	NA	NA	NA
WP_001203437.1\|1171890_1172232_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_000880910.1\|1172380_1174042_-	DNA repair protein RecN	NA	NA	NA	NA
WP_001059169.1\|1174127_1175006_-	NAD(+) kinase	NA	NA	NA	NA
WP_001296310.1\|1175128_1175722_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_010723175.1\|1175776_1177063_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_096038010.1\|1177083_1177875_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_000460035.1\|1178041_1179403_+	signal recognition particle protein	NA	NA	NA	NA
WP_000256450.1\|1179539_1179788_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_000043335.1\|1179806_1180355_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_033554046.1\|1180385_1181153_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000065253.1\|1181194_1181542_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_000589828.1\|1181617_1182100_-	OmpA family protein	NA	NA	NA	NA
WP_000969010.1\|1182115_1183342_-	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_001212391.1\|1183331_1183850_-	YfiR family protein	NA	NA	NA	NA
WP_000976004.1\|1183999_1184365_-	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001168045.1\|1184574_1185645_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_000225221.1\|1185655_1186777_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_000200120.1\|1186819_1187980_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_001386991.1\|1188077_1188125_-	hypothetical protein	NA	NA	NA	NA
WP_000178456.1\|1188228_1188570_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_000197686.1\|1188840_1189578_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000079100.1\|1189712_1190693_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000040129.1\|1190689_1191421_+	polyphenol oxidase	NA	NA	NA	NA
WP_001235102.1\|1191550_1194124_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000841103.1\|1199987_1201286_+	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
WP_001295360.1\|1201282_1201606_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_000949265.1\|1201651_1203007_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_000083015.1\|1203120_1205781_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_001301152.1\|1205812_1206511_-	DTW domain-containing protein	NA	NA	NA	NA
WP_001098726.1\|1206579_1206999_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_000997403.1\|1207205_1208243_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_5

1702810 : 1711119

Enterobacteria_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569357.1\|1702810_1703737_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8
WP_096037809.1\|1703741_1704473_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|1704453_1704561_-	protein YohO	NA	NA	NA	NA
WP_001240401.1\|1704620_1705352_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001295431.1\|1705573_1707259_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|1707255_1707975_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|1708021_1708492_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001702450.1\|1708532_1708994_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
WP_096037810.1\|1709118_1711119_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3

DBSCAN-SWA_6

1880127 : 1890752

Enterobacterial_phage(33.33%)

integrase,transposase,tail

attL 1879954:1880013|attR 1893745:1893808

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1879954:1880013	attL	NA	NA	NA	NA
WP_047633075.1\|1880127_1881102_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	8.0e-170	86.6
WP_152953564.1\|1881091_1881250_-	hypothetical protein	NA	NA	NA	NA
WP_047633073.1\|1881377_1882163_-	hypothetical protein	A4JX52	Burkholderia_virus	3.1e-63	51.0
WP_047928777.1\|1882162_1882462_-	hypothetical protein	K7PJS4	Enterobacterial_phage	3.2e-13	47.6
WP_096037820.1\|1883006_1883987_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	5.7e-184	98.8
WP_004184740.1\|1884281_1884758_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	2.0e-12	45.3
WP_004202052.1\|1884859_1885123_+	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	1.8e-12	46.6
WP_024250321.1\|1885151_1885604_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.3e-66	87.2
WP_053274530.1\|1886480_1887323_+\|tail	phage tail protein	K7PKN5	Enterobacterial_phage	1.6e-17	42.8
WP_000901073.1\|1887301_1888393_-	acyltransferase	NA	NA	NA	NA
WP_001565623.1\|1888757_1890752_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	2.4e-27	27.2
1893745:1893808	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2269445 : 2318852

Escherichia_phage(27.59%)

protease,tail,lysis,transposase,holin,integrase

attL 2277021:2277037|attR 2305989:2306005

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260849.1\|2269445_2270267_-\|protease	serine protease	NA	NA	NA	NA
WP_000233090.1\|2270366_2270450_-	hypothetical protein	NA	NA	NA	NA
WP_000743952.1\|2270542_2270878_-	acid shock protein	NA	NA	NA	NA
WP_000091840.1\|2271274_2272528_-	MFS transporter	NA	NA	NA	NA
WP_096037838.1\|2272634_2273528_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000225262.1\|2273662_2274883_+	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_000919231.1\|2275007_2275703_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_071607222.1\|2275655_2276948_-	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
2277021:2277037	attL	NA	NA	NA	NA
WP_096037839.1\|2277106_2277721_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	3.3e-28	36.3
WP_000526503.1\|2277763_2278618_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000213028.1\|2278619_2279237_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
WP_001433342.1\|2279247_2281671_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	2.8e-208	48.6
WP_096037840.1\|2281731_2284158_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-213	49.2
WP_001300836.1\|2284356_2284662_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_001321287.1\|2284769_2285480_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_001138581.1\|2285482_2286043_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_000705211.1\|2286077_2286419_-	DUF1283 family protein	NA	NA	NA	NA
WP_000598292.1\|2286553_2286880_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_001295394.1\|2287085_2288300_+	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000836067.1\|2288311_2289331_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001360138.1\|2289388_2289499_+	hypothetical protein	NA	NA	NA	NA
WP_000877007.1\|2289518_2290799_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	7.3e-155	62.1
WP_001296941.1\|2290833_2291070_-	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_033873403.1\|2291157_2293629_-	exonuclease	A0A192Y6E0	Salmonella_phage	3.2e-58	56.1
WP_001083273.1\|2293722_2293914_-\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_096037841.1\|2293910_2294099_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001328010.1\|2294514_2294802_+	hypothetical protein	NA	NA	NA	NA
WP_023281935.1\|2294770_2295136_-	hypothetical protein	NA	NA	NA	NA
WP_050491573.1\|2295147_2295273_-	DUF1391 family protein	NA	NA	NA	NA
WP_000705349.1\|2295348_2295870_+	hypothetical protein	NA	NA	NA	NA
WP_000054483.1\|2295850_2296816_+	hypothetical protein	U5P0A0	Shigella_phage	2.6e-56	60.8
WP_085947917.1\|2297143_2298417_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_073511943.1\|2298462_2298591_+	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	2.5e-15	85.7
WP_032298921.1\|2299309_2300359_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.3e-113	57.9
WP_001204787.1\|2300376_2300754_+	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-53	82.5
WP_000780584.1\|2300909_2301434_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	1.0e-46	52.9
WP_000592549.1\|2301626_2302586_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_001146313.1\|2302992_2303706_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000839588.1\|2303896_2304112_+\|holin	holin	A5LH82	Enterobacteria_phage	1.2e-30	91.5
WP_000189900.1\|2304116_2304668_+	YdfR family protein	Q08JA0	Stx2-converting_phage	1.0e-36	51.1
WP_001557934.1\|2304615_2304876_-	hypothetical protein	NA	NA	NA	NA
WP_001101173.1\|2304989_2305523_+	lysozyme	K7PLY1	Enterobacteria_phage	1.4e-96	93.8
WP_001071778.1\|2305519_2306017_+	DUF2514 domain-containing protein	NA	NA	NA	NA
2305989:2306005	attR	NA	NA	NA	NA
WP_000072434.1\|2306380_2306593_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	2.4e-23	75.7
WP_071528545.1\|2306603_2306792_+	cold-shock protein	NA	NA	NA	NA
WP_001443523.1\|2306938_2307094_+	hypothetical protein	NA	NA	NA	NA
WP_001019207.1\|2307266_2307440_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000548593.1\|2307733_2307940_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	3.4e-22	79.4
WP_140047246.1\|2309076_2311428_+	DUF1983 domain-containing protein	A0A291AWT4	Escherichia_phage	0.0e+00	85.9
WP_001233123.1\|2311495_2312095_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	2.2e-106	95.5
WP_085947917.1\|2315200_2316473_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_096038012.1\|2316451_2317258_+	chaperone of endosialidase	K7PGT9	Enterobacteria_phage	4.1e-127	93.0
WP_072133544.1\|2317312_2317432_+\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	1.1e-12	89.7
WP_096037842.1\|2317529_2318120_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.3e-25	38.8
WP_000836768.1\|2318436_2318670_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_120795384.1\|2318738_2318852_-	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6

DBSCAN-SWA_8

2447117 : 2567325

121

Escherichia_phage(39.71%)

head,coat,tail,lysis,tRNA,terminase,transposase,integrase

attL 2439538:2439554|attR 2559718:2559734

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2439538:2439554	attL	NA	NA	NA	NA
WP_000826416.1\|2447117_2448326_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SL42	Escherichia_phage	1.7e-206	93.0
WP_001261013.1\|2448857_2449526_-	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_000586744.1\|2449828_2450422_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_001301046.1\|2450418_2451411_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_001234053.1\|2451534_2452515_+	LbetaH domain-containing protein	NA	NA	NA	NA
WP_000140885.1\|2452509_2453046_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_001296778.1\|2453108_2453333_-	YdcH family protein	NA	NA	NA	NA
WP_000375956.1\|2453472_2455128_-	glucan biosynthesis protein	NA	NA	NA	NA
WP_000013759.1\|2455352_2456696_-	VOC family protein	NA	NA	NA	NA
WP_000414564.1\|2456912_2457836_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_096037852.1\|2457873_2459514_-	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_085947770.1\|2459889_2461258_+\|transposase	IS3-like element IS150 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.3e-112	100.0
WP_001309484.1\|2461358_2461508_+	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_000731833.1\|2461579_2461753_-	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_000428998.1\|2461997_2462528_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
WP_000048667.1\|2462716_2463718_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_033554315.1\|2463759_2465199_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_033554317.1\|2465395_2466196_-	YdcF family protein	NA	NA	NA	NA
WP_024250173.1\|2466467_2470370_-	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
WP_000048950.1\|2470570_2471176_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_000627356.1\|2471229_2472546_-	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA
WP_047928696.1\|2472535_2474197_-	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000752043.1\|2475167_2475494_-	YdbL family protein	NA	NA	NA	NA
WP_000698145.1\|2475501_2475687_-	YnbE family lipoprotein	NA	NA	NA	NA
WP_033554175.1\|2475683_2478323_-	YdbH family protein	NA	NA	NA	NA
WP_077473150.1\|2478530_2479520_+	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	5.1e-71	44.3
WP_001298828.1\|2479630_2480053_+	heat shock protein HslJ	NA	NA	NA	NA
WP_001295715.1\|2480049_2480316_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_000628174.1\|2480589_2484114_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_000837924.1\|2484479_2485613_+	porin OmpN	Q1MVN1	Enterobacteria_phage	8.3e-118	58.8
WP_001300461.1\|2485753_2486188_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.8e-28	52.8
WP_000286867.1\|2486773_2487688_+	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_012565075.1\|2489081_2489441_-	hypothetical protein	NA	NA	NA	NA
WP_096037853.1\|2489604_2490555_-	hypothetical protein	A0A059VG08	Pseudomonas_phage	3.4e-56	39.0
WP_047632210.1\|2490581_2490974_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_021564336.1\|2490970_2491351_-	hypothetical protein	A0A059VF88	Pseudomonas_phage	1.9e-18	43.6
WP_047632215.1\|2491351_2491735_-	hypothetical protein	A0A059VA70	Pseudomonas_phage	1.2e-15	40.0
WP_047632218.1\|2491734_2492130_-	hypothetical protein	NA	NA	NA	NA
WP_000908083.1\|2492133_2492358_-	hypothetical protein	G8C7P8	Escherichia_phage	5.6e-10	52.7
WP_096037854.1\|2492400_2493540_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	2.8e-158	74.7
WP_096037855.1\|2493638_2494403_-	hypothetical protein	G8C7P6	Escherichia_phage	3.3e-86	66.1
WP_096037856.1\|2494507_2495620_-	hypothetical protein	I6PD76	Cronobacter_phage	1.3e-112	54.8
WP_021546823.1\|2495603_2497010_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	6.1e-187	69.0
WP_096002867.1\|2497012_2498314_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.7e-149	59.6
WP_053287081.1\|2498294_2499389_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	9.1e-114	80.5
WP_000126790.1\|2499392_2499602_-	hypothetical protein	NA	NA	NA	NA
WP_096037857.1\|2499579_2500512_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	7.8e-82	54.2
WP_096037858.1\|2500504_2501293_-	ParB N-terminal domain-containing protein	R4TG31	Halovirus	7.4e-49	40.9
WP_001741602.1\|2501429_2502887_-	trk system potassium uptake protein trkG	NA	NA	NA	NA
WP_001228696.1\|2503083_2503269_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.8e-15	98.2
WP_001135274.1\|2503485_2503983_-	lysozyme	M1FJA0	Enterobacteria_phage	3.2e-90	97.0
WP_000839599.1\|2503982_2504198_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	2.0e-33	98.6
WP_000334743.1\|2504454_2504694_-	hypothetical protein	NA	NA	NA	NA
WP_001741631.1\|2505371_2505914_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.8e-77	75.7
WP_096037859.1\|2505910_2506201_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.4e-45	87.5
WP_001406929.1\|2506200_2506800_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.0e-110	95.5
WP_032218041.1\|2506866_2507127_-	hypothetical protein	NA	NA	NA	NA
WP_001406927.1\|2507372_2507528_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.9e-17	94.1
WP_122990642.1\|2507630_2507738_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	3.2e-08	96.6
WP_073511864.1\|2508131_2510693_-	hypothetical protein	NA	NA	NA	NA
WP_077897036.1\|2512376_2513912_-	hypothetical protein	NA	NA	NA	NA
WP_073511867.1\|2514263_2514680_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	7.6e-61	88.1
WP_096037860.1\|2514696_2515422_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.7e-82	65.2
WP_096037861.1\|2515405_2516191_-	ATP-binding protein	V5UQI5	Shigella_phage	9.5e-113	80.1
WP_096037862.1\|2516197_2516992_-	hypothetical protein	G9L6A8	Escherichia_phage	5.7e-41	65.9
WP_032218026.1\|2517070_2517493_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	4.4e-64	90.0
WP_001406917.1\|2517476_2517704_-	transcriptional regulator	NA	NA	NA	NA
WP_073511871.1\|2517781_2518189_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.6e-23	45.4
WP_001406915.1\|2518376_2518655_+	hypothetical protein	NA	NA	NA	NA
WP_052318727.1\|2518786_2518942_+	DUF1391 family protein	M4QQ57	Salicola_phage	1.0e-07	55.3
WP_000288022.1\|2518938_2519367_-	superinfection exclusion protein B	NA	NA	NA	NA
WP_000560223.1\|2519869_2520091_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_077897037.1\|2520090_2520261_+	hypothetical protein	A0A0U2SHB5	Escherichia_phage	3.6e-17	73.2
WP_000632297.1\|2520335_2520611_+	protein RacC	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
WP_023281732.1\|2520712_2523313_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	1.0e-248	63.5
WP_000166322.1\|2523305_2524139_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	7.2e-95	66.8
WP_072130784.1\|2524195_2524390_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	9.3e-30	92.2
WP_001302840.1\|2524382_2524571_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
WP_000079604.1\|2524670_2524886_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000040843.1\|2524887_2526123_+\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	1.3e-238	98.5
WP_001157377.1\|2526174_2527110_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.8e-148	100.0
WP_000123737.1\|2527238_2528612_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000387388.1\|2529089_2530073_-	zinc transporter ZntB	NA	NA	NA	NA
WP_000628058.1\|2530327_2531560_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
WP_001046829.1\|2531580_2532144_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_033554177.1\|2532473_2532836_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000444949.1\|2533011_2534322_+	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_001156451.1\|2534321_2535767_+	amidohydrolase	NA	NA	NA	NA
WP_096038013.1\|2537398_2540371_-	peptidase S74	A0A2D1UII2	Escherichia_phage	0.0e+00	75.5
WP_063117436.1\|2546292_2546823_-\|tail	tail assembly protein	H6WRW3	Salmonella_phage	8.2e-36	51.2
WP_096037863.1\|2546765_2547497_-\|tail	phage tail protein	Q5G8W2	Enterobacteria_phage	1.8e-86	61.0
WP_096037864.1\|2547499_2548204_-\|tail	phage minor tail protein L	A0A1V0E5N2	Salmonella_phage	2.6e-98	72.1
WP_096038014.1\|2548332_2548488_+	transporter	NA	NA	NA	NA
WP_096037865.1\|2548500_2548851_+	hypothetical protein	NA	NA	NA	NA
WP_096037866.1\|2548860_2549124_+	hypothetical protein	NA	NA	NA	NA
WP_096037867.1\|2549117_2549321_+	hypothetical protein	NA	NA	NA	NA
WP_157739708.1\|2549411_2549549_+	hypothetical protein	NA	NA	NA	NA
WP_096037869.1\|2549778_2550132_-\|tail	phage tail protein	I6RSL7	Salmonella_phage	3.1e-39	68.7
WP_096037870.1\|2550478_2550733_+	hypothetical protein	NA	NA	NA	NA
WP_157739710.1\|2550852_2551029_+	hypothetical protein	NA	NA	NA	NA
WP_096037871.1\|2551061_2553410_-	tape measure protein	A0A291AXC6	Shigella_phage	3.8e-56	36.3
WP_096037872.1\|2553666_2554017_+	hypothetical protein	NA	NA	NA	NA
WP_096037873.1\|2554135_2554438_+	hypothetical protein	NA	NA	NA	NA
WP_096037874.1\|2554452_2555133_-	hypothetical protein	I6R0Q2	Salmonella_phage	2.9e-41	40.1
WP_096037875.1\|2555187_2555664_-	hypothetical protein	H6WRU1	Salmonella_phage	1.3e-51	62.9
WP_021519047.1\|2555677_2556064_-	hypothetical protein	Q5G8X4	Enterobacteria_phage	2.8e-41	62.5
WP_096037876.1\|2556060_2556501_-	hypothetical protein	A0A1V0E5P5	Salmonella_phage	1.1e-36	55.2
WP_096037877.1\|2556512_2556899_-	hypothetical protein	NA	NA	NA	NA
WP_021519044.1\|2556891_2557077_-	hypothetical protein	NA	NA	NA	NA
WP_096037878.1\|2557079_2557466_-	hypothetical protein	A0A1V0E5R0	Salmonella_phage	4.3e-42	64.1
WP_096037879.1\|2557532_2558585_-	hypothetical protein	Q5G8Y0	Enterobacteria_phage	1.2e-126	62.4
WP_096037880.1\|2558604_2559006_-	hypothetical protein	A0A1V0E5Q8	Salmonella_phage	1.4e-27	48.9
WP_096037881.1\|2559017_2560304_-	hypothetical protein	A0A1V0E5Q9	Salmonella_phage	1.3e-114	54.2
2559718:2559734	attR	NA	NA	NA	NA
WP_096038015.1\|2560294_2561191_-\|head	phage head morphogenesis protein	H6WRT1	Salmonella_phage	4.2e-72	49.8
WP_096037882.1\|2561180_2562551_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	1.3e-146	59.5
WP_096037883.1\|2562629_2564108_-	DNA-packaging protein	G0ZND4	Cronobacter_phage	4.9e-203	69.8
WP_096037884.1\|2564110_2564596_-	DNA-binding protein	Q716H4	Shigella_phage	8.9e-21	40.5
WP_096037885.1\|2565310_2565895_-	hypothetical protein	C6ZR72	Salmonella_phage	9.1e-20	41.7
WP_096037886.1\|2566173_2566656_-\|lysis	lysis protein	NA	NA	NA	NA
WP_096037887.1\|2566631_2567123_-	lysozyme	A0A2I6TCA1	Escherichia_phage	3.6e-54	62.2
WP_000460269.1\|2567124_2567325_-	hypothetical protein	A0A1V0E5H9	Salmonella_phage	4.3e-06	47.1

DBSCAN-SWA_9

2571239 : 2592915

Salmonella_phage(31.58%)

integrase

attL 2572729:2572742|attR 2594068:2594081

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096037898.1\|2571239_2571452_-	hypothetical protein	A0A1P8DTK9	Salmonella_phage	3.4e-09	49.3
WP_096037899.1\|2571455_2571755_-	RNA-binding protein	I6S5Y4	Salmonella_phage	1.1e-24	62.4
WP_096037900.1\|2571744_2572017_-	hypothetical protein	NA	NA	NA	NA
WP_096037901.1\|2572006_2572354_-	hypothetical protein	NA	NA	NA	NA
WP_096037902.1\|2572340_2572547_-	hypothetical protein	NA	NA	NA	NA
WP_096037903.1\|2572543_2573266_-	antitermination protein	A0A0M4RTW7	Salmonella_phage	5.8e-40	36.6
2572729:2572742	attL	NA	NA	NA	NA
WP_096037904.1\|2573265_2573448_-	hypothetical protein	NA	NA	NA	NA
WP_096037905.1\|2573450_2573852_-	RusA family crossover junction endodeoxyribonuclease	F1C5C9	Cronobacter_phage	1.1e-37	58.7
WP_096037906.1\|2573848_2574454_-	protein NinG	G0ZNC4	Cronobacter_phage	6.5e-45	54.1
WP_096037907.1\|2574803_2575586_-	DNA cytosine methyltransferase	S4TQH6	Salmonella_virus	1.2e-83	60.7
WP_096037908.1\|2575582_2576086_-	hypothetical protein	NA	NA	NA	NA
WP_096038017.1\|2576556_2577096_-	phage N-6-adenine-methyltransferase	H6WCM2	Enterobacteria_phage	2.3e-102	93.3
WP_063117438.1\|2577107_2577341_-	hypothetical protein	H6WCM1	Enterobacteria_phage	1.5e-34	92.2
WP_063117391.1\|2577343_2577571_-	hypothetical protein	NA	NA	NA	NA
WP_063117390.1\|2577572_2577776_-	hypothetical protein	H6WCL9	Enterobacteria_phage	3.7e-29	82.1
WP_063117389.1\|2577765_2577960_-	hypothetical protein	NA	NA	NA	NA
WP_096037909.1\|2578058_2578277_-	hypothetical protein	NA	NA	NA	NA
WP_096037910.1\|2578376_2578997_-	hypothetical protein	NA	NA	NA	NA
WP_096037911.1\|2579009_2579342_-	hypothetical protein	NA	NA	NA	NA
WP_086611455.1\|2579331_2579523_-	hypothetical protein	NA	NA	NA	NA
WP_096037912.1\|2579513_2579786_-	toxin-antitoxin system toxin subunit	NA	NA	NA	NA
WP_096037913.1\|2580013_2580238_-	hypothetical protein	NA	NA	NA	NA
WP_063117383.1\|2580252_2580531_-	hypothetical protein	NA	NA	NA	NA
WP_096037914.1\|2580546_2580963_-	single-stranded DNA-binding protein	H9C0R6	Aeromonas_phage	4.1e-22	50.5
WP_096037915.1\|2580962_2581604_-	ERF family protein	I6RSN3	Salmonella_phage	3.6e-54	54.0
WP_096037916.1\|2581753_2582044_-	hypothetical protein	NA	NA	NA	NA
WP_063117379.1\|2582547_2583195_-	helix-turn-helix domain-containing protein	A0A286S2B2	Klebsiella_phage	3.7e-54	51.8
WP_096037917.1\|2583501_2583756_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_096037918.1\|2583758_2584805_+	DUF4373 domain-containing protein	A0A2I7RBL5	Vibrio_phage	1.3e-45	46.8
WP_096037919.1\|2585944_2587063_+	hypothetical protein	A0A1X7QGR9	Escherichia_phage	8.1e-150	65.8
WP_096037920.1\|2587081_2588497_+	AAA family ATPase	A0A192Y673	Salmonella_phage	7.1e-143	57.9
WP_157739712.1\|2588573_2589101_+	hypothetical protein	NA	NA	NA	NA
WP_096037923.1\|2589313_2589511_+	hypothetical protein	NA	NA	NA	NA
WP_096037924.1\|2589507_2589939_+	recombination protein NinB	A0A1I9KFA6	Aeromonas_phage	7.9e-29	45.0
WP_096037925.1\|2590116_2590770_+	hypothetical protein	NA	NA	NA	NA
WP_074152517.1\|2590769_2590988_+	hypothetical protein	A0A1P8DTG1	Proteus_phage	1.6e-09	42.9
WP_096038018.1\|2590945_2592181_-\|integrase	site-specific integrase	I6R9B6	Salmonella_phage	3.9e-97	44.9
WP_033554179.1\|2592399_2592915_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.4e-24	42.8
2594068:2594081	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2783086 : 2836730

Escherichia_phage(46.67%)

head,protease,tail,portal,tRNA,capsid,terminase,transposase,holin,integrase

attL 2832947:2832963|attR 2847676:2847692

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001297484.1\|2783086_2784193_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_001297479.1\|2784228_2784870_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000423742.1\|2784873_2786244_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001265471.1\|2786412_2787084_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000735409.1\|2787083_2788544_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001295435.1\|2788619_2789741_+	cupin domain-containing protein	NA	NA	NA	NA
WP_000359441.1\|2789789_2791016_-	peptidase T	NA	NA	NA	NA
WP_000531601.1\|2791265_2792402_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	9.4e-29	39.8
WP_000799406.1\|2792385_2793249_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_122990631.1\|2793803_2794472_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_096037929.1\|2794709_2798486_-	peptidase S74	A0A2D1UII2	Escherichia_phage	0.0e+00	80.1
WP_086624042.1\|2798550_2799150_-	Ail/Lom family outer membrane beta-barrel protein	A5LH44	Enterobacteria_phage	2.8e-109	97.0
WP_096037930.1\|2799216_2802699_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.9
WP_074180489.1\|2802759_2803407_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.0e-108	94.9
WP_001312811.1\|2803304_2804048_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.1e-150	98.0
WP_021570076.1\|2804053_2804752_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	1.8e-131	97.8
WP_001330090.1\|2804751_2805108_-\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.8e-40	66.7
WP_089648138.1\|2805085_2808313_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.2
WP_074185540.1\|2808359_2808620_-	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	1.0e-39	96.5
WP_077249358.1\|2808661_2809048_-\|tail	phage tail protein	A0A1B5FP91	Escherichia_phage	2.6e-63	99.2
WP_000097524.1\|2809047_2809752_-	hypothetical protein	A0A1B5FP82	Escherichia_phage	1.7e-113	93.6
WP_001206307.1\|2809811_2810156_-	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	3.9e-55	96.5
WP_000968644.1\|2810152_2810602_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	6.1e-64	81.2
WP_021570071.1\|2810598_2810937_-\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	1.7e-50	89.3
WP_000719066.1\|2810945_2811263_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	6.2e-23	50.5
WP_000766109.1\|2811339_2812557_-\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	5.9e-162	71.6
WP_096037931.1\|2812571_2813171_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	2.1e-88	80.5
WP_000923134.1\|2813163_2814390_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	3.7e-204	83.3
WP_096037932.1\|2814537_2816295_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	99.1
WP_001333563.1\|2816294_2816777_-\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	8.7e-85	98.1
WP_001135104.1\|2816924_2817275_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	8.0e-64	96.6
WP_085947917.1\|2817719_2818993_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_000738421.1\|2819136_2819430_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	5.9e-44	90.7
WP_075202333.1\|2819520_2819703_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	2.2e-17	77.0
WP_000992097.1\|2819919_2820453_-	lysozyme	Q08J98	Stx2-converting_phage	1.5e-98	93.2
WP_000193264.1\|2820516_2820867_-	YdfR family protein	K7PGU6	Enterobacteria_phage	1.4e-36	94.0
WP_000372595.1\|2820871_2821087_-\|holin	holin	A0A2R2Z340	Escherichia_phage	3.4e-33	98.6
WP_000874243.1\|2821394_2821583_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	7.2e-27	95.2
WP_001333560.1\|2821843_2822179_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.4e-44	74.8
WP_001333559.1\|2822249_2822462_+	hypothetical protein	NA	NA	NA	NA
WP_106104550.1\|2822950_2823037_-	DUF3927 family protein	NA	NA	NA	NA
WP_000762879.1\|2823431_2824253_-	antitermination protein	K7P7B9	Enterobacteria_phage	5.1e-77	58.2
WP_096037933.1\|2824249_2824630_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	5.0e-35	62.7
WP_001221526.1\|2824630_2825689_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.5e-89	48.0
WP_032155008.1\|2825690_2825969_-	hypothetical protein	A0A077KB22	Edwardsiella_phage	6.1e-06	37.1
WP_001013636.1\|2826136_2826349_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.9e-26	96.9
WP_001224662.1\|2827383_2827566_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
WP_061349403.1\|2827659_2828016_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	8.8e-58	98.3
WP_001151150.1\|2828073_2828496_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.6e-64	90.6
WP_001262390.1\|2828536_2829607_-	hypothetical protein	A0A088CD36	Shigella_phage	2.6e-52	56.6
WP_000693853.1\|2829678_2830104_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001072337.1\|2830100_2830355_-	hypothetical protein	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
WP_000233320.1\|2830434_2830854_+	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
WP_139914699.1\|2831290_2831491_-	hypothetical protein	NA	NA	NA	NA
WP_001171946.1\|2831583_2831802_+	hypothetical protein	NA	NA	NA	NA
WP_001331716.1\|2831805_2831970_-	hypothetical protein	NA	NA	NA	NA
WP_000854564.1\|2832370_2832559_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001612869.1\|2832555_2832747_+	DUF1482 family protein	NA	NA	NA	NA
WP_096037935.1\|2832840_2835312_+	exonuclease	K7PLW7	Enterobacteria_phage	8.5e-59	60.3
2832947:2832963	attL	NA	NA	NA	NA
WP_000003742.1\|2835373_2835643_+	excisionase	NA	NA	NA	NA
WP_000074983.1\|2835611_2836730_+\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	7.7e-84	44.2
2847676:2847692	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3479576 : 3482134

Stx_converting_phage(66.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001741315.1\|3479576_3479945_+	DUF2528 family protein	A0A1I9LJN3	Stx_converting_phage	8.5e-64	97.5
WP_001198861.1\|3480017_3480182_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_001741311.1\|3480150_3480294_+	host cell division inhibitory peptide Kil	A0A1I9LJN2	Stx_converting_phage	5.1e-17	97.9
WP_000995439.1\|3480369_3480666_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_000100847.1\|3480671_3481457_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_023281837.1\|3481453_3482134_+	YqaJ viral recombinase family protein	B6DZ61	Enterobacteria_phage	5.1e-131	98.2

DBSCAN-SWA_12

3701918 : 3773674

Shigella_phage(58.62%)

head,protease,tail,portal,capsid,terminase,transposase,holin,integrase,plate

attL 3729630:3729689|attR 3769759:3769818

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096037971.1\|3701918_3703081_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-51	40.2
WP_122997413.1\|3703223_3703298_-	hypothetical protein	NA	NA	NA	NA
WP_000131044.1\|3703603_3705637_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|3705765_3706353_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_001514956.1\|3706366_3707839_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_096037972.1\|3707852_3709523_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	6.1e-61	31.2
WP_001209100.1\|3709735_3710404_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|3710646_3711342_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023927.1\|3711334_3712762_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102100.1\|3712772_3713492_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000339594.1\|3714018_3714873_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001046307.1\|3715098_3716424_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
WP_000474084.1\|3716532_3716769_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001299021.1\|3716780_3717374_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_000621009.1\|3717964_3718816_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024250650.1\|3718955_3723212_-	intimin-like adhesin FdeC	NA	NA	NA	NA
WP_000662258.1\|3724328_3724430_+	hypothetical protein	NA	NA	NA	NA
WP_000803998.1\|3724793_3725057_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000866436.1\|3725056_3725197_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_032338128.1\|3725231_3725423_-	hypothetical protein	NA	NA	NA	NA
WP_085947917.1\|3725407_3726681_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_061091801.1\|3727027_3728650_+	hypothetical protein	NA	NA	NA	NA
WP_001384291.1\|3728736_3729333_-	hypothetical protein	A0A1B0VBK8	Salmonella_phage	5.0e-98	87.9
3729630:3729689	attL	NA	NA	NA	NA
WP_000749408.1\|3730024_3730456_+	hypothetical protein	NA	NA	NA	NA
WP_085949416.1\|3730832_3731995_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.0e-50	40.2
WP_023147381.1\|3732077_3732410_-	protein FlxA	NA	NA	NA	NA
WP_032193087.1\|3733265_3735155_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_023147383.1\|3735405_3735780_+	hypothetical protein	A0A0F7LBW5	Escherichia_phage	2.8e-14	49.4
WP_001515122.1\|3735779_3736223_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.5e-46	62.4
WP_001515121.1\|3736194_3736605_-\|tail	tail assembly chaperone	U5P0S4	Shigella_phage	2.3e-25	81.6
WP_039000333.1\|3736604_3737531_-	hypothetical protein	U5P0I1	Shigella_phage	9.3e-51	83.1
WP_000383536.1\|3737534_3738119_-	YmfQ family protein	O22003	Shigella_phage	7.0e-113	99.0
WP_023147736.1\|3738109_3739168_-\|plate	baseplate J/gp47 family protein	Q8SBG4	Shigella_phage	8.1e-200	98.9
WP_016244980.1\|3739154_3739580_-\|tail	phage tail protein	U5P0R9	Shigella_phage	2.0e-80	99.3
WP_001259084.1\|3739579_3740128_-\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	5.1e-97	98.9
WP_000999511.1\|3740127_3741207_-\|plate	baseplate protein	U5P0H6	Shigella_phage	2.6e-206	99.7
WP_032193238.1\|3741203_3742532_-	DNA circularization protein	Q8SBG8	Shigella_phage	2.5e-246	98.6
WP_016244982.1\|3742592_3744428_-\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	2.9e-306	99.3
WP_000661054.1\|3744569_3744839_-\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	3.5e-43	100.0
WP_000090998.1\|3744838_3745195_-	hypothetical protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_016244983.1\|3745194_3746691_-\|tail	phage tail sheath protein	M1FN90	Enterobacteria_phage	5.4e-274	99.4
WP_000497751.1\|3746674_3746845_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_016244984.1\|3746853_3747414_-	hypothetical protein	Q8SBH4	Shigella_phage	3.0e-105	98.9
WP_000213503.1\|3747410_3747917_-	hypothetical protein	M1FPE2	Enterobacteria_phage	3.2e-90	99.4
WP_023147732.1\|3747891_3748302_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	2.1e-71	96.3
WP_000927711.1\|3748298_3748622_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	1.1e-56	99.1
WP_000601360.1\|3748624_3748825_-	hypothetical protein	S5FNU1	Shigella_phage	3.8e-26	97.0
WP_000257519.1\|3748874_3750080_-\|capsid	phage major capsid protein	A0A1B5FPI9	Escherichia_phage	1.8e-224	100.0
WP_016244986.1\|3750094_3750745_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	1.6e-118	99.1
WP_023147731.1\|3750722_3751964_-\|portal	phage portal protein	U5P411	Shigella_phage	1.3e-241	99.5
WP_000605606.1\|3751963_3752146_-	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-25	100.0
WP_123010488.1\|3752157_3753654_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	2.0e-300	99.8
WP_000929173.1\|3753887_3754382_-\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	1.3e-88	100.0
WP_021519684.1\|3754507_3754858_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	2.3e-63	95.7
WP_021519683.1\|3754915_3755422_-	hypothetical protein	NA	NA	NA	NA
WP_032193237.1\|3755759_3756152_-	DUF2570 domain-containing protein	U5P0U9	Shigella_phage	1.3e-49	82.9
WP_016236818.1\|3756135_3756612_-	glycoside hydrolase family protein	Q8SBE0	Shigella_phage	1.5e-84	94.3
WP_001120501.1\|3756615_3756951_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.0e-59	99.1
WP_001449601.1\|3757087_3757381_-	site-specific DNA-methyltransferase	Q8SBE2	Shigella_phage	1.5e-42	90.7
WP_001310393.1\|3757659_3757893_-	hypothetical protein	NA	NA	NA	NA
WP_000484663.1\|3758036_3758576_-	hypothetical protein	NA	NA	NA	NA
WP_021519680.1\|3758791_3759544_-	antitermination protein	Q8SBE4	Shigella_phage	5.8e-136	98.4
WP_001360050.1\|3759557_3760547_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-195	100.0
WP_001061403.1\|3760554_3761352_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	2.0e-150	99.6
WP_000767095.1\|3761371_3761761_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.6e-68	99.2
WP_021549921.1\|3761757_3762084_-	LexA repressor	A0A0N7KZF7	Stx2-converting_phage	2.7e-53	99.1
WP_015364417.1\|3762080_3762734_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	5.6e-127	99.1
WP_072176118.1\|3762733_3763228_-	PerC family transcriptional regulator	U5P0U0	Shigella_phage	4.3e-87	97.6
WP_000104954.1\|3763224_3764166_-	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	4.3e-144	99.7
WP_001250269.1\|3764155_3764335_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_001434539.1\|3764510_3765062_-	hypothetical protein	S5FXP0	Shigella_phage	7.6e-101	98.9
WP_000205494.1\|3765099_3765300_-	cell division protein	NA	NA	NA	NA
WP_000450735.1\|3765397_3766024_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	5.5e-47	48.8
WP_000917896.1\|3766209_3766506_+	hypothetical protein	Q8SBF7	Shigella_phage	1.2e-52	100.0
WP_000008202.1\|3767182_3767719_+	5'-deoxynucleotidase	U5P0T3	Shigella_phage	9.7e-101	99.4
WP_001242749.1\|3767709_3768072_+	phage protein	U5P092	Shigella_phage	2.1e-67	100.0
WP_001519505.1\|3768071_3768368_+	hypothetical protein	U5P0J0	Shigella_phage	6.8e-48	97.0
WP_077873866.1\|3768283_3768718_+	helix-turn-helix domain-containing protein	U5P4J3	Shigella_phage	6.4e-79	100.0
WP_000051893.1\|3768594_3769758_+\|integrase	site-specific integrase	U5P434	Shigella_phage	5.3e-229	99.7
WP_000893278.1\|3769962_3771216_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
3769759:3769818	attR	NA	NA	NA	NA
WP_001285288.1\|3771227_3772331_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000749881.1\|3772618_3773674_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	7.7e-118	60.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP023381

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 90873

100

Escherichia_phage(62.89%)

portal,terminase,integrase,head,tail,holin

attL 973:991|attR 91040:91058

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001076427.1\|0_861_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	4.7e-158	100.0
973:991	attL	NA	NA	NA	NA
WP_001285362.1\|1418_2615_+	ParA family protein	A0A077SL49	Escherichia_phage	1.6e-225	100.0
WP_000038866.1\|2631_3633_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.7e-178	100.0
WP_059338140.1\|3858_5565_+	hypothetical protein	Q1MVJ5	Enterobacteria_phage	6.3e-311	94.2
WP_096038030.1\|5625_7215_+	hypothetical protein	Q71TB2	Escherichia_phage	2.4e-301	98.7
WP_000041757.1\|7224_8040_+	hypothetical protein	A0A1B0V835	Salmonella_phage	2.6e-113	99.3
WP_000035301.1\|8075_8657_+	hypothetical protein	Q1MVJ8	Enterobacteria_phage	7.3e-102	97.4
WP_000509939.1\|8668_9178_+	hypothetical protein	Q1MVJ9	Enterobacteria_phage	1.3e-91	100.0
WP_001313475.1\|9294_9450_-	type I toxin-antitoxin system toxin HokD	A0A1I9LJU7	Stx_converting_phage	1.0e-15	92.2
WP_001426344.1\|9631_9877_-	hypothetical protein	A0A1B0VDM5	Salmonella_phage	3.5e-13	45.0
WP_033560572.1\|9927_10773_-	hypothetical protein	Q1MVK3	Enterobacteria_phage	4.2e-151	98.6
WP_001187875.1\|10802_11603_-	protein kilA	Q1MVK4	Enterobacteria_phage	1.9e-148	100.0
WP_096038031.1\|11767_12805_-	phage antirepressor Ant	Q71TN2	Escherichia_phage	3.7e-173	93.1
WP_000245712.1\|12801_13023_-	host cell division inhibitor Icd-like protein	A0A077SLM6	Escherichia_phage	1.3e-38	100.0
WP_063120244.1\|13423_14098_+	hypothetical protein	Q71TC4	Escherichia_phage	4.0e-19	92.2
WP_000846124.1\|14356_14626_+	hypothetical protein	NA	NA	NA	NA
WP_000188924.1\|14684_15251_+	hypothetical protein	Q1MVL0	Enterobacteria_phage	6.6e-100	100.0
WP_000523978.1\|15261_15873_+	hypothetical protein	A0A077SLH8	Escherichia_phage	5.8e-110	100.0
WP_063120243.1\|15887_16769_+	hypothetical protein	A0A1B0VBL3	Salmonella_phage	8.3e-174	99.3
WP_096038032.1\|16850_20642_+	lytic transglycosylase domain-containing protein	Q1MVL3	Enterobacteria_phage	0.0e+00	86.1
WP_089581147.1\|20641_20998_+	hypothetical protein	Q71TP1	Escherichia_phage	1.1e-60	99.2
WP_029487598.1\|20994_22428_+	bleomycin hydrolase	Q71TP2	Escherichia_phage	3.4e-270	99.4
WP_001561131.1\|22427_23264_+	hypothetical protein	A0A077SLH5	Escherichia_phage	1.5e-153	99.6
WP_029487597.1\|23342_23777_+	hypothetical protein	Q71TD4	Escherichia_phage	3.7e-74	98.6
WP_096038033.1\|23788_26860_+	hypothetical protein	Q71TP5	Escherichia_phage	3.8e-242	73.7
WP_063078302.1\|26859_27270_+\|tail	phage tail protein	Q9MCR5	Enterobacteria_phage	5.6e-24	81.6
WP_000332810.1\|27687_27969_+	hypothetical protein	Q71TD9	Escherichia_phage	1.8e-45	98.9
WP_000887652.1\|28036_28366_+\|holin	holin	Q37876	Escherichia_phage	1.3e-52	100.0
WP_000580776.1\|28362_28806_+	hypothetical protein	A0A077SK09	Escherichia_phage	1.3e-82	100.0
WP_000164724.1\|28792_29395_+	hypothetical protein	Q1MVM6	Enterobacteria_phage	1.6e-99	99.5
WP_096038034.1\|29396_31316_+	hypothetical protein	A0A1B0V7H1	Salmonella_phage	0.0e+00	95.9
WP_000175490.1\|31312_31678_+	hypothetical protein	A0A1B0V846	Salmonella_phage	2.1e-46	97.5
WP_096038035.1\|31690_34678_+	hypothetical protein	A0A1B0VFX4	Salmonella_phage	0.0e+00	99.1
WP_001376906.1\|34667_34985_+	hypothetical protein	Q1MVN0	Enterobacteria_phage	7.6e-45	88.6
WP_032185981.1\|35014_35803_-	hypothetical protein	Q71TF1	Escherichia_phage	1.5e-142	96.6
WP_096038051.1\|35809_36487_-	DUF2829 domain-containing protein	A0A1B0VBT1	Salmonella_phage	3.2e-125	97.8
WP_000068865.1\|36684_37173_-	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	5.0e-88	100.0
WP_001345478.1\|37342_37900_+	lysozyme	Q71TF3	Escherichia_phage	4.2e-107	100.0
WP_096038037.1\|38191_39211_-\|head	head processing protein	Q71TR6	Escherichia_phage	1.2e-184	99.7
WP_096038038.1\|39203_40913_-\|portal	phage portal protein	Q71TR7	Escherichia_phage	0.0e+00	99.3
WP_096038039.1\|40989_47757_+	N-6 DNA methylase	Q1MVN7	Enterobacteria_phage	0.0e+00	98.3
WP_000224043.1\|47790_48231_+	hypothetical protein	A0A077SLF0	Escherichia_phage	1.7e-79	100.0
WP_000747846.1\|48227_48476_+	hypothetical protein	Q71TG0	Escherichia_phage	1.8e-41	100.0
WP_024245513.1\|48534_49044_-	hypothetical protein	NA	NA	NA	NA
WP_096038040.1\|49043_50084_-	hypothetical protein	NA	NA	NA	NA
WP_096038041.1\|50174_50816_-	maturation control protein	A0A077SK30	Escherichia_phage	6.5e-112	96.7
WP_096038042.1\|51006_51567_-	Ref family protein	Q5QBN4	Enterobacteria_phage	1.0e-97	95.7
WP_023156636.1\|51812_52124_-	hypothetical protein	A0A077SK03	Escherichia_phage	3.9e-46	98.1
WP_096038043.1\|52174_53206_-\|integrase	tyrosine-type recombinase/integrase	A0A077SLE7	Escherichia_phage	1.9e-193	99.1
WP_000542332.1\|53213_53435_-	hypothetical protein	A0A077SLI9	Escherichia_phage	3.4e-36	100.0
WP_000874154.1\|54038_54248_+	hypothetical protein	Q5XLQ8	Enterobacteria_phage	4.8e-32	100.0
WP_000611656.1\|54358_55210_+	hypothetical protein	A0A077SLM8	Escherichia_phage	6.1e-158	99.6
WP_096038044.1\|55234_56719_-\|terminase	terminase	Q5QBP2	Enterobacteria_phage	9.6e-292	99.6
WP_096038045.1\|56718_57912_-\|terminase	terminase	Q5QBP3	Enterobacteria_phage	2.8e-209	99.0
WP_001312282.1\|57998_58451_-	late promoter-activating protein (Gp10)	Q71T63	Escherichia_phage	6.7e-79	99.3
WP_000648827.1\|58539_59583_-	DUF968 domain-containing protein	A0A1B0VBU2	Salmonella_phage	1.0e-207	100.0
WP_000113019.1\|59610_59790_-	hypothetical protein	Q71TH5	Escherichia_phage	2.7e-23	98.3
WP_001216045.1\|59794_60175_-	type II toxin-antitoxin system death-on-curing family toxin	Q71T66	Escherichia_phage	1.9e-63	100.0
WP_001190712.1\|60174_60396_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
WP_000506726.1\|60468_60858_-	DNA repair protein	Q1MVE7	Enterobacteria_phage	1.4e-69	99.2
WP_001377386.1\|60981_61233_-	DNA polymerase III subunit theta	Q71T70	Escherichia_phage	4.6e-37	94.0
WP_001261544.1\|61894_62257_-	hypothetical protein	Q71TI4	Escherichia_phage	2.2e-56	100.0
WP_000057449.1\|62253_63186_-	hypothetical protein	A0A1B0VDS6	Salmonella_phage	1.4e-179	98.4
WP_000988658.1\|63167_63542_-	hypothetical protein	A0A077SL57	Escherichia_phage	3.2e-66	96.0
WP_001677496.1\|63548_63842_-	hypothetical protein	A0A077SK23	Escherichia_phage	9.1e-45	91.8
WP_000516537.1\|64020_64254_-	hypothetical protein	A0A1B0V7L5	Salmonella_phage	1.6e-36	97.4
WP_023153863.1\|64336_65224_-	DUF551 domain-containing protein	A0A077SK54	Escherichia_phage	1.8e-80	59.3
WP_000224220.1\|65234_65498_-	hypothetical protein	A0A2P0P958	Salmonella_phage	6.7e-31	73.6
WP_033550033.1\|65499_66057_-	ead/Ea22-like family protein	A0A0N7BYR8	Escherichia_phage	5.1e-36	62.8
WP_000118152.1\|66058_66358_-	hypothetical protein	Q716F3	Shigella_phage	1.5e-58	100.0
WP_023154014.1\|66354_67080_-	ead/Ea22-like family protein	A0A0U2QW67	Escherichia_phage	7.5e-48	49.8
WP_023352820.1\|67076_67316_-	hypothetical protein	S5MQM0	Escherichia_phage	1.3e-36	97.5
WP_000158004.1\|67308_67512_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	5.2e-31	95.5
WP_023153717.1\|67595_68324_-	hypothetical protein	Q71T76	Escherichia_phage	1.7e-140	99.1
WP_000021768.1\|68518_69025_-	hypothetical protein	A0A1B0VAK0	Salmonella_phage	1.8e-93	99.4
WP_055388165.1\|69097_70360_-	hypothetical protein	A0A1B0V7L1	Salmonella_phage	6.0e-234	99.5
WP_000684868.1\|70661_71363_-	hypothetical protein	Q71TJ0	Escherichia_phage	2.1e-143	99.6
WP_096038046.1\|71359_72037_-	serine/threonine protein phosphatase	Q71TJ1	Escherichia_phage	3.0e-131	96.9
WP_000484110.1\|72033_72660_-	norphogenetic protein	Q71T82	Escherichia_phage	6.1e-123	100.0
WP_012817939.1\|72557_73220_-	hypothetical protein	Q71T83	Escherichia_phage	4.5e-124	100.0
WP_000096174.1\|73161_73317_-	hypothetical protein	Q71TJ4	Escherichia_phage	7.0e-20	100.0
WP_096038047.1\|73383_73962_-	norphogenetic protein	Q71T85	Escherichia_phage	1.7e-106	99.0
WP_000840931.1\|73964_74210_-	hypothetical protein	Q71T86	Escherichia_phage	5.7e-40	100.0
WP_000235786.1\|74356_74734_+	hypothetical protein	Q38620	Escherichia_phage	2.2e-67	100.0
WP_001141908.1\|74743_75961_+	hypothetical protein	A0A077SL53	Escherichia_phage	1.1e-224	100.0
WP_000896806.1\|75964_76693_+	hypothetical protein	Q71TJ9	Escherichia_phage	4.2e-139	100.0
WP_000602711.1\|76679_77465_+	hypothetical protein	A0A1B0V7N6	Salmonella_phage	2.7e-144	99.6
WP_000212018.1\|77466_78483_+	hypothetical protein	A0A077SLQ1	Escherichia_phage	3.5e-192	100.0
WP_000535203.1\|78475_79108_+	hypothetical protein	A0A077SK50	Escherichia_phage	6.9e-90	100.0
WP_096038048.1\|79154_80153_-	hypothetical protein	Q71TK3	Escherichia_phage	7.6e-192	97.3
WP_001276603.1\|80152_81517_-	replicative DNA helicase	O80281	Escherichia_phage	1.6e-253	99.8
WP_000751808.1\|81906_82734_-	hypothetical protein	A0A077SLJ6	Escherichia_phage	1.6e-131	100.0
WP_096038049.1\|84708_86973_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A077SL51	Escherichia_phage	0.0e+00	68.1
WP_000472529.1\|86969_87875_-	recombination-associated protein RdgC	A0A077SK17	Escherichia_phage	1.6e-159	99.7
WP_001177862.1\|87867_88152_-	hypothetical protein	Q71TA2	Escherichia_phage	2.5e-47	97.9
WP_001369296.1\|88425_88605_+	hypothetical protein	A0A1B0V758	Salmonella_phage	6.8e-27	98.3
WP_060588823.1\|88613_89402_+	hypothetical protein	A0A077SK48	Escherichia_phage	3.4e-118	99.2
WP_096038050.1\|89441_89864_+	ppfA	A0A1B0VCB0	Salmonella_phage	1.1e-43	83.6
WP_001281923.1\|90041_90401_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	4.6e-38	69.1
WP_000458377.1\|90471_90873_+	hypothetical protein	Q71TL7	Escherichia_phage	5.5e-32	54.0
91040:91058	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage