CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP023384	Escherichia coli strain 1223 plasmid p147, complete sequence	0 crisprs	NA	0	1
NZ_CP023383	Escherichia coli strain 1223 chromosome, complete genome	6 crisprs	RT,DEDDh,DinG,cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK	11	9
NZ_CP023385	Escherichia coli strain 1223 plasmid p87, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5199 : 27860

Dickeya_phage(33.33%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021535332.1\|5199_6147_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_001332050.1\|6250_6640_+\|protease	outer membrane protease	NA	NA	NA	NA
WP_001312823.1\|7419_7578_-\|transposase	transposase	NA	NA	NA	NA
WP_032148326.1\|9245_10433_+	efflux RND transporter periplasmic adaptor subunit	A0A140XAI1	Dickeya_phage	1.0e-09	55.7
WP_001610972.1\|10429_12370_+	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	1.8e-35	39.0
WP_032148327.1\|12373_13744_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_001610978.1\|16140_16917_+	hypothetical protein	NA	NA	NA	NA
WP_001610979.1\|16918_19183_+	hypothetical protein	NA	NA	NA	NA
WP_071595360.1\|19418_19550_+\|transposase	transposase	NA	NA	NA	NA
WP_001610984.1\|21523_21895_-	hypothetical protein	NA	NA	NA	NA
WP_001610303.1\|21937_22405_-	hypothetical protein	NA	NA	NA	NA
WP_001610985.1\|22404_22674_-	hypothetical protein	NA	NA	NA	NA
WP_001610305.1\|22905_24303_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000450494.1\|24938_26132_-	hypothetical protein	NA	NA	NA	NA
WP_096040815.1\|26586_27860_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-172	96.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023383

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023383_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023383_1

577933-578080

Orphan

Consensus_repeat	Method
CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023383_1

>merge|NZ_CP023383|1|577933-578080|CRISPRCasFinder
CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>NZ_CP023383|1|1|577933-578080|CRISPRCasFinder
CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCG
CGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023383.1\|WP_000416382.1\|574464_577320_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP023383.1\|WP_000786399.1\|577319_577763_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP023383.1\|WP_001326836.1\|568670_569123_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NZ_CP023383.1\|WP_000002953.1\|572062_572479_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP023383.1\|WP_000500689.1\|567148_567862_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NZ_CP023383.1\|WP_001446910.1\|586640_587015_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023383.1\|WP_000584107.1\|579894_580995_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP023383.1\|WP_000772679.1\|585332_586598_+\|integrase-arm-type-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP023383.1\|WP_001352285.1\|583869_584889_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP023383.1\|WP_001059412.1\|572524_573028_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023383.1\|WP_001254928.1\|590810_591962_+\|IS30-like-element-IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP023383.1\|WP_000079655.1\|573212_574409_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP023383.1\|WP_001352287.1\|589315_590218_-\|DUF1837-domain-containing-protein	unknown	unknown	gnl\|CDD\|378078
NZ_CP023383.1\|WP_001545798.1\|580994_582077_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP023383.1\|WP_000349548.1\|592910_593114_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225973
NZ_CP023383.1\|WP_000397144.1\|578116_579628_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP023383.1\|WP_000012907.1\|570896_571901_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP023383.1\|WP_001352286.1\|587017_589198_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350679
NZ_CP023383.1\|WP_000036448.1\|569245_570841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023383.1\|WP_000256681.1\|567932_568526_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NZ_CP023383.1\|WP_000416382.1\|574464_577320_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP023383.1\|WP_000786399.1\|577319_577763_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP023383.1\|WP_001326836.1\|568670_569123_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.64234e-69
NZ_CP023383.1\|WP_000002953.1\|572062_572479_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69
NZ_CP023383.1\|WP_000500689.1\|567148_567862_-\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	1.67397e-148
NZ_CP023383.1\|WP_000584107.1\|579894_580995_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP023383.1\|WP_000772679.1\|585332_586598_+\|integrase-arm-type-DNA-binding-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	2.15714e-82
NZ_CP023383.1\|WP_001352285.1\|583869_584889_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.55381e-168
NZ_CP023383.1\|WP_001059412.1\|572524_573028_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.73712e-19
NZ_CP023383.1\|WP_000079655.1\|573212_574409_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	4.28094e-150
NZ_CP023383.1\|WP_001352287.1\|589315_590218_-\|DUF1837-domain-containing-protein	gnl\|CDD\|378078	pfam08878, DUF1837, Domain of unknown function (DUF1837). This family of proteins are functionally uncharacterized.	1.62458e-34
NZ_CP023383.1\|WP_001545798.1\|580994_582077_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP023383.1\|WP_000349548.1\|592910_593114_-\|hypothetical-protein	gnl\|CDD\|225973	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms].	3.6988e-11
NZ_CP023383.1\|WP_000397144.1\|578116_579628_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP023383.1\|WP_000012907.1\|570896_571901_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP023383.1\|WP_001352286.1\|587017_589198_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|350679	cd17921, DEXHc_Ski2, DEXH-box helicase domain of DEAD-like helicase Ski2 family proteins. Ski2-like RNA helicases play an important role in RNA degradation, processing, and splicing pathways. They belong to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.48315e-45
NZ_CP023383.1\|WP_001254928.1\|590810_591962_+\|IS30-like-element-IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	2.87022e-136
NZ_CP023383.1\|WP_000256681.1\|567932_568526_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.07846e-09

>NZ_CP023383.1|WP_000786399.1|577319_577763_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP023383.1|WP_000416382.1|574464_577320_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP023383.1|WP_000079655.1|573212_574409_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSLKGFWWVTFFLPILMAIGMGAVFFISTKMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLARISRGIMPSLPFL
>NZ_CP023383.1|WP_001059412.1|572524_573028_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTQQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEFDGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
>NZ_CP023383.1|WP_000002953.1|572062_572479_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>NZ_CP023383.1|WP_000012907.1|570896_571901_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NZ_CP023383.1|WP_000036448.1|569245_570841_+|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARNAEGQDNTRNILDPKTFLEFLVKIFTLGYVDFSNRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADLSKVEIEITLSTITTMGTRQGHTAIIFQQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQREANKEVALLLNNHQLNWKDAIDYNELLEKPLASTLEKIKKEHLLLMPHVCDDTIPYLLGEGGILEEINGLKTLHDTKIDSGTEGNDEINNIKINLSNILIDSLDDAKINLEKVIDSMLETFFKLPYINDVKILEWCFNQSMQYSDDTTKIKHARSVIDHIDFNCDQSKIAETLFFNLNKEPYKNSPELQELIWEKLVVYVNDFNLSNQEKSRLILRLFDDVKLVFDKVPLSILVNDIFLKDFFMKQPDFAKWYFYQLLKSYEGEQMYLNELGYVYGDEEKTKEIVNKLPGYVVKIFEEKIDNELKIRTRMMEILRDEQINIYEYINEKQLEKLNPQGNLRIAIEKFGWNNKPITA
>NZ_CP023383.1|WP_001326836.1|568670_569123_+|YhcH/YjgK/YiaL-family-protein
MIIGNIHNLQPWLPQELRQAIEHIKAHVTPETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLRGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP023383.1|WP_000256681.1|567932_568526_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKVGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE
>NZ_CP023383.1|WP_000500689.1|567148_567862_-|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAEHLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNSDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>NZ_CP023383.1|WP_000397144.1|578116_579628_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP023383.1|WP_000584107.1|579894_580995_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP023383.1|WP_001545798.1|580994_582077_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNSKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP023383.1|WP_001352285.1|583869_584889_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIRSYAAKEAGGELEVYEYDPGELRPQDIEVQVDYCGICHSDLSMIDNEWGFSQYPLIAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>NZ_CP023383.1|WP_000772679.1|585332_586598_+|integrase-arm-type-DNA-binding-domain-containing-protein
MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKPLVQGIDPKAEKKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRKAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGAMGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMIQWWADYLDELNNNYITPFDFAKIQKNY
>NZ_CP023383.1|WP_001446910.1|586640_587015_-|hypothetical-protein
MDRAVREVFDFVEDNLRFKYVQLGKAYIDLLRQALIENNQEKKSEEIYDFPLSLELGVSSIAGQVFIELGLSRITASYLENIIPNSNPSVSAAKEWLRNNDYDSLKLPLAIYTELEDKGLLKNN
>NZ_CP023383.1|WP_001352286.1|587017_589198_-|DEAD/DEAH-box-helicase
MNTLAAEIISQIKKHLEFKNDLSFLFAHSFLQNHKRTSFATKQSKIGDENIVIYKRLIESAYLFSQSESDEDKNLAQSIAYHLNVVTGDDYLKQMSENLLRVLGNFPGATYLQQENGFIPESFYAFLKRSFIENENKIKISNKEITLTNFQKRVWESLHSNVPQAISAPTSAGKSFLVVEMLANGIISGELNSAIYIAPTRALVNEITQKFIIKTLPYQNEVRVTSIPTINNEYNKQIFVLTQERLQVLLDNFEEKIDLVVIDEAQSISDEIRGMILQDCLDKISTQNPNAKYVFLAPGAEGFDDLADIIGIDAIHIEKTNLSPVVQNKIIVKVDPSKENNLQLSLLDNSDILPIGEIESTRGFANENTRLAAVALELGKNEGSLVYGTGAENAEDVAKQISSGLPLLEDDSELQELSKFIKKHVHEDYSLANLVLRGVGYHYGKMPSLLRETLEKNFTNNKLKFLVCTTTLFQGVNLPAKNVFIDTPTRGNRGEKLDPASLWNFAGRAGRLGYAFSGNVYLIDYDDWVTKPLDSKIDFKITSSLKKVINEDFDTVISRLDKNNHSGVTPYSNIDAAAGLLISRAAKGDLHNFLKRSFRTLSDKSKLETIDNATYISLESLKIPHEVLTLNWTVDPFGQERLYNRFIQKIKEGKVDELIPRHPSGDVYKNYVGVFSRINKYILNHNTSKFSNYLTSIALNWMRGKSLPEIISLSINKKKEKNPLGL
>NZ_CP023383.1|WP_001352287.1|589315_590218_-|DUF1837-domain-containing-protein
MNAEDTNSLHKIYNPVYGLSNIVLLAKECQSTDPVKVNLLCLGFKEDLPKDKELAETLFLELVHYCIPHPVLVKRKELARSEGKDEARLYSELAREARSLFMKYKLESAVKIKNGEPPEKFEQRVKNANLRYGEVGELISYCIAIHFLKASQLVSKMALKTSSEMPVFGLDGIHATIDSKGTLTVFYLESKMTREFDSGSEQFSKSVSGFESDRNSRRNEYRILQDLSNLESLEGEERKKAIQYFDPYSNESSNVRERFVRIIAYNEESYKSKIAIDDESPLSIHLDHFKKITSALLKKK
>NZ_CP023383.1|WP_001254928.1|590810_591962_+|IS30-like-element-IS30-family-transposase
MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNELIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD
>NZ_CP023383.1|WP_000349548.1|592910_593114_-|hypothetical-protein
MDHFSSVVDSLDESMRVQVSEAVNGSGIVGRLFWDFQGKSISLPQVKAYYPQDEFVEWHRREVFRRG

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Crispr_ID: NZ_CP023383_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023383_2

1115337-1115481

Orphan

Consensus_repeat	Method
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023383_2

>merge|NZ_CP023383|2|1115337-1115481|CRISPRCasFinder
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAA

>NZ_CP023383|2|2|1115337-1115481|CRISPRCasFinder
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	GGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCG
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023383.1\|WP_001298537.1\|1113368_1114280_-\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|225521
NZ_CP023383.1\|WP_001310597.1\|1126775_1128593_+\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NZ_CP023383.1\|WP_000484048.1\|1107963_1109079_+\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
NZ_CP023383.1\|WP_001266503.1\|1129271_1130342_+\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP023383.1\|WP_000158159.1\|1110024_1110483_+\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP023383.1\|WP_000941942.1\|1112437_1112722_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
NZ_CP023383.1\|WP_120795376.1\|1113207_1113291_+\|protein-YkiD	unknown	unknown	unknown
NZ_CP023383.1\|WP_001295331.1\|1109095_1109905_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP023383.1\|WP_001221319.1\|1120010_1121213_-\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
NZ_CP023383.1\|WP_001326926.1\|1115557_1116742_-\|MFS-transporter-AraJ	unknown	unknown	gnl\|CDD\|182234
NZ_CP023383.1\|WP_001142439.1\|1111239_1111431_+\|protein-YaiA	unknown	unknown	gnl\|CDD\|182421
NZ_CP023383.1\|WP_001219309.1\|1114404_1115313_+\|fructokinase	unknown	unknown	gnl\|CDD\|236565
NZ_CP023383.1\|WP_032258306.1\|1111688_1112366_+\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491
NZ_CP023383.1\|WP_000698951.1\|1116867_1120014_-\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330
NZ_CP023383.1\|WP_001295329.1\|1125246_1126620_+\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
NZ_CP023383.1\|WP_000193393.1\|1110665_1111190_+\|shikimate-kinase-AroL	unknown	unknown	gnl\|CDD\|235153
NZ_CP023383.1\|WP_000893623.1\|1122149_1123445_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|182895
NZ_CP023383.1\|WP_000113933.1\|1121402_1122092_+\|phosphate-response-regulator-transcription-factor-PhoB	unknown	unknown	gnl\|CDD\|182277
NZ_CP023383.1\|WP_001009885.1\|1128597_1129179_-\|ACP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182207
NZ_CP023383.1\|WP_000149639.1\|1123851_1125171_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	unknown	unknown	gnl\|CDD\|185331

Protein	Function_ID	Function_description	E-value
NZ_CP023383.1\|WP_001298537.1\|1113368_1114280_-\|recombination-associated-protein-RdgC	gnl\|CDD\|225521	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair].	0
NZ_CP023383.1\|WP_001310597.1\|1126775_1128593_+\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NZ_CP023383.1\|WP_000484048.1\|1107963_1109079_+\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
NZ_CP023383.1\|WP_001266503.1\|1129271_1130342_+\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP023383.1\|WP_000158159.1\|1110024_1110483_+\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	2.50663e-80
NZ_CP023383.1\|WP_000698951.1\|1116867_1120014_-\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
NZ_CP023383.1\|WP_000149639.1\|1123851_1125171_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
NZ_CP023383.1\|WP_001295331.1\|1109095_1109905_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.87564e-128
NZ_CP023383.1\|WP_001221319.1\|1120010_1121213_-\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
NZ_CP023383.1\|WP_001326926.1\|1115557_1116742_-\|MFS-transporter-AraJ	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	0
NZ_CP023383.1\|WP_001142439.1\|1111239_1111431_+\|protein-YaiA	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	5.14477e-31
NZ_CP023383.1\|WP_001219309.1\|1114404_1115313_+\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
NZ_CP023383.1\|WP_032258306.1\|1111688_1112366_+\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	5.58418e-120
NZ_CP023383.1\|WP_000941942.1\|1112437_1112722_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.85948e-64
NZ_CP023383.1\|WP_001295329.1\|1125246_1126620_+\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP023383.1\|WP_000193393.1\|1110665_1111190_+\|shikimate-kinase-AroL	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.43812e-108
NZ_CP023383.1\|WP_000893623.1\|1122149_1123445_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
NZ_CP023383.1\|WP_000113933.1\|1121402_1122092_+\|phosphate-response-regulator-transcription-factor-PhoB	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	5.1688e-159
NZ_CP023383.1\|WP_001009885.1\|1128597_1129179_-\|ACP-phosphodiesterase	gnl\|CDD\|182207	PRK10045, PRK10045, ACP phosphodiesterase.	3.03368e-136

>NZ_CP023383.1|WP_001219309.1|1114404_1115313_+|fructokinase
MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>NZ_CP023383.1|WP_001298537.1|1113368_1114280_-|recombination-associated-protein-RdgC
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR
>NZ_CP023383.1|WP_120795376.1|1113207_1113291_+|protein-YkiD
MTQRPWSKLQRKTHNIAALKIIARRSE
>NZ_CP023383.1|WP_000941942.1|1112437_1112722_+|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL
>NZ_CP023383.1|WP_032258306.1|1111688_1112366_+|AroM-family-protein
MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSHEEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV
>NZ_CP023383.1|WP_001142439.1|1111239_1111431_+|protein-YaiA
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE
>NZ_CP023383.1|WP_000193393.1|1110665_1111190_+|shikimate-kinase-AroL
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC
>NZ_CP023383.1|WP_000158159.1|1110024_1110483_+|YaiI/YqxD-family-protein
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG
>NZ_CP023383.1|WP_001295331.1|1109095_1109905_-|pyrroline-5-carboxylate-reductase
MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS
>NZ_CP023383.1|WP_000484048.1|1107963_1109079_+|diguanylate-cyclase-AdrA
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA
>NZ_CP023383.1|WP_001326926.1|1115557_1116742_-|MFS-transporter-AraJ
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
>NZ_CP023383.1|WP_000698951.1|1116867_1120014_-|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK
>NZ_CP023383.1|WP_001221319.1|1120010_1121213_-|exonuclease-subunit-SbcD
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
>NZ_CP023383.1|WP_000113933.1|1121402_1122092_+|phosphate-response-regulator-transcription-factor-PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>NZ_CP023383.1|WP_000893623.1|1122149_1123445_+|phosphate-regulon-sensor-histidine-kinase-PhoR
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD
>NZ_CP023383.1|WP_000149639.1|1123851_1125171_+|branched-chain-amino-acid-transporter-carrier-protein-BrnQ
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
>NZ_CP023383.1|WP_001295329.1|1125246_1126620_+|proline-specific-permease-ProY
MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
>NZ_CP023383.1|WP_001310597.1|1126775_1128593_+|maltodextrin-glucosidase
MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
>NZ_CP023383.1|WP_001009885.1|1128597_1129179_-|ACP-phosphodiesterase
MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL
>NZ_CP023383.1|WP_001266503.1|1129271_1130342_+|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE

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Crispr_ID: NZ_CP023383_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023383_3

1255560-1255656

Orphan

Consensus_repeat	Method
GCTTGACGCGTCTTATCAGGCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023383_3

>merge|NZ_CP023383|3|1255560-1255656|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAA

>NZ_CP023383|3|3|1255560-1255656|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAA	CCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGAT
GCTTGACGCATCTTATCAGGCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023383.1\|WP_000988364.1\|1263167_1263860_+\|type-1-fimbria-chaperone-FimC	unknown	unknown	gnl\|CDD\|185117
NZ_CP023383.1\|WP_000776555.1\|1262405_1262948_+\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_CP023383.1\|WP_000212247.1\|1257411_1258134_-\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP023383.1\|WP_000401100.1\|1241792_1243247_+\|putative-allantoin-permease	unknown	unknown	gnl\|CDD\|183106
NZ_CP023383.1\|WP_000815571.1\|1255720_1256788_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP023383.1\|WP_001310618.1\|1248216_1249452_-\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP023383.1\|WP_000912385.1\|1258804_1260190_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP023383.1\|WP_000006900.1\|1243306_1244668_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_CP023383.1\|WP_000152519.1\|1253820_1254636_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP023383.1\|WP_000255997.1\|1258136_1258631_-\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734
NZ_CP023383.1\|WP_000855378.1\|1254632_1255526_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP023383.1\|WP_001143542.1\|1260225_1260747_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP023383.1\|WP_001333621.1\|1246047_1247193_+\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
NZ_CP023383.1\|WP_000729160.1\|1261068_1261935_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP023383.1\|WP_001302767.1\|1244724_1246026_+\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP023383.1\|WP_000495367.1\|1252550_1253810_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP023383.1\|WP_000190288.1\|1260854_1261067_-\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP023383.1\|WP_000540997.1\|1247420_1248206_-\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
NZ_CP023383.1\|WP_001295318.1\|1256784_1257294_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP023383.1\|WP_000703900.1\|1249473_1250523_-\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985

Protein	Function_ID	Function_description	E-value
NZ_CP023383.1\|WP_000988364.1\|1263167_1263860_+\|type-1-fimbria-chaperone-FimC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
NZ_CP023383.1\|WP_000776555.1\|1262405_1262948_+\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
NZ_CP023383.1\|WP_000212247.1\|1257411_1258134_-\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.41122e-165
NZ_CP023383.1\|WP_000401100.1\|1241792_1243247_+\|putative-allantoin-permease	gnl\|CDD\|183106	PRK11375, PRK11375, putative allantoin permease.	0
NZ_CP023383.1\|WP_000815571.1\|1255720_1256788_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.50904e-178
NZ_CP023383.1\|WP_001310618.1\|1248216_1249452_-\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP023383.1\|WP_000912385.1\|1258804_1260190_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP023383.1\|WP_000006900.1\|1243306_1244668_+\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_CP023383.1\|WP_000152519.1\|1253820_1254636_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	3.47659e-37
NZ_CP023383.1\|WP_000255997.1\|1258136_1258631_-\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
NZ_CP023383.1\|WP_000855378.1\|1254632_1255526_+\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP023383.1\|WP_001143542.1\|1260225_1260747_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	4.92496e-31
NZ_CP023383.1\|WP_001333621.1\|1246047_1247193_+\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
NZ_CP023383.1\|WP_000729160.1\|1261068_1261935_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP023383.1\|WP_001302767.1\|1244724_1246026_+\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP023383.1\|WP_000495367.1\|1252550_1253810_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.27269e-131
NZ_CP023383.1\|WP_000190288.1\|1260854_1261067_-\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP023383.1\|WP_000540997.1\|1247420_1248206_-\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	2.39799e-151
NZ_CP023383.1\|WP_001295318.1\|1256784_1257294_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP023383.1\|WP_000703900.1\|1249473_1250523_-\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0

>NZ_CP023383.1|WP_000855378.1|1254632_1255526_+|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP023383.1|WP_000152519.1|1253820_1254636_+|DUF2877-domain-containing-protein
MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP023383.1|WP_000495367.1|1252550_1253810_+|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPSWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP023383.1|WP_000703900.1|1249473_1250523_-|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_CP023383.1|WP_001310618.1|1248216_1249452_-|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP023383.1|WP_000540997.1|1247420_1248206_-|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP023383.1|WP_001333621.1|1246047_1247193_+|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_CP023383.1|WP_001302767.1|1244724_1246026_+|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP023383.1|WP_000006900.1|1243306_1244668_+|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>NZ_CP023383.1|WP_000401100.1|1241792_1243247_+|putative-allantoin-permease
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG
>NZ_CP023383.1|WP_000815571.1|1255720_1256788_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP023383.1|WP_001295318.1|1256784_1257294_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP023383.1|WP_000212247.1|1257411_1258134_-|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP023383.1|WP_000255997.1|1258136_1258631_-|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP023383.1|WP_000912385.1|1258804_1260190_+|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP023383.1|WP_001143542.1|1260225_1260747_-|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_CP023383.1|WP_000190288.1|1260854_1261067_-|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP023383.1|WP_000729160.1|1261068_1261935_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP023383.1|WP_000776555.1|1262405_1262948_+|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP023383.1|WP_000988364.1|1263167_1263860_+|type-1-fimbria-chaperone-FimC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

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Crispr_ID: NZ_CP023383_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023383_4

3056996-3057122

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023383_4

>merge|NZ_CP023383|4|3056996-3057122|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP023383|4|4|3056996-3057122|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023383.1\|WP_001220077.1\|3050211_3053964_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP023383.1\|WP_000301050.1\|3058616_3059267_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP023383.1\|WP_000786545.1\|3035904_3037089_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP023383.1\|WP_000140569.1\|3066698_3067598_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP023383.1\|WP_123039031.1\|3039592_3043987_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP023383.1\|WP_001000379.1\|3065315_3066506_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP023383.1\|WP_000948732.1\|3060810_3062169_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP023383.1\|WP_000332037.1\|3057178_3058309_+\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP023383.1\|WP_000150333.1\|3067610_3067796_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NZ_CP023383.1\|WP_000012305.1\|3044750_3046439_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP023383.1\|WP_024238396.1\|3037162_3037918_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP023383.1\|WP_000779105.1\|3059729_3060806_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP023383.1\|WP_001281225.1\|3046587_3049215_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP023383.1\|WP_000135040.1\|3058308_3058563_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP023383.1\|WP_001209902.1\|3064059_3065319_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP023383.1\|WP_000857257.1\|3062441_3064070_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP023383.1\|WP_001075164.1\|3054659_3056945_+\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP023383.1\|WP_000990765.1\|3049361_3050084_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP023383.1\|WP_001295211.1\|3044130_3044754_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP023383.1\|WP_024238395.1\|3037942_3039592_-\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732

Protein	Function_ID	Function_description	E-value
NZ_CP023383.1\|WP_001220077.1\|3050211_3053964_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP023383.1\|WP_000301050.1\|3058616_3059267_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_CP023383.1\|WP_000786545.1\|3035904_3037089_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP023383.1\|WP_000140569.1\|3066698_3067598_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP023383.1\|WP_123039031.1\|3039592_3043987_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP023383.1\|WP_001000379.1\|3065315_3066506_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP023383.1\|WP_000948732.1\|3060810_3062169_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP023383.1\|WP_000332037.1\|3057178_3058309_+\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP023383.1\|WP_000150333.1\|3067610_3067796_+\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.35852e-30
NZ_CP023383.1\|WP_000012305.1\|3044750_3046439_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP023383.1\|WP_024238396.1\|3037162_3037918_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.80255e-148
NZ_CP023383.1\|WP_000779105.1\|3059729_3060806_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP023383.1\|WP_001281225.1\|3046587_3049215_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP023383.1\|WP_000135040.1\|3058308_3058563_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP023383.1\|WP_001209902.1\|3064059_3065319_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP023383.1\|WP_000857257.1\|3062441_3064070_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP023383.1\|WP_001075164.1\|3054659_3056945_+\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP023383.1\|WP_000990765.1\|3049361_3050084_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.65303e-171
NZ_CP023383.1\|WP_001295211.1\|3044130_3044754_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
NZ_CP023383.1\|WP_024238395.1\|3037942_3039592_-\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.10535e-127

>NZ_CP023383.1|WP_001075164.1|3054659_3056945_+|ribonucleoside-diphosphate-reductase-1-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP023383.1|WP_001220077.1|3050211_3053964_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP023383.1|WP_000990765.1|3049361_3050084_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP023383.1|WP_001281225.1|3046587_3049215_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP023383.1|WP_000012305.1|3044750_3046439_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP023383.1|WP_001295211.1|3044130_3044754_-|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP023383.1|WP_123039031.1|3039592_3043987_-|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILVKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVRVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINPGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKDEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWHEPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP023383.1|WP_024238395.1|3037942_3039592_-|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLIIPDSSATQRVSASPATTGARTMAAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP023383.1|WP_024238396.1|3037162_3037918_-|YfaP-family-protein
MLLVALSPVAHSEGVQEVEIDAPLSGWHPVEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP023383.1|WP_000786545.1|3035904_3037089_+|acetyl-CoA-C-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLTRIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP023383.1|WP_000332037.1|3057178_3058309_+|ribonucleoside-diphosphate-reductase-1-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP023383.1|WP_000135040.1|3058308_3058563_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP023383.1|WP_000301050.1|3058616_3059267_-|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP023383.1|WP_000779105.1|3059729_3060806_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP023383.1|WP_000948732.1|3060810_3062169_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP023383.1|WP_000857257.1|3062441_3064070_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP023383.1|WP_001209902.1|3064059_3065319_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP023383.1|WP_001000379.1|3065315_3066506_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP023383.1|WP_000140569.1|3066698_3067598_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>NZ_CP023383.1|WP_000150333.1|3067610_3067796_+|hypothetical-protein
MTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH

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Crispr_ID: NZ_CP023383_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023383_5

3604975-3605369

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP023383_5

>merge|NZ_CP023383|5|3604975-3605369|CRT,PILER-CR,CRISPRCasFinder
GGGAGTTCTACCGCAGGGGCGGGGAACTCCAAGTGATATCCATCATCGCATCCAGTGCGCCCGGTTTATCCCCGCTGACGCGGGGAACACACATGAATGTCGGTTCAGACCGTGTTTTTACCCGGTTTATCCCCGCTGGCGCGGGGAACACAGTGCTGGACCATTTCAAATTCACAATAGATTCGGTTTATCCCCGCTGGCGCGGGGAACACTGATATCCTGTCCAATACTGACGCGGTTATCGCGGTTTATCCCCGCTGGCGCGGGGAACACTAATACATGGGGCTACTGGATTATTATTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACCGTCCGGATCGGTTTCGAGAATCTCTACGCTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP023383|5|1|3604975-3605369|CRT
GGGAGTTCTACCGCAGGGGCGGGGAACTC	CAAGTGATATCCATCATCGCATCCAGTGCGCC
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACATGAATGTCGGTTCAGACCGTGTTTTTACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGCTGGACCATTTCAAATTCACAATAGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATCCTGTCCAATACTGACGCGGTTATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACATGGGGCTACTGGATTATTATTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTCCGGATCGGTTTCGAGAATCTCTACGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP023383|5|1|3605036-3605369|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACATGAATGTCGGTTCAGACCGTGTTTTTACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGCTGGACCATTTCAAATTCACAATAGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATCCTGTCCAATACTGACGCGGTTATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACATGGGGCTACTGGATTATTATTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTCCGGATCGGTTTCGAGAATCTCTACGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP023383|5|5|3605036-3605369|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACATGAATGTCGGTTCAGACCGTGTTTTTACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGCTGGACCATTTCAAATTCACAATAGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATCCTGTCCAATACTGACGCGGTTATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACATGGGGCTACTGGATTATTATTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTCCGGATCGGTTTCGAGAATCTCTACGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023383.1\|WP_000372108.1\|3601979_3602888_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP023383.1\|WP_000568943.1\|3596813_3597863_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP023383.1\|WP_000490430.1\|3603916_3604954_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP023383.1\|WP_000246138.1\|3598338_3599049_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP023383.1\|WP_049254555.1\|3611324_3614024_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP023383.1\|WP_000029329.1\|3609131_3609668_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP023383.1\|WP_001300563.1\|3614262_3615375_+\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP023383.1\|WP_001173676.1\|3599945_3600551_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP023383.1\|WP_001090386.1\|3600550_3601978_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP023383.1\|WP_000061856.1\|3605465_3605759_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP023383.1\|WP_000144854.1\|3605755_3606679_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP023383.1\|WP_001295182.1\|3596071_3596833_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP023383.1\|WP_000956460.1\|3615567_3615720_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP023383.1\|WP_001246104.1\|3599572_3599896_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP023383.1\|WP_000281461.1\|3606675_3607326_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP023383.1\|WP_000206450.1\|3608064_3609120_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP023383.1\|WP_001084112.1\|3609664_3611227_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP023383.1\|WP_000517476.1\|3599067_3599379_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP023383.1\|WP_001219242.1\|3597859_3598339_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP023383.1\|WP_000085073.1\|3607307_3608054_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776

Protein	Function_ID	Function_description	E-value
NZ_CP023383.1\|WP_000372108.1\|3601979_3602888_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP023383.1\|WP_000568943.1\|3596813_3597863_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP023383.1\|WP_000490430.1\|3603916_3604954_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP023383.1\|WP_000246138.1\|3598338_3599049_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP023383.1\|WP_049254555.1\|3611324_3614024_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.61295e-180
NZ_CP023383.1\|WP_000029329.1\|3609131_3609668_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP023383.1\|WP_001300563.1\|3614262_3615375_+\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
NZ_CP023383.1\|WP_001173676.1\|3599945_3600551_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
NZ_CP023383.1\|WP_001090386.1\|3600550_3601978_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP023383.1\|WP_000061856.1\|3605465_3605759_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.21674e-65
NZ_CP023383.1\|WP_000144854.1\|3605755_3606679_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	8.96044e-158
NZ_CP023383.1\|WP_001295182.1\|3596071_3596833_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP023383.1\|WP_000956460.1\|3615567_3615720_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
NZ_CP023383.1\|WP_001246104.1\|3599572_3599896_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP023383.1\|WP_000281461.1\|3606675_3607326_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.38075e-91
NZ_CP023383.1\|WP_000206450.1\|3608064_3609120_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.80924e-154
NZ_CP023383.1\|WP_001084112.1\|3609664_3611227_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP023383.1\|WP_000517476.1\|3599067_3599379_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP023383.1\|WP_001219242.1\|3597859_3598339_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP023383.1\|WP_000085073.1\|3607307_3608054_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.94879e-48

>NZ_CP023383.1|WP_000490430.1|3603916_3604954_+|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP023383.1|WP_000372108.1|3601979_3602888_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP023383.1|WP_001090386.1|3600550_3601978_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP023383.1|WP_001173676.1|3599945_3600551_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP023383.1|WP_001246104.1|3599572_3599896_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP023383.1|WP_000517476.1|3599067_3599379_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP023383.1|WP_000246138.1|3598338_3599049_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP023383.1|WP_001219242.1|3597859_3598339_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP023383.1|WP_000568943.1|3596813_3597863_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP023383.1|WP_001295182.1|3596071_3596833_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP023383.1|WP_000061856.1|3605465_3605759_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP023383.1|WP_000144854.1|3605755_3606679_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP023383.1|WP_000281461.1|3606675_3607326_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFTPELSTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSWQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP023383.1|WP_000085073.1|3607307_3608054_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDRFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP023383.1|WP_000206450.1|3608064_3609120_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKVLAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA
>NZ_CP023383.1|WP_000029329.1|3609131_3609668_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP023383.1|WP_001084112.1|3609664_3611227_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISAPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWINVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDEQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP023383.1|WP_049254555.1|3611324_3614024_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKSYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>NZ_CP023383.1|WP_001300563.1|3614262_3615375_+|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>NZ_CP023383.1|WP_000956460.1|3615567_3615720_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK

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Crispr_ID: NZ_CP023383_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023383_6

3632420-3632936

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

8 spacers

The CRISPR arrays of NZ_CP023383_6

>merge|NZ_CP023383|6|3632420-3632936|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCACGTCGGTTTATCCCCGCTGGCGCGGGGAACACGAAATGCTGGTGAGCGTTAATGCCGCAAACACAGGTTTATCCCCGCTGGCGCGGGGAACACATTACGCCTTTTTGCGATTGCCCGGTTTTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGTGTCGGCAAATCCCGAGGAAATAGAACCCCGGTTTATCCCCGCTGGCGCGGGGAACACCGAATCACGCCCCGCTTTTTACCGCGTCAGCGCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTGCTCCTGTTTTGTGCCGTAGTTACCGATCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP023383|6|6|3632420-3632936|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATGCTGGTGAGCGTTAATGCCGCAAACAC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTCGGCAAATCCCGAGGAAATAGAACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGAATCACGCCCCGCTTTTTACCGCGTCAGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGCTCCTGTTTTGTGCCGTAGTTACCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP023383|6|2|3632420-3632936|CRT
TGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATGCTGGTGAGCGTTAATGCCGCAAACAC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTCGGCAAATCCCGAGGAAATAGAACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGAATCACGCCCCGCTTTTTACCGCGTCAGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGCTCCTGTTTTGTGCCGTAGTTACCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP023383|6|2|3632421-3632936|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATGCTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTCGGCAAATCCCGAGGAAATAGAACCCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CGAATCACGCCCCGCTTTTTACCGCGTCAGCGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGCTCCTGTTTTGTGCCGTAGTTACCGATC
GGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023383.1\|WP_000021321.1\|3627894_3628680_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP023383.1\|WP_001299652.1\|3624182_3624962_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP023383.1\|WP_023281448.1\|3642227_3643529_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP023383.1\|WP_000039730.1\|3630302_3631781_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP023383.1\|WP_001288228.1\|3634085_3634226_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023383.1\|WP_001071648.1\|3638422_3639214_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP023383.1\|WP_000226815.1\|3639945_3642180_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP023383.1\|WP_001130266.1\|3622602_3623178_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP023383.1\|WP_000036723.1\|3635171_3636470_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP023383.1\|WP_001199973.1\|3633275_3633947_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP023383.1\|WP_049253382.1\|3622325_3622586_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP023383.1\|WP_023281447.1\|3628998_3630276_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP023383.1\|WP_000186450.1\|3643585_3646342_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP023383.1\|WP_000581941.1\|3639619_3639868_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP023383.1\|WP_000210878.1\|3636557_3638195_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP023383.1\|WP_032161647.1\|3624939_3626277_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP023383.1\|WP_049253269.1\|3639284_3639620_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP023383.1\|WP_000389121.1\|3621063_3622335_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP023383.1\|WP_001299097.1\|3623325_3624186_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP023383.1\|WP_049254805.1\|3626370_3627825_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354

Protein	Function_ID	Function_description	E-value
NZ_CP023383.1\|WP_000021321.1\|3627894_3628680_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP023383.1\|WP_001299652.1\|3624182_3624962_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP023383.1\|WP_023281448.1\|3642227_3643529_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP023383.1\|WP_000039730.1\|3630302_3631781_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	3.68061e-108
NZ_CP023383.1\|WP_000210878.1\|3636557_3638195_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP023383.1\|WP_001071648.1\|3638422_3639214_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP023383.1\|WP_000226815.1\|3639945_3642180_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP023383.1\|WP_001130266.1\|3622602_3623178_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP023383.1\|WP_000036723.1\|3635171_3636470_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP023383.1\|WP_001199973.1\|3633275_3633947_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP023383.1\|WP_049253382.1\|3622325_3622586_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.2067e-41
NZ_CP023383.1\|WP_023281447.1\|3628998_3630276_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.32565e-29
NZ_CP023383.1\|WP_000186450.1\|3643585_3646342_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP023383.1\|WP_000581941.1\|3639619_3639868_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	2.43005e-47
NZ_CP023383.1\|WP_032161647.1\|3624939_3626277_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.50804e-49
NZ_CP023383.1\|WP_049253269.1\|3639284_3639620_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	3.64724e-73
NZ_CP023383.1\|WP_000389121.1\|3621063_3622335_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
NZ_CP023383.1\|WP_001299097.1\|3623325_3624186_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP023383.1\|WP_049254805.1\|3626370_3627825_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.63645e-83

>NZ_CP023383.1|WP_000039730.1|3630302_3631781_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWSVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEINHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP023383.1|WP_023281447.1|3628998_3630276_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAVEAYRNMWLMGMAALVMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP023383.1|WP_000021321.1|3627894_3628680_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP023383.1|WP_049254805.1|3626370_3627825_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDEKVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILRELMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP023383.1|WP_032161647.1|3624939_3626277_-|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVSLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP023383.1|WP_001299652.1|3624182_3624962_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP023383.1|WP_001299097.1|3623325_3624186_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP023383.1|WP_001130266.1|3622602_3623178_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP023383.1|WP_049253382.1|3622325_3622586_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPKGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP023383.1|WP_000389121.1|3621063_3622335_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP023383.1|WP_001199973.1|3633275_3633947_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP023383.1|WP_001288228.1|3634085_3634226_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP023383.1|WP_000036723.1|3635171_3636470_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP023383.1|WP_000210878.1|3636557_3638195_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP023383.1|WP_001071648.1|3638422_3639214_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP023383.1|WP_049253269.1|3639284_3639620_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQARHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP023383.1|WP_000581941.1|3639619_3639868_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPTTLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP023383.1|WP_000226815.1|3639945_3642180_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP023383.1|WP_023281448.1|3642227_3643529_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDLNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP023383.1|WP_000186450.1|3643585_3646342_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
NZ_CP023383_5	5.1\|3605004\|32\|NZ_CP023383\|CRT	3605004-3605035	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	2	0.938
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
NZ_CP023383_5	5.2\|3605065\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605065-3605096	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
NZ_CP023383_6	6.4\|3632632\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632632-3632663	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
NZ_CP023383_6	6.4\|3632632\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632632-3632663	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
NZ_CP023383_6	6.4\|3632632\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632632-3632663	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
NZ_CP023383_6	6.12\|3632632\|33\|NZ_CP023383\|PILER-CR	3632632-3632664	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
NZ_CP023383_6	6.12\|3632632\|33\|NZ_CP023383\|PILER-CR	3632632-3632664	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
NZ_CP023383_6	6.12\|3632632\|33\|NZ_CP023383\|PILER-CR	3632632-3632664	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
NZ_CP023383_6	6.4\|3632632\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632632-3632663	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
NZ_CP023383_6	6.12\|3632632\|33\|NZ_CP023383\|PILER-CR	3632632-3632664	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
NZ_CP023383_5	5.1\|3605004\|32\|NZ_CP023383\|CRT	3605004-3605035	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	112768-112799	7	0.781
NZ_CP023383_6	6.3\|3632571\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632571-3632602	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
NZ_CP023383_5	5.1\|3605004\|32\|NZ_CP023383\|CRT	3605004-3605035	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	141278-141309	8	0.75
NZ_CP023383_5	5.1\|3605004\|32\|NZ_CP023383\|CRT	3605004-3605035	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1428097-1428128	8	0.75
NZ_CP023383_5	5.6\|3605309\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605309-3605340	32	MF773750	Mycobacterium phage OKCentral2016, complete genome	32038-32069	8	0.75
NZ_CP023383_5	5.6\|3605309\|32\|NZ_CP023383\|CRT,PILER-CR,CRISPRCasFinder	3605309-3605340	32	JX307704	Mycobacterium virus Goose, complete genome	32135-32166	8	0.75
NZ_CP023383_6	6.3\|3632571\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632571-3632602	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
NZ_CP023383_6	6.7\|3632815\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632815-3632846	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	965187-965218	8	0.75
NZ_CP023383_6	6.11\|3632571\|33\|NZ_CP023383\|PILER-CR	3632571-3632603	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NZ_CP023383_6	6.5\|3632693\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632693-3632724	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
NZ_CP023383_2	2.1\|1115380\|59\|NZ_CP023383\|CRISPRCasFinder	1115380-1115438	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NZ_CP023383_6	6.4\|3632632\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632632-3632663	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
NZ_CP023383_6	6.4\|3632632\|32\|NZ_CP023383\|CRISPRCasFinder,CRT	3632632-3632663	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
NZ_CP023383_2	2.1\|1115380\|59\|NZ_CP023383\|CRISPRCasFinder	1115380-1115438	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NZ_CP023383_6	6.12\|3632632\|33\|NZ_CP023383\|PILER-CR	3632632-3632664	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_CP023383_6	6.12\|3632632\|33\|NZ_CP023383\|PILER-CR	3632632-3632664	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NZ_CP023383_4	4.1\|3057035\|49\|NZ_CP023383\|CRISPRCasFinder	3057035-3057083	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
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2. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

3. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

4. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

5. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

6. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

7. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

8. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

9. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

10. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

11. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

12. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

13. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

14. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

15. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

16. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

17. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

18. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

19. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

20. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

21. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

22. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

23. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

24. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

25. spacer 5.1|3605004|32|NZ_CP023383|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 2, identity: 0.938

caagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
caagtgatgtccatcatcgcatccagtgcgtc	Protospacer
********.*********************.*

26. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaacgtgttttcacc	Protospacer
******************* ********.***

27. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaacgtgttttcacc	Protospacer
******************* ********.***

28. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgacggtttagaccgtgtttttacc	Protospacer
********* *****.****************

29. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgacggtttagaccgtgtttttacc	Protospacer
********* *****.****************

30. spacer 5.2|3605065|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcataacgtgtttttacc	Protospacer
***************** * ************

31. spacer 6.4|3632632|32|NZ_CP023383|CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

32. spacer 6.4|3632632|32|NZ_CP023383|CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

33. spacer 6.4|3632632|32|NZ_CP023383|CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

34. spacer 6.12|3632632|33|NZ_CP023383|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

35. spacer 6.12|3632632|33|NZ_CP023383|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

36. spacer 6.12|3632632|33|NZ_CP023383|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

37. spacer 6.4|3632632|32|NZ_CP023383|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacc	Protospacer
*********** ********.****** *  *

38. spacer 6.12|3632632|33|NZ_CP023383|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacct	Protospacer
*********** ********.****** *  *

39. spacer 5.1|3605004|32|NZ_CP023383|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

caagtgat-atccatcatcgcatccagtgcgcc	CRISPR spacer
-ggttgatcgtccttcatcgcagccagtgcgcc	Protospacer
 .. **** .*** ******** **********

40. spacer 6.3|3632571|32|NZ_CP023383|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

tggctctgcaacagcagcacccatgaccacgt	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgg	Protospacer
.* ..* ****************.*******

41. spacer 5.1|3605004|32|NZ_CP023383|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.75

caagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
ctcatcgcatccatcatcggttccagtgcgcc	Protospacer
*  .* ..***********  ***********

42. spacer 5.1|3605004|32|NZ_CP023383|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

caagtg---atatccatcatcgcatccagtgcgcc	CRISPR spacer
---gtgcgcccctccatcaccgcttccagtgcgcc	Protospacer
   ***    . *******.*** ***********

43. spacer 5.6|3605309|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 8, identity: 0.75

cgtccggatcggtttcgagaatctctacgctc	CRISPR spacer
cgccgagatcggcttcgaggatctctacgagg	Protospacer
**.* .******.******.*********

44. spacer 5.6|3605309|32|NZ_CP023383|CRT,PILER-CR,CRISPRCasFinder matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 8, identity: 0.75

cgtccggatcggtttcgagaatctctacgctc	CRISPR spacer
cgccgagatcggcttcgaggatctctacgagg	Protospacer
**.* .******.******.*********

45. spacer 6.3|3632571|32|NZ_CP023383|CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggctctgcaacagcagcacccatgaccacgt	CRISPR spacer
catcactgcaacatcagcatccatgaccgcat	Protospacer
.. * ******** *****.********.*.*

46. spacer 6.7|3632815|32|NZ_CP023383|CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgaatcacgccccgctttttaccgcgtcagcg	CRISPR spacer
caatgcccgctccgccttttaccgcgtcagtc	Protospacer
*.*  * ***.****.**************.

47. spacer 6.11|3632571|33|NZ_CP023383|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

tggctctgcaacagcagcacccatgaccacgtc	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgga	Protospacer
.* ..* ****************.*******

48. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

49. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

50. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

51. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

52. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

53. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

54. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

55. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

56. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

57. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

58. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

59. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

60. spacer 6.5|3632693|32|NZ_CP023383|CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

attacgcctttttgcgattgcccggtttttgc	CRISPR spacer
tcgtcatctttttgcgattgggcggttttttc	Protospacer
 .  *..*************  ******** *

61. spacer 2.1|1115380|59|NZ_CP023383|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg-	CRISPR spacer
gagcacagaaccgtaggacggataaggcgttcacgccgcatccggcgat-cgtgcactga	Protospacer
*.   ************ ****************************.**  **** *.*

62. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

63. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

64. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

65. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

66. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

67. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

68. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

69. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

70. spacer 6.4|3632632|32|NZ_CP023383|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaa	Protospacer
 ..   .*** ************.*******

71. spacer 6.4|3632632|32|NZ_CP023383|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaa	Protospacer
 ..   .*** ************.*******

72. spacer 2.1|1115380|59|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

-ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg	CRISPR spacer
tcgcacca-aaccgtaggccggataaggcgtttacgccgcatccggcaaaaagccgtacc	Protospacer
  *..*** ***********************.**************** ***.  * *

73. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

74. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

75. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

76. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

77. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

78. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

79. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

80. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

81. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

82. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

83. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

84. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

85. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

86. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

87. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

88. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

89. spacer 6.12|3632632|33|NZ_CP023383|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

90. spacer 6.12|3632632|33|NZ_CP023383|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

91. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

92. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

93. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

94. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

95. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

96. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

97. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

98. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

99. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

100. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

101. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

102. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

103. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

104. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

105. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

106. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

107. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

108. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

109. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

110. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

111. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

112. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

113. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

114. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

115. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

116. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

117. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

118. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

119. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

120. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

121. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

122. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

123. spacer 4.1|3057035|49|NZ_CP023383|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

551742 : 616690

Vibrio_phage(17.65%)

tRNA,integrase,transposase,protease

attL 582146:582161|attR 586640:586655

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001162171.1\|551742_553095_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_001232255.1\|553277_553664_+	cytochrome b562	NA	NA	NA	NA
WP_001106226.1\|553708_554173_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	H6WXC9	Vibrio_phage	2.5e-52	59.7
WP_000187791.1\|554330_556469_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	9.1e-267	64.6
WP_001301172.1\|556862_558518_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_001299664.1\|558567_559989_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_001181312.1\|560107_561055_-	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	7.9e-13	21.8
WP_001387276.1\|561239_561293_+	mgtA regulatory leader peptide MgtL	NA	NA	NA	NA
WP_000471885.1\|561433_564130_+	magnesium-translocating P-type ATPase	M1HLC0	Paramecium_bursaria_Chlorella_virus	8.2e-47	27.6
WP_000047539.1\|564335_564722_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_000148581.1\|564794_565256_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_000013046.1\|565268_566204_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.2
WP_001296693.1\|566207_566342_-	pyr operon leader peptide	NA	NA	NA	NA
WP_000230281.1\|566622_567018_-	RidA family protein	NA	NA	NA	NA
WP_000500689.1\|567148_567862_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000256681.1\|567932_568526_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001326836.1\|568670_569123_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000036448.1\|569245_570841_+	hypothetical protein	NA	NA	NA	NA
WP_000012907.1\|570896_571901_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000002953.1\|572062_572479_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_001059412.1\|572524_573028_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000079655.1\|573212_574409_+	DUF898 domain-containing protein	NA	NA	NA	NA
WP_000416382.1\|574464_577320_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
WP_000786399.1\|577319_577763_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_000397144.1\|578116_579628_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
WP_000584107.1\|579894_580995_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_001545798.1\|580994_582077_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
582146:582161	attL	NA	NA	NA	NA
WP_001352285.1\|583869_584889_-	NADPH-dependent aldehyde reductase Ahr	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	4.9e-45	30.7
WP_000772679.1\|585332_586598_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	4.8e-74	40.5
WP_001446910.1\|586640_587015_-	hypothetical protein	NA	NA	NA	NA
586640:586655	attR	NA	NA	NA	NA
WP_001352286.1\|587017_589198_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_001352287.1\|589315_590218_-	DUF1837 domain-containing protein	NA	NA	NA	NA
WP_001254928.1\|590810_591962_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.2e-41	35.3
WP_000349548.1\|592910_593114_-	hypothetical protein	NA	NA	NA	NA
WP_001300609.1\|593152_593935_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.0e-139	100.0
WP_000255944.1\|593931_594954_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
WP_049254365.1\|595201_595555_+	hypothetical protein	NA	NA	NA	NA
WP_001352291.1\|595764_596091_-	hypothetical protein	NA	NA	NA	NA
WP_001375333.1\|596999_597434_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_073978005.1\|597451_598060_+	maturase	NA	NA	NA	NA
WP_000416153.1\|598784_599816_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	8.0e-19	27.0
WP_000916805.1\|600086_600530_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000705931.1\|600545_600833_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000345346.1\|600845_602102_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_001446914.1\|602312_602552_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-13	66.0
WP_089516276.1\|602937_604211_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.6e-176	98.7
WP_000107480.1\|604355_605369_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_000998347.1\|605380_606697_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_000350265.1\|606724_607645_-	ribokinase	NA	NA	NA	NA
WP_001295538.1\|607950_608733_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_001387298.1\|608734_608833_-	acetolactate synthase	NA	NA	NA	NA
WP_001296706.1\|609931_610060_+	alcohol dehydrogenase	NA	NA	NA	NA
WP_001390362.1\|610078_610183_+	hypothetical protein	NA	NA	NA	NA
WP_000145475.1\|610240_610897_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_001375347.1\|611144_612422_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_032215506.1\|612484_614482_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	5.7e-21	25.9
WP_001254928.1\|615538_616690_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.2e-41	35.3

DBSCAN-SWA_2

1584615 : 1639869

Salmonella_phage(48.39%)

terminase,tail,portal,integrase

attL 1603517:1603536|attR 1645084:1645103

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000290938.1\|1584615_1585647_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.9e-105	56.1
WP_072005502.1\|1585833_1586025_-	hypothetical protein	A0A0R6PIH8	Moraxella_phage	2.4e-09	70.5
WP_016237786.1\|1586040_1586610_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	9.4e-38	42.3
WP_001247707.1\|1586735_1586957_+	hypothetical protein	NA	NA	NA	NA
WP_000460883.1\|1586989_1587499_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	1.3e-86	98.2
WP_000956182.1\|1587506_1587707_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
WP_000963475.1\|1587670_1588012_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.7e-55	98.2
WP_001244223.1\|1588079_1588313_+	DUF2732 family protein	E5G6L6	Salmonella_phage	3.2e-32	97.4
WP_032258242.1\|1588312_1588540_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.9e-35	98.7
WP_032258243.1\|1588536_1589394_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.5e-156	94.7
WP_032258244.1\|1589390_1591805_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.3
WP_001154434.1\|1591958_1592147_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|1592157_1592391_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000497736.1\|1592700_1593852_+	TIGR02391 family protein	NA	NA	NA	NA
WP_032258245.1\|1593903_1594938_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	2.4e-172	89.0
WP_001098431.1\|1594937_1596704_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_107328620.1\|1596873_1597632_+\|tail	phage tail protein	E5G6Q1	Salmonella_phage	2.9e-90	75.0
WP_032258246.1\|1597628_1598114_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.8e-66	80.0
WP_032258247.1\|1598110_1599211_+	phage late control D family protein	E5G6Q3	Salmonella_phage	3.4e-177	85.8
WP_000972391.1\|1599301_1599520_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_001024876.1\|1599755_1601441_-	aspartate:alanine antiporter	NA	NA	NA	NA
WP_000681108.1\|1601710_1602088_+	hypothetical protein	NA	NA	NA	NA
WP_001195240.1\|1602117_1602375_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	8.6e-23	61.9
WP_001201560.1\|1602534_1602822_+	DUF1418 family protein	NA	NA	NA	NA
WP_000189159.1\|1602805_1603528_+	nitroreductase NfsA	NA	NA	NA	NA
1603517:1603536	attL	NA	NA	NA	NA
WP_000684321.1\|1603588_1604491_+	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
WP_000203025.1\|1604578_1605055_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_000126072.1\|1605405_1606518_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_000996005.1\|1606612_1607746_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.4e-29	34.0
WP_000105430.1\|1607755_1608709_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_001061658.1\|1608705_1609551_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_000389260.1\|1609610_1610099_+	YbjO family protein	NA	NA	NA	NA
WP_001149682.1\|1610139_1611267_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	1.0e-27	27.3
WP_001352074.1\|1611465_1612197_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000464491.1\|1612487_1613156_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_001001691.1\|1613155_1613872_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_000756569.1\|1613878_1614610_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000027205.1\|1614627_1615356_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	6.0e-29	36.7
WP_001270734.1\|1615573_1616089_-	lipoprotein	NA	NA	NA	NA
WP_001160739.1\|1616214_1616538_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_001252135.1\|1616534_1617365_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
WP_001338420.1\|1617361_1618375_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001136554.1\|1618473_1619904_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000566376.1\|1619914_1620916_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_000815337.1\|1620952_1622671_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.3e-31	24.0
WP_000178676.1\|1622803_1623772_-	NADH oxidoreductase	NA	NA	NA	NA
WP_000458809.1\|1623783_1625436_-	hydroxylamine reductase	NA	NA	NA	NA
WP_000491142.1\|1625579_1626479_-	L-lysine exporter LysO	NA	NA	NA	NA
WP_001298299.1\|1626973_1627669_-	aquaporin Z	NA	NA	NA	NA
WP_000599825.1\|1628094_1629753_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_001380339.1\|1629749_1630706_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_000746443.1\|1630856_1631972_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_000188144.1\|1631968_1633915_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
WP_000410785.1\|1633987_1634212_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000092883.1\|1634616_1635855_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	4.0e-126	52.5
WP_001206975.1\|1636274_1636484_+	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	1.5e-17	71.4
WP_157732779.1\|1636598_1636772_-	hypothetical protein	NA	NA	NA	NA
WP_000094457.1\|1636829_1637027_-	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	9.5e-06	43.1
WP_157732780.1\|1637232_1637436_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_001113144.1\|1637428_1637749_+	hypothetical protein	NA	NA	NA	NA
WP_001710148.1\|1637755_1638055_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_048230479.1\|1638051_1639869_+	DNA primase	Q7M2A8	Enterobacteria_phage	1.7e-128	48.1
1645084:1645103	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1914602 : 1954475

Escherichia_phage(30.77%)

tRNA,transposase,integrase

attL 1933771:1933830|attR 1959272:1960039

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001297484.1\|1914602_1915709_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|1915762_1916224_-	phosphatase NudJ	NA	NA	NA	NA
WP_032258358.1\|1916233_1916887_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444488.1\|1917058_1918309_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.2e-22	96.3
WP_001295666.1\|1918411_1918735_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	3.0e-41	65.4
WP_032082692.1\|1919272_1919383_-	hypothetical protein	NA	NA	NA	NA
WP_000373101.1\|1919435_1919840_-	DUF1398 domain-containing protein	NA	NA	NA	NA
WP_000332303.1\|1920060_1920792_-	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	2.7e-53	50.5
WP_001299269.1\|1920996_1922208_-	blue light-responsive regulator BluF	NA	NA	NA	NA
WP_000554140.1\|1922521_1922758_+	two-component-system connector protein YcgZ	NA	NA	NA	NA
WP_000858002.1\|1922800_1923073_+	two-component-system connector protein YmgA	NA	NA	NA	NA
WP_000888772.1\|1923101_1923368_+	biofilm/acid-resistance regulator AriR	NA	NA	NA	NA
WP_001065752.1\|1923480_1923729_+	hypothetical protein	NA	NA	NA	NA
WP_001246498.1\|1924060_1925584_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_001065861.1\|1925715_1925934_+	hypothetical protein	NA	NA	NA	NA
WP_032258357.1\|1926333_1927419_+	porin	NA	NA	NA	NA
WP_000428546.1\|1929858_1930452_+	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_001089068.1\|1930564_1931770_-	tetracycline efflux MFS transporter Tet(B)	A0A2H4UVM2	Bodo_saltans_virus	3.0e-09	24.4
WP_001322387.1\|1931848_1932475_+	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001284954.1\|1932452_1933139_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000460651.1\|1933146_1933533_-	hypothetical protein	NA	NA	NA	NA
WP_049802299.1\|1933525_1933789_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
1933771:1933830	attL	NA	NA	NA	NA
WP_000412211.1\|1934761_1935421_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|1935621_1935999_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001138064.1\|1936065_1939032_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147567.1\|1939034_1939595_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|1939720_1940071_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|1940273_1941287_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001389366.1\|1941444_1941918_+	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IBQ4	Erwinia_phage	7.6e-17	33.1
WP_000503573.1\|1942048_1942837_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
WP_000679427.1\|1943042_1943390_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|1943383_1944223_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376616.1\|1944350_1944554_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|1944709_1945915_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|1945925_1946231_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|1946457_1947222_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|1947714_1948299_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000219391.1\|1949532_1950438_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067855.1\|1950559_1951264_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|1951414_1952230_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|1952419_1953124_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000935452.1\|1953170_1954475_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
1959272:1960039	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2343632 : 2391754

Enterobacteria_phage(26.47%)

protease,transposase,integrase,lysis,tail

attL 2354067:2354082|attR 2384164:2384179

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000527809.1\|2343632_2345093_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.5e-42	29.6
WP_000347482.1\|2345181_2346465_-	MHS family MFS transporter	NA	NA	NA	NA
WP_120795384.1\|2347069_2347183_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|2347251_2347485_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000078177.1\|2347801_2348392_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000885611.1\|2348489_2349065_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
WP_049254577.1\|2349064_2350870_-	hypothetical protein	A0A0K2FJ14	Enterobacteria_phage	1.3e-213	99.1
WP_000453611.1\|2350844_2351390_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
WP_001368374.1\|2351778_2352012_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	84.1
WP_000373090.1\|2352069_2352480_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.5e-56	79.4
WP_001019606.1\|2352631_2352805_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001309517.1\|2352976_2353132_-	hypothetical protein	NA	NA	NA	NA
WP_120795388.1\|2353211_2353277_-	Qin prophage; protein YnfR	NA	NA	NA	NA
WP_071524604.1\|2353279_2353468_-	cold-shock protein	NA	NA	NA	NA
WP_000066495.1\|2353478_2353691_-	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_001071769.1\|2354053_2354551_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
2354067:2354082	attL	NA	NA	NA	NA
WP_001092971.1\|2354547_2355081_-	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
WP_000189916.1\|2355077_2355389_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
WP_000839590.1\|2355393_2355609_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.1e-31	94.4
WP_000066484.1\|2356362_2356578_-	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
WP_000087756.1\|2356878_2357091_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_120795389.1\|2357145_2357235_+	Qin prophage; protein YnfS	NA	NA	NA	NA
WP_001047135.1\|2357512_2358265_-	antitermination protein	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
WP_001265199.1\|2358278_2359328_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-112	57.0
WP_012304870.1\|2359329_2359608_-	hypothetical protein	NA	NA	NA	NA
WP_000980994.1\|2359674_2359926_-	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|2360142_2360298_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000323025.1\|2360369_2360657_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|2360656_2360896_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_001326990.1\|2360920_2361226_+	hypothetical protein	NA	NA	NA	NA
WP_001301033.1\|2361428_2361761_+	protein FlxA	NA	NA	NA	NA
WP_000589005.1\|2362197_2363511_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000955178.1\|2363688_2363871_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	6.3e-12	74.5
WP_001341330.1\|2364934_2365168_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	7.8e-39	100.0
WP_001333339.1\|2365216_2366752_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.5e-289	99.4
WP_001310834.1\|2367271_2367628_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.6e-38	69.6
WP_001151262.1\|2367624_2368047_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.0
WP_001296941.1\|2370129_2370366_+	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_000876958.1\|2370400_2371681_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	3.3e-155	62.1
WP_001360138.1\|2371700_2371811_-	hypothetical protein	NA	NA	NA	NA
WP_000836066.1\|2371868_2372888_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001295394.1\|2372899_2374114_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000598292.1\|2374319_2374646_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
WP_000705211.1\|2374780_2375122_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138581.1\|2375156_2375717_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_001321287.1\|2375719_2376430_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_001300836.1\|2376537_2376843_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_000041675.1\|2377041_2379468_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	7.7e-214	49.2
WP_001340362.1\|2379528_2381952_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.7e-208	48.6
WP_000213028.1\|2381962_2382580_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	9.5e-76	59.6
WP_049254808.1\|2382581_2383436_+	dimethyl sulfoxide reductase	NA	NA	NA	NA
WP_000148710.1\|2383478_2384093_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
WP_001315626.1\|2384251_2385544_+	voltage-gated ClC-type chloride channel ClcB	NA	NA	NA	NA
2384164:2384179	attR	NA	NA	NA	NA
WP_000919231.1\|2385496_2386192_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_000225262.1\|2386316_2387537_-	DNA-binding transcriptional repressor Mlc	NA	NA	NA	NA
WP_001019525.1\|2387671_2388565_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000091840.1\|2388671_2389925_+	MFS transporter	NA	NA	NA	NA
WP_000743957.1\|2390321_2390657_+	acid shock protein	NA	NA	NA	NA
WP_000233090.1\|2390749_2390833_+	hypothetical protein	NA	NA	NA	NA
WP_001260865.1\|2390932_2391754_+\|protease	serine protease	NA	NA	NA	NA

DBSCAN-SWA_5

2821346 : 2827775

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000704908.1\|2821346_2822513_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	1.4e-112	55.0
WP_001021402.1\|2822693_2823248_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.5e-51	57.6
WP_000698224.1\|2823262_2824153_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.1e-28	33.6
WP_000676429.1\|2824184_2825054_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.8e-111	66.7
WP_000699389.1\|2825080_2826145_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.8e-105	55.0
WP_000043540.1\|2826368_2827775_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.6e-38	28.9

DBSCAN-SWA_6

2919951 : 2928259

Enterobacteria_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001375261.1\|2919951_2921952_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.1
WP_001295429.1\|2922076_2922538_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_000950409.1\|2922577_2923048_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
WP_000598641.1\|2923094_2923814_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2923810_2925496_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|2925717_2926449_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|2926508_2926616_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|2926596_2927328_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569315.1\|2927332_2928259_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_7

3147902 : 3215974

Enterobacteria_phage(38.71%)

integrase,holin,terminase,lysis,tRNA,tail,head

attL 3170191:3170207|attR 3219649:3219665

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023281383.1\|3147902_3149909_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559764.1\|3150029_3150308_-	YfcL family protein	NA	NA	NA	NA
WP_024238824.1\|3150341_3150890_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000447361.1\|3150889_3151699_-	TSUP family transporter	NA	NA	NA	NA
WP_001043825.1\|3151698_3152523_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_032161700.1\|3152526_3153612_-	chorismate synthase	A0A291AU41	Pandoravirus	2.7e-89	47.5
WP_001300582.1\|3153646_3154579_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730806.1\|3154744_3155296_+	endonuclease SmrB	NA	NA	NA	NA
WP_000698745.1\|3155366_3156188_-	YfcO family protein	NA	NA	NA	NA
WP_001043398.1\|3156189_3156729_-	fimbrial protein	NA	NA	NA	NA
WP_001232541.1\|3156725_3157214_-	fimbrial protein	NA	NA	NA	NA
WP_072132949.1\|3157210_3157723_-	fimbrial protein	NA	NA	NA	NA
WP_001281606.1\|3157722_3158475_-	fimbrial chaperone	NA	NA	NA	NA
WP_063097536.1\|3161707_3161917_-	hypothetical protein	NA	NA	NA	NA
WP_000033316.1\|3161998_3162562_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_001195819.1\|3163242_3163728_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_001618735.1\|3163930_3166075_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_001530662.1\|3166074_3167385_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_001296261.1\|3167565_3167850_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001400735.1\|3168221_3169562_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
3170191:3170207	attL	NA	NA	NA	NA
WP_096040807.1\|3171451_3171763_+	hypothetical protein	NA	NA	NA	NA
WP_000776768.1\|3171944_3172700_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_024238820.1\|3172993_3173926_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	5.7e-165	98.7
WP_000958671.1\|3174237_3175395_+\|integrase	prophage integrase IntS	A5VW56	Enterobacteria_phage	5.7e-223	100.0
WP_062810236.1\|3175482_3175899_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	4.1e-22	47.6
WP_073978006.1\|3175901_3176801_-	hypothetical protein	A0A0M3ULD8	Salmonella_phage	6.7e-62	73.7
WP_052905984.1\|3176800_3177481_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	5.9e-103	78.3
WP_062810237.1\|3177477_3178677_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	4.1e-184	83.1
WP_001270634.1\|3178676_3179030_-	hypothetical protein	A0A0M4R339	Salmonella_phage	3.1e-55	90.6
WP_062810238.1\|3179029_3179785_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	3.2e-110	84.9
WP_062810239.1\|3179827_3180244_-	toxin YafO, type II toxin-antitoxin system family protein	NA	NA	NA	NA
WP_001766747.1\|3180245_3180818_-	hypothetical protein	NA	NA	NA	NA
WP_062810240.1\|3180986_3181328_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	5.5e-33	86.7
WP_025404368.1\|3181331_3182393_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	2.0e-158	80.3
WP_016233440.1\|3182395_3182698_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	2.4e-48	90.0
WP_001420197.1\|3182697_3183285_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	6.9e-84	88.5
WP_062810241.1\|3183284_3185273_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	1.8e-269	74.4
WP_023565715.1\|3185450_3185903_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	4.7e-56	72.7
WP_000109249.1\|3185906_3186347_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	7.0e-57	75.3
WP_062810242.1\|3186357_3187503_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.0e-160	73.5
WP_001349562.1\|3187506_3188070_-	hypothetical protein	A0A0M4R331	Salmonella_phage	3.4e-80	76.3
WP_062810243.1\|3188044_3188434_-	hypothetical protein	A0A0M3ULK0	Salmonella_phage	3.3e-66	95.3
WP_062810244.1\|3188420_3188975_-	hypothetical protein	A0A0M4S631	Salmonella_phage	7.4e-80	83.2
WP_062810245.1\|3188971_3189379_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	5.7e-69	94.8
WP_001107515.1\|3189344_3189566_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	7.7e-12	68.6
WP_062810246.1\|3189607_3190549_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	8.3e-156	87.2
WP_062810247.1\|3190560_3191064_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	2.7e-73	82.6
WP_062810248.1\|3191068_3192289_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.4e-203	89.3
WP_096040808.1\|3192303_3193041_-\|head	phage head morphogenesis protein	A0A0M4REK0	Salmonella_phage	5.0e-108	95.0
WP_062810250.1\|3192928_3194395_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.1e-266	93.4
WP_062810251.1\|3194394_3196017_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	96.1
WP_050194107.1\|3196019_3196571_-\|terminase	terminase small subunit	G0ZND3	Cronobacter_phage	1.6e-66	69.2
WP_053903632.1\|3196593_3196812_+	hypothetical protein	NA	NA	NA	NA
WP_021528610.1\|3197303_3197909_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	2.7e-107	96.5
WP_062810252.1\|3198058_3198496_-\|lysis	lysis protein	Q9MCN3	Enterobacteria_phage	5.5e-70	97.2
WP_000229392.1\|3198492_3198969_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.7e-88	100.0
WP_000783734.1\|3198952_3199276_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_001235459.1\|3199952_3200576_-	antitermination protein	K7P6X1	Enterobacteria_phage	3.0e-114	100.0
WP_062810253.1\|3200572_3201238_-	serine/threonine protein phosphatase	K7P721	Enterobacteria_phage	3.6e-129	97.7
WP_062810254.1\|3201234_3201840_-	recombination protein NinG	A0A1I9LJQ2	Stx_converting_phage	1.6e-96	98.5
WP_000950963.1\|3201832_3202009_-	protein ninF	Q76H71	Enterobacteria_phage	6.7e-27	100.0
WP_062810255.1\|3202001_3202364_-	DUF2591 domain-containing protein	K7PH48	Enterobacterial_phage	5.8e-65	97.5
WP_001254255.1\|3202366_3202543_-	NinE family protein	A5VW90	Enterobacteria_phage	4.6e-28	100.0
WP_000153259.1\|3202539_3203067_-	phage N-6-adenine-methyltransferase	K7PMG2	Enterobacteria_phage	9.5e-101	100.0
WP_000736913.1\|3203063_3203504_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_062810256.1\|3203578_3204955_-	AAA family ATPase	A0A0P0ZC27	Stx2-converting_phage	1.3e-253	99.8
WP_001608293.1\|3204951_3205773_-	replication protein	K7PJZ3	Enterobacterial_phage	2.0e-153	99.6
WP_001177649.1\|3205955_3206234_-	transcriptional regulator	K7P7A2	Enterobacteria_phage	4.7e-43	98.9
WP_000437875.1\|3206352_3206553_-	hypothetical protein	A4KWT7	Enterobacteria_phage	4.3e-30	100.0
WP_000104863.1\|3206653_3207367_+	LexA family transcriptional regulator	M1FN96	Enterobacteria_phage	1.6e-127	100.0
WP_000788349.1\|3207479_3208319_+	protein rexA	M1FPD4	Enterobacteria_phage	3.7e-155	100.0
WP_001245922.1\|3208334_3208769_+	protein rexB	M1FPN8	Enterobacteria_phage	1.9e-70	100.0
WP_023146901.1\|3209233_3209566_+	antitermination protein	Q716D8	Shigella_phage	1.4e-54	99.1
WP_062810257.1\|3209766_3210237_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	4.1e-87	98.1
WP_000065355.1\|3210387_3210756_+	DUF2528 family protein	K7PGR6	Enterobacteria_phage	1.2e-65	100.0
WP_000972063.1\|3210831_3210966_+	hypothetical protein	K7PHK2	Enterobacteria_phage	3.1e-16	100.0
WP_001243355.1\|3210950_3211103_+	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	4.7e-21	100.0
WP_000365280.1\|3211357_3212065_+	recombinase	K7PKU3	Enterobacteria_phage	7.6e-138	100.0
WP_062810259.1\|3212065_3212539_+	single-stranded DNA-binding protein	G8EYH4	Enterobacteria_phage	2.1e-59	96.2
WP_001111298.1\|3213041_3213335_+	DUF2856 family protein	K7P7E6	Enterobacteria_phage	1.9e-50	99.0
WP_062810260.1\|3213345_3213513_+	DUF2737 family protein	G9L664	Escherichia_phage	5.6e-23	98.2
WP_000109679.1\|3213509_3213809_+	hypothetical protein	Q716F3	Shigella_phage	4.0e-56	97.0
WP_077861896.1\|3213810_3214587_+	ead/Ea22-like family protein	Q76H45	Enterobacteria_phage	1.2e-67	71.1
WP_001336414.1\|3214671_3214956_+	hypothetical protein	NA	NA	NA	NA
WP_001336413.1\|3214933_3215086_+	hypothetical protein	Q71T70	Escherichia_phage	5.1e-07	73.7
WP_001281192.1\|3215304_3215649_+	hypothetical protein	K7PJY7	Enterobacterial_phage	5.3e-60	100.0
WP_001163428.1\|3215773_3215974_+	response regulator inhibitor TorI	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
3219649:3219665	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3583650 : 3596833

Escherichia_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272928.1\|3583650_3586212_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6
WP_001141323.1\|3586317_3586974_+	protein-serine/threonine phosphatase	K7P7V3	Enterobacteria_phage	3.3e-50	45.8
WP_001295181.1\|3587024_3587792_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_000847985.1\|3587987_3588896_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590405.1\|3588892_3590155_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	8.3e-135	61.0
WP_001278994.1\|3590151_3590790_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_001136918.1\|3590794_3591571_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_049254918.1\|3591659_3593024_+	GntP family transporter	NA	NA	NA	NA
WP_000081550.1\|3593117_3594110_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_001272590.1\|3594172_3595312_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000254708.1\|3595451_3596078_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001295182.1\|3596071_3596833_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0

DBSCAN-SWA_9

3826786 : 3888175

Enterobacteria_phage(22.22%)

tRNA,integrase,transposase,protease

attL 3815053:3815071|attR 3863333:3863351

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3815053:3815071	attL	NA	NA	NA	NA
WP_001300769.1\|3826786_3827284_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_000286500.1\|3827378_3828086_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001300912.1\|3828165_3828897_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593273.1\|3828909_3829860_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|3829968_3830532_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017106.1\|3830531_3830948_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001618842.1\|3831131_3832112_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|3832129_3832834_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|3832851_3833418_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_000994920.1\|3833414_3833705_+	YggU family protein	NA	NA	NA	NA
WP_001174735.1\|3833712_3834306_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_049290749.1\|3834298_3835435_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_001460056.1\|3835498_3836506_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394131.1\|3836622_3837669_-	L-asparaginase 2	NA	NA	NA	NA
WP_024238452.1\|3837844_3838564_-	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_001107564.1\|3838747_3839074_-	YggL family protein	NA	NA	NA	NA
WP_000786911.1\|3839073_3839793_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001321419.1\|3839953_3841006_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091700.1\|3841033_3841309_+	oxidative damage protection protein	NA	NA	NA	NA
WP_023281469.1\|3841373_3842453_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001360964.1\|3842654_3843911_+	nucleoside permease	NA	NA	NA	NA
WP_024238454.1\|3843960_3846096_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234514.1\|3846493_3847201_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218742.1\|3847558_3848743_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.7e-121	53.1
WP_000053331.1\|3848892_3849903_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000253907.1\|3849998_3852125_+	alpha-galactosidase	NA	NA	NA	NA
WP_001083368.1\|3852187_3853465_+	MFS transporter	NA	NA	NA	NA
WP_000813678.1\|3853464_3854895_+	glycoside hydrolase family 32 protein	NA	NA	NA	NA
WP_001037798.1\|3855089_3856484_+	glycoporin	NA	NA	NA	NA
WP_100620379.1\|3857748_3858558_+	hypothetical protein	NA	NA	NA	NA
WP_001282653.1\|3858554_3859310_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	6.2e-45	43.8
WP_023181050.1\|3859326_3860862_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	6.6e-102	40.7
WP_023181051.1\|3861035_3861428_+	hypothetical protein	NA	NA	NA	NA
WP_024179174.1\|3861571_3863245_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_001238009.1\|3863297_3863495_-	hypothetical protein	NA	NA	NA	NA
3863333:3863351	attR	NA	NA	NA	NA
WP_000766273.1\|3863634_3863901_-	hypothetical protein	NA	NA	NA	NA
WP_096040809.1\|3863897_3865469_-	cobalamin adenosyltransferase	NA	NA	NA	NA
WP_001207400.1\|3865515_3866595_-	hypothetical protein	NA	NA	NA	NA
WP_000785681.1\|3866643_3867540_-	WYL domain-containing protein	NA	NA	NA	NA
WP_001389182.1\|3867959_3868697_-	porin family protein	NA	NA	NA	NA
WP_000335224.1\|3869015_3869489_+	H-NS histone family protein	NA	NA	NA	NA
WP_001232703.1\|3870040_3871048_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_023181052.1\|3871073_3872483_-	sucrose-6-phosphate hydrolase	F8WPR5	Bacillus_phage	1.1e-15	22.9
WP_000344909.1\|3872482_3873853_-	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA
WP_000277208.1\|3873913_3875431_-	carbohydrate porin	NA	NA	NA	NA
WP_000107666.1\|3875598_3876519_-	aminoimidazole riboside kinase	NA	NA	NA	NA
WP_085948316.1\|3877227_3878500_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_000836532.1\|3878786_3879449_-	DNA-binding protein	NA	NA	NA	NA
WP_000765976.1\|3879634_3880594_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_001389183.1\|3880615_3880993_+	RidA family protein	NA	NA	NA	NA
WP_001389184.1\|3881007_3882240_+	MFS transporter	NA	NA	NA	NA
WP_000624710.1\|3883260_3883611_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.6e-40	64.7
WP_000422706.1\|3883607_3884027_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.3e-44	90.7
WP_094338647.1\|3884283_3885557_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	6.1e-170	95.0
WP_000301136.1\|3885770_3886727_+	hypothetical protein	NA	NA	NA	NA
WP_001328257.1\|3886707_3887637_-	DNA (cytosine-5-)-methyltransferase	A0A1P8DJM9	Virus_Rctr41k	1.4e-51	38.1
WP_000745631.1\|3888076_3888175_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023384

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023383

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection