CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023415	Desulfovibrio sp. G11 chromosome, complete genome	3 crisprs	cas3,WYL,DEDDh,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,csa3	0	16	17	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023415_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023415_1

747051-747137

Orphan

Consensus_repeat	Method
CGGCACACGCCTGTACGCGGAGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023415_1

>merge|NZ_CP023415|1|747051-747137|CRISPRCasFinder
CGGCACACGCCTGTACGCGGAGGATGCGGACGGGAACATTGACGCGCCCCACCCATTTACCGGCACACGCCTGTACGCGGAGGATGC

>NZ_CP023415|1|1|747051-747137|CRISPRCasFinder
CGGCACACGCCTGTACGCGGAGGATGC	GGACGGGAACATTGACGCGCCCCACCCATTTAC
CGGCACACGCCTGTACGCGGAGGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023415.1\|WP_012625440.1\|745063_745528_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|378246
NZ_CP023415.1\|WP_072311228.1\|750640_751192_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023415.1\|WP_012625431.1\|753241_753901_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023415.1\|WP_012625448.1\|734185_734875_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP023415.1\|WP_072311223.1\|741502_743911_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP023415.1\|WP_072311224.1\|744119_745067_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP023415.1\|WP_072311227.1\|749983_750565_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP023415.1\|WP_012625449.1\|733778_734120_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380358
NZ_CP023415.1\|WP_072311222.1\|735026_736577_-\|capreomycidine-hydroxylase	unknown	unknown	gnl\|CDD\|224512
NZ_CP023415.1\|WP_049757423.1\|754493_755291_-\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|376413
NZ_CP023415.1\|WP_012625442.1\|743907_744123_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023415.1\|WP_143142559.1\|747587_748538_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|224458
NZ_CP023415.1\|WP_083577858.1\|737348_738389_+\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|239599
NZ_CP023415.1\|WP_012625432.1\|752492_753245_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108
NZ_CP023415.1\|WP_012625444.1\|738531_741255_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376913
NZ_CP023415.1\|WP_072311229.1\|751678_752113_-\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP023415.1\|WP_012625446.1\|736661_737045_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374648
NZ_CP023415.1\|WP_012625430.1\|753900_754497_-\|imidazoleglycerol-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|153419
NZ_CP023415.1\|WP_072311226.1\|748534_749806_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133025
NZ_CP023415.1\|WP_012625434.1\|751340_751679_-\|multidrug-transporter	unknown	unknown	gnl\|CDD\|182618

Protein	Function_ID	Function_description	E-value
NZ_CP023415.1\|WP_012625440.1\|745063_745528_+\|oxidoreductase	gnl\|CDD\|378246	pfam09719, C_GCAxxG_C_C, Putative redox-active protein (C_GCAxxG_C_C). This entry represents a putative redox-active protein of about 140 residues, with four perfectly conserved Cys residues. It includes a CGAXXG motif. Most members are found within one or two loci of transporter or oxidoreductase genes. A member from Geobacter sulfurreducens, located in a molybdenum transporter operon, has a TAT (twin-arginine translocation) signal sequence for Sec-independent transport across the plasma membrane, a hallmark of bound prosthetic groups such as FeS clusters.	3.40286e-15
NZ_CP023415.1\|WP_143142559.1\|747587_748538_+\|AMP-binding-protein	gnl\|CDD\|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	1.17733e-36
NZ_CP023415.1\|WP_072311223.1\|741502_743911_+\|hypothetical-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	3.65623e-17
NZ_CP023415.1\|WP_012625448.1\|734185_734875_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.61732e-29
NZ_CP023415.1\|WP_072311227.1\|749983_750565_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	2.10566e-55
NZ_CP023415.1\|WP_012625449.1\|733778_734120_-\|cupin-domain-containing-protein	gnl\|CDD\|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	8.39269e-38
NZ_CP023415.1\|WP_072311222.1\|735026_736577_-\|capreomycidine-hydroxylase	gnl\|CDD\|224512	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis].	5.81412e-17
NZ_CP023415.1\|WP_049757423.1\|754493_755291_-\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|376413	pfam00902, TatC, Sec-independent protein translocase protein (TatC). The bacterial Tat system has a remarkable ability to transport folded proteins even enzyme complexes across the cytoplasmic membrane. It is structurally and mechanistically similar to the Delta pH-driven thylakoidal protein import pathway. A functional Tat system or Delta pH-dependent pathway requires three integral membrane proteins: TatA/Tha4, TatB/Hcf106 and TatC/cpTatC. The TatC protein is essential for the function of both pathways. It might be involved in twin-arginine signal peptide recognition, protein translocation and proton translocation. Sequence analysis predicts that TatC contains six transmembrane helices (TMHs), and experimental data confirmed that N- and C-termini of TatC or cpTatC are exposed to the cytoplasmic or stromal face of the membrane. The cytoplasmic N-terminus and the first cytoplasmic loop region of the Escherichia coli TatC protein are essential for protein export. At least two TatC molecules co-exist within each Tat translocon.	9.03563e-85
NZ_CP023415.1\|WP_012625430.1\|753900_754497_-\|imidazoleglycerol-phosphate-dehydratase	gnl\|CDD\|153419	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and some eubacteria while they are encoded as bifunctional enzymes in other eubacteria, such that the enzyme is fused to histidinol-phosphate phosphatase, the penultimate enzyme of the histidine biosynthesis pathway. The histidine biosynthesis pathway is a potential target for development of herbicides, and IGPD is a target for the triazole phosphonate herbicides.	8.84274e-88
NZ_CP023415.1\|WP_072311226.1\|748534_749806_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	4.49877e-36
NZ_CP023415.1\|WP_083577858.1\|737348_738389_+\|molybdopterin-binding-protein	gnl\|CDD\|239599	cd03522, MoeA_like, MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.	4.92416e-138
NZ_CP023415.1\|WP_012625432.1\|752492_753245_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	9.53031e-120
NZ_CP023415.1\|WP_012625444.1\|738531_741255_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|376913	pfam02738, Ald_Xan_dh_C2, Molybdopterin-binding domain of aldehyde dehydrogenase.	3.31116e-174
NZ_CP023415.1\|WP_072311229.1\|751678_752113_-\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	5.58965e-20
NZ_CP023415.1\|WP_012625446.1\|736661_737045_-\|hypothetical-protein	gnl\|CDD\|374648	pfam16587, DUF5061, 17 kDa common-antigen outer membrane protein. This is a bacterial domain of 17 kDa common-antigen proteins.	3.58676e-40
NZ_CP023415.1\|WP_072311224.1\|744119_745067_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.32769e-19
NZ_CP023415.1\|WP_012625434.1\|751340_751679_-\|multidrug-transporter	gnl\|CDD\|182618	PRK10650, PRK10650, multidrug/spermidine efflux SMR transporter subunit MdtI.	2.59267e-23

>NZ_CP023415.1|WP_012625440.1|745063_745528_+|oxidoreductase
MNPMMMELLPLVHEGYCCSQLLVLLMLQVRDEENPGLVRAVHGLCHGIGQSDGPCGLLTGGACALALSAGKGAAHETPHPMLAPLLNDYATWFYERTGPYGGQSCGQVAAGLGALSGVAGEMPNPVACGDLLADCWGKIMELVQSYDLDITPAS
>NZ_CP023415.1|WP_072311224.1|744119_745067_+|class-I-SAM-dependent-methyltransferase
MRALWESENFRRATGHAWRPGGLDLTARGLILCRELCGLSPGHLVLDLGCGPGGTVRLLQQSGYDVLGLDRQVNHAAACKNALAQASENGQDGWRFAQADIARLPLADACVQGLVCECVLSLLPDPVQALHGCLRVLRPGGVLLFSDLTRRDEGACVASVEEPAAAARCARGAFLSGPGGSGKVSVSPGMPASSGVSGSSVSCDAYGAYGKSCMDGARSVLLWNAYLGEAGFHVVRYEDHSRALVELAARMLWYGGDEAACMPDSGIGAGGADDVSSASFPRSAASVSSAGCACSFSGNGRKFGYGLWIAQKEQA
>NZ_CP023415.1|WP_012625442.1|743907_744123_+|hypothetical-protein
MSMGPSYGPDGGQWVCGRCRVPLEQGKVPVFYLNSAFDVFLPRCPQCGLTLVPKSLAEGKMAEVEALLEDK
>NZ_CP023415.1|WP_072311223.1|741502_743911_+|hypothetical-protein
MMDQKRLHEIEARCTQESPARCRAACPFDLDVRLFMARMAEGKTGEARKLLERHLPLPGIMARICDAPCENVCLRRDLGGSVAMHGLELACMLAAGPQSRPLPLPPKRFHMAVVGAGLAGLAAAWDLSGKAYPVTIFHAGTPGQALAEAYPALYGKGGAACAKDFLVEDMEMLARRKVQFIPAELDQALLAKAAAEYEGVLVDAGAVPHLAPPCEGLDADILHWRDNICCAGWPDVTPTGHCFFSSSQQAGQGRRAAQTLERVVAGLSLTAARDKTQGPLHTDVSGIAPVPRVEPAGAVYAAEEAVAEATRCLQCQCMICVRECVYLQKYKGYPRVYARQVHNNASIVKGLHTANALINGCTLCGQCEELCPENFSMAELCLSARQDMVENGYMPPSAHEFALEDMENASGPECSLVLPDASLPPGVAPAWLFFPGCQLAASRGEQVARVYALLREKMAASVTPGVALMLSCCGIPAQWAGRAALFAEHVDKLRAAWESLGKPRIMAACSSCLAALRQALPEAGALSLWEVLDGMGLPEGPPAASAALPEVFSIHDPCTARYDGAWLAAVRRLATRAGARVEEPRITGAATACCGYGGLVWCAQPGPAAEMAAHRAAELPHAGLASCIMCRDRLAAGGKECWHLLDLLVPGSTGGDGEKKGPGLSARRANRAALRRHLLREWQGQGEPEPDKGRVLVTDEMLARLEERHILLEDVEAAVAGAEAAGHRFENLENGHVLGSWRPRQVTFWVEYQPHGDGFILHDAWCHRMVVPGSGGQEAADVINSHQCCTDGRRGGQNGGQS
>NZ_CP023415.1|WP_012625444.1|738531_741255_+|molybdopterin-dependent-oxidoreductase
METKTLIVNGMARRLLVSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIGAPDCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDENVAPSREDVRDWFQKHHNICRCTGYKPLVDAVMDAAAILRGEKTVEEISFKMPADGRIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKFDLELLPEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTAPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPTMEALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTPSGQIPEVMSLPEMFDKMRPYYEESKKRVKERSTAEIKRGVGVALGVYGAGLDGPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFFTPAEMKAEGRPMRYDGKWTAPAKDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATVEKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYEDLKKHSTMGGAGIPSIKMIPDDIEIVYVETPRKDGPFGASGVGEMPLTAPHAAIINGIYNACGARVRHLPARPEKVLEAMPR
>NZ_CP023415.1|WP_083577858.1|737348_738389_+|molybdopterin-binding-protein
MAELCMKVIHVHDAVGSVLCHDITRIVPGESKGPVFRKGHIVRPEDIKVLLETGKEHLYVFEPLAGMVHENDAAARIVAAVVGSNLVPGDPKEGRIDLVAACDGLLRVDVPALNRINGLGEITMATLHGMQFVTKGRAVAGTRVVPLMIGEDKLRCLEAAVSRPVIEVLPLARARVGVVTTGSEVYYGRIRDAFGPVLRKKFAALGSSVMGQTLTSDEVSMTASAIADFLHQGADMIVVTGGMSVDPDDRTPAAICASGAQILCYGAPVYPGAMFLLAYAEGPGGRVPVLGLPGCVMYHKASIFDLIVPRLLAGVEVTAEDVAALGHGGFCAGCPECAYPVCPFGK
>NZ_CP023415.1|WP_012625446.1|736661_737045_-|hypothetical-protein
MNTAFCPARASRISRLAALAAALLLVLPLAACGLGEAPQREETPPGPVESFMIISTPGQTTVLDDVQFGQGVNVSVDEVFTSAKGENCKRGTVLAGQKEAEVVVICQDDQGRWTMAPRVWGQGISKP
>NZ_CP023415.1|WP_072311222.1|735026_736577_-|capreomycidine-hydroxylase
MLQQKYLLAVLALLALCGSARAADTVQPYAANLFQGNFAQNKEGAVIAPGDRVVVRLWGGDLNVDRTLAVGPDGHMNLPEVGDMPVAGLAYDKLADALRSKLAANGHADVQIYAAPLDARPVSVFVTGGVSRPGRYTGGPSDPLLSFLDKAGGLDPVRGSYRDIRLMRDGTTVTSLDLYPFARKGVLPAVRVQEGDTLVVGEKGPTITATGAVRNPALFEFPKGQATGTALMDLADPEGRASHIALNGTRNGAPYSTYLPLKDLRALQLEDGDKVQFIADAPGNTIMIEVQGAVRGASRFPVRQGARLRDVKNFIAVEPERANLEAMYIKRKSVAARQKKAIADSLRRLEETALTASSASTEEAQIRAKEAEMVSKFVERAKAVEPEGVVVLDGGPDKADLSLEEGDVIVIPTKSDVVLVSGEVMVPQAMLWGKKKDADDYIKGAGGLTSRADSGKILVMHQNGSVTQGGGDISPGDQILVLPKVESKSMQAVKDISQVLMQVAVSARVLLGLPTL
>NZ_CP023415.1|WP_012625448.1|734185_734875_-|Crp/Fnr-family-transcriptional-regulator
MNQALKSCDLFAHMSPDEAKLCLGCSGAVEEKYGKGGMVFCETDAPTRLFVLLEGAVSVGRDSADGRRAVMARIDRPGDLFGEVYVFLDQASYGCSVQAESPVRVLAIPAKFFYSTCEKRCSMHAQIIRNMLSVFARKAFFLTRRVSLLSSGSLRRKIASLLLEHRNPDGSLNLLMNREQMADFLGVTRPSLSRELAAMRDEGLLHINGKNISLPHPDRLKEFYDYSVP
>NZ_CP023415.1|WP_012625449.1|733778_734120_-|cupin-domain-containing-protein
MQRLLKNLDYATALPLAAQVDCQPGQVASKTLVQNDAVGITLFAFDKGEKISAHTSTGDAFVLALEGQGQVTINGQTSPLKAGESIIMPAGQPHSVSAVERFKMLLVVIFPPE
>NZ_CP023415.1|WP_143142559.1|747587_748538_+|AMP-binding-protein
MSQLVSAGQTLAVLLPGAERPNGVADLLRQALQPCGVQVCCPPQHLLAAVEPAVEMAAHAPQDGEISGESAQGEESSSADGTGQDMGEGAQPHAAGMPGICSPAAAPASVFAARGIRAELAHWLAEAGAHCLVAAPGQLEGLLRYFPSSGPPGLRGLLSSADRLDPVLRHVLASVWNCTVLDHYGLTEVGYGGAVECPAHDGYHLRALDMIVEIVDFCGDEPLPHGEAGEVVITTLEREAMPLVRYRTGDVASLLAGPCACGSPLPRLGPVRGRLERCGGRVRVVSLQKGGRNPASGPVRQPDTADAPHCLLGDWA
>NZ_CP023415.1|WP_072311226.1|748534_749806_+|nucleotidyltransferase-family-protein
MNGHALILAAGQASRMGRCKALLPLALGPGGGDCTALEGLVRLFHVSGIAQVTVVTGFHAEYVEAAARGLGLAVARNPRPEDGMFSSVCAGLRALCGRNGASGSFAMEGPVLVQPVDVPLVRPMTLQALLETHATDQESVLVPAFAGEEGHPPLLPGRCLRQVLGHGHAGGKGGLRGALAGLPVRLVAVADSLVLPDMDRPEDYESLRLLAPHRNALWPCEAVELLRLHKVPEKGVRHGKAVGAVAAALTKALAQARQMGQTPEACRSGQALLNSGLALAGGLLHDICKGEKGHESAAGRLLRCLQLPVMARLVEDHRDLDLPDDLPITERELVFLADKYCYGASFVPVQRRFEQKLEIFGADPAAATAIRGRLGRALALEERLARELVCDQAYGKTHCRSLPADVARAALERLASEKNVAAG
>NZ_CP023415.1|WP_072311227.1|749983_750565_+|histidine-phosphatase-family-protein
MNGMWLVRHGALPPNPERRIVGNRDIPLSDAGRNQIRRLARDFMPALAGRLAAVVSSDLGRCRETTSILLTGNEWAASPPPVHAEPGLREIDMGQWQGLTRNEIEQRFPGQYAVRGKDFARFRPEGGESFACLQERALEAVQRWRRQYPDGLVLVVAHAGVIRCLLAHYMALPLEEALNIPQEYGCQTFVPEW
>NZ_CP023415.1|WP_072311228.1|750640_751192_-|hypothetical-protein
MKKGFWNYLEKWRGLFPRRRVLRWRGGWLQNGYCRDCRYCCGPQDSSEPFPMALLPRQLHEGMEEDFYMLDGHTAYMDGRGCKACTRTGCGLPREQRPVACGLFPFVLANGSLYAYKTCPAVLLTPPAELALLGLEAARWLAAFNLEDLRRLSLDIATPVLAEKYISLSIQVFDSEGVNLQLH
>NZ_CP023415.1|WP_012625434.1|751340_751679_-|multidrug-transporter
MQPLTSFFSLSLLLVVMAAALDVLANLLLAKSGGFRRRWLGFFSLVLVGLAFYCLSLAVRHMDLAVAYAMWGSFGILGTSLGGWLFFSQKLRPCAFAGMALLMTGMALLHMS
>NZ_CP023415.1|WP_072311229.1|751678_752113_-|multidrug-efflux-SMR-transporter
MLETKPYHWLCLMGAIIFEVAGTTVMKMAQGWGFAHAAMLGLVLMWLGIALSYYMLAKATTGLPVGVAFAFWEGLGLTFITICSVLLLGESMTVTRGLGLVCVLAGALLVHHGTGHGKEDIHPAARPTSSLNAGGNAAGERGNA
>NZ_CP023415.1|WP_012625432.1|752492_753245_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MIIFPAVDIQNGKAVRLKQGRAHESTVFAESPVDAARAWEEAGARWLHVVDLDGAFDGAAQSRRIVRDICAALAIPVQLGGGIRDMHTAEAYLEAGVSRLIIGTLALEQPTLFADMCRAFPGRVGVSLDAEGGRLKSRGWVEDTGMTVDTALPRLLDDGAAFVIYTDIERDGMQCGVNVAALEHLARLSTVPVIAAGGVATLEDIQKLYPLTLETSLMGAVSGRALYEGTLDLKEANAWIDARKNTPESA
>NZ_CP023415.1|WP_012625431.1|753241_753901_-|hypothetical-protein
MHNRLNILLLVILSLAVVLGACSKRPRSTADVPRNLSSAYTITVVPFTQPVNASQLIMGRIPENQGRIPDDMLTALDMRLRHVLTTQTSRQYKFISQRTLPKNATAFHSSEQPQALPLWVAYGKKQGAQLLLIPQVLDWHEREGSKAGVTQSAHVRVEFFLLRVDAGSIMDRSVFEEQQVGLTENLLNVGSFLKRKGQWVTAEELTVDGISKAVKDLGL
>NZ_CP023415.1|WP_012625430.1|753900_754497_-|imidazoleglycerol-phosphate-dehydratase
MTTAPRTSTQARTSAETDIRLELNLDGQGKTDIRTGFGLLDHMLTLTFFWAGMDLTLVCEGDMQVDAHHTAEDVGMTLGKALLEALGDRAGIARVGYGRVPMDEALAEVTVDLSGRPWLEWRGDELLPPVLAGEEKDLWREYYKALASGARCNLHVDMRYGKNGHHLLESAAKGLGLALAHAVRRHGTTIRSTKGGLD
>NZ_CP023415.1|WP_049757423.1|754493_755291_-|twin-arginine-translocase-subunit-TatC
MGLMDHLGELRMRLVRCCIAVIVGFFACWAVVDPIFDVLVNPLLAVLPKGSHAIYTTLPEGFFTRMHIAFVAGVFVSSPVIFYQIWSFIAPGLYEEEKKYIIPIAIMSALFFICGGAFCYFVVFPYAFSFFVSFATEEIVAMPKVSDYLSFVLKLILAFGIIFEMPLFAFFLARMGVVTAAMMRQARRYAILGIFIVAAILTPPDVVSQLLMACPMLILYEISIWVAAAFGRKPKTEKDADDGGQEKTDADAASDAKTANASEKA

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Crispr_ID: NZ_CP023415_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023415_2

1226924-1228112

TypeI-E

I-E,II-B

Consensus_repeat	Method
GTGTTCCCCACGGGCGTGGGGATGAACC	PILER-CR
GTGTTCCCCACGGGCGTGGGGATGAACCG	CRISPRCasFinder
GTGTTCCCCACGGGCGTGGGGATGAACCG	CRT

19 spacers

cas2,cas1,cas5,cas7,cas6e,cse2gr11,cas8e

The CRISPR arrays of NZ_CP023415_2

>merge|NZ_CP023415|2|1226924-1228112|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCACGGGCGTGGGGATGAACCGGGGTGGGGATCGGCGCGGCCCATGCTGGTGAAGTGTTCCCCACGGGCGTGGGGATGAACCGGGCGCATCCGTCACCGTCTTCGCCATACCAGCGTGTTCCCCACGGGCGTGGGGATGAACCGTTCTGCCTGGGCTTGAGCAACGGCCTTGGGAAGTGTTCCCCACGGGCGTGGGGATGAACCGAACTTCGGAGAACTGGATAGTCTGTTTACCGCGTGTTCCCCACGGGCGTGGGGATGAACCGTCGAGGACCTCCGTGCGCTCCCGCGTGCACACGTGTTCCCCACGGGCGTGGGGATGAACCGTGAGCCATTGGGCGGAAGATATTCATCGGCATGTGTTCCCCACGGGCGTGGGGATGAACCGTGATTGTTGGAAATTCGGAAACATTCAGACCAGTGTTCCCCACGGGCGTGGGGATGAACCGGTCTGGCTTGACGATCTGCTTTATGATCTCGTGTGTTCCCCACGGGCGTGGGGATGAACCGTTTGCGGAATGTTTGCGGTCTGATTCCGAGCAGTGTTCCCCACGGGCGTGGGGATGAACCGGGGCAGTAACAGTAGGGAAAACAGAGACGTTCGTGTTCCCCACGGGCGTGGGGATGAACCGGATCAGGGCCGGGGTCAGCGGGAGGGTCAGGGGTGTTCCCCACGGGCGTGGGGATGAACCGCATGGGAGGAGACGTATCCTGGGAGCGTGTCTGTGTTCCCCACGGGCGTGGGGATGAACCGAGGATGAAGGCCAGCCGCCTTAGCATCGGCAAGTGTTCCCCACGGGCGTGGGGATGAACCGATTTGGATGTCCAGCGTGCGGGTCTTTGACGTGTGTTCCCCACGGGCGTGGGGATGAACCCTAACAACCCTAGCCAAAAAAGGAACTCCAGACGTGTTCCCCACGGGCGTGGGGATGAACCGGCGATGCGGGACAAACCAATGGTGTATTTTTAGTGTTCCCCACGGGCGTGGGGATGAACCGTGGCCATATTTATAACCTCCTATATTGGATTGGTGTTCCCCACGGGCGTGGGGATGAACCTGCATTCGTCGGCAAGCTCGCCGGCGGGTTCTCGTGTTCCCCACGGGCGTGGGGATGAACCGCATGCGGGGCGTCACCTTGCGATGGCTCCTGCCGTGTTCCCCACGGGCGTGGGGATGAACCC

>NZ_CP023415|2|1|1226924-1228111|PILER-CR
GTGTTCCCCACGGGCGTGGGGATGAACC	GGGGTGGGGATCGGCGCGGCCCATGCTGGTGAA
GTGTTCCCCACGGGCGTGGGGATGAACC	GGGCGCATCCGTCACCGTCTTCGCCATACCAGC
GTGTTCCCCACGGGCGTGGGGATGAACC	GTTCTGCCTGGGCTTGAGCAACGGCCTTGGGAA
GTGTTCCCCACGGGCGTGGGGATGAACC	GAACTTCGGAGAACTGGATAGTCTGTTTACCGC
GTGTTCCCCACGGGCGTGGGGATGAACC	GTCGAGGACCTCCGTGCGCTCCCGCGTGCACAC
GTGTTCCCCACGGGCGTGGGGATGAACC	GTGAGCCATTGGGCGGAAGATATTCATCGGCAT
GTGTTCCCCACGGGCGTGGGGATGAACC	GTGATTGTTGGAAATTCGGAAACATTCAGACCA
GTGTTCCCCACGGGCGTGGGGATGAACC	GGTCTGGCTTGACGATCTGCTTTATGATCTCGT
GTGTTCCCCACGGGCGTGGGGATGAACC	GTTTGCGGAATGTTTGCGGTCTGATTCCGAGCA
GTGTTCCCCACGGGCGTGGGGATGAACC	GGGGCAGTAACAGTAGGGAAAACAGAGACGTTC
GTGTTCCCCACGGGCGTGGGGATGAACC	GGATCAGGGCCGGGGTCAGCGGGAGGGTCAGGG
GTGTTCCCCACGGGCGTGGGGATGAACC	GCATGGGAGGAGACGTATCCTGGGAGCGTGTCT
GTGTTCCCCACGGGCGTGGGGATGAACC	GAGGATGAAGGCCAGCCGCCTTAGCATCGGCAA
GTGTTCCCCACGGGCGTGGGGATGAACC	GATTTGGATGTCCAGCGTGCGGGTCTTTGACGT
GTGTTCCCCACGGGCGTGGGGATGAACC	CTAACAACCCTAGCCAAAAAAGGAACTCCAGAC
GTGTTCCCCACGGGCGTGGGGATGAACC	GGCGATGCGGGACAAACCAATGGTGTATTTTTA
GTGTTCCCCACGGGCGTGGGGATGAACC	GTGGCCATATTTATAACCTCCTATATTGGATTG
GTGTTCCCCACGGGCGTGGGGATGAACC	TGCATTCGTCGGCAAGCTCGCCGGCGGGTTCTC
GTGTTCCCCACGGGCGTGGGGATGAACC	GCATGCGGGGCGTCACCTTGCGATGGCTCCTGCC
GTGTTCCCCACGGGCGTGGGGATGAACC

>NZ_CP023415|2|2|1226924-1228112|CRISPRCasFinder
GTGTTCCCCACGGGCGTGGGGATGAACCG	GGGTGGGGATCGGCGCGGCCCATGCTGGTGAA
GTGTTCCCCACGGGCGTGGGGATGAACCG	GGCGCATCCGTCACCGTCTTCGCCATACCAGC
GTGTTCCCCACGGGCGTGGGGATGAACCG	TTCTGCCTGGGCTTGAGCAACGGCCTTGGGAA
GTGTTCCCCACGGGCGTGGGGATGAACCG	AACTTCGGAGAACTGGATAGTCTGTTTACCGC
GTGTTCCCCACGGGCGTGGGGATGAACCG	TCGAGGACCTCCGTGCGCTCCCGCGTGCACAC
GTGTTCCCCACGGGCGTGGGGATGAACCG	TGAGCCATTGGGCGGAAGATATTCATCGGCAT
GTGTTCCCCACGGGCGTGGGGATGAACCG	TGATTGTTGGAAATTCGGAAACATTCAGACCA
GTGTTCCCCACGGGCGTGGGGATGAACCG	GTCTGGCTTGACGATCTGCTTTATGATCTCGT
GTGTTCCCCACGGGCGTGGGGATGAACCG	TTTGCGGAATGTTTGCGGTCTGATTCCGAGCA
GTGTTCCCCACGGGCGTGGGGATGAACCG	GGGCAGTAACAGTAGGGAAAACAGAGACGTTC
GTGTTCCCCACGGGCGTGGGGATGAACCG	GATCAGGGCCGGGGTCAGCGGGAGGGTCAGGG
GTGTTCCCCACGGGCGTGGGGATGAACCG	CATGGGAGGAGACGTATCCTGGGAGCGTGTCT
GTGTTCCCCACGGGCGTGGGGATGAACCG	AGGATGAAGGCCAGCCGCCTTAGCATCGGCAA
GTGTTCCCCACGGGCGTGGGGATGAACCG	ATTTGGATGTCCAGCGTGCGGGTCTTTGACGT
GTGTTCCCCACGGGCGTGGGGATGAACCC	TAACAACCCTAGCCAAAAAAGGAACTCCAGAC
GTGTTCCCCACGGGCGTGGGGATGAACCG	GCGATGCGGGACAAACCAATGGTGTATTTTTA
GTGTTCCCCACGGGCGTGGGGATGAACCG	TGGCCATATTTATAACCTCCTATATTGGATTG
GTGTTCCCCACGGGCGTGGGGATGAACCT	GCATTCGTCGGCAAGCTCGCCGGCGGGTTCTC
GTGTTCCCCACGGGCGTGGGGATGAACCG	CATGCGGGGCGTCACCTTGCGATGGCTCCTGCC
GTGTTCCCCACGGGCGTGGGGATGAACCC

>NZ_CP023415|2|1|1226924-1228112|CRT
GTGTTCCCCACGGGCGTGGGGATGAACCG	GGGTGGGGATCGGCGCGGCCCATGCTGGTGAA
GTGTTCCCCACGGGCGTGGGGATGAACCG	GGCGCATCCGTCACCGTCTTCGCCATACCAGC
GTGTTCCCCACGGGCGTGGGGATGAACCG	TTCTGCCTGGGCTTGAGCAACGGCCTTGGGAA
GTGTTCCCCACGGGCGTGGGGATGAACCG	AACTTCGGAGAACTGGATAGTCTGTTTACCGC
GTGTTCCCCACGGGCGTGGGGATGAACCG	TCGAGGACCTCCGTGCGCTCCCGCGTGCACAC
GTGTTCCCCACGGGCGTGGGGATGAACCG	TGAGCCATTGGGCGGAAGATATTCATCGGCAT
GTGTTCCCCACGGGCGTGGGGATGAACCG	TGATTGTTGGAAATTCGGAAACATTCAGACCA
GTGTTCCCCACGGGCGTGGGGATGAACCG	GTCTGGCTTGACGATCTGCTTTATGATCTCGT
GTGTTCCCCACGGGCGTGGGGATGAACCG	TTTGCGGAATGTTTGCGGTCTGATTCCGAGCA
GTGTTCCCCACGGGCGTGGGGATGAACCG	GGGCAGTAACAGTAGGGAAAACAGAGACGTTC
GTGTTCCCCACGGGCGTGGGGATGAACCG	GATCAGGGCCGGGGTCAGCGGGAGGGTCAGGG
GTGTTCCCCACGGGCGTGGGGATGAACCG	CATGGGAGGAGACGTATCCTGGGAGCGTGTCT
GTGTTCCCCACGGGCGTGGGGATGAACCG	AGGATGAAGGCCAGCCGCCTTAGCATCGGCAA
GTGTTCCCCACGGGCGTGGGGATGAACCG	ATTTGGATGTCCAGCGTGCGGGTCTTTGACGT
GTGTTCCCCACGGGCGTGGGGATGAACCC	TAACAACCCTAGCCAAAAAAGGAACTCCAGAC
GTGTTCCCCACGGGCGTGGGGATGAACCG	GCGATGCGGGACAAACCAATGGTGTATTTTTA
GTGTTCCCCACGGGCGTGGGGATGAACCG	TGGCCATATTTATAACCTCCTATATTGGATTG
GTGTTCCCCACGGGCGTGGGGATGAACCT	GCATTCGTCGGCAAGCTCGCCGGCGGGTTCTC
GTGTTCCCCACGGGCGTGGGGATGAACCG	CATGCGGGGCGTCACCTTGCGATGGCTCCTGCC
GTGTTCCCCACGGGCGTGGGGATGAACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023415.1\|WP_072312260.1\|1244611_1246030_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP023415.1\|WP_072312529.1\|1223905_1224958_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP023415.1\|WP_096152644.1\|1218974_1219745_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP023415.1\|WP_012624559.1\|1224947_1225697_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP023415.1\|WP_072312265.1\|1239499_1240837_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|99747
NZ_CP023415.1\|WP_072312258.1\|1247018_1248137_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP023415.1\|WP_072312527.1\|1221087_1222710_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP023415.1\|WP_072312531.1\|1226566_1226881_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP023415.1\|WP_096152604.1\|1219686_1220922_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP023415.1\|WP_096152809.1\|1243559_1244603_+\|chain-length-determining-protein	unknown	unknown	gnl\|CDD\|130083
NZ_CP023415.1\|WP_143142653.1\|1232027_1239503_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225858
NZ_CP023415.1\|WP_072312259.1\|1246031_1247006_+\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
NZ_CP023415.1\|WP_096152646.1\|1249418_1250339_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023415.1\|WP_072312544.1\|1218412_1218832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023415.1\|WP_072312528.1\|1223254_1223875_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|378050
NZ_CP023415.1\|WP_072312530.1\|1225680_1226592_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP023415.1\|WP_072312257.1\|1248144_1249401_+\|UDP-N-acetyl-D-mannosamine-dehydrogenase	unknown	unknown	gnl\|CDD\|182940
NZ_CP023415.1\|WP_012624556.1\|1222706_1223258_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP023415.1\|WP_083577952.1\|1230132_1231167_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271177
NZ_CP023415.1\|WP_096152645.1\|1228960_1229929_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382

Protein	Function_ID	Function_description	E-value
NZ_CP023415.1\|WP_072312260.1\|1244611_1246030_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	4.23904e-07
NZ_CP023415.1\|WP_072312529.1\|1223905_1224958_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.61113e-122
NZ_CP023415.1\|WP_096152644.1\|1218974_1219745_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.61331e-44
NZ_CP023415.1\|WP_012624559.1\|1224947_1225697_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.558e-30
NZ_CP023415.1\|WP_072312265.1\|1239499_1240837_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|99747	cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.	5.534e-156
NZ_CP023415.1\|WP_072312258.1\|1247018_1248137_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP023415.1\|WP_072312527.1\|1221087_1222710_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	9.87937e-86
NZ_CP023415.1\|WP_072312531.1\|1226566_1226881_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	7.65697e-45
NZ_CP023415.1\|WP_096152604.1\|1219686_1220922_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	5.39526e-90
NZ_CP023415.1\|WP_096152809.1\|1243559_1244603_+\|chain-length-determining-protein	gnl\|CDD\|130083	TIGR01010, BexC_CtrB_KpsE, polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family. This family contains gamma proteobacterial proteins involved in capsule polysaccharide export. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	7.78695e-71
NZ_CP023415.1\|WP_143142653.1\|1232027_1239503_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP023415.1\|WP_072312259.1\|1246031_1247006_+\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	4.29855e-20
NZ_CP023415.1\|WP_072312257.1\|1248144_1249401_+\|UDP-N-acetyl-D-mannosamine-dehydrogenase	gnl\|CDD\|182940	PRK11064, wecC, UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional.	0
NZ_CP023415.1\|WP_072312528.1\|1223254_1223875_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.65243e-56
NZ_CP023415.1\|WP_072312530.1\|1225680_1226592_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.4428e-141
NZ_CP023415.1\|WP_012624556.1\|1222706_1223258_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	2.37967e-29
NZ_CP023415.1\|WP_083577952.1\|1230132_1231167_+\|site-specific-integrase	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.22944e-49
NZ_CP023415.1\|WP_096152645.1\|1228960_1229929_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.56088e-93

>NZ_CP023415.1|WP_072312531.1|1226566_1226881_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MVMLVIVTEAVPQRLRGYLSRWLLEVRAGVYVGNYSVRVRQKLWEVVCQQVGDGNAVLAWTSCHESGFQFLTVGANCREQIDWDGLPLVAYTPRDNDRDDLVDL
>NZ_CP023415.1|WP_072312530.1|1225680_1226592_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MRLMSETVPLKERNSMLFLKYGRIDVEDGAFVLVDATGVRMQIPVGGVACLFLEPGTTVTHAALALAADCGTLMVWVGEGGVRLYSAGQPGGARADRLLYQARLALDDELRLRVVRAMYRMRFNEEPPQRRSIEQLRGIEGARVRALYKFLAAQYKVTWGKRSYDPREWDATDVVNKAVSVACHCLYGICEAAVLAAGYAPAIGFIHSGKPLSFVYDVADLFKFETAIPAALSVVAKKPGKVESEVRLRCRDLFRETRLLQKIIPAIEEVLSAGGIAKPERPPEAVPIAIPNKKGLGDAGHRN
>NZ_CP023415.1|WP_012624559.1|1224947_1225697_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MCADVCCLALRLQAPMLSFGNESRFNRRCTASLPSKSVVAGMLCAAKGLHRGSVEEQAFLQQVAAIPMLSVAIPRCLSANGKDWLLAAGRTVDFHTVQGTRKAAGGIKDCHITTRHYLHDSSFAVFLNGPYRVLEDAARALQNPVWGLWIGRKCCIPSAPVFGGLFSSEAVALNHMLDAPLEFFTHEREVHSFEDGNDTVPDQAESFLSAARRFAPRRVLRVRARVHGVQREDVEEKQQQAVMTDAPDV
>NZ_CP023415.1|WP_072312529.1|1223905_1224958_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MRHLELHILQSVPVACLNRDDLGSPKTAVFGGVQRARVSSQCWKRAIREYCGELLPQHFKGERTRLIVEPLRDIFINTYGLDEATALVKANDLAEGLAKLDKDAAKKNKLQTKTLFFTSRSELEALAAIAVNNENIKKHAKTFAQSLCTDAADIALFGRMVASAPELTLEGAAMFSHALSTHKADNEIDFFSALDDLQPSEETGAGMTGTLEFNAAAYYRFCALNLDMLADADHLGALSPDERQGIVAAFVEATLKAMPVARKNSMNANTMPAYVLCVLRDSGQPVQLVNAFEKAVYSPDGRGYVEASIKRMEEEYQRLENTWGLTAVETIRMPLQSLGELLQGVRRHVR
>NZ_CP023415.1|WP_072312528.1|1223254_1223875_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTWMTRFMVELPALHRNRLSDCYAWHKAIWQCFPNRPDASRDFLFRLDEVPAGTLVHVLSPHEPQRPDFCTEDHWQIKAVPPCFLKYNCYRFDVICNPGRKVEAFTSDGQRKKNSRREAIIKPDEQNAWLDRKAAANGFEVLPGMRIDPSTRYSFRKDHRSGTHIGVRFSGVLRVTQRDEFCRAFHKGLGSARGFGFGMLLLSPVR
>NZ_CP023415.1|WP_012624556.1|1222706_1223258_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTALVQWLRTQKERRGVLAQLRCGIVPGKQQRAWPLLAPFDGIEGYKGEVVRTVAALYAAHPEESASGSMGSVCRKLCSDDERRDDEKPGAIGMRFQHLLAAETAEVCPRVVRLILRARAQGIPVNYVQLQEDLLQWAVPHKRRYVQERWAQQFWAPAAQPAGLDNTSGQQPDTPQDTPETMP
>NZ_CP023415.1|WP_072312527.1|1221087_1222710_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLVSDQWIPVLDNSGQHQLVNLREALCEGAQWRDLAVRPHERVALMRLLLCIAHAALNGPSREDWSRVPQLLPDAVAAYLQKWQDSFDLFHPQKPFLQISGLKAASKKTKRTEDDEGPLVKASKLDFTLATGNQSTHFDHEGSLAQRSAEQALPALNLLSYLCFSPGGLIGTVVWNNHVTARSSSDGPCAVGSMTHTFWRGANVLQTLHLNMCARDDIERRLASIPEAGWGKPVWEQMPVSFDDANAWRNATHTYLGRLTPLSRLVLFQRGASGMTLGAGPVFPNFNNAKAPYVEEPTSTIILRGKDNKQTRALLPVTPGKALWRELHALVAHRNKDDVGGFWAAALASAEGASGRDMVVAGMARDQAEVVDTLESVYHIPQAMQKTPGQLVYGQGVQYAEDMSRKLGWAVDTYREKVDGGWAGRLKGAGAGKVELLIKLRQKAFTLYWTAAEQSLPLLFACVESLGSDAFPVAQKAWQKALFVAARKAYSSICAPQTPRQHRAFALGLARLCKPVATAASPNMASEISSDTFHEEDDE
>NZ_CP023415.1|WP_096152604.1|1219686_1220922_-|ISL3-family-transposase
MKDTDLYFRILGLTEPWFVEAVELDTAEGRVDIRVEHGPGVRWFCPTCGRELACRDHAEPRVWRHLDTCQFKTFLHARIPRVDCPEHGVLQVNVPWAESKARFTILMERLIIDVLTECATVTGARRILRITWDEAWGVMERAVRRGRERKQSNPSRYLGVDEKAFRKGHDYVTVVCDLIGSTVEYVADERKAESLEGYYLQFTKAQLERIKAVAMDMWEPYFKATLKHVPDAAGKIVHDRFHVMKHVGEAVDRVRKQEHRELTSQDDHRLKGTKFLWLYREENLPDKHRPALEALKTANLKVAKAWAMKESLNDVWKYLSTGWARRFVKRWLVWVNRSDLAPMRKVGGLIQRHLENILTFCRHRITNGVAEGLNSKIMAIKRKACGYRNREHFKTAIYFFCGGLNLYPASS
>NZ_CP023415.1|WP_096152644.1|1218974_1219745_+|IS30-family-transposase
MGYAHLAREERYYICQAVKSGTSLRAIAKAIGRSVSTVSRELARNTGARGYRYRQAHKRSQKRQTSKGKKRIGLEVWTYVEQCLHQDFSPEQISGVLKRKGFALSHEWIYQYILADKRRGGTLHSHLRCQRKCKRRYGKPDRRGQIKGRISIDTRPPIVDERSRLGDWEADTVEGSKGGPVLVTLAERKSRLFLFGKAPNKSASEVRRVIEGLLTPIKDFVQTITYEVLPGFPWVTPVRNWPGRGLDRHRRSRWLS
>NZ_CP023415.1|WP_072312544.1|1218412_1218832_-|hypothetical-protein
MLKKITFLLIIFMAALHMEWGKDLGIGHAHAFGVLHEHNRHSADRFLPVQSLQAPLQNEHGLPAEAGPAPYEYPRLGAILPERIKHDANHSSQPDQLISYFLQTIPYTNPGSPAPANSLHLPDKRKFQESPPPVRAPTA
>NZ_CP023415.1|WP_096152645.1|1228960_1229929_-|IS30-family-transposase
MGYAHLAREERYYICQAVKSGTSLRAIAKAIGRSVSTVSRELARNTGARGYRYRQAHKRSQKRQTSKGKKRIGLEVWTYVEQCLHQDFSPEQISGVLKRKGFALSHEWIYQYILADKRRGGTLHSHLRCQRKRKRRYGKPDRRGQIKGRISIDTRPPIVDERSRLGDWEADTVEGSKGGPVLVTLAERKSRLFLFGKAPNKSASEVRRVIEGLLTPIKDFVQTITYDNGKEFSYHADVSATLEAQGFFAHPYHSWERGLNENSNGLLRQYFPKGVSLASVTQDEIIAAMCRLNWRPRKCLGFKTPYEVFLEDANTQGLGVAL
>NZ_CP023415.1|WP_083577952.1|1230132_1231167_+|site-specific-integrase
MIRHSPSIISASPSSRLRGRHSNRNAVNFDTFVSDVYLPHVQLHKRSWNVDERIARQHLSPIFGDRRLDGIERCEVEKWRHGLLMRGLAPSTCNRILSVFKSIFSLAGMYGLLPVGQSPCVGVLPLKVHTMRERYLTPSEARRLMRELEQSTRPEAAAIRLLLLTGARKSEILKAKWEYVRSDLRLLIVPLSKSGKPRHIPLSDEAIAVIGSLPRRSGCPWLFPGHGAGVKPLSDIYIFWNKLRHILGFADVRVHDLRHTFASFLVNAGHSLYEVQKLLGHSDPRTTMRYSHLGQASLVAAAETVSGYLSRFRSKSTENVPFHRLNPNKGYSKQIGRVHSQHCE
>NZ_CP023415.1|WP_143142653.1|1232027_1239503_+|SDR-family-NAD(P)-dependent-oxidoreductase
MMDRPQSPVAIVGMGFRFPGNIYDALGMWNMLSHGRCCITKIPANRWPVNELEHSNRSEPGRSVTFAAGVLSDIDKFDAAFFGISPREAAWLDPQQRLLLEMAYEAMEDSGIRPSSLAGSSCGVYIGISGLDYGQHALEDMASMSAYVMTGNTLSVAANRLSYFFDLHGPSMSVDTACSSSLVALHHACQAVSGGEVPMALAGGVGLLMHPYSFVGFSKANMLSARGHCRPFDASADGYVRAEGGAVLLLKPLHKALEDGDPIHATIVASGVNADGGRKSGLTIPSVAAQAELMRHVLLKSQLRPEDVDFIEAHGTGTPAGDPVEVASIGQAYGDGRGRPVPISSVKANVGHLEPASGMAGLVKAVLALKNKFLPPMSLDFTPNPAIDFKEANVECAACGISLLRKDEKPLTAGVNSFGFGGVNAHVILQAAPLRAASPAKLAATLPPLLLSARSEDALCAMAANYADHIERAGLPGYYDIAYGAAFHRDRMEKRLALFRENFDEIVPALRSWAAGDRSAHILREDTIGKEGGIVFVYTGNGAQWHGMGRTLYIESADFAAIMSSLDKDMRPLLGFSLLDVLQGEDPEILQDTTVSQPLLFSIQVGVTNLLRKWGIAPQAAMGHSVGEITAAWATGALSLQQAIQVICARSHAQGKTRGSGRMAAVGMSAGAAHELIQEMGLAAEVEIAGINSPNNITLSGKLDALLQIQAHLQLENTFFHLLELDYAFHSRSMDSIKDVLAQKLEGFCPSPTSAVLASTVTGRKIEGSALGSEYWWNNVRQAVRFSDAVQELASLGFRIFVEVGPHAILQRYLRETLSASGIKGRIFSTLLRGDDGKERIARLAMRLHLFSDETNLRAFFPYEGERVRLPLYPWQKTRCWFPRTSECALDKRRTHPLLGWPLEGVDLIWENILDPDKDIWLADHNVGGAVVFPGAGYVEMALACAHAWSGNEHVVLESLDIAIPLVFEGGNAQCVRCSLHTADGTFRIVSRPRLGTGDWVQHASGRILSATGRTPDLDMRALPQGCQEMNGAALYALAEALGLEYGPAFQVVQNVRAHNDRFDVDLIPVAADAQDYLLHPVVLDACFHSLVSLQAHDDASLQVAYLPVKMGRFDRCAPGVVTRIKARVHHWGRRSLGADFELWDEAAGRLVACVSDCRFRSMPLSHAMRQSVEEWSILPWLHPLACEEKVRTTPSLDSLMALLAPTSDAFEASRESWFKHVLPLMEAMTLAFAWQAFRSLAADDPHWAQKISGAYAQWLMCLLRDEGLLEQRNGEWLLASESGIPPVESLWQDALRHDSRSLPSLLALGRTGLHLENVLSGQMDGGALREEIYTASVARAFNHADPANLGMERALNAVVQHLAETWSGPTRLRILEIGAAPGNLTKLLDAKLPEDRFEHVLALCNSEATHQARARYEKHPSVTVVSCDAVQLSFDDEKIFQRSFDVIVLRHALHKADNLRGALSKIRGLLSSNGLLLAVERHPDWSTDFLEGLDSAWWQVNPAEPENPLSSLLVPEAWQQAFEEHGFSSCRIYKESAAEGLAEGAYLLLAAGPDEQCEIVDIPEKKEWLLLGDAASEHLAESLCARLQAKGQQVVCTCHENPQAVGNADHVVFLRGGHATPQEVTPTLDDLLYYVRQCVEHDAAPRLWIVTRGGALDSGLPEGCEVRPAQCALWGLGRVVASEYDQLHCTLVDAPYLLNDEDAARLLEQEFLYSDDTDEVLLTPRGRYALRLKKGGAAAAASITPMDRCRLDFMRPGKLGNLTWYADNKRVLAPDEVEARVMATGLNFRDVMLTMGLLPDEAVENGFAGPSLGLEFAGVVTRVGHAVEDLQPGDTVVGFAPACFASHVVTPKHAVVRIPETWNYEAAATIPTVFFTAWYALNYLARLQPHETVLIHGAAGGVGIAAIQIAHHLGAKVFATAGSEEKRDFLRLMGVEHVFDSRSLSFADDVLAATGGAGVDVALNSLAGEAMRRSLGVLKPFGRFLELGKRDFVENTSLGLRPFKENISYFAIDADQLLTARPALAAKLFQEVMRLLEEEVLAPLPYRIFPATDVVAAFRTMQQAQHIGKIVVSLADLPPVPHVGESPATLDLSGAGTWLVTGGLSGFGLATADHLAKRGVRHLVLVGRRGATTPEAVQALESLADQGVNARAEACDVSDAAAVRALVERVAATMPPLTGVVHAAAVFDDRFLAQMDKQSLDAVLSPKLYGAWHLHEATLGLSLTHFVLYSSISTALGNPGQGNYVAANAGLEGLARLRVSMGLPAACIAWGPVGDVGYLTRNDAVKKTLAQRLGKAPMSSSEAMEQFDAALAAGGLHILANVDWGAVLGMFPRAASRFDLIGRHAVSQRGPETSLDIHQLLDGKSPEQVLEIIRGLIAEEVAQVLALGVGQVAMDRSLQSMGLDSLMAVELAISLEQRVGVRLPAMMFQDSPTVEQVAERIVARLNGAASDEDSQATLALSEMARRHAEDISESELRNMVGHVAPEGEKA
>NZ_CP023415.1|WP_072312265.1|1239499_1240837_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSLNPTLQIINHMLGRKSHKATPFEASRQASAQRITKASDSRASFGNHPALTNLRMLTTAAERFGIGNPFFKLHEGVGGHHTNIGGKQYLNFSHYSYLGLNGHPEVNEAAQKAIDSYGTSAGASRLVAGERPVQRQLEEALAAVYGVEDCLAFVSGHATNVSTISTLFGHNDLIIHDSLIHNSVLEGIRLSGATRRPFPHNDLKALENLLASLRSRFERVCIIVEGVYSMDGDMPDLPALVRIKLKYDAFLMVDEAHSLGVLGATGKGLAEYWGLPGTDVDIWMGTLSKTLAGCGGYIAGSRDMVEILKFSAPGFVYSVGLSPPLAAASLEALRIMQREPDRVRCLHDRSSLFLGLARESGLDVGTSQGFSIVPVILGSSRKAVALSNQLFEHGINVQPIIHPAVEEKAARLRFFLSAMHTEEEIRRTCQTMALLAHGKDVSHAL
>NZ_CP023415.1|WP_096152809.1|1243559_1244603_+|chain-length-determining-protein
MGALSSVYWIFSSDRYVSESIVLIQNTEQIGVPSFDITTVLGGIGSISKPDQLLLREHLLSVDMLKKLDAALNLRAHYSDRRHDFGSRMWFKDASIEWFHRHYLSRVTVDFDDYAGVLRIRVQAYDAAMAQAIALMLVKEGERYMNEMSHALARAQVEFLDTQVASAHEQLLKASQILLDFQNQKGLVSPKATVGSIYSIIGKLEGQRTELQTQLASLPRNLDRNHPTRKSLEQSLLAVERQIAQEHAKLASTSGMPLNSLVEEEQRLEMDLEFKKAVYKTALAGLEKGRMDAARTLKQVSVLQMPVLSEYAMEPRRIYGVVATVCITVLLIGIMNLLKSVILDHVD
>NZ_CP023415.1|WP_072312260.1|1244611_1246030_+|hypothetical-protein
MAGQEILHEAVNQDVRVKELTEENELLFEQLHVVQEELEKYYHKLKECEQQRGSATSYALCNSRLPEVLAENQKLRVLADWQQRVLHVETQNSLPSRLGDILIKGVSSTGAFLALPGKLRKMWKALDQTTPPSELGGKSFPKVIDVYSAGGAEAVEKLLDSIFISHPMRANAYTALARHLMLIDVQKAAEFARLAYETDPRPYRLKWLAFRRHDADDPITADAMLDLLPADITMSESEQRQVMRIRHESTQLRKKNAEKDANVQKQKNTENQNIVQLTKQVEELRREAERLRQQQKELQNTADVRQADLKATQANLTEQKVLVELRDAEVGAMRSAQAELQALADGYKAEAEALQVRLAEQEMLVENQKNEIVKLKLEAEVNSIYTSEQKEKVLQLESIKSNMNSEYANLQKIYFETQVELKSNLEKQISLAHEKANYVMRIHDLQKNTDHYLNLSGKMDKILDIIMDSKGR
>NZ_CP023415.1|WP_072312259.1|1246031_1247006_+|FkbM-family-methyltransferase
MNKNYYLYHMNVDSISYNIVLYNKDIDYISKTIFEKKIPYEIVMLRHIVKNIKHEGIFVDIGANIGNHSMYVAAQTGCDIVAFEPNTLLYEAFMESISNNNFTSSIDLNCFALGSKAGKGKYVKEISNNTGAQSIATGDGEIEISTLDNFTINKKISAIKIDVEGMELDVLQGAIETIKNNKPMLYIECADMNNFSSVFSFLVNLRYFYVNTFNATPTHFFVHYDDLHMVYYEINSTISNYIYNLPNRIKTLSKDLNNASKRIADLEKQIDNITKDKEKISAKNCELNSTVDIIINENSLLTKKIAEQELYISEILLKNTNIIS
>NZ_CP023415.1|WP_072312258.1|1247018_1248137_+|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKIMSVFGTRPEAIKMAPVVKALADDSFFDAKVCVTAQHRQMLDQVLELFAIKPDFDLDLMQPDQSLGDITGSVLKGMHGVFSQWRPDMVLVHGDTTTTLAAGLSAYYAKVSIGHVEAGLRTGDKFSPWPEETNRHLTGVLADVHFAPTERAKENLLHEGVSSERIHITGNTVIDALLSIVERIRTDAALRQQLSSLFSFLDAAKSLVLVTGHRRENWGSGFENICQAIASIARRGDVQIVYPVHLNPHVQEPVRRILSDAPNVFLLKPQSYLPFVYLMHHCTLVLTDSGGIQEEAPSLGKPVLVMRNTTERPEALAAGTAKLVGTDKNCITREVGRLLDDQAVYQTMAEAHNPYGDGNAAQHIRTTLKTIH
>NZ_CP023415.1|WP_072312257.1|1248144_1249401_+|UDP-N-acetyl-D-mannosamine-dehydrogenase
MSYTSISVIGLGYIGLPTAALIASHVQNVIGVDVSEEVVNSVNTGTVHSVEPGLTELLAEVTAKGWLRAVTVPEPADVFIIAVPTPITDEKKPDLSYVRAAALSLAPALRKGALVILESTSPVGTTEQVSNWLAEARPDLTFPHQSGEDADVQIAYCPERIMPGKMLGELVNNDRIVGGLTEKATAMAVDLYKIFVLGQIVTTTTRTAEMCKLVENSFRDVNIAFANELSMICDNLDIDVWELIELANRHPRVNILQPGCGVGGHCIPVDPWFIVASAPTEACLIKNAREINDYKPRWVATKIKKRVASFFERNPKRRLEDLRIACLGVSYKANLDDIRNSPAIEIIEAISELGSKILVVDPNIKTLPGKMKSNIKLEKIENIKNADIVCVLISHDMFILEKDIFSNGDHVVNVTSVI
>NZ_CP023415.1|WP_096152646.1|1249418_1250339_+|hypothetical-protein
MCNDGILKKANRLIKEKKYHKALVELNYFNDNCPELRHIINYNFLFIKNNIDYIVSLTSYPKRISTCHLVIESILAQYTKNIKVILWLAREEFPGREKDLPAELRALVSDEFSIEWCENIYSFKKLIPSLLKYPEKIIITADDDVIYPQNWLDSLITSYIHSPEAVHCHRAHRVKIDVSGNIVEYSKWKKRIKSISPRFDNFMTGVGGVLYPQNSLFFEVLRKDLFLDLCRFGDDIWFWAMCVLNGTKIRVVKDGFNKFQNIENTQDDNLWESNVNLGRNDIMINSVIERYPDILKKLVTSEDSNL

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Crispr_ID: NZ_CP023415_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023415_3

2550293-2550400

Orphan

Consensus_repeat	Method
GCGGGTTCAAATCCCGTCTCCCGCTCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023415_3

>merge|NZ_CP023415|3|2550293-2550400|CRISPRCasFinder
GCGGGTTCAAATCCCGTCTCCCGCTCCACTTTTGCGGGAATAACTCAACGGTAGAGTGTCAGCTTCCCAAGCTGAAAGTTGCGGGTTCAAATCCCGTTTCCCGCTCCA

>NZ_CP023415|3|3|2550293-2550400|CRISPRCasFinder
GCGGGTTCAAATCCCGTCTCCCGCTCCA	CTTTTGCGGGAATAACTCAACGGTAGAGTGTCAGCTTCCCAAGCTGAAAGTT
GCGGGTTCAAATCCCGTTTCCCGCTCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023415.1\|WP_049757393.1\|2542777_2543596_+\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|223654
NZ_CP023415.1\|WP_012624193.1\|2554837_2555497_-\|formate-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|319881
NZ_CP023415.1\|WP_012624195.1\|2552660_2553104_-\|cytochrome-c3-family-protein	unknown	unknown	gnl\|CDD\|366912
NZ_CP023415.1\|WP_012624196.1\|2548555_2549860_+\|phenylacetate--CoA-ligase	unknown	unknown	gnl\|CDD\|341239
NZ_CP023415.1\|WP_012624199.1\|2545987_2546230_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023415.1\|WP_012624202.1\|2541758_2542649_+\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NZ_CP023415.1\|WP_083577938.1\|2555546_2558585_-\|formate-dehydrogenase-N-subunit-alpha	unknown	unknown	gnl\|CDD\|273689
NZ_CP023415.1\|WP_072311674.1\|2546222_2547788_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463
NZ_CP023415.1\|WP_041723865.1\|2547792_2548215_-\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|376779
NZ_CP023415.1\|WP_012624206.1\|2536877_2537633_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224042
NZ_CP023415.1\|WP_072312146.1\|2560938_2561607_-\|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl\|CDD\|133000
NZ_CP023415.1\|WP_012624194.1\|2553549_2554527_-\|formate-dehydrogenase-accessory-protein-FdhE	unknown	unknown	gnl\|CDD\|319975
NZ_CP023415.1\|WP_012624187.1\|2562707_2563505_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP023415.1\|WP_012624189.1\|2561896_2562385_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_CP023415.1\|WP_012624191.1\|2559042_2560722_-\|trehalose-binding-protein	unknown	unknown	gnl\|CDD\|239599
NZ_CP023415.1\|WP_012624203.1\|2540795_2541644_+\|phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270371
NZ_CP023415.1\|WP_096152808.1\|2550685_2551861_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP023415.1\|WP_072311676.1\|2539724_2540402_-\|response-regulator	unknown	unknown	gnl\|CDD\|131209
NZ_CP023415.1\|WP_150083000.1\|2552008_2552242_-\|type-VI-secretion-system-contractile-sheath-large-subunit	unknown	unknown	unknown
NZ_CP023415.1\|WP_072311675.1\|2544188_2545721_-\|outer-membrane-homotrimeric-porin	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023415.1\|WP_049757393.1\|2542777_2543596_+\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	9.34725e-92
NZ_CP023415.1\|WP_012624193.1\|2554837_2555497_-\|formate-dehydrogenase-subunit-beta	gnl\|CDD\|319881	cd10559, W-FDH, tungsten-containing formate dehydrogenase, small subunit. This subfamily contains beta subunit of Tungsten-containing formate dehydrogenase (W-FDH), a member of the DMSO reductase family. W-FDH contains a tungsten instead of molybdenum at the catalytic center. This enzyme seems to be exclusively found in organisms such as hyperthermophilic archaea that live in extreme environments. It is a heterodimer of a large and a small subunit; the large subunit harbors the W site and one [4Fe-4S] center and the small subunit, containing three [4Fe-4S] clusters, functions to transfer electrons.	7.72171e-114
NZ_CP023415.1\|WP_012624195.1\|2552660_2553104_-\|cytochrome-c3-family-protein	gnl\|CDD\|366912	pfam02085, Cytochrom_CIII, Class III cytochrome C family.	1.70476e-20
NZ_CP023415.1\|WP_012624196.1\|2548555_2549860_+\|phenylacetate--CoA-ligase	gnl\|CDD\|341239	cd05913, PaaK, Phenylacetate-CoA ligase (also known as PaaK). PaaK catalyzes the first step in the aromatic degradation pathway, by converting phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Phenylacetate-CoA ligase has been found in proteobacteria as well as gram positive prokaryotes. The enzyme is specifically induced after aerobic growth in a chemically defined medium containing PA or phenylalanine (Phe) as the sole carbon source. PaaKs are members of the adenylate-forming enzyme (AFE) family. However, sequence comparison reveals divergent features of PaaK with respect to the superfamily, including a novel N-terminal sequence.	0
NZ_CP023415.1\|WP_012624202.1\|2541758_2542649_+\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	3.56254e-96
NZ_CP023415.1\|WP_083577938.1\|2555546_2558585_-\|formate-dehydrogenase-N-subunit-alpha	gnl\|CDD\|273689	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit. This model describes a subset of formate dehydrogenase alpha chains found mainly in proteobacteria but also in Aquifex. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits of 32 and 20 kDa. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The electrons are utilized mainly in the nitrate respiration by nitrate reductase. In E. coli and Salmonella, there are two forms of the formate dehydrogenase, one induced by nitrate which is strictly anaerobic (fdn), and one incuced during the transition from aerobic to anaerobic growth (fdo). This subunit is one of only three proteins in E. coli which contain selenocysteine. This model is well-defined, with a large, unpopulated trusted/noise gap. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	0
NZ_CP023415.1\|WP_072311674.1\|2546222_2547788_-\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
NZ_CP023415.1\|WP_041723865.1\|2547792_2548215_-\|ribosome-silencing-factor	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	4.5251e-38
NZ_CP023415.1\|WP_012624206.1\|2536877_2537633_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	6.71253e-173
NZ_CP023415.1\|WP_072312146.1\|2560938_2561607_-\|molybdenum-cofactor-guanylyltransferase	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	6.0429e-36
NZ_CP023415.1\|WP_012624187.1\|2562707_2563505_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.00376e-115
NZ_CP023415.1\|WP_012624189.1\|2561896_2562385_+\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	4.97599e-22
NZ_CP023415.1\|WP_012624191.1\|2559042_2560722_-\|trehalose-binding-protein	gnl\|CDD\|239599	cd03522, MoeA_like, MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.	2.23073e-126
NZ_CP023415.1\|WP_012624203.1\|2540795_2541644_+\|phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.29846e-103
NZ_CP023415.1\|WP_096152808.1\|2550685_2551861_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.10219e-117
NZ_CP023415.1\|WP_072311676.1\|2539724_2540402_-\|response-regulator	gnl\|CDD\|131209	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB. PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself. It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well. [Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	1.07789e-85
NZ_CP023415.1\|WP_012624194.1\|2553549_2554527_-\|formate-dehydrogenase-accessory-protein-FdhE	gnl\|CDD\|319975	cd16341, FdhE, formate dehydrogenase accessory protein FdhE and similar proteins. This family contains formate dehydrogenase accessory protein FdhE and FdhE-like protein, found largely in gamma- and some beta-Proteobacteria, where the fdhE genes are almost always genetically-linked to the structural genes for formate dehydrogenases. FdhE is required for the assembly of formate dehydrogenase although not present in the final complex. In E. coli, FdhE interacts with the catalytic subunits of the respiratory formate dehydrogenases. Purification of recombinant FdhE demonstrates the protein is an iron-binding rubredoxin that can adopt monomeric and homodimeric forms. E. coli FdhE interacts with the catalytic subunits, FdnG and FdoG, of the Tat- dependent respiratory formate dehydrogenases. Site-directed mutagenesis has shown that conserved cysteine motifs are essential for the physiological activity of the FdhE protein and are also involved in Fe(III) ligation. The iron likely is redox active, suggesting that the switch from aerobic to anaerobic conditions may be important in modulating FdhE function. Alternatively, FdhE may be involved in an electron transfer reaction, similar to other rubredoxins.	5.03573e-57

>NZ_CP023415.1|WP_012624196.1|2548555_2549860_+|phenylacetate--CoA-ligase
MLFDIKQETLPREEMEALQLRRLRDLCNRVYANVPFYRKRFDEAGISPADIKSLADLKLLPFTEKQDLRDYYPFGLFAVPRDHIVRLHASSGTTGKAVVVGYTARDLETWAELMARSMSAAGVSRSDVVHIAYGYGLFTGGLGAHYGAERIGATVVPASGGATRRQAHLMRDFGATVLCATPSYALHLWEAANEAGVDFRELSLRTGIFGAEPWSEAMRRDIEEKMGMDAMNIYGLSEIMGPGVAMECVEAKHGMHLWEDHILPEIIDPVTGEQLPPGQVGELVLTTLTKEGIPMLRYRTRDLTSLDYTPCRCGRTHVRISRLQGRSDDMLIIRGVNVFPQQIEGLLMESDGLTPNYQIIVGTSNNLDTLEVRVEVSDTLFADEIRKLQMLENRLQKSIKEFLGVSAKVRLMEPRSIQRSEGKAQRIVDQREKP
>NZ_CP023415.1|WP_041723865.1|2547792_2548215_-|ribosome-silencing-factor
MENNHPNTPAGGRAPIQFSDVPASRKAADVAQWLEEHKALRVVCLDLEGEGSFADVLVVAGANSVRHAQSLADGVAQLCREHNYEFLRTEGYATGQWILVDMNDVIVNIFQEPVRELYALEALWGHGSGKGTAAGQNSGE
>NZ_CP023415.1|WP_072311674.1|2546222_2547788_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MTPTLLLILDGWGIAPPGPGNAPSVARTPNLDALAARCPQSRLVASGREVGLPVGYMGNSEVGHLNIGAGRVVYQDMTRIDVAVEDGSFATNPVLGEVLSAVRRSGGRVHFVGLLSDGGVHSHIRHLEALCAMAAEQDIPVRIHALTDGRDCPPHSGADFVRALASSIRNQPQARIASLVGRFYAMDRDKRWERVKEAWDVIVHGKAPLAFDPVAAVEASYAEGITDEFLKPVRFDTGDVAPGLADGDAVFFFNFRADRMRELTAAFITPGFEGFDRGKMPVLSALASMTSYEASFNLPVAFPKEAVDQGLGQVVSRQGMRQLRLAETEKYAHVTYFFNGGVEEPFTGEDRILVPSPRDVATYDLKPAMSAPLVTDEFIKAWNSGQYDLVVCNLANGDMVGHTGVLEAAVAACEVVDRCVGRMVEAVEARGGRMLIIADHGNCEVMLTPEGQPQTAHTTNPVPCILLEPGGKVKALADGRLADVAPTLLALWGLAPSPLMTGQNLAREDGTKPDRKENARG
>NZ_CP023415.1|WP_012624199.1|2545987_2546230_-|hypothetical-protein
MAERKRPIEPVAPDGMEILFFYQCPGCGKHVPQASPTEPRMVRCPGCGQGFPIIPVDEHSLHYVRIMLAEGKAAADPDFL
>NZ_CP023415.1|WP_072311675.1|2544188_2545721_-|outer-membrane-homotrimeric-porin
MKRICTLVLAAGLLLGAATGASAIDFKAKGQWLMGFGVGDANPIKNYRDGATGKSSKFNSDDDFQAAQRLRLQLDAVASEALSGTVYFEIGTAQWGKASNGAALGADGTNQIKLKRAYLDWIVPDTDAKVRMGIQGVALPNVAGGSAVLDADAAGITVNYKFNENVGLTALWARPLNDNYVDGTNSKQNNYLDNMDLFSLMVPLTFDGVNVTPWAMYGMVGKNALNGAWNKDNSAYDGVGTADGNLHYSLRPYPGMTGADKIGSTGNDYGNAFWAGLPIAVTMFDPLNIELDINYGYMQGMGRFDAVKNGGGDKRASTERQGWLAKALVEYKLDWGVPGIFGWYASGDDSNPKNGSERMPSVAASGNFTSFIGDGNMGWIRQDYSLTYDGTWGIGAQIRDMSFIEDLSHTFRVAYWGGTNSPTMAKYMDSAYAWSDGWGNNTGPYLTTNDGMLEFNLVNSYQIYENLEMNLELDYVANFMDNSTWKKANNGGSFDKQDMWKAQVVFAYSF
>NZ_CP023415.1|WP_049757393.1|2542777_2543596_+|phosphate-ABC-transporter-permease-PstA
MFIFLRGVAACNVLALVAVCGFLLYHGLPALSWEFISQSPRSMMTEGGILPCIIGTAILSLGALLLAFPLGVASAVYLHEYAKRNAFARYVRLGVNNLAGVPSVVFGLFGLSFFVTFCGLGVSILSGVLTLAVLTLPVIIGTAEEALRNVPDTYREASLALGATKSQTISRVVLPCALPGMLTGAILGVARAAGETAAIMFTAAVFYTPKTPDSIFSSVMALPYHMYVLATAGTEIEKTRPLQYGTGLVLLLLVLGMNLVAILLRDHLQRKR
>NZ_CP023415.1|WP_012624202.1|2541758_2542649_+|phosphate-ABC-transporter-permease-subunit-PstC
MRSADLKEKLVRYILTGMAGSSLLALAGIVIFLFMEGLPLFAHYPVMDFLFGRLWYPTEDPGLFGIFPLLAASLAVTFFSSLLAVPLGVLTAVYLTEIAHPAVRRVIKPFVELLAALPSVVLGFLGMVVLAPFLQDYLGAATGLNLLNASVVLAFMSVPTICSVSEDALYSVPRDLREASLALGATRWQTTVRVVIPAALSGIGTAVMLGMSRAIGETMVVLMVAGGAGIIPTSLLDPVRPMPASIAAEMAEAPFRSDHYHALFAIGIVLFLLTLAFNMLAAHIAEKHRQAGTSSL
>NZ_CP023415.1|WP_012624203.1|2540795_2541644_+|phosphate-ABC-transporter-substrate-binding-protein
MSFDCKKRVSRYSSRLAACALAVLCWSASAFAAQQVIINGSTTVLPVVQKAGEAFMASHPGTELSISGGGSGNGIKALIEKQCDVAMSSRDIKDKEKDAAAKNGITPLRTAIAIDAIVPVVHPANKVGALTLAQLRDIYTGKVTNWKDLGGEDAQIVAISRDTSSGTFESWEELVMNKERVSPRALMQASNGSVVQTVSKNKNAIGYVGLGYVDKSTRPVTVDGVSPSAETAISKQWPIARELYIFTNGAPQGAVKEFVEYLVAPDKGQKDVLAVGYVPLSK
>NZ_CP023415.1|WP_072311676.1|2539724_2540402_-|response-regulator
MSQQILIVEDEADIRELLRFNLEREGFSVLEAADGNEALRLARQHLPDLMLLDVMMPGPDGFEVCRLLGAQAETAHIPVLMLTARGEEMDRVVGLSLGADDYVVKPFSVRELMLRIRAVLRRGTRSGESPVLERHGIRLRPDAHTAEAHGEELQLTATEFRLLEDLLRHAGSVRTREQLLNKVWGYSFEGYARTVDTHVRRLRAKLGHAASMLETVRGVGYRIKE
>NZ_CP023415.1|WP_012624206.1|2536877_2537633_-|phosphate-ABC-transporter-ATP-binding-protein
MKEYLQARNVSVYYGQHKALHEVSLDFEPCRVTALIGPSGCGKSTFLRCLNRMNDLVPGARVEGEILLDGNDVNRPDTDVVSLRCRVGMVFQKPNPFPKTIYENVAYGLRVNGLRDESLIAEKVEFSLRRAAIFDEVKDRLQAPALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEESIRELRESLSIIIVTHNMQQAARVSDTTAFFYMGELVEHNATDIMFTRPGKKQTEDYITGRFG
>NZ_CP023415.1|WP_096152808.1|2550685_2551861_+|IS256-family-transposase
MHSKKKVPVIAVDEEELRTHVSEVVRQSVEETLNGLLDAEADTLCQARRYERNAERASTRAGHYERNLQTKAGTVQLKVPKLRHMPFETAIIERYRRRESSVEEALVEMYLAGVSVRRVEDITEALWGSRVSPSTISDLNQKIFERVEEWRNRPLEPKSPYIFVDGIWLKRSWGGEVQNVSVLVAIGVSTGGFREILGVAEGSREDAESWRQFLRYLRERGLEQIDLVVSDKSLGLLEALGEFYPDAKWQRCVVHFYRNVLHAVPRGKAKEVALMLKAVHAQEDKEAAHRKSVEVISKLRAQRLEKAARIVESGCDETLSYYDFPVAHWRHIRTNNPLERLNREIRRRTRVVGSFPDGHAALMLVAARLRYMAGQKWGTQRYMNMNQEISV
>NZ_CP023415.1|WP_150083000.1|2552008_2552242_-|type-VI-secretion-system-contractile-sheath-large-subunit
MKLNNEITKKQRGEIERILSNWTNYLNSVPPASDEVKVHRWFGANTQIVKKDDFNQGLRRIIDETRMKLEASSVQHQ
>NZ_CP023415.1|WP_012624195.1|2552660_2553104_-|cytochrome-c3-family-protein
MKTLVITLFALTFLWAGGAQARSVKEMSQAIKEPIEIEASGSKRMNVMFPHTAHKGISCFHCHHEEGSDGRYVACTECHATPGARERDPMSMFMAFHSKNSDRSCLGCHKKLAAENPGKFPQFKGCRPCHMSPAAREAAEAAKAAKK
>NZ_CP023415.1|WP_012624194.1|2553549_2554527_-|formate-dehydrogenase-accessory-protein-FdhE
MASSCQSVAKTLAEVVECRPVLEPVLRAFEPLLAAQAQLADDLADSIRASGLELPEAQPGALEQGLSLLAGVPLTGAAAPLRQSAEKLLPLLATLETMAPHLPALEAFLLAPAGAAKKGKGAKTRQDPREALAEALLSGNSEEETRLAAAHDLDPSILHFAFSFVLAPVLRAIVSGSLPEEGDAPWDAGSLWRQGYCPVCGSFATIAWLDKPLVDEKNAYLAGGGGKKHLHCGLCGTDWKFMRGTCPSCGEKGSGVIEMLRESGSAHGERLDWCTKCKTYCPTVDLRERDGKPDMDALALGMMHLDMVAARKKLRPLKVSFWNTF
>NZ_CP023415.1|WP_012624193.1|2554837_2555497_-|formate-dehydrogenase-subunit-beta
MPKTFLVDTTRCTACRGCQLACKEWHDLPANHTKQRGTHQNPPDLNPNNLKIVRFHEYINDEGNVVWNFFPDQCRHCLTPPCVDVADMAVPGAMIQDKKTGAVLATEKSAKLSEDDAQAIQEACPYNIPRRDPENGRLTKCDMCIDRVSAGMQPICVKTCPTGAMVFGEREEVLPLAQKRLENAKKRWPKAFLADMEDVSVIYLLADTKDKYYEFAAFM
>NZ_CP023415.1|WP_083577938.1|2555546_2558585_-|formate-dehydrogenase-N-subunit-alpha
MKSTRRSFLKGVGAGVLCLTLGHLGFDLGEAQAYAGKLKIEGAKEVSSICPFCSVQCQIIAYVKGGKLVSTEGDPDFPITEGALCAKGAALYSMYTSDHRLMKPMYRAPFSDKWEEKDWDWTLEQIARRVKDARDKDMILKNDKGQTVNRLETIFWMGTSHASNEECAVIHQALRGLGVVHMDHQARVUHSPTVAALAESFGRGAMTNHWIDIKNADAVLIIGSNAAEHHPVAFKWIMKAKDNGAVLMHVDPKFSRTSARCDFHVPLRSGTDIPFLGGMLNYILENGLYHKEYVNNYTNAAFVVGDGYAFEDGLFSGYDAAARKYDKSKWALAKGPDGGPVVDPTHQNPRCVINLMKDHYSRYTLKNVSDVTGVSQDNLLKVYKNFCATGRPDKAGTILYALGWTQHTVGVQNIRLSSLVQLLLGNIGIAGGGINALRGEPNVQGSTDHALLYNNIPGYHGTPQAPWQTLGEYNKANTPVTVVPNSANWWGNRPKYVTSLLKGWFGDAATPENDFCYSLLPKLEPGVDYSYMFVMDRIYNKKIKGGFIMGVNPMNSFPNTNKMRAALDNLDWLVCSEIHNSETTDNWQRPGVDPKTKKTEVFLLPSAHRIEKAGTISNSGRWLQWFDKAVEPAGEARNFADVVVPLFNTIRRMYKTEGGVLPEAVLQMHWTDKYDPEDWARRINGFFWADTKVGDKTYKRGQLVPAFGALKDDGTTSSLNWIYTGSWTEEDGNKSRRRDPSQTPMQAKIGLFPNWSWCWPLNRRILYNRASVDMNGKPFNPNRAVIEWDGSKWVGDVPDGPWPPMSDPKGKLPFIMVKDGLAQFYGPGPADGPFPEHYEPAETPLATHPFSKQLSSPVYKYHKTDMDQIAPPADPRYPIVLTTYSLTEHWCGGGETRNVPNLLETEPQLYVEMSHELAKEKGIKNGDGVVLESARGNCEAIAMVTVRIRPFTVMGKTVHLVGMPFAFGWTTPKTGDSTNRLTVGAYDPNTTIPESKACCVNLRKADKLTEIG
>NZ_CP023415.1|WP_012624191.1|2559042_2560722_-|trehalose-binding-protein
MNIGSYTFDEFRRLAENFHGYAAPGLLVGGYMVELAKRHIPEGTLFEAVVESGKCLPDAVQLLTLCSIGNGWMKIHNLGRYAVSLFDKHTGEGVRVSLDPEKMAAYPEIKAWFFKEKPKKDQDVPRLESEIEQAGDSICTVEPVTIKRRFIGHKHMTRIVCCPGCGEAYPVEDGPVCRGCQGEAPYVVARREIKAAPRQETAGIRVVPVEEAVGHTVAHDMTRIDPGQFKGPEFKAGQRISVGDICRLQQMGRFHVAVTDSPVGESDFAAYAARSGDTVHENEAAEAFARRMAGEGVVFSLPPREGKVEFTAGRAGLFTVDVERMRRFNLVPEVMVASRQDATVVKQGGPLAGTRAIPLFISRERLSQALETLEGGPLFSVLPLRKARVGILVTGTEVFQGIIEDKFIPIITAKVAMLGCEVVRTGIVPDDRVMMGKAVAEMRTAGVDLLVTTGGLSVDPDDVTRQALLDAGLADVLHGVPVLPGTMSLIGRIPGPGGGMQVLGVPACALYFKTTFLDLVLPRLLAGREITRAELARLGEGGYCLACHTCTWPKCWFGK
>NZ_CP023415.1|WP_072312146.1|2560938_2561607_-|molybdenum-cofactor-guanylyltransferase
MKSEKGRVAGVVLAGGLSSRMGTDKARLRLPGVCDTAFDSSGAADMLFTAWTLVRSVLPFCLVSCRADAPRQGYDCVFDAMPGQGPAAGLQAALRRAGELGYTALLALSCDLPLMDALTLRRLLAARDAAPPQTLVTAYRARDTGRVESLTAVYEVAALPHFNAALARGERKLGLMVPGELRLFVDYGPEESEPFFNCNCPADLEQARILLAQKNARFTEKG
>NZ_CP023415.1|WP_012624189.1|2561896_2562385_+|CvpA-family-protein
MGQDIFDLIVVLTLVFFAGRGYLHGFVGEVAGIVSLLGGFWTAHNYHDRLSPHLTLITDPGWRTVAAYVLVFLGVLVSVALIARLLQKILSFSFVTWADRMAGAMLGLAKGALLWSLGMLLLQKFFSQAAFMQHSRVLPYFNALTAQVRGWLPPDLVSRLGL
>NZ_CP023415.1|WP_012624187.1|2562707_2563505_+|nucleoside-triphosphate-pyrophosphohydrolase
MEKNAVEELQGIIDTLTGPEGCPWDKEQTAHTLADYIIEESHELVSAIRSGNVADIREELGDVAFLLLFVARLYEKDGQFTFADALNNNRAKMIRRHPHVFGDTVFDSLDEQLKAWEKIKRAEHADEDGKPKGLFDSLPESLPPLIKAYRIHSKAARVGFTWTKDEEVEQQVEAEWLEWLDASANSNGEAQKHELGDLLFSITELGRRKGIKASEALDLATRRFLKRFTRMEELARTQGQDFNALSLDEKDELWNTAKAEEEARS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023415_2	2.3\|1227074\|33\|NZ_CP023415\|PILER-CR	1227074-1227106	33	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	7687-7719	6	0.818
NZ_CP023415_2	2.4\|1227135\|33\|NZ_CP023415\|PILER-CR	1227135-1227167	33	MN379632	Chicken microvirus mg4_207, complete genome	977-1009	6	0.818
NZ_CP023415_2	2.22\|1227075\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227075-1227106	32	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	7688-7719	6	0.812
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MN379632	Chicken microvirus mg4_207, complete genome	977-1008	6	0.812
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	138789-138820	6	0.812
NZ_CP023415_1	1.1\|747078\|33\|NZ_CP023415\|CRISPRCasFinder	747078-747110	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1025324-1025356	7	0.788
NZ_CP023415_2	2.18\|1227989\|33\|NZ_CP023415\|PILER-CR	1227989-1228021	33	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	138788-138820	7	0.788
NZ_CP023415_2	2.30\|1227563\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227563-1227594	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1809384-1809415	7	0.781
NZ_CP023415_2	2.30\|1227563\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227563-1227594	32	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	116516-116547	7	0.781
NZ_CP023415_2	2.35\|1227868\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227868-1227899	32	MN693413	Marine virus AFVG_25M209, complete genome	13550-13581	7	0.781
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	199874-199905	7	0.781
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP013539	Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence	185627-185658	7	0.781
NZ_CP023415_2	2.11\|1227562\|33\|NZ_CP023415\|PILER-CR	1227562-1227594	33	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	116515-116547	8	0.758
NZ_CP023415_2	2.11\|1227562\|33\|NZ_CP023415\|PILER-CR	1227562-1227594	33	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	269906-269938	8	0.758
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	482026-482057	8	0.75
NZ_CP023415_2	2.21\|1227014\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227014-1227045	32	JF974315	Rhizobium phage RR1-B genomic sequence	20464-20495	8	0.75
NZ_CP023415_2	2.21\|1227014\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227014-1227045	32	MN694736	Marine virus AFVG_250M374, complete genome	26898-26929	8	0.75
NZ_CP023415_2	2.22\|1227075\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227075-1227106	32	MK416015	Klebsiella phage ST16-OXA48phi5.4, complete genome	16407-16438	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MH669017	Mycobacterium phage Zelink, complete genome	74350-74381	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MK524527	Mycobacterium phage ThreeRngTarjay, complete genome	74403-74434	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MK279849	Mycobacterium phage Duke13, complete genome	70952-70983	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MN183286	Mycobacteriophage Yeet, complete genome	73601-73632	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MK524529	Mycobacterium phage Phoebus, complete genome	75812-75843	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	JN201525	Mycobacterium phage Thibault, complete genome	71122-71153	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	KF114875	Mycobacterium phage Redno2, complete genome	71200-71231	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MK524504	Mycobacterium phage Hughesyang, complete genome	74458-74489	8	0.75
NZ_CP023415_2	2.23\|1227136\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227136-1227167	32	MK967379	Mycobacterium phage HokkenD, complete genome	73572-73603	8	0.75
NZ_CP023415_2	2.30\|1227563\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227563-1227594	32	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	269906-269937	8	0.75
NZ_CP023415_2	2.36\|1227929\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227929-1227960	32	MN693461	Marine virus AFVG_25M208, complete genome	30117-30148	8	0.75
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP013053	Sinorhizobium americanum CCGM7 plasmid B, complete sequence	154326-154357	8	0.75
NZ_CP023415_2	2.2\|1227013\|33\|NZ_CP023415\|PILER-CR	1227013-1227045	33	JF974315	Rhizobium phage RR1-B genomic sequence	20463-20495	9	0.727
NZ_CP023415_2	2.2\|1227013\|33\|NZ_CP023415\|PILER-CR	1227013-1227045	33	MN694736	Marine virus AFVG_250M374, complete genome	26898-26930	9	0.727
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	367897-367928	9	0.719
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	250709-250740	9	0.719
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	876026-876057	9	0.719
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	170952-170983	9	0.719
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	501299-501330	9	0.719
NZ_CP023415_2	2.22\|1227075\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227075-1227106	32	MF185718	Arthrobacter phage Colucci, complete genome	67050-67081	9	0.719
NZ_CP023415_2	2.27\|1227380\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227380-1227411	32	NC_013160	Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence	71155-71186	9	0.719
NZ_CP023415_2	2.30\|1227563\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227563-1227594	32	CP054922	Streptomyces sp. NA03103 plasmid unnamed2, complete sequence	93512-93543	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_009717	Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence	199189-199220	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	501205-501236	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	175271-175302	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	196245-196276	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	625101-625132	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	154275-154306	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	196682-196713	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	497561-497592	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	625234-625265	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	177938-177969	9	0.719
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_031122	Gordonia phage Eyre, complete genome	36878-36909	9	0.719
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1081683-1081714	10	0.688
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	683413-683444	10	0.688
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	439294-439325	10	0.688
NZ_CP023415_2	2.20\|1226953\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1226953-1226984	32	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	340669-340700	10	0.688
NZ_CP023415_2	2.32\|1227685\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227685-1227716	32	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	42544-42575	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	1299021-1299052	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	117830-117861	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	129840-129871	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	1514082-1514113	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	606179-606210	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	446840-446871	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	1349185-1349216	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	55161-55192	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1265584-1265615	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	710900-710931	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021821	Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence	268277-268308	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	962451-962482	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1356613-1356644	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	604508-604539	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1443004-1443035	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	506452-506483	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	744172-744203	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	480164-480195	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	1404547-1404578	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	405049-405080	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1048311-1048342	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1199887-1199918	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	146815-146846	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	110700-110731	10	0.688
NZ_CP023415_2	2.37\|1227990\|32\|NZ_CP023415\|CRISPRCasFinder,CRT	1227990-1228021	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	117495-117526	10	0.688

1. spacer 2.3|1227074|33|NZ_CP023415|PILER-CR matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.818

gttctgcctgggcttgagcaacggccttgggaa	CRISPR spacer
gttctgccggggcctgagcaacggctgcaggaa	Protospacer
******** ****.***********. ..****

2. spacer 2.4|1227135|33|NZ_CP023415|PILER-CR matches to MN379632 (Chicken microvirus mg4_207, complete genome) position: , mismatch: 6, identity: 0.818

gaacttcggagaactggatagtctgtttaccgc	CRISPR spacer
gaacctcggaaaactggatagtctggcgaccac	Protospacer
****.*****.************** . ***.*

3. spacer 2.22|1227075|32|NZ_CP023415|CRISPRCasFinder,CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttctgcctgggcttgagcaacggccttgggaa	CRISPR spacer
ttctgccggggcctgagcaacggctgcaggaa	Protospacer
******* ****.***********. ..****

4. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MN379632 (Chicken microvirus mg4_207, complete genome) position: , mismatch: 6, identity: 0.812

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
aacctcggaaaactggatagtctggcgaccac	Protospacer
***.*****.************** . ***.*

5. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 6, identity: 0.812

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gcagcggtcggaaatctcgccggcgggttcgc	Protospacer
*** . ***** ** *************** *

6. spacer 1.1|747078|33|NZ_CP023415|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 7, identity: 0.788

ggacgggaacattgacgcgccccacccatttac	CRISPR spacer
gcgccggaacagtgacgcgccgcacccatttgg	Protospacer
* .* ****** ********* *********.

7. spacer 2.18|1227989|33|NZ_CP023415|PILER-CR matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 7, identity: 0.788

tgcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
ggcagcggtcggaaatctcgccggcgggttcgc	Protospacer
 *** . ***** ** *************** *

8. spacer 2.30|1227563|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

gatcagg---gccggggtcagcgggagggtcaggg	CRISPR spacer
---caggttctccggggtcagccggtgggtcagga	Protospacer
   ****    *********** ** ********.

9. spacer 2.30|1227563|32|NZ_CP023415|CRISPRCasFinder,CRT matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gatcagg--gccggggtcagcgggagggtcaggg	CRISPR spacer
--ccggggtgccggggtcagcgggaggggccggt	Protospacer
  .*.**  ******************* * **

10. spacer 2.35|1227868|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MN693413 (Marine virus AFVG_25M209, complete genome) position: , mismatch: 7, identity: 0.781

gcgatgcgggacaaaccaatggtgtattttta	CRISPR spacer
gagatataagacaaaccaatggtgatttttta	Protospacer
* ***....***************  ******

11. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 7, identity: 0.781

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gaatcgatcggcaagctcaccggcggggtcgc	Protospacer
* **. .***********.******** ** *

12. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP013539 (Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence) position: , mismatch: 7, identity: 0.781

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gaatcgatcggcaagctcaccggcggggtcgc	Protospacer
* **. .***********.******** ** *

13. spacer 2.11|1227562|33|NZ_CP023415|PILER-CR matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

----ggatcagggccggggtcagcgggagggtcaggg	CRISPR spacer
cccggggt----gccggggtcagcgggaggggccggt	Protospacer
    **.*    ******************* * **

14. spacer 2.11|1227562|33|NZ_CP023415|PILER-CR matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 8, identity: 0.758

ggatcagggccggggtcagcgggagggtcaggg	CRISPR spacer
ggccggcgggcggggtcagcgggcgggtcagcg	Protospacer
** . . ** ************* ******* *

15. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
gcggccagataggcgcggcccatgctggtggt	Protospacer
* *   .*** *******************.

16. spacer 2.21|1227014|32|NZ_CP023415|CRISPRCasFinder,CRT matches to JF974315 (Rhizobium phage RR1-B genomic sequence) position: , mismatch: 8, identity: 0.75

ggcgcatccgtcaccgtcttcgccataccagc	CRISPR spacer
ggcgcatccgtcaacgtcttcgcccgtgcgct	Protospacer
************* **********    *. .

17. spacer 2.21|1227014|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MN694736 (Marine virus AFVG_250M374, complete genome) position: , mismatch: 8, identity: 0.75

ggcgcatccgtcaccgtcttcgccataccagc--	CRISPR spacer
ggtgcatccgtcaccgtcgtcgcc--tccgattt	Protospacer
**.*************** *****   **...

18. spacer 2.22|1227075|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MK416015 (Klebsiella phage ST16-OXA48phi5.4, complete genome) position: , mismatch: 8, identity: 0.75

ttctgcctgggcttgagcaacggccttgggaa	CRISPR spacer
gtctgcctgagattgagcaacggcttcaacaa	Protospacer
 ********.* ************.*... **

19. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MH669017 (Mycobacterium phage Zelink, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

20. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MK524527 (Mycobacterium phage ThreeRngTarjay, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

21. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MK279849 (Mycobacterium phage Duke13, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

22. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MN183286 (Mycobacteriophage Yeet, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

23. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MK524529 (Mycobacterium phage Phoebus, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

24. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to JN201525 (Mycobacterium phage Thibault, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

25. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to KF114875 (Mycobacterium phage Redno2, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

26. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MK524504 (Mycobacterium phage Hughesyang, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

27. spacer 2.23|1227136|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MK967379 (Mycobacterium phage HokkenD, complete genome) position: , mismatch: 8, identity: 0.75

aacttcggagaactggatagtctgtttaccgc	CRISPR spacer
cacttcgtagtactggatagtctgaattccat	Protospacer
 ****** ** *************  * **..

28. spacer 2.30|1227563|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 8, identity: 0.75

gatcagggccggggtcagcgggagggtcaggg	CRISPR spacer
gccggcgggcggggtcagcgggcgggtcagcg	Protospacer
* . . ** ************* ******* *

29. spacer 2.36|1227929|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MN693461 (Marine virus AFVG_25M208, complete genome) position: , mismatch: 8, identity: 0.75

tggccatatttataacctcctatattggattg	CRISPR spacer
gagccatatttatattctcctatatattgttg	Protospacer
 .************ .*********   .***

30. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP013053 (Sinorhizobium americanum CCGM7 plasmid B, complete sequence) position: , mismatch: 8, identity: 0.75

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gagcgcctcgccaagctcgccggcggggtcgc	Protospacer
* .. * *** **************** ** *

31. spacer 2.2|1227013|33|NZ_CP023415|PILER-CR matches to JF974315 (Rhizobium phage RR1-B genomic sequence) position: , mismatch: 9, identity: 0.727

gggcgcatccgtcaccgtcttcgccataccagc	CRISPR spacer
cggcgcatccgtcaacgtcttcgcccgtgcgct	Protospacer
 ************* **********    *. .

32. spacer 2.2|1227013|33|NZ_CP023415|PILER-CR matches to MN694736 (Marine virus AFVG_250M374, complete genome) position: , mismatch: 9, identity: 0.727

gggcgcatccgtcaccgtcttcgccataccagc--	CRISPR spacer
tggtgcatccgtcaccgtcgtcgcc--tccgattt	Protospacer
 **.*************** *****   **...

33. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 9, identity: 0.719

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
gccgccagataggcgcggcccatgctggtggt	Protospacer
*     .*** *******************.

34. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.719

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
gcggccagataggcgcggcccatgccggtggt	Protospacer
* *   .*** **************.****.

35. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
cggtggggaacggcgcggccgatggcgtccag	Protospacer
 ******** ********** *** .* . *.

36. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
gcggccagataggcgcggcccatgccggtggt	Protospacer
* *   .*** **************.****.

37. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
ctgaattgctcggcgccgcccgtgctggtgaa	Protospacer
  * .  * ******* ****.**********

38. spacer 2.22|1227075|32|NZ_CP023415|CRISPRCasFinder,CRT matches to MF185718 (Arthrobacter phage Colucci, complete genome) position: , mismatch: 9, identity: 0.719

ttctgcctgggcttgagcaacggccttgggaa	CRISPR spacer
agcgtgctggacttgagccacggccttggcga	Protospacer
  *   ****.******* ********** .*

39. spacer 2.27|1227380|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_013160 (Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence) position: , mismatch: 9, identity: 0.719

gtctggcttgacgatctgctttatgatctcgt	CRISPR spacer
ctctggcttgaggatctgctatatctacccaa	Protospacer
 ********** ******** ***   *.*.

40. spacer 2.30|1227563|32|NZ_CP023415|CRISPRCasFinder,CRT matches to CP054922 (Streptomyces sp. NA03103 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gatcagggccggggtcagcgggagggtcaggg	CRISPR spacer
ctggagcgtcggggtcagcgggagggtgacga	Protospacer
    ** *.****************** * *.

41. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_009717 (Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gccttcgtcggcaagctcgccggaatgactgt	Protospacer
** ******************** . * .. .

42. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gccttcgtcggcatgctcgccggattcctgcc	Protospacer
** ********** *********    .* .*

43. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaagctggcaggcgggcggtt	Protospacer
.*..************* ** ******.  *.

44. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
aaattcgccgtcaagctcgccggcgagcgggc	Protospacer
. *****.** **************.*.   *

45. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaagctggcaggcgggcggtt	Protospacer
.*..************* ** ******.  *.

46. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
ctgttcgtcggcatgctcgtcggcggtgtgtt	Protospacer
 ..********** *****.******  * *.

47. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gaggcgatcggccagctcgccggcgggatcgc	Protospacer
* . . .***** ************** ** *

48. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
aaattcgccgtcaagctcgccggcgagcgggc	Protospacer
. *****.** **************.*.   *

49. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaagctggcaggcgggcggtt	Protospacer
.*..************* ** ******.  *.

50. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
ctgctcgccggcacgctcgccggcggggccgc	Protospacer
 ...***.***** ************* .* *

51. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_031122 (Gordonia phage Eyre, complete genome) position: , mismatch: 9, identity: 0.719

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
gcccgcgtcggcaagctcgcccgcgcgtagct	Protospacer
** . **************** *** **  ..

52. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 10, identity: 0.688

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
cggtggggagcggcgcggcccgtgtcccgaac	Protospacer
 ******** ***********.**..   .*

53. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 10, identity: 0.688

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
cggtggggagcggcgcggcccgtgtcccgaac	Protospacer
 ******** ***********.**..   .*

54. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 10, identity: 0.688

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
gttcgggcatcggcgcggcccaggctgcgccg	Protospacer
*  .*** ************** ****    .

55. spacer 2.20|1226953|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 10, identity: 0.688

gggtggggatcggcgcggcccatgctggtgaa	CRISPR spacer
cggtggggagcggcgcggcccgtgtcccgaac	Protospacer
 ******** ***********.**..   .*

56. spacer 2.32|1227685|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 10, identity: 0.688

aggatgaaggccagccgccttagcatcggcaa	CRISPR spacer
ggtgcttcggccagccgccgcagcatcggcag	Protospacer
.* ..   *********** .**********.

57. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

58. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

59. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

60. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

61. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

62. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

63. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

64. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

65. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

66. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
aaattcgccgtcaagctcgccggcgaccgggc	Protospacer
. *****.** **************. .   *

67. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

68. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

69. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

70. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

71. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

72. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

73. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

74. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

75. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

76. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

77. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
caattcttcggcaagcccgccggcgctgctgc	Protospacer
  **** *********.********   .. *

78. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
caattcttcggcaagcccgccggcgctgctgc	Protospacer
  **** *********.********   .. *

79. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

80. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

81. spacer 2.37|1227990|32|NZ_CP023415|CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.688

gcattcgtcggcaagctcgccggcgggttctc	CRISPR spacer
acgctcgtcggcaatctctccggcgggcagaa	Protospacer
.*..********** *** ********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

834100 : 955076

Liberibacter_phage(11.54%)

protease,head,capsid,tRNA,tail,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072311617.1\|834100_835528_-\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_072311641.1\|835520_836855_-	hypothetical protein	NA	NA	NA	NA
WP_072311616.1\|836957_837224_-	DksA/TraR family C4-type zinc finger protein	A0A193GYU8	Escherichia_phage	3.4e-14	48.9
WP_012625359.1\|837786_838182_-	PaaI family thioesterase	NA	NA	NA	NA
WP_072311615.1\|838274_839201_-	Tim44 domain-containing protein	NA	NA	NA	NA
WP_096152583.1\|839349_840495_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312152.1\|840883_841720_-	DUF4111 domain-containing protein	NA	NA	NA	NA
WP_072312162.1\|841792_842932_-	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_072312153.1\|843077_843977_-	ComF family protein	NA	NA	NA	NA
WP_072312154.1\|844004_844700_-	flavodoxin family protein	NA	NA	NA	NA
WP_072312155.1\|844696_845323_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	5.9e-25	32.8
WP_096152615.1\|847325_848660_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_012625351.1\|848861_849854_+	ATPase	H6WG28	Cyanophage	9.0e-60	45.5
WP_072312156.1\|849856_851302_+	hypothetical protein	A0A0K2FIA0	Achromobacter_phage	6.6e-19	33.5
WP_012625349.1\|851320_851815_+	hypothetical protein	NA	NA	NA	NA
WP_012625348.1\|851921_852794_-	ModD protein	NA	NA	NA	NA
WP_012625347.1\|853421_855209_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.6e-60	36.7
WP_012625346.1\|855465_855660_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_083577940.1\|856343_858254_-	GTP-binding protein	NA	NA	NA	NA
WP_012625344.1\|858280_859429_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_072312158.1\|859448_860852_-	hypothetical protein	NA	NA	NA	NA
WP_072312159.1\|860885_861197_-	hypothetical protein	NA	NA	NA	NA
WP_012625341.1\|861193_861838_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_072312161.1\|862169_863354_+	hypothetical protein	NA	NA	NA	NA
WP_143142639.1\|863681_864179_+	hypothetical protein	NA	NA	NA	NA
WP_096152616.1\|864240_865209_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-45	36.7
WP_072312255.1\|866568_867282_+\|head,protease	HK97 family phage prohead protease	B0VK32	Azospirillum_phage	9.1e-30	42.8
WP_072312254.1\|867285_868491_+\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	2.2e-68	39.3
WP_027174632.1\|868502_868943_+	hypothetical protein	NA	NA	NA	NA
WP_072312253.1\|868999_869596_+	hypothetical protein	NA	NA	NA	NA
WP_072312252.1\|869596_869911_+\|head	phage head closure protein	NA	NA	NA	NA
WP_072312251.1\|870110_870320_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	9.8e-17	58.3
WP_072312250.1\|870316_871834_+	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	2.5e-154	54.7
WP_072312249.1\|871830_872058_+	hypothetical protein	NA	NA	NA	NA
WP_072312248.1\|872054_873578_+	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	1.6e-137	53.3
WP_072312247.1\|873574_874753_+	hypothetical protein	NA	NA	NA	NA
WP_072312246.1\|874745_877700_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	3.1e-217	41.1
WP_072312245.1\|877722_879885_+	DNA methyltransferase	Q684G2	Sulfolobus_virus	3.1e-12	24.3
WP_072312244.1\|879884_882536_+	hypothetical protein	NA	NA	NA	NA
WP_072312243.1\|882540_884145_+	AAA family ATPase	NA	NA	NA	NA
WP_096152618.1\|885002_886165_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.2e-24	34.5
WP_157735139.1\|886186_886462_-	hypothetical protein	NA	NA	NA	NA
WP_096152589.1\|887676_888645_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_072312625.1\|888702_888888_-	hypothetical protein	NA	NA	NA	NA
WP_072312624.1\|888928_889195_-	hypothetical protein	NA	NA	NA	NA
WP_072312623.1\|889207_889966_-	ParA family protein	S5VTM9	Leptospira_phage	1.1e-12	34.1
WP_072312622.1\|890221_890506_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_072312621.1\|890526_890961_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_096152583.1\|890943_892089_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096152619.1\|892799_893477_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_096152804.1\|893900_895292_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-11	72.7
WP_096152604.1\|895273_896509_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_096152620.1\|896573_896942_+	hypothetical protein	NA	NA	NA	NA
WP_096152621.1\|897026_898262_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_096152622.1\|898311_898932_-\|tail	tail fiber protein	NA	NA	NA	NA
WP_072312619.1\|898988_899897_-	recombination-associated protein RdgC	NA	NA	NA	NA
WP_157735141.1\|899917_901426_-	hypothetical protein	A0A1X9I6W8	Streptococcus_phage	5.8e-34	31.7
WP_096152624.1\|901528_903031_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	7.3e-13	23.9
WP_096152580.1\|903020_903770_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.5e-35	36.9
WP_072312558.1\|903890_904535_-	P-type conjugative transfer protein TrbJ	NA	NA	NA	NA
WP_072312557.1\|904554_904833_-	conjugal transfer protein TrbD	NA	NA	NA	NA
WP_072312556.1\|904829_905159_-	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_083577998.1\|905142_906144_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA
WP_072312555.1\|906140_906578_-	hypothetical protein	NA	NA	NA	NA
WP_072312554.1\|906582_907317_-	hypothetical protein	NA	NA	NA	NA
WP_096152625.1\|907393_907696_-	hypothetical protein	NA	NA	NA	NA
WP_072312552.1\|907692_908943_-	hypothetical protein	NA	NA	NA	NA
WP_072312551.1\|909166_909511_-	hypothetical protein	NA	NA	NA	NA
WP_072312641.1\|909882_911031_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_143142614.1\|911309_911873_-	bacteriophage CI repressor	NA	NA	NA	NA
WP_072311935.1\|911872_912277_-	single-stranded DNA-binding protein	I3PUY5	Vibrio_phage	2.9e-25	49.6
WP_041724923.1\|912881_914909_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	C7U047	Ostreococcus_tauri_virus	6.9e-107	39.7
WP_096152805.1\|915000_915810_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-15	28.2
WP_041724920.1\|916322_917057_+	TIGR00159 family protein	NA	NA	NA	NA
WP_072311934.1\|917043_917976_+	hypothetical protein	NA	NA	NA	NA
WP_012625335.1\|918035_919388_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_012625334.1\|919453_920326_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	6.2e-65	46.5
WP_012625333.1\|920524_922909_+	primosomal protein N'	NA	NA	NA	NA
WP_012625332.1\|923100_924393_+	TonB-dependent receptor	NA	NA	NA	NA
WP_072311933.1\|924815_927392_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_012625330.1\|927789_928155_-	hypothetical protein	NA	NA	NA	NA
WP_072311932.1\|928241_930989_+	hypothetical protein	NA	NA	NA	NA
WP_072311931.1\|931285_932230_-	permease	NA	NA	NA	NA
WP_096152806.1\|932292_933918_-	benzoylformate decarboxylase	NA	NA	NA	NA
WP_012625326.1\|934196_934544_+	hypothetical protein	NA	NA	NA	NA
WP_072311929.1\|934750_937447_-	magnesium-translocating P-type ATPase	M1HX51	Paramecium_bursaria_Chlorella_virus	4.3e-40	24.0
WP_012625324.1\|937697_937865_-	hypothetical protein	NA	NA	NA	NA
WP_012625323.1\|938285_938825_-	hypothetical protein	NA	NA	NA	NA
WP_072311928.1\|938890_939970_-	hypothetical protein	NA	NA	NA	NA
WP_012625321.1\|940227_940809_+	manganese efflux pump	NA	NA	NA	NA
WP_072311927.1\|940885_941296_+	OsmC family protein	NA	NA	NA	NA
WP_157735144.1\|941644_942115_+	glycosyltransferase	NA	NA	NA	NA
WP_096152626.1\|941832_942621_+	glycosyltransferase	NA	NA	NA	NA
WP_072311925.1\|942983_944339_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	3.6e-19	30.0
WP_012625317.1\|944594_944840_+	cell division protein ZapB	NA	NA	NA	NA
WP_012625316.1\|944846_945119_+	cell division protein ZapA	NA	NA	NA	NA
WP_012625315.1\|945533_947093_+	ribonuclease Y	NA	NA	NA	NA
WP_072311924.1\|947128_947731_+	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|953930_955076_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

961552 : 1023557

Staphylococcus_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152583.1\|961552_962698_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312542.1\|962775_963954_-	hypothetical protein	NA	NA	NA	NA
WP_072312541.1\|964022_964724_-	ERF family protein	A0A0H4A6R9	Pseudoalteromonas_phage	1.3e-25	49.2
WP_072312539.1\|966467_966767_+	immunity protein	NA	NA	NA	NA
WP_072312538.1\|966834_967137_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_143142707.1\|967221_968223_+	hypothetical protein	NA	NA	NA	NA
WP_143142706.1\|968219_969800_+	hypothetical protein	NA	NA	NA	NA
WP_096152632.1\|969821_970963_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	9.1e-40	37.2
WP_072312628.1\|971062_971728_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.0e-39	43.9
WP_072312629.1\|971724_972021_-\|transposase	transposase	NA	NA	NA	NA
WP_083578011.1\|972113_972866_-	DUF4851 domain-containing protein	NA	NA	NA	NA
WP_143142724.1\|972983_973178_-	hypothetical protein	NA	NA	NA	NA
WP_096152634.1\|973260_974229_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.5e-46	36.4
WP_072312568.1\|974225_974978_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_072312567.1\|975102_975915_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-17	33.0
WP_027189484.1\|975983_976841_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_083578000.1\|976843_977644_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_027189486.1\|977640_978636_+	2-hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_084502013.1\|978904_979645_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.5e-35	40.2
WP_072312577.1\|979580_980357_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_072312579.1\|980883_981537_-	hypothetical protein	NA	NA	NA	NA
WP_072312580.1\|981533_983801_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	2.4e-31	32.7
WP_072312535.1\|985772_986174_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_012625292.1\|986177_987260_-	NADH dehydrogenase	NA	NA	NA	NA
WP_012625293.1\|987256_987724_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA
WP_012625294.1\|987742_988300_-	NADH-quinone oxidoreductase subunit B family protein	NA	NA	NA	NA
WP_012625295.1\|988312_989164_-	NADH-quinone oxidoreductase subunit H	NA	NA	NA	NA
WP_041724909.1\|989163_991122_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_072312536.1\|991792_992551_+	hypothetical protein	NA	NA	NA	NA
WP_096152604.1\|992584_993820_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_072312582.1\|993985_994609_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_012625298.1\|994839_995388_+	N-acetyltransferase	NA	NA	NA	NA
WP_012625299.1\|995502_996522_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_072312581.1\|998040_998298_+	hypothetical protein	NA	NA	NA	NA
WP_096152587.1\|998498_999725_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_096152604.1\|999928_1001164_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_096152589.1\|1001247_1002216_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_012625290.1\|1003015_1005130_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_012625289.1\|1005214_1005721_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_012625288.1\|1005876_1006251_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_096152807.1\|1006238_1006790_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA
WP_012625286.1\|1006771_1007332_+	NADH dehydrogenase subunit C	NA	NA	NA	NA
WP_081428297.1\|1007324_1008650_+	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA
WP_012625284.1\|1008731_1009700_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_072312267.1\|1009757_1010462_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_072312276.1\|1010567_1011212_+	NADH-ubiquinone/plastoquinone oxidoreductase chain 6	NA	NA	NA	NA
WP_012625281.1\|1011208_1011511_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_072312268.1\|1011513_1013442_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_072312269.1\|1013460_1014948_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_072312270.1\|1014970_1016485_+	NADH-quinone oxidoreductase subunit N	NA	NA	NA	NA
WP_072312271.1\|1016564_1017815_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_012625275.1\|1018934_1019243_+	hypothetical protein	NA	NA	NA	NA
WP_072312272.1\|1019354_1019957_-	GDYXXLXY domain-containing protein	NA	NA	NA	NA
WP_072312273.1\|1019949_1022226_-	DUF4401 domain-containing protein	NA	NA	NA	NA
WP_096152808.1\|1022381_1023557_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	2.0e-37	37.9

DBSCAN-SWA_3

1062303 : 1071949

Staphylococcus_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012625246.1\|1062303_1064817_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	2.1e-198	44.1
WP_012625245.1\|1064830_1065325_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_012625244.1\|1065328_1065799_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	7.1e-31	45.3
WP_072311596.1\|1065992_1066667_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.8e-26	33.7
WP_012625242.1\|1066673_1067831_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	5.6e-37	32.2
WP_012625241.1\|1067833_1068310_-	cytidine deaminase	G3MA58	Bacillus_virus	1.2e-25	40.8
WP_072311598.1\|1068750_1069995_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	5.9e-93	49.9
WP_072311599.1\|1070393_1071644_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_012625238.1\|1071715_1071949_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	5.1e-06	37.5

DBSCAN-SWA_4

1552403 : 1605969

uncultured_Caudovirales_phage(40.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072312641.1\|1552403_1553552_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_012624750.1\|1554207_1554639_-	ACT domain-containing protein	NA	NA	NA	NA
WP_012624751.1\|1554668_1554878_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_072312602.1\|1555075_1556953_-	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|1557218_1558364_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_083578013.1\|1558360_1559482_-	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|1559474_1560620_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312055.1\|1560697_1561387_-	hypothetical protein	NA	NA	NA	NA
WP_143142625.1\|1561680_1561920_-	hypothetical protein	NA	NA	NA	NA
WP_072312056.1\|1562003_1562258_+	hypothetical protein	NA	NA	NA	NA
WP_072312057.1\|1562276_1562666_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.2e-22	52.3
WP_072312058.1\|1562674_1563001_+	hypothetical protein	A0A2H4J2R0	uncultured_Caudovirales_phage	3.3e-19	41.3
WP_072312072.1\|1563367_1564453_-	DUF3179 domain-containing protein	NA	NA	NA	NA
WP_072312059.1\|1564686_1565574_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_012624758.1\|1565737_1566520_+	sirohydrochlorin cobaltochelatase	NA	NA	NA	NA
WP_072312060.1\|1566528_1567368_+	hypothetical protein	NA	NA	NA	NA
WP_072312061.1\|1567651_1568398_-	6-phosphogluconolactonase	NA	NA	NA	NA
WP_012624761.1\|1568659_1569718_-	hypothetical protein	NA	NA	NA	NA
WP_012624762.1\|1569740_1570481_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_072312062.1\|1570670_1571051_-	RidA family protein	NA	NA	NA	NA
WP_012624764.1\|1571062_1572292_-	tryptophan permease	NA	NA	NA	NA
WP_083577928.1\|1572291_1573362_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_072312063.1\|1575256_1576867_+	DUF4139 domain-containing protein	NA	NA	NA	NA
WP_072312064.1\|1576968_1577622_+	HAD family hydrolase	NA	NA	NA	NA
WP_072312065.1\|1577961_1579149_-	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_072312074.1\|1579220_1580444_-	aspartate kinase	A0A1X9I5D0	Streptococcus_phage	5.4e-06	25.5
WP_012624771.1\|1580515_1581001_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_096152663.1\|1580988_1582593_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_072312067.1\|1582648_1583023_-	holo-[acyl-carrier-protein] synthase	NA	NA	NA	NA
WP_012624774.1\|1583196_1584531_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.5e-78	39.2
WP_072312069.1\|1584895_1586464_+	GAF domain-containing protein	NA	NA	NA	NA
WP_072312070.1\|1587223_1588429_+	ammonium transporter	NA	NA	NA	NA
WP_012624777.1\|1588447_1588786_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_072312071.1\|1588841_1591034_+	glutamine synthetase type III	NA	NA	NA	NA
WP_096152583.1\|1591410_1592556_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_012624779.1\|1592648_1593512_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_072312620.1\|1593532_1594759_+	LL-diaminopimelate aminotransferase	NA	NA	NA	NA
WP_072312641.1\|1595177_1596326_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312526.1\|1596336_1601427_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_012624920.1\|1601758_1604077_+	penicillin-binding protein 1C	NA	NA	NA	NA
WP_096152635.1\|1604272_1604725_-	hypothetical protein	A0A220NQR7	Corynebacterium_phage	8.1e-16	37.6
WP_096152583.1\|1604823_1605969_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1618084 : 1681389

uncultured_virus(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012624909.1\|1618084_1619521_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_072311985.1\|1619719_1620568_-	menaquinone biosynthesis protein	NA	NA	NA	NA
WP_096152665.1\|1620695_1621841_-	dehypoxanthine futalosine cyclase	A9ZMK9	Mamastrovirus	7.3e-29	51.7
WP_012624906.1\|1621837_1622980_-	aminofutalosine synthase MqnE	NA	NA	NA	NA
WP_072311979.1\|1623064_1623922_+	1,4-dihydroxy-6-naphthoate synthase	NA	NA	NA	NA
WP_072311984.1\|1624469_1625912_+	MATE family efflux transporter	NA	NA	NA	NA
WP_012624903.1\|1625968_1627468_-	response regulator	NA	NA	NA	NA
WP_072311978.1\|1627571_1627976_-	hypothetical protein	NA	NA	NA	NA
WP_072311977.1\|1628124_1628739_-	bifunctional nuclease family protein	NA	NA	NA	NA
WP_012624900.1\|1628732_1630097_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_072311976.1\|1630102_1630477_-	hypothetical protein	NA	NA	NA	NA
WP_049757408.1\|1630846_1631374_+	hypothetical protein	NA	NA	NA	NA
WP_041724071.1\|1631418_1631709_-	DUF5334 domain-containing protein	NA	NA	NA	NA
WP_081428285.1\|1631707_1632802_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_012624895.1\|1632912_1633527_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_012624894.1\|1633526_1634510_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	3.7e-05	25.0
WP_012624893.1\|1634757_1635135_+	ACT domain-containing protein	NA	NA	NA	NA
WP_072311975.1\|1635224_1637315_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	9.6e-96	33.3
WP_012624891.1\|1637344_1637785_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096152638.1\|1644929_1646156_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_096152668.1\|1646180_1646885_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.1e-35	40.2
WP_096152669.1\|1647254_1648406_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	3.4e-58	35.6
WP_096152619.1\|1648424_1649102_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_143142646.1\|1649337_1649841_-	hypothetical protein	NA	NA	NA	NA
WP_072312216.1\|1650015_1650474_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_012624603.1\|1650475_1650919_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_012624604.1\|1650953_1651886_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.3e-12	38.3
WP_012624605.1\|1651952_1652492_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_072312217.1\|1652652_1654077_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_012624607.1\|1654383_1656027_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.1e-158	52.3
WP_012624608.1\|1656287_1657097_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_012624609.1\|1657343_1658486_-	nitronate monooxygenase	NA	NA	NA	NA
WP_072312218.1\|1658647_1661650_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_083577946.1\|1661642_1665164_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_012624612.1\|1665388_1666342_-	DMT family transporter	NA	NA	NA	NA
WP_012624613.1\|1666580_1667003_+	hypothetical protein	NA	NA	NA	NA
WP_012624614.1\|1667181_1667607_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_012624615.1\|1667685_1669107_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA
WP_096152638.1\|1669991_1671218_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_072312532.1\|1671214_1671916_-	hypothetical protein	NA	NA	NA	NA
WP_072312533.1\|1672152_1673307_-	cysteine desulfurase NifS	H7BUW1	unidentified_phage	6.8e-43	42.5
WP_012624707.1\|1673311_1674148_-	Fe-S cluster assembly protein NifU	A0A218MKD1	uncultured_virus	3.0e-24	47.1
WP_012624708.1\|1674131_1674575_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_012624709.1\|1674609_1675554_-	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_012624710.1\|1675745_1676468_-	4Fe-4S ferredoxin	NA	NA	NA	NA
WP_012624711.1\|1676470_1677127_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_012624712.1\|1677397_1678291_+	aspartate/ornithine carbamoyltransferase Asp/Orn-binding region	NA	NA	NA	NA
WP_096152583.1\|1678592_1679738_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_157735167.1\|1679815_1680211_-	hypothetical protein	NA	NA	NA	NA
WP_096152589.1\|1680420_1681389_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7

DBSCAN-SWA_6

1710154 : 1743472

Staphylococcus_phage(22.22%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072312106.1\|1710154_1711468_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	2.9e-37	27.5
WP_096152638.1\|1711573_1712800_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_012625085.1\|1713536_1714226_+	MotA/TolQ/ExbB proton channel	NA	NA	NA	NA
WP_072312613.1\|1714228_1714705_+	ExbD/TolR family protein	NA	NA	NA	NA
WP_012625087.1\|1714701_1715379_+	energy transducer TonB	NA	NA	NA	NA
WP_096152589.1\|1715670_1716639_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_096152583.1\|1716863_1718009_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096152671.1\|1718637_1719267_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_157735169.1\|1719202_1719640_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.5e-27	45.0
WP_096152672.1\|1719722_1720046_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157735238.1\|1720046_1720418_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_072312641.1\|1720404_1721553_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072311755.1\|1721651_1721963_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.2e-21	48.9
WP_072311754.1\|1722304_1723900_-	AAA family ATPase	NA	NA	NA	NA
WP_012624844.1\|1723966_1724803_-	ABC transporter permease	NA	NA	NA	NA
WP_012624843.1\|1724802_1725837_-	ABC transporter permease	NA	NA	NA	NA
WP_012624842.1\|1725847_1726375_-	hypothetical protein	NA	NA	NA	NA
WP_012624841.1\|1726392_1727016_-	recombination-associated protein RdgC	NA	NA	NA	NA
WP_072311757.1\|1727634_1728366_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_072311753.1\|1728365_1728794_+	DUF4019 domain-containing protein	NA	NA	NA	NA
WP_072311752.1\|1729117_1730761_-	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA
WP_072311751.1\|1730922_1732350_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	3.4e-20	26.8
WP_012624836.1\|1732364_1733834_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_012624835.1\|1734110_1734788_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_012624833.1\|1737392_1737950_-	elongation factor P	NA	NA	NA	NA
WP_072311749.1\|1738138_1738744_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_072311748.1\|1738757_1740224_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_012624830.1\|1740277_1741009_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_072311747.1\|1741001_1741928_-	FAD-dependent oxidoreductase	A0A2K9L4X0	Tupanvirus	2.7e-58	39.4
WP_012624828.1\|1741924_1742248_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	4.7e-18	43.6
WP_157735170.1\|1742428_1743472_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.2e-66	41.5

DBSCAN-SWA_7

1771585 : 1830615

Staphylococcus_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152673.1\|1771585_1772554_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	9.4e-46	36.7
WP_072312496.1\|1772623_1773649_-	rod shape-determining protein	NA	NA	NA	NA
WP_083577992.1\|1773651_1774689_-	GAF domain-containing protein	NA	NA	NA	NA
WP_072312495.1\|1774960_1776679_+	hypothetical protein	NA	NA	NA	NA
WP_012624798.1\|1776675_1777434_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_012624797.1\|1777430_1778654_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.5e-69	36.9
WP_072312494.1\|1778656_1779490_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_143142695.1\|1779661_1779850_+	hypothetical protein	NA	NA	NA	NA
WP_157735171.1\|1779897_1780065_-	hypothetical protein	NA	NA	NA	NA
WP_096152619.1\|1781592_1782270_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_012624793.1\|1782479_1782800_-	cupin	NA	NA	NA	NA
WP_143142690.1\|1783214_1783676_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_012624791.1\|1783860_1785300_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_012624790.1\|1785373_1785946_+	methylphosphotriester-DNA--protein-cysteine methyltransferase family protein	NA	NA	NA	NA
WP_072312474.1\|1786025_1786526_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	3.4e-23	39.1
WP_083577987.1\|1786503_1787211_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_012624787.1\|1787477_1787987_-	nitroreductase family protein	NA	NA	NA	NA
WP_072312476.1\|1788169_1789315_-	glutamate synthase	NA	NA	NA	NA
WP_072312477.1\|1789337_1790963_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_072312478.1\|1790950_1792057_-	glutamate synthase	NA	NA	NA	NA
WP_143142691.1\|1792161_1792371_+	hypothetical protein	NA	NA	NA	NA
WP_096152674.1\|1793200_1794427_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_096152675.1\|1794462_1795041_+	hypothetical protein	A0A220NQR7	Corynebacterium_phage	1.6e-21	37.5
WP_072312561.1\|1795287_1797408_-	PAS domain-containing protein	NA	NA	NA	NA
WP_012624782.1\|1797416_1798409_-	transglutaminase	NA	NA	NA	NA
WP_012624781.1\|1798934_1800284_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_157735172.1\|1800591_1800768_-	hypothetical protein	NA	NA	NA	NA
WP_096152624.1\|1800832_1802335_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	7.3e-13	23.9
WP_096152580.1\|1802324_1803074_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.5e-35	36.9
WP_083577969.1\|1804023_1804521_-	hypothetical protein	NA	NA	NA	NA
WP_012624859.1\|1804740_1805325_-	hypothetical protein	NA	NA	NA	NA
WP_072312357.1\|1805321_1806137_-	HD domain-containing protein	NA	NA	NA	NA
WP_072312356.1\|1806351_1809834_+	DNA polymerase III subunit alpha	A0A291AVS4	Streptomyces_phage	1.5e-218	37.9
WP_072312355.1\|1809847_1811005_+	hypothetical protein	NA	NA	NA	NA
WP_012624863.1\|1811230_1812313_-	teichoic acid biosynthesis protein	NA	NA	NA	NA
WP_072312354.1\|1812777_1813362_+	hypothetical protein	NA	NA	NA	NA
WP_096152815.1\|1813720_1814464_+	cytochrome c3 family protein	NA	NA	NA	NA
WP_012624866.1\|1814471_1815791_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_012624867.1\|1815790_1816753_+	RnfABCDGE type electron transport complex subunit D	NA	NA	NA	NA
WP_012624868.1\|1816749_1817328_+	FMN-binding protein	NA	NA	NA	NA
WP_012624869.1\|1817354_1818032_+	electron transport complex subunit E	NA	NA	NA	NA
WP_012624870.1\|1818170_1818743_+	electron transport complex protein RnfA	NA	NA	NA	NA
WP_012624871.1\|1818848_1819760_+	Fe-S cluster domain-containing protein	NA	NA	NA	NA
WP_072312352.1\|1819771_1820815_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_096152589.1\|1821224_1822193_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_012624873.1\|1823641_1824952_+	DNA repair exonuclease	NA	NA	NA	NA
WP_072312550.1\|1824951_1829016_+	AAA family ATPase	NA	NA	NA	NA
WP_072312641.1\|1829466_1830615_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1845818 : 1900177

uncultured_virus(28.57%)

transposase,integrase,tRNA

attL 1866042:1866089|attR 1888055:1888102

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072312373.1\|1845818_1846937_-\|integrase	site-specific integrase	Q9AZK8	Lactococcus_phage	1.6e-09	27.2
WP_096152632.1\|1847935_1849076_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	9.1e-40	37.2
WP_072312180.1\|1849077_1849485_+	nucleoside deaminase	S4VYZ2	Pandoravirus	3.7e-20	40.3
WP_012624878.1\|1849844_1850639_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_012624879.1\|1850660_1851431_+	hypothetical protein	NA	NA	NA	NA
WP_072312182.1\|1851923_1853171_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_072312179.1\|1853186_1854944_+	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.2e-32	30.8
WP_012624882.1\|1854943_1855426_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_012624883.1\|1855454_1855808_+	STAS domain-containing protein	NA	NA	NA	NA
WP_072312181.1\|1855854_1856988_+	DUF342 domain-containing protein	NA	NA	NA	NA
WP_072312178.1\|1856984_1858760_+	glycosyltransferase	NA	NA	NA	NA
WP_072312177.1\|1858756_1860172_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_072312176.1\|1860334_1862194_+	flagellar hook-length control protein FliK	NA	NA	NA	NA
WP_072312175.1\|1862219_1863074_+	flagellar hook assembly protein FlgD	NA	NA	NA	NA
WP_072312174.1\|1863185_1865612_+	flagellar hook-basal body complex protein	NA	NA	NA	NA
1866042:1866089	attL	NA	NA	NA	NA
WP_072312173.1\|1866246_1867524_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_072312172.1\|1867894_1869154_+	hypothetical protein	NA	NA	NA	NA
WP_096152677.1\|1869367_1871170_+	MobA/MobL family protein	NA	NA	NA	NA
WP_072312170.1\|1871196_1871553_+	hypothetical protein	NA	NA	NA	NA
WP_096152678.1\|1871839_1872985_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_143142723.1\|1873169_1873463_-	hypothetical protein	NA	NA	NA	NA
WP_096152679.1\|1875250_1876396_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312465.1\|1876727_1876871_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_072312464.1\|1877022_1877673_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_072312463.1\|1877798_1879526_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	6.1e-189	59.7
WP_072312462.1\|1880193_1880937_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_072312461.1\|1880956_1882111_+	sulfotransferase	NA	NA	NA	NA
WP_072312460.1\|1882230_1883727_+	citrate transporter	NA	NA	NA	NA
WP_083577985.1\|1883886_1885743_+	PAS domain-containing protein	NA	NA	NA	NA
WP_072312459.1\|1885918_1886422_-	thiol peroxidase	NA	NA	NA	NA
WP_072312458.1\|1887128_1887854_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_096152638.1\|1889620_1890847_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
1888055:1888102	attR	NA	NA	NA	NA
WP_096152681.1\|1890958_1891636_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_096152682.1\|1891686_1892797_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_096152683.1\|1892940_1893219_+	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|1893654_1894800_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_083578009.1\|1894898_1896515_+	diguanylate cyclase	NA	NA	NA	NA
WP_096152638.1\|1898162_1899389_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_096152684.1\|1899385_1900177_-\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1920097 : 2007306

Tupanvirus(33.33%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152583.1\|1920097_1921243_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_157735176.1\|1921543_1922038_-	hypothetical protein	NA	NA	NA	NA
WP_072311565.1\|1922320_1923112_+	hypothetical protein	NA	NA	NA	NA
WP_012624938.1\|1924346_1925657_+	hypothetical protein	NA	NA	NA	NA
WP_072311567.1\|1925659_1928770_+	ssrAB activated protein	NA	NA	NA	NA
WP_012624940.1\|1928785_1931422_+	type III effector HopL1	NA	NA	NA	NA
WP_072311568.1\|1931425_1932490_+	sel1 repeat family protein	NA	NA	NA	NA
WP_012624942.1\|1932600_1934616_+	VWA domain-containing protein	NA	NA	NA	NA
WP_072311569.1\|1934639_1935452_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.0e-16	32.3
WP_083577884.1\|1935448_1936732_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_096152687.1\|1936721_1938431_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_012624946.1\|1938447_1939353_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_072311570.1\|1939455_1941495_+	1,4-alpha-glucan branching protein	NA	NA	NA	NA
WP_083577885.1\|1941772_1943377_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.4e-09	42.6
WP_012624950.1\|1944389_1944926_-	AAA family ATPase	NA	NA	NA	NA
WP_072311571.1\|1945967_1946426_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_072311572.1\|1946773_1947517_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_157735178.1\|1947618_1948455_-	hypothetical protein	NA	NA	NA	NA
WP_072311574.1\|1948339_1950055_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.9e-21	24.5
WP_083577887.1\|1950051_1951845_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.8e-27	24.1
WP_072311576.1\|1951841_1953167_-	crotonyl-CoA carboxylase/reductase	NA	NA	NA	NA
WP_072311577.1\|1953178_1953922_-	thioesterase	NA	NA	NA	NA
WP_083577888.1\|1953914_1962605_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.4e-47	25.4
WP_072311579.1\|1962601_1965916_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	3.7e-41	22.0
WP_072311580.1\|1965912_1970310_-	type I polyketide synthase	NA	NA	NA	NA
WP_072311581.1\|1970306_1973783_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.8e-54	27.5
WP_072311582.1\|1973772_1975443_-	AMP-binding protein	NA	NA	NA	NA
WP_072311583.1\|1975592_1976813_-	MFS transporter	NA	NA	NA	NA
WP_072311585.1\|1977964_1978918_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-18	30.9
WP_157735179.1\|1978914_1979586_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_157735180.1\|1979537_1979867_-	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_012624969.1\|1979954_1982222_-	TonB-dependent receptor	NA	NA	NA	NA
WP_072311587.1\|1982288_1982723_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_096152816.1\|1983643_1984126_-	hypothetical protein	NA	NA	NA	NA
WP_096152632.1\|1984016_1985157_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	9.1e-40	37.2
WP_157735181.1\|1985018_1986290_-	Isochorismate synthase (salicylate biosynthesis)	NA	NA	NA	NA
WP_012624972.1\|1986282_1986606_-	isochorismate lyase	NA	NA	NA	NA
WP_143142689.1\|1987117_1987375_-	hypothetical protein	NA	NA	NA	NA
WP_096152690.1\|1987437_1988352_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_072312626.1\|1988900_1990397_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_096152583.1\|1990679_1991825_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312127.1\|1991893_1992814_-	DUF2333 family protein	NA	NA	NA	NA
WP_012624975.1\|1993047_1994877_-	SLC13 family permease	NA	NA	NA	NA
WP_083577934.1\|1995573_1997064_-	DUF4125 family protein	NA	NA	NA	NA
WP_012624977.1\|1996996_1997932_-	DUF4037 domain-containing protein	NA	NA	NA	NA
WP_072312128.1\|1998008_1998875_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_012624979.1\|1999320_1999587_-	hypothetical protein	NA	NA	NA	NA
WP_012624980.1\|1999593_2000691_-	membrane protein	NA	NA	NA	NA
WP_012624981.1\|2001558_2002155_+	BMC domain-containing protein	NA	NA	NA	NA
WP_072312129.1\|2002181_2003660_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_072312130.1\|2003719_2006266_+\|holin	choline trimethylamine-lyase	NA	NA	NA	NA
WP_083577935.1\|2006373_2007306_+\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA

DBSCAN-SWA_10

2020805 : 2079047

Staphylococcus_phage(27.27%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152589.1\|2020805_2021774_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_096152691.1\|2022118_2022436_+	hypothetical protein	NA	NA	NA	NA
WP_072312641.1\|2022513_2023662_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312637.1\|2023672_2024224_+	hypothetical protein	NA	NA	NA	NA
WP_157735182.1\|2024906_2025554_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	6.5e-35	40.2
WP_096152583.1\|2025564_2026710_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096152693.1\|2026787_2027144_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012625003.1\|2027321_2028392_+	chemotaxis response regulator protein-glutamate methylesterase	W8CYM9	Bacillus_phage	3.1e-05	28.6
WP_072311902.1\|2028418_2030350_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_072311922.1\|2031177_2032014_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_072311903.1\|2032020_2032797_+	ParA family protein	Q8JL10	Natrialba_phage	9.0e-15	33.7
WP_072311904.1\|2032790_2033528_+	hypothetical protein	NA	NA	NA	NA
WP_012625008.1\|2033790_2034159_+	response regulator	Q56AR1	Bacillus_thuringiensis_phage	1.8e-13	34.1
WP_012625010.1\|2037523_2037733_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_072311923.1\|2037790_2038768_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_012625012.1\|2039244_2039433_-	rubredoxin	NA	NA	NA	NA
WP_012625013.1\|2039459_2039999_-	bacterioferritin	NA	NA	NA	NA
WP_012625014.1\|2040252_2040663_-	transcriptional repressor	NA	NA	NA	NA
WP_072311906.1\|2041804_2042836_-	hypothetical protein	NA	NA	NA	NA
WP_012625017.1\|2042846_2044313_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	A0A0K0KVL9	Prochlorococcus_phage	1.1e-18	39.3
WP_072311907.1\|2044355_2046320_-	glycosyltransferase	G9BWD6	Planktothrix_phage	7.1e-32	38.8
WP_072311908.1\|2046387_2047578_-	ABC transporter permease	NA	NA	NA	NA
WP_072311909.1\|2047842_2049021_-	glycosyltransferase	NA	NA	NA	NA
WP_012625021.1\|2049091_2049769_-	hypothetical protein	NA	NA	NA	NA
WP_072311910.1\|2049931_2051032_-	glycosyltransferase	NA	NA	NA	NA
WP_072311911.1\|2051480_2052494_+	hypothetical protein	NA	NA	NA	NA
WP_072311912.1\|2052493_2053279_+	alkaline phosphatase family protein	NA	NA	NA	NA
WP_072311913.1\|2053401_2054304_+	EamA family transporter	NA	NA	NA	NA
WP_072311914.1\|2054316_2055372_-	M15 family metallopeptidase	NA	NA	NA	NA
WP_072311915.1\|2055431_2056952_+	radical SAM protein	NA	NA	NA	NA
WP_072311916.1\|2057271_2057853_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_012625029.1\|2058071_2058329_+	FmdB family regulatory protein	NA	NA	NA	NA
WP_072311917.1\|2058486_2059368_+	YicC family protein	NA	NA	NA	NA
WP_012625031.1\|2059371_2059626_+	DUF370 domain-containing protein	NA	NA	NA	NA
WP_072311918.1\|2059625_2060234_+	guanylate kinase	G0XXC0	Cowpox_virus	5.0e-21	34.1
WP_072311919.1\|2060308_2061016_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_012625034.1\|2061031_2061889_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_012625035.1\|2061912_2063649_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.2e-61	27.7
WP_072311920.1\|2063874_2065068_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_072311921.1\|2065152_2065554_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_143142612.1\|2065511_2065835_-	hypothetical protein	NA	NA	NA	NA
WP_096152589.1\|2067153_2068122_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_072312641.1\|2069171_2070320_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_012625039.1\|2070546_2072079_-	outer membrane homotrimeric porin	NA	NA	NA	NA
WP_096152587.1\|2072741_2073968_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3
WP_072312612.1\|2075503_2076889_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_012625043.1\|2076912_2077293_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_096152682.1\|2077936_2079047_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

2346991 : 2406137

Staphylococcus_phage(16.67%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072311868.1\|2346991_2348644_+\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_072311867.1\|2348989_2349874_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_012624374.1\|2349881_2350685_+	ABC transporter permease	NA	NA	NA	NA
WP_012624373.1\|2350686_2351208_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_041724701.1\|2351652_2352195_-	peptidyl-prolyl cis-trans isomerase	A0A2H4UTF4	Bodo_saltans_virus	7.9e-10	30.9
WP_012624371.1\|2352584_2353289_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_072311865.1\|2353388_2355947_+	ribonuclease R	NA	NA	NA	NA
WP_012624369.1\|2355946_2357560_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_072311864.1\|2357582_2358110_+	hypothetical protein	NA	NA	NA	NA
WP_072311863.1\|2358310_2358877_-	hypothetical protein	NA	NA	NA	NA
WP_072311862.1\|2359407_2359935_+	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|2360394_2361540_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096152819.1\|2361562_2364793_-	hypothetical protein	NA	NA	NA	NA
WP_072312413.1\|2364888_2368140_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_072312412.1\|2368182_2369505_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_096152820.1\|2369504_2371112_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_072312411.1\|2371195_2371975_-	response regulator transcription factor	W8CYM9	Bacillus_phage	7.1e-20	30.8
WP_072312410.1\|2371979_2372384_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_072312409.1\|2372436_2372820_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_012624360.1\|2373085_2373514_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_012624359.1\|2374556_2375234_-	helix-turn-helix transcriptional regulator	A7Y8H7	Pseudomonas_virus	7.8e-23	35.9
WP_072312408.1\|2375558_2375822_+	hypothetical protein	NA	NA	NA	NA
WP_096152705.1\|2376116_2377266_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	9.2e-40	37.2
WP_072312509.1\|2377371_2377875_+	regulatory protein GemA	A0A2I7S9B8	Vibrio_phage	6.2e-17	39.1
WP_072312510.1\|2377858_2378191_+	hypothetical protein	NA	NA	NA	NA
WP_143142699.1\|2378388_2378769_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_072312512.1\|2378983_2379574_+	hypothetical protein	NA	NA	NA	NA
WP_072312513.1\|2379685_2381191_+	hypothetical protein	T1SBJ2	Salmonella_phage	1.2e-07	31.0
WP_012624343.1\|2381192_2381549_+	hypothetical protein	NA	NA	NA	NA
WP_072312518.1\|2381551_2383621_+	hypothetical protein	W6MWW6	Pseudomonas_phage	1.9e-83	34.0
WP_072312514.1\|2383862_2384321_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_072312515.1\|2384320_2384896_+	hypothetical protein	NA	NA	NA	NA
WP_157735191.1\|2385162_2385375_+	DUF4417 domain-containing protein	NA	NA	NA	NA
WP_072312517.1\|2385374_2385725_+	hypothetical protein	NA	NA	NA	NA
WP_096152645.1\|2385743_2386712_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	9.4e-46	36.7
WP_072312330.1\|2386850_2387291_-	hypothetical protein	NA	NA	NA	NA
WP_072312331.1\|2387308_2387986_-	hypothetical protein	NA	NA	NA	NA
WP_083577962.1\|2387979_2388489_-	hypothetical protein	NA	NA	NA	NA
WP_072312332.1\|2388737_2390126_-	hypothetical protein	NA	NA	NA	NA
WP_072312333.1\|2390532_2391342_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_049757395.1\|2391559_2391997_+	flagellar export protein FliJ	NA	NA	NA	NA
WP_072312335.1\|2392016_2393336_+	hypothetical protein	NA	NA	NA	NA
WP_012624329.1\|2393335_2394115_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_072312336.1\|2394358_2394781_-	hypothetical protein	NA	NA	NA	NA
WP_072312337.1\|2395189_2397631_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.0e-189	47.0
WP_012624325.1\|2398306_2399599_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.5e-118	52.0
WP_012624324.1\|2399601_2400210_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.1e-55	54.3
WP_012624323.1\|2400303_2401662_-	trigger factor	NA	NA	NA	NA
WP_083577961.1\|2402193_2403252_-	selenide, water dikinase SelD	NA	NA	NA	NA
WP_012624321.1\|2403774_2404488_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_096152589.1\|2405168_2406137_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7

DBSCAN-SWA_12

2550685 : 2595902

Enterobacteria_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152808.1\|2550685_2551861_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	2.0e-37	37.9
WP_150083000.1\|2552008_2552242_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_012624195.1\|2552660_2553104_-	cytochrome c3 family protein	NA	NA	NA	NA
WP_012624194.1\|2553549_2554527_-	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_012624193.1\|2554837_2555497_-	formate dehydrogenase subunit beta	NA	NA	NA	NA
WP_083577938.1\|2555546_2558585_-	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
WP_012624191.1\|2559042_2560722_-	trehalose-binding protein	NA	NA	NA	NA
WP_072312146.1\|2560938_2561607_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA
WP_012624189.1\|2561896_2562385_+	CvpA family protein	NA	NA	NA	NA
WP_012624187.1\|2562707_2563505_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_012624186.1\|2563594_2565805_+	hypothetical protein	NA	NA	NA	NA
WP_072312147.1\|2565801_2568180_+	hypothetical protein	NA	NA	NA	NA
WP_072312148.1\|2568969_2569761_+	2-hydroxyglutaryl-CoA dehydratase	NA	NA	NA	NA
WP_012624183.1\|2569806_2570946_+	2-hydroxyacyl-CoA dehydratase	NA	NA	NA	NA
WP_072312149.1\|2571188_2572655_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_072312150.1\|2573029_2573689_-	DUF4956 domain-containing protein	NA	NA	NA	NA
WP_083577939.1\|2573723_2576060_-	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|2576208_2577354_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096152649.1\|2578085_2579231_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096152672.1\|2579356_2579680_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157735238.1\|2579680_2580052_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_072312641.1\|2580038_2581187_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_157735193.1\|2581309_2581990_+	VTC domain-containing protein	NA	NA	NA	NA
WP_072312450.1\|2582169_2582709_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.3e-48	48.4
WP_072312451.1\|2582699_2583593_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.5e-93	57.5
WP_072312452.1\|2583589_2584681_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.3e-83	46.7
WP_072312455.1\|2585307_2586948_-	glycosyltransferase	NA	NA	NA	NA
WP_012624176.1\|2587206_2587743_-	superoxide dismutase family protein	Q9MC02	Salmonella_phage	1.6e-31	45.6
WP_041723854.1\|2587924_2588557_+	RlmE family RNA methyltransferase	NA	NA	NA	NA
WP_012624174.1\|2588590_2589328_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_012624173.1\|2589740_2590556_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.7e-16	26.3
WP_012624172.1\|2591027_2591480_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_012624171.1\|2591482_2592127_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012624170.1\|2592116_2592965_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_072312454.1\|2593354_2594521_-	MFS transporter	NA	NA	NA	NA
WP_096152638.1\|2594675_2595902_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3

DBSCAN-SWA_13

2789505 : 2863854

Staphylococcus_phage(27.27%)

transposase,integrase,tRNA

attL 2803726:2803785|attR 2863808:2864890

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012623996.1\|2789505_2790702_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_072311538.1\|2790877_2791126_-	hypothetical protein	NA	NA	NA	NA
WP_072311529.1\|2791639_2792545_-	hypothetical protein	NA	NA	NA	NA
WP_096152583.1\|2792727_2793873_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_012624000.1\|2794617_2795349_-	hypothetical protein	NA	NA	NA	NA
WP_012624001.1\|2795351_2796614_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_012624002.1\|2796994_2797771_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_012624004.1\|2798273_2799167_-	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_072312482.1\|2799178_2799592_-	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_072312481.1\|2799953_2801642_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.2e-41	31.3
WP_083577988.1\|2801656_2802172_+	hypothetical protein	NA	NA	NA	NA
WP_072312480.1\|2802333_2803275_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_072312479.1\|2803516_2803723_-	YbjN domain-containing protein	NA	NA	NA	NA
2803726:2803785	attL	NA	NA	NA	NA
WP_096152589.1\|2803738_2804707_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
WP_072312398.1\|2804652_2805093_-	hypothetical protein	NA	NA	NA	NA
WP_041723819.1\|2805359_2806184_+	histidinol-phosphatase	NA	NA	NA	NA
WP_072312397.1\|2806570_2807452_+	c-type cytochrome	NA	NA	NA	NA
WP_012624011.1\|2807454_2808834_+	cytochrome c	NA	NA	NA	NA
WP_072312396.1\|2808836_2810444_+	hypothetical protein	NA	NA	NA	NA
WP_012624013.1\|2810752_2811514_-	hypothetical protein	A0A1B1INT3	uncultured_Mediterranean_phage	7.9e-40	56.1
WP_012624014.1\|2811591_2812515_+	GTPase Era	NA	NA	NA	NA
WP_072312395.1\|2812518_2813232_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_012624016.1\|2813375_2814014_+	flagellar basal body-associated FliL family protein	NA	NA	NA	NA
WP_072312393.1\|2814310_2814883_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_083577973.1\|2814887_2815541_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA
WP_096152725.1\|2815584_2816268_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_072312392.1\|2816359_2816629_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_072312391.1\|2817042_2817849_-	RNA methyltransferase	NA	NA	NA	NA
WP_049757389.1\|2818000_2819653_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_072312381.1\|2825553_2826381_-	AAA family ATPase	NA	NA	NA	NA
WP_072312380.1\|2826486_2828382_-	anaerobic carbon-monoxide dehydrogenase catalytic subunit	NA	NA	NA	NA
WP_012624026.1\|2828525_2829203_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_012624027.1\|2829459_2829708_-	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_072312379.1\|2830146_2832963_+\|tRNA	isoleucine--tRNA ligase	A0A2K9L9X8	Tupanvirus	2.7e-77	26.5
WP_096152726.1\|2832996_2833503_+	signal peptidase II	NA	NA	NA	NA
WP_012624030.1\|2833499_2833706_+	hypothetical protein	NA	NA	NA	NA
WP_012624032.1\|2834785_2835421_+	chemotaxis protein CheZ	NA	NA	NA	NA
WP_072312378.1\|2835748_2836573_+	hypothetical protein	NA	NA	NA	NA
WP_012624034.1\|2837233_2838031_+	flagellar hook-basal body protein	NA	NA	NA	NA
WP_012624035.1\|2838134_2838920_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
WP_072312377.1\|2838938_2840189_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
WP_012624037.1\|2840237_2840957_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA
WP_096152682.1\|2841511_2842623_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157735200.1\|2843646_2845452_+\|integrase	tyrosine-type recombinase/integrase	A0A059XK29	uncultured_phage	4.1e-18	30.9
WP_072312388.1\|2845454_2847731_+	AAA family ATPase	NA	NA	NA	NA
WP_143142674.1\|2848159_2848393_+	hypothetical protein	NA	NA	NA	NA
WP_072312386.1\|2848532_2851352_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.6e-45	31.0
WP_072312385.1\|2851424_2851775_-	hypothetical protein	NA	NA	NA	NA
WP_072312384.1\|2851863_2852745_-	hypothetical protein	NA	NA	NA	NA
WP_096152823.1\|2852747_2855225_-	DEAD/DEAH box helicase	A0A160DHD3	Gordonia_phage	1.1e-45	30.4
WP_083577970.1\|2856078_2856639_-	SIS domain-containing protein	NA	NA	NA	NA
WP_072312382.1\|2856714_2857695_-	ADP-glyceromanno-heptose 6-epimerase	A0A2H4N7X9	Lake_Baikal_phage	2.3e-23	31.3
WP_096152728.1\|2857758_2858712_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-42	36.1
WP_143142718.1\|2858822_2859710_-	hypothetical protein	NA	NA	NA	NA
WP_083578006.1\|2859729_2861154_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	A0A0K0KVL9	Prochlorococcus_phage	5.9e-20	42.6
WP_072312592.1\|2861329_2862391_-	hypothetical protein	NA	NA	NA	NA
WP_072312593.1\|2862466_2862796_-	hypothetical protein	NA	NA	NA	NA
WP_096152589.1\|2862885_2863854_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.2e-46	36.7
2863808:2864890	attR	NA	NA	NA	NA

DBSCAN-SWA_14

2884684 : 2930475

uncultured_Caudovirales_phage(18.52%)

tail,head,integrase,terminase,transposase,plate

attL 2901477:2901492|attR 2931119:2931134

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152734.1\|2884684_2885830_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312587.1\|2886014_2886338_-	hypothetical protein	NA	NA	NA	NA
WP_072312586.1\|2886321_2886603_-	hypothetical protein	NA	NA	NA	NA
WP_072312585.1\|2886691_2887324_-	hypothetical protein	NA	NA	NA	NA
WP_083578004.1\|2887659_2888460_-	hypothetical protein	A0A2H4J643	uncultured_Caudovirales_phage	8.4e-16	35.3
WP_096152735.1\|2888752_2890159_+	hypothetical protein	A0A059XK29	uncultured_phage	3.2e-18	30.3
WP_096152634.1\|2890216_2891185_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.5e-46	36.4
WP_157735202.1\|2891120_2891900_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_083577994.1\|2892093_2892378_-	hypothetical protein	NA	NA	NA	NA
WP_072312505.1\|2892491_2893031_-	hypothetical protein	NA	NA	NA	NA
WP_083577993.1\|2893041_2893605_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_072312504.1\|2893869_2894127_-	hypothetical protein	NA	NA	NA	NA
WP_143142697.1\|2894212_2894464_+	hypothetical protein	NA	NA	NA	NA
WP_072312503.1\|2894592_2895843_-\|integrase	site-specific integrase	A0A096VKD7	Synechococcus_phage	8.2e-10	25.6
WP_072312502.1\|2896394_2897312_-\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	1.2e-58	44.5
WP_096152737.1\|2898012_2898345_+	hypothetical protein	NA	NA	NA	NA
WP_072312500.1\|2898469_2899267_-	hypothetical protein	NA	NA	NA	NA
WP_157735203.1\|2899272_2899431_-	hypothetical protein	NA	NA	NA	NA
WP_096152738.1\|2899370_2899796_-	hypothetical protein	NA	NA	NA	NA
WP_096152739.1\|2900245_2901157_-	hypothetical protein	A0A2P1A4E8	Alteromonadaceae_phage	5.3e-06	48.3
WP_072312617.1\|2901165_2901732_-	DUF2313 domain-containing protein	A0A2P9JZK7	Alteromonadaceae_phage	5.0e-23	39.9
2901477:2901492	attL	NA	NA	NA	NA
WP_096152811.1\|2901721_2901856_-	ribonucleoside-triphosphate reductase	NA	NA	NA	NA
WP_072312615.1\|2901891_2902950_-\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	9.6e-60	40.7
WP_072312614.1\|2902952_2903306_-	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	2.2e-32	63.5
WP_096152740.1\|2903375_2904023_-\|plate	phage baseplate assembly protein V	F6MIL4	Haemophilus_phage	3.8e-19	32.9
WP_096152653.1\|2904032_2905127_-	hypothetical protein	A0A2H4J9E6	uncultured_Caudovirales_phage	9.9e-60	37.8
WP_096152741.1\|2905116_2906478_-	hypothetical protein	A0A2H4JGT4	uncultured_Caudovirales_phage	3.6e-27	26.6
WP_083577870.1\|2906483_2908568_-\|tail	phage tail tape measure protein	B5TAA4	Burkholderia_phage	5.5e-51	35.5
WP_072311442.1\|2908727_2909054_-	hypothetical protein	NA	NA	NA	NA
WP_072311441.1\|2909057_2909435_-\|tail	phage tail protein	NA	NA	NA	NA
WP_072311440.1\|2909544_2910006_-	hypothetical protein	NA	NA	NA	NA
WP_072311439.1\|2910144_2911023_-	hypothetical protein	NA	NA	NA	NA
WP_072311438.1\|2911112_2912546_-\|tail	phage tail protein	B7SDP8	Haemophilus_phage	5.6e-87	43.8
WP_072311450.1\|2912549_2912726_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_072311437.1\|2912742_2913435_-	DUF1834 family protein	NA	NA	NA	NA
WP_072311436.1\|2913434_2913887_-	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	8.4e-05	32.0
WP_072311435.1\|2913891_2914200_-	hypothetical protein	NA	NA	NA	NA
WP_072311434.1\|2914208_2915138_-\|head	head protein	A0A1C6ZDN1	Pseudomonas_phage	7.5e-101	58.6
WP_072311433.1\|2915140_2916319_-	hypothetical protein	A0A2D1GNS3	Pseudomonas_phage	6.5e-49	39.6
WP_072311432.1\|2916430_2916976_-	phage virion morphogenesis protein	NA	NA	NA	NA
WP_072311431.1\|2917093_2918389_-	hypothetical protein	Q6QIB9	Burkholderia_phage	3.4e-59	45.8
WP_072311430.1\|2918516_2920106_-	DUF935 domain-containing protein	A0A0M5MS00	Ralstonia_phage	4.0e-94	41.1
WP_072311429.1\|2920108_2921809_-\|terminase	phage terminase large subunit	H6V8N6	Pseudomonas_phage	5.1e-172	54.3
WP_072311428.1\|2921801_2922314_-	DUF1804 family protein	A0A0M3VI86	Ralstonia_phage	1.3e-30	42.8
WP_072311427.1\|2922313_2922565_-	hypothetical protein	NA	NA	NA	NA
WP_072311426.1\|2922579_2922837_-	hypothetical protein	NA	NA	NA	NA
WP_072311425.1\|2922838_2923465_-	hypothetical protein	A0A2I7RBM4	Vibrio_phage	2.8e-06	28.8
WP_083577867.1\|2923567_2924074_-	hypothetical protein	NA	NA	NA	NA
WP_072311424.1\|2924073_2924400_-	DUF4406 domain-containing protein	A0A2K8I958	Pseudomonas_phage	3.5e-21	47.1
WP_072311422.1\|2924828_2925254_-	regulatory protein GemA	A0A2P9JZH5	Alteromonadaceae_phage	7.8e-13	36.6
WP_072311421.1\|2925250_2925718_-	hypothetical protein	NA	NA	NA	NA
WP_072311420.1\|2925671_2925881_-	hypothetical protein	NA	NA	NA	NA
WP_072311419.1\|2925885_2926152_-	hypothetical protein	A0A0U5KSG7	unidentified_phage	3.3e-09	47.3
WP_072311418.1\|2926226_2926757_-	host-nuclease inhibitor protein Gam	NA	NA	NA	NA
WP_072311417.1\|2926758_2927076_-	hypothetical protein	NA	NA	NA	NA
WP_096152825.1\|2927068_2927593_-	hypothetical protein	NA	NA	NA	NA
WP_072311415.1\|2927619_2928363_-	ATP-binding protein	R9U430	Rhizobium_phage	5.4e-33	36.5
WP_072311414.1\|2928378_2930475_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2H4JEQ4	uncultured_Caudovirales_phage	4.1e-94	37.4
2931119:2931134	attR	NA	NA	NA	NA

DBSCAN-SWA_15

3053803 : 3106156

Bacillus_thuringiensis_phage(16.67%)

transposase,tail,tRNA,integrase

attL 3056253:3056269|attR 3092414:3092430

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152604.1\|3053803_3055039_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_143142680.1\|3055068_3055407_-	hypothetical protein	NA	NA	NA	NA
WP_072312416.1\|3055378_3056503_+	P-type conjugative transfer protein TrbL	NA	NA	NA	NA
3056253:3056269	attL	NA	NA	NA	NA
WP_072312417.1\|3056506_3056833_+	hypothetical protein	NA	NA	NA	NA
WP_072312418.1\|3056885_3057629_+	type IV secretion system protein	NA	NA	NA	NA
WP_072312419.1\|3057638_3058532_+	P-type conjugative transfer protein TrbG	NA	NA	NA	NA
WP_083577978.1\|3058561_3059749_+	hypothetical protein	NA	NA	NA	NA
WP_072312421.1\|3059868_3061899_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_072312422.1\|3061895_3062420_+	conjugative transfer signal peptidase TraF	NA	NA	NA	NA
WP_096152751.1\|3062439_3062958_+	hypothetical protein	NA	NA	NA	NA
WP_072312423.1\|3062944_3065080_+	DUF1738 domain-containing protein	A0A2D1GN57	Marinobacter_phage	1.4e-41	41.2
WP_072312424.1\|3065076_3067236_+	type I DNA topoisomerase	A0A1V0SB35	Catovirus	2.9e-71	32.9
WP_072312425.1\|3067532_3068396_+	hypothetical protein	NA	NA	NA	NA
WP_072312426.1\|3068407_3069286_+	recombination-associated protein RdgC	NA	NA	NA	NA
WP_096152752.1\|3069334_3069943_+\|tail	tail fiber protein	A0A7D3	Microcystis_virus	6.6e-05	47.8
WP_096152753.1\|3070423_3071320_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-36	35.1
WP_096152754.1\|3072701_3074465_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.2e-19	51.2
WP_096152755.1\|3074680_3075334_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_096152756.1\|3075400_3076504_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_072312122.1\|3076976_3077219_+	hypothetical protein	NA	NA	NA	NA
WP_143142630.1\|3077193_3077757_+	hypothetical protein	NA	NA	NA	NA
WP_072312126.1\|3077821_3079321_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_157735211.1\|3079338_3079548_-	hypothetical protein	NA	NA	NA	NA
WP_072312120.1\|3079644_3079980_-	conjugal transfer protein TraJ	NA	NA	NA	NA
WP_072312119.1\|3079979_3080834_-	Rha family transcriptional regulator	A0A0P0ZGC2	Escherichia_phage	8.1e-25	56.0
WP_072312118.1\|3081500_3083153_-\|integrase	site-specific integrase	A0A1S5NNJ1	Burkholderia_phage	5.8e-11	27.1
WP_012623853.1\|3083806_3084076_+	DUF5320 domain-containing protein	NA	NA	NA	NA
WP_072312125.1\|3084477_3084765_+	DUF134 domain-containing protein	NA	NA	NA	NA
WP_012623851.1\|3084848_3085322_-	YbaK/EbsC family protein	NA	NA	NA	NA
WP_012623850.1\|3085436_3085865_-	DMT family transporter	NA	NA	NA	NA
WP_072312124.1\|3086177_3086630_-	glyoxalase	NA	NA	NA	NA
WP_072312117.1\|3086763_3087720_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_072312116.1\|3087850_3088174_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_072312115.1\|3088297_3088984_+	endonuclease III	NA	NA	NA	NA
WP_072312114.1\|3089277_3090231_+	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	5.6e-51	35.9
WP_012623844.1\|3091332_3092904_+	MFS transporter	NA	NA	NA	NA
3092414:3092430	attR	NA	NA	NA	NA
WP_012623843.1\|3093025_3093817_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA
WP_072312113.1\|3094078_3095470_-\|tRNA	glutamate--tRNA ligase	A0A1V0SK72	Klosneuvirus	1.0e-08	29.6
WP_072312111.1\|3095705_3097706_-	PAS domain-containing hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	2.0e-50	35.5
WP_072312110.1\|3097952_3098735_+	acetylglutamate kinase	NA	NA	NA	NA
WP_072312109.1\|3098850_3100308_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_096152827.1\|3100442_3101048_-	HD domain-containing protein	NA	NA	NA	NA
WP_096152757.1\|3101450_3102824_-	sigma-54-dependent Fis family transcriptional regulator	Q56AR1	Bacillus_thuringiensis_phage	7.2e-07	36.1
WP_143142631.1\|3102882_3104391_-	two-component system sensor histidine kinase ZraS	W8CYF6	Bacillus_phage	7.6e-18	28.2
WP_083577932.1\|3104627_3105044_+	periplasmic heavy metal sensor	NA	NA	NA	NA
WP_096152706.1\|3105475_3106156_+\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

3127475 : 3173515

Erysipelothrix_phage(30.0%)

transposase,integrase

attL 3142009:3142032|attR 3173099:3173122

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096152583.1\|3127475_3128621_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312569.1\|3128999_3129776_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.6e-22	30.4
WP_012623821.1\|3129772_3130453_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_072312570.1\|3130641_3131394_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_072312571.1\|3131549_3132674_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_072312641.1\|3133266_3134415_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312601.1\|3136359_3136740_-	DUF488 family protein	NA	NA	NA	NA
WP_072312600.1\|3136945_3137974_-	MFS transporter	NA	NA	NA	NA
WP_096152583.1\|3137992_3139138_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072312633.1\|3139583_3139796_-	hypothetical protein	NA	NA	NA	NA
WP_072312634.1\|3140141_3140759_+	hypothetical protein	NA	NA	NA	NA
WP_096152604.1\|3140740_3141976_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
3142009:3142032	attL	NA	NA	NA	NA
WP_072312519.1\|3143109_3143703_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5S8G1	Streptococcus_phage	3.8e-21	37.4
WP_072312520.1\|3143904_3144318_-	hypothetical protein	NA	NA	NA	NA
WP_072312521.1\|3144407_3144674_-	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_072312522.1\|3145159_3145480_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_072312523.1\|3145492_3146350_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_072312524.1\|3146761_3148006_+\|integrase	site-specific integrase	K7PHM9	Enterobacterial_phage	6.7e-12	27.8
WP_072312525.1\|3148032_3149055_+	hypothetical protein	NA	NA	NA	NA
WP_096152759.1\|3149379_3149541_-	hypothetical protein	NA	NA	NA	NA
WP_096152760.1\|3149797_3151528_-	VWA domain-containing protein	A0A2D0Z996	Vibrio_phage	1.4e-12	27.3
WP_096152761.1\|3151433_3152471_-	DUF3150 domain-containing protein	NA	NA	NA	NA
WP_096152762.1\|3152480_3153824_-	AAA domain-containing protein	L7TKP0	Rhizobium_phage	8.8e-34	35.3
WP_072312327.1\|3153893_3154322_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_072312326.1\|3154324_3154546_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_072312325.1\|3154679_3155843_-	hypothetical protein	NA	NA	NA	NA
WP_072312324.1\|3155911_3156613_-	ERF family protein	A0A0H4A6R9	Pseudoalteromonas_phage	5.1e-25	50.0
WP_072312323.1\|3157029_3160194_-	DEAD/DEAH box helicase family protein	A0A2K5B2C2	Erysipelothrix_phage	9.7e-116	32.9
WP_096152763.1\|3160190_3161228_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	1.5e-73	44.6
WP_072312322.1\|3161224_3163300_-	site-specific DNA-methyltransferase	A0A2K5B255	Erysipelothrix_phage	2.3e-81	30.5
WP_072312321.1\|3163304_3164192_-	hypothetical protein	NA	NA	NA	NA
WP_072312320.1\|3164242_3164908_-	DUF4391 domain-containing protein	NA	NA	NA	NA
WP_072312319.1\|3164904_3168171_-	DEAD/DEAH box helicase family protein	A0A2K5B253	Erysipelothrix_phage	3.0e-237	42.8
WP_072312318.1\|3168587_3170318_+	AAA family ATPase	NA	NA	NA	NA
WP_072312317.1\|3170304_3171723_+	AAA family ATPase	NA	NA	NA	NA
WP_096152764.1\|3171857_3173093_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_096152765.1\|3173290_3173515_+\|transposase	transposase	NA	NA	NA	NA
3173099:3173122	attR	NA	NA	NA	NA

DBSCAN-SWA_17

3214825 : 3267062

Moumouvirus(12.5%)

transposase,integrase,tRNA,protease

attL 3209012:3209026|attR 3227142:3227156

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3209012:3209026	attL	NA	NA	NA	NA
WP_072311705.1\|3214825_3216190_+\|tRNA	asparagine--tRNA ligase	M1PB22	Moumouvirus	1.7e-80	38.0
WP_072311704.1\|3216678_3217725_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015939276.1\|3217790_3218753_+	aminotransferase	NA	NA	NA	NA
WP_157735215.1\|3218752_3219682_+	hypothetical protein	NA	NA	NA	NA
WP_157735217.1\|3219597_3220095_+	glycosyltransferase	NA	NA	NA	NA
WP_015939278.1\|3220155_3221067_+	adenine nucleotide alpha hydrolase family protein	NA	NA	NA	NA
WP_157735219.1\|3221315_3221453_-	hypothetical protein	NA	NA	NA	NA
WP_072311702.1\|3221627_3222776_+\|integrase	site-specific integrase	A0A173G9H3	Propionibacterium_phage	1.5e-05	23.5
WP_157735221.1\|3222772_3223816_+	hypothetical protein	NA	NA	NA	NA
WP_072311700.1\|3223994_3224201_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_096152772.1\|3224449_3224758_+	hypothetical protein	NA	NA	NA	NA
WP_096152773.1\|3224831_3226301_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_096152774.1\|3226503_3226896_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	6.1e-20	43.3
WP_096152775.1\|3227185_3227899_+	hypothetical protein	NA	NA	NA	NA
3227142:3227156	attR	NA	NA	NA	NA
WP_096152776.1\|3227829_3228531_+	hypothetical protein	NA	NA	NA	NA
WP_072312563.1\|3228706_3229363_+	RICIN domain-containing protein	NA	NA	NA	NA
WP_143142714.1\|3229609_3230212_+	hypothetical protein	NA	NA	NA	NA
WP_096152604.1\|3231915_3233151_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_157735223.1\|3233536_3234157_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_096152778.1\|3234203_3234689_+	hypothetical protein	NA	NA	NA	NA
WP_083577926.1\|3235041_3235338_+	hypothetical protein	NA	NA	NA	NA
WP_072312017.1\|3235687_3236203_+	BREX-3 system P-loop-containing protein BrxF	NA	NA	NA	NA
WP_072312018.1\|3236981_3237596_+	DUF1819 family protein	NA	NA	NA	NA
WP_072312035.1\|3237613_3238204_+	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_096152779.1\|3238215_3241767_+	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_072312020.1\|3241851_3242712_+	DNA damage-inducible protein D	A0A2P1JVY7	Mycobacterium_phage	5.3e-24	44.4
WP_072312021.1\|3242711_3246203_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_072312022.1\|3246215_3248714_+	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_072312023.1\|3248728_3250798_+\|protease	BREX system Lon protease-like protein BrxL	NA	NA	NA	NA
WP_072312024.1\|3250799_3253376_+	AAA family ATPase	NA	NA	NA	NA
WP_072312025.1\|3253380_3254610_+	exonuclease subunit SbcD	NA	NA	NA	NA
WP_072312026.1\|3254621_3257897_+	AAA family ATPase	A0A0E3FCH5	Synechococcus_phage	1.5e-07	27.0
WP_072312027.1\|3257898_3258210_+	hypothetical protein	NA	NA	NA	NA
WP_072312028.1\|3258315_3259356_+\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	1.1e-143	72.1
WP_072312029.1\|3259498_3260548_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_072312030.1\|3260798_3261650_+	hypothetical protein	NA	NA	NA	NA
WP_072312031.1\|3261659_3263045_+	hypothetical protein	NA	NA	NA	NA
WP_072312036.1\|3263083_3263515_+	hypothetical protein	NA	NA	NA	NA
WP_072312032.1\|3263733_3264435_+	ERF family protein	A0A2H4FU11	Methylophilaceae_phage	6.2e-23	42.5
WP_096152780.1\|3264503_3265667_+	hypothetical protein	NA	NA	NA	NA
WP_096152587.1\|3265835_3267062_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.9e-51	47.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023415

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection