CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP014598	Prevotella intermedia strain OMA14 chromosome II	3 crisprs	cas13b,Csx28,DEDDh,PD-DExK	0	1	2	2
NZ_AP014597	Prevotella intermedia strain OMA14 chromosome I	2 crisprs	PD-DExK,cas3,WYL,cas2,cas1,DEDDh	2	17	1	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP014598_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014598_1

151557-152054

TypeVI-B1,TypeVI-B2

VI-B2

Consensus_repeat	Method
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAA	PILER-CR
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	CRT

7 spacers

Csx28,cas13b

The CRISPR arrays of NZ_AP014598_1

>merge|NZ_AP014598|1|151557-152054|PILER-CR,CRT
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACACCAGACATATGATGTTTTTCCAAGAACAAGTTGTATCTGCCTGCTGTTTGCAAGGTAAAAACAATGAACTGTAGACTTTCATCGCCTACGAGCAAGTTGTATCTGCCTGCTGTTTGCAAGGTAAAAACAATCAACACGGCGCATCTTGTAGACGTTTGAAAGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACTTGATATATCGCACGATGTTTGAATTTCGAGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACTCACACATTGGGGAAGAGTTCTTTTTCGGAGTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAACCCGTGGTATGGTATCCACTTTGTCCATTGCGTTGCATCTGCCTGCTGTTTGCAAGGTACAAACAACTTTTATCGGGTATTCTGGAGCTTAAACTTTGTTGCATCTGCCTGCTGTATGCAAGGCACAAACAAC

>NZ_AP014598|1|1|151557-151987|PILER-CR
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAA	CACCAGACATATGATGTTTTTCCAAGAACAA
GTTGTATCTGCCTGCTGTTTGCAAGGTAAAAACAA	TGAACTGTAGACTTTCATCGCCTACGAGCAA
GTTGTATCTGCCTGCTGTTTGCAAGGTAAAAACAA	TCAACACGGCGCATCTTGTAGACGTTTGAAA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAA	CTTGATATATCGCACGATGTTTGAATTTCGA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAA	CTCACACATTGGGGAAGAGTTCTTTTTCGGA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAA	CCCGTGGTATGGTATCCACTTTGTCCATTGC
GTTGCATCTGCCTGCTGTTTGCAAGGTACAAACAA

>NZ_AP014598|1|1|151557-152054|CRT
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	ACCAGACATATGATGTTTTTCCAAGAACAA
GTTGTATCTGCCTGCTGTTTGCAAGGTAAAAACAAT	GAACTGTAGACTTTCATCGCCTACGAGCAA
GTTGTATCTGCCTGCTGTTTGCAAGGTAAAAACAAT	CAACACGGCGCATCTTGTAGACGTTTGAAA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	TTGATATATCGCACGATGTTTGAATTTCGA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	TCACACATTGGGGAAGAGTTCTTTTTCGGA
GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	CCGTGGTATGGTATCCACTTTGTCCATTGC
GTTGCATCTGCCTGCTGTTTGCAAGGTACAAACAAC	TTTTATCGGGTATTCTGGAGCTTAAACTTT
GTTGCATCTGCCTGCTGTATGCAAGGCACAAACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014598.1\|WP_096408012.1\|159253_161452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_AP014598.1\|WP_096408038.1\|168691_170647_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|235057
NZ_AP014598.1\|WP_148664619.1\|165224_167258_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096407975.1\|138567_139527_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096409401.1\|132109_132901_-\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_AP014598.1\|WP_088439823.1\|131439_131904_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_AP014598.1\|WP_172419474.1\|150941_151487_+\|hypothetical-protein	Csx28	-	unknown
NZ_AP014598.1\|WP_172419473.1\|147520_150922_+\|hypothetical-protein	cas13b	cas13b_CAS_V-B1	gnl\|CDD\|380475
NZ_AP014598.1\|WP_096408003.1\|156622_157423_+\|KilA-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|367917
NZ_AP014598.1\|WP_096409404.1\|168088_168598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096407980.1\|145756_146173_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096407985.1\|146349_147243_+\|DUF481-domain-containing-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096408021.1\|162328_164617_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_AP014598.1\|WP_096407998.1\|152870_155891_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_AP014598.1\|WP_096407961.1\|133136_135383_-\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
NZ_AP014598.1\|WP_096407967.1\|136408_137641_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096408043.1\|170662_171853_-\|DUF2027-domain-containing-protein	unknown	unknown	gnl\|CDD\|370595
NZ_AP014598.1\|WP_096408007.1\|157583_159101_-\|DUF4301-family-protein	unknown	unknown	gnl\|CDD\|372920
NZ_AP014598.1\|WP_096407971.1\|137646_138555_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NZ_AP014598.1\|WP_096408017.1\|161574_162192_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NZ_AP014598.1\|WP_096408012.1\|159253_161452_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_AP014598.1\|WP_096408038.1\|168691_170647_-\|NAD(+)-synthase	gnl\|CDD\|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NZ_AP014598.1\|WP_096409401.1\|132109_132901_-\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	2.39426e-116
NZ_AP014598.1\|WP_088439823.1\|131439_131904_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	2.11412e-70
NZ_AP014598.1\|WP_096408021.1\|162328_164617_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_AP014598.1\|WP_096407971.1\|137646_138555_+\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	3.64472e-07
NZ_AP014598.1\|WP_172419473.1\|147520_150922_+\|hypothetical-protein	gnl\|CDD\|380475	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins. CRISPR-Cas (clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins) adaptive immune systems defend microbes against foreign nucleic acids via RNA-guided endonucleases. These systems are divided into two classes: class 1 systems utilize multiple Cas proteins and CRISPR RNA (crRNA) to form an effector complex while class 2 systems employ a large, single effector with crRNA to mediate interference. Class 2 type VI CRISPR-Cas13 systems use a single enzyme to target RNA using a programmable crRNA guide and are divided into four subtypes based on the identity of the Cas13 protein (Cas13a-d). The Cas13 proteins are capable of both pre-crRNA processing and target RNA cleavage, which protect the host from phage attacks. Once bound to a target RNA, their non-specific RNase activity is activated. Cas13b has many distinctive features compared to the other Cas13 proteins, including the lack of significant sequence similarity, disparate crRNA repeat region, and double-sided protospacer flanking sequence (PFS)-dependent target RNA cleavage.	0
NZ_AP014598.1\|WP_096407998.1\|152870_155891_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	4.93935e-05
NZ_AP014598.1\|WP_096407961.1\|133136_135383_-\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_AP014598.1\|WP_096408003.1\|156622_157423_+\|KilA-N-domain-containing-protein	gnl\|CDD\|367917	pfam04383, KilA-N, KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	1.44238e-17
NZ_AP014598.1\|WP_096408043.1\|170662_171853_-\|DUF2027-domain-containing-protein	gnl\|CDD\|370595	pfam09640, DUF2027, Domain of unknown function (DUF2027). This protein domain is of unknown function. though putatively involved in DNA mismatch repair. It is associated with pfam01713.	7.21281e-67
NZ_AP014598.1\|WP_096408007.1\|157583_159101_-\|DUF4301-family-protein	gnl\|CDD\|372920	pfam14134, DUF4301, Domain of unknown function (DUF4301). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 505 and 516 amino acids in length.	0
NZ_AP014598.1\|WP_096408017.1\|161574_162192_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.87632e-12

>NZ_AP014598.1|WP_172419474.1|150941_151487_+|hypothetical-protein
MSKEVATALFSTISSLIPIVIAAYLTYRYAIKKLRKESFENIERAKYEAILNAHQSIYKLLRYITDTENDDCILVWEQPKGGREKTYYFKQANIRKFIKELTEEIYNKGNGIYLSKEVMSLIFKYRTLVHKLLLAKKNNPDEKIMIDKRKLAKRMIEIHQSLSIQIRKDINLKQRDLQFDS
>NZ_AP014598.1|WP_172419473.1|147520_150922_+|hypothetical-protein
MEDDKKTTDSISYELKDKHFWAAFLNLARHNVYITVNHINKVLELKNKKDQDIIIDNDQDILAIKTHWEKVNGDLNKTERLRELMTKHFPFLETAIYSKNKEDKEEVKQEKQAKAQSFDSLKHCLFLFLEKLQETRNYYSHYKYSESTKEPMLEKELLKKMYNIFDDNIQLVIKDYQHNKDINPDEDFKHLDRTEEDFNYYFTRNKKGNITESGLLFFVSLFLEKKDAIWMQQKLRGFKDNRESKKKMTHEVFCRSRMLLPKLRLESTQTQDWILLDMLNELIRCPKSLYERLQGEDREKFKVPFDPADEDYDAEQEPFKNTLVRHQDRFPYFALRYFDYNEIFTNLRFQIDLGTFHFSIYKKLIGGQKEDRHLTHKLYGFERIQEFAKQNRPDEWKAIVKDLDTYETSNERYISETTPHYHLENQKIGIRFRNDNDEIWPSLKTNGENNEKSKYKLDKQYQAEAFLSVHELLPMMFYYLLLKKEEPNNDKKNASIVEGFIKREIRDMYKLYDAFANGEINNIDDLEKYCEDKGIPKRHLPKQMVAILYDEHKDMVKEAKRKQRKMVKDTEKLLAALEKQTQEKTEDGGRNIRLLKSGEIARWLVNDMMRFQPVQKDNEGNPLNNSKANSTEYQMLQRSLALYNKEEKPTRYFRQVNLINSSNPHPFLKWTKWEECNNILSFYRSYLTKKIEFLNKLKPEDWEKNQYFLKLKEPKTNRETLVQGWKNGFNLPRGIFTEPIREWFKRHQNDSKEYEKVEALDRVGLVTKVIPLFFKKEDSKDKEEDLKKDAQKEINNCVQPFYSFPYNVGNIHKPDEKDFLHREERIELWDKKKDKFKGYKAKVKSKKLTDKEKEEYRSYLEFQSWNKFERELRLVRNQDIVTWLLCTELIDKLKVEGLNVEELKKLRLKDIDTDTAKQEKNNILNRVMPMQLPVTVYEIDDSHNIVKDRPLHTVYIEETKTKLLKQGNFKALVKDRRLNGLFSFVDTSSEAELKSNPISKSLVEYELGEYQNARIETIKDMLLLEETLIEKYKNLPTDNFSDMLNGWLEGKDEADKARFQNDVKLLVAVRNAFSHNQYPMRNRIAFANINPFSLSSADTSEEKKLDIANQLKDKTHKIIKRIIEIEKPIETKE
>NZ_AP014598.1|WP_096407985.1|146349_147243_+|DUF481-domain-containing-protein
MIKEKGLKHPNYDEKNGNIFFYLFAFLFQQAHNKKVYAKRCAYMLICIMASLPAQAQMLFSENLTMSIDSAKTIQGSLQPVVDFKTEKENILTLKNTANLNLLIKRNRVVNLINKLEFSTYGKEITVSGGYVHAEYRYLLQHAFEIYPYVESQWAGSRGMTFKISTGLQSRYRLMNTEHSLMFAAIGLFYEFEKWEYPDPPAGTNPHAYSRSVKSHLSLSYRLSLGEHWEITATAIHQAKPDSYFKSARFGGAVDLAYRITPKIGVRGTYRLIYDTAPIVPIRKNYTAVDAGIDISF
>NZ_AP014598.1|WP_096407980.1|145756_146173_-|hypothetical-protein
MKRLFLIGIMALAAVSGFAQDVNRVDKLKEQQKVLDLTSKLNKLQLDLEKEKATYNDLVNKASEVNAEANVVTTEFNSSDAKSTVKDAKETIKVLKEAKAVNKKLKKAQKKTSKMEKKIAKLQARIDDLNKRVKFVDQ
>NZ_AP014598.1|WP_096407975.1|138567_139527_+|hypothetical-protein
MWYLEKPSEKDLNSYKELFYEKIKNKVDKKIEKDSCFKILLEEDNIEKLLISEPEELYELNKDLMKEITGYYPDDPVEYKGNYKVKKLQEIFNYNTLISGNKDNSYKIAEIKGRNTCTYCNRQYTITLKKDGEFITRPQFDHWFPKSIFPLLALSFYNLIPSCSICNSSAKGDQIFSFEELIHPYKRSSPETDFKFSYLPDGEGRWKIDLYNLKGIEKDTFKAFKLKNIYNYHYKLEAKDLLDLAIKNNGTYIEWLLNDMKEKEIAPSYEEAYRLLFGTEYDIKKVLDRPFSKLKRDLVIAISELNPNIAILEYLNKEK
>NZ_AP014598.1|WP_096407971.1|137646_138555_+|AAA-family-ATPase
MCNDTSHITKKIRQCFLHLLYNTFGLKPEGETVIKINKAEGRIKDYLQKSKELSDKPFFKNISIDDLLPPPIFSIEIILKDKNKLNSNNVPFNTLSSGERQQAFSISSALYHLANIESVHNDENNERVRYSNALIIFEEVELYFHPQLQKQLIKNLLDGIKQMHFKHIKSIQIIFVTHSPFILSDIPTENILALKKDCTETKELKTFSANIYDILNTSFFMEEGAIGDYAQWIIQFIVKCFEDRQSISPEDLLELISLIDEPLYHKVLMQKFYEKYPNQTPLSKKIEELEMQLDALKKQQNK
>NZ_AP014598.1|WP_096407967.1|136408_137641_+|hypothetical-protein
MENKTKNSQSNTISATETTNFQLIAIKVNKDKTIGQRKLTANKPYFFSEGYEITNNVLTIKEENKISSNIYNLFIKDEKEQQPSISTNAIVGENGSGKSTIVEYVIRLINNLSAAIFGERFSNPAAEHLHYIEGMDGELWYLVDNKAVRLVVNGRKVNLFSYTKNKKGKRFCNAPLPLSNEKTDSLIPMKPLSLDKLKEFIPSLFYTLVSNYSIYAYNSVDYLDENNSIKLERKIRGKVTNAKYECNWLSGIFHKNDGYQSPIVLTPYREEGNININTEKQLSKERLISLLLMDSKYYRTINGHLDVIGLKIIKNKKSKNRKTLKEEGLYHLTENGFKNIKKRIIELWIEKIGISKEEIENNNYKEEISTYIAYKTLKIASRYKQYSNIFYTKQHQRMYSRFDEGLLKNS
>NZ_AP014598.1|WP_096407961.1|133136_135383_-|formate-C-acetyltransferase
MREEWRGFSGTKWLDEVNMREFIQANYTGYDGDAEFLANPTEATNKLWGKLKELQKEERAKGGVLDMETEIVSSATAYGAGYIDESMKDLEKVVGLQTDKPLKRAFMPYGGIKMAEQACTTYGYQPSEKLHEIFTKYCKTHNEGVFDAYTDEMKIVRHNHILTGLPDTYGRGRIVGDYRRVALYGVDFLIEEKQKDLRNCGDGVMVDDVIRLREEISMQIKALYEMKEMAKIYGYDISNPANNAREAVQWLYFGYLSAIKTQNGAAMSVGRISTFLDIYINRDFQEGTLTEAEAQELIDHIVMKFRMVKFARIPSYNQLFSGDPVWATLEVAGLGMDGRHMVTKNDFRFLHTLENMGPSPEPNLTVLYSPALPEGFKKYAAKISVKTSSIQYENDEVMRPVWGDDYSICCCVSATQTGKEMQFFGARANLAKCLTYAISGGVDHKTREQCGPALRPIEGDVVTYEEFMPKFMDMMEWLADIYVNTLNLIHYMHDKYFYEAAELALIDTDVRRTFATGIAGFSHVVDSICAIKYAKVKIVRDETGFPLDFETEGEFPRYGNDDERADEVAVWLLKTFMTMIRKHHTYRNSEPTTSILTITSNVVYGKYTPAMPDGRPSGAPLAPGANPSYGAEQNGLLASLNSVAKLPYEYALDGISNTQTIAPSTLGKDDEERTNTLVGVMDGYFSRGAHHLNVNVFGVEKLIDAMEHPEKEEYANFTIRVSGYAVKFIDLTREQQEDVIARQAHGKM
>NZ_AP014598.1|WP_096409401.1|132109_132901_-|pyruvate-formate-lyase-activating-protein
MTEQIPTIEYNTENTERADGKKLARVHSIESFGSVDGPGIRFIVFLKGCTMRCQYCHNPDTWDTHSDQLMTADELLAKAIRFKSYWGANGGITVSGGESLLQMDFLIEFFRKAKAQGVHTCLDTSAQPFRRTGAFFEKFEELMQYTDLLLFDIKHIDTDEHKKLTGWGNENILDCARYLSEIGKPVWIRHVLVPTITDKDEYLLRLRDFIASLTNVEKIEVLPYHTLGIYKWENLNMPYALKGIPEPTPEQVQHAQQILEGKA
>NZ_AP014598.1|WP_088439823.1|131439_131904_+|MaoC-family-dehydratase
MEKLIVNNYEELASYLGKKLGESEWLEVNQERINLFADATLDHQWIHVDAERAAKESAYKTTIAHGYLTLSLLPHMWNQTIEVHNLKMMVNYGMDKMRFGRPVLVDSRIRLVSWLESIENLRGICKAGIKFQIEIEGERKPALEGVATFLYYFE
>NZ_AP014598.1|WP_096407998.1|152870_155891_-|T9SS-type-A-sorting-domain-containing-protein
MKKHYLLVLFLFFFCGMQADEVKVLEENTFSLAISPNGKYLVGYNPTKVKSGVGTESFLYDVGSGSLKWVTTDDPEHWKTCGLFKDVNDAGTLCGSVKDLDHVIDFYGTSAPTNIAAILENGKVVKLPYGDLDMKKIKQHEDGTFAAALSNDGNVVVGYCKCSNFAFSYPCKWTRGANNEWKMEQLPLPESYKYGLAINVSSDGRTIVGLAIEGGRAIACYWIDGKCYTVNCTNEDAELAKMKQMRMIDMSPNGKYFIFSLSSRSDYRLFDVEKGTYRVLPTFERNETMRIPTVADNGDVFGAITYSTAGMGEVSYRSFWYQYSSDRIFDFTYYLYLFNPQLTIPFPLNYEDQAQAFPSAVSANGNVVTGNRDTNIAFGQIPKAWVLNVTKREVEIPATPNKPNGGSTGLHQIQLSWKIDKATYNSLTLKGYNVYCDGKKVAILKELQDEMTFALKDVYAGYRKFAIEAIYTDKQGKEMLSPRSNPEVIAVPDDYSFPLFEDFEKGSLNTNYWTKSKDYGDDADTEWLVAAQVGHDASMGLSTGACTFKPYSSSVISRPLDATKINKVKCSFLILCNQESAQGGGEVDLTKDTLSVEYTVDGGKSWSVAKEWTVKELPNLEGILTVDLTKHVAGKVFQVRFRKHGKGAVSYYFYLDNIMIGSGDNVDAPKGFTGKVMNNELFLMWKNSRNGYSLNYLSDPESPGYTLGNEGKELIGANKFMQGELAPYHGKYLTSVTSYINYYDDASGDKGIHAAVVVFEDGKLICEQEIENIKYNENTTQKLNQPIKIDSGKELIVGIKIHDYDAEQIPLTYESSKSSVTGKSDLYSEDNGKTWKTVRDFYENDPQMGSCCWRITGNITDQPNDAVAEEDNTLIGYNVFRNGVQLNNVCIPFEVTRYIDKQPIDKAEYTVVAYYNDGRESFASTPYILDLTNGIAPLVNKSVLSVDKSAIRLNAEGTLRLYSVDGHFVAKSAKGIIPLGNISSGIYIVLVEYNNQRFTQKILINN
>NZ_AP014598.1|WP_096408003.1|156622_157423_+|KilA-N-domain-containing-protein
MVKINVQNTAVNIVRHNDEDYISLTDMARSQMQEHIIFRWLSLKGTIEYLGEWEMLYNPDFNCTEFGTIRDAAGSNNFVLSVKTWIEHTHAIGIYSKAGRYGGTYAHRDIAYHFGMWLSPKFQLLLVKEYQRLKEEEQKMLGWSAKRELSKINYRIHTDAIKRNIIPEEVTPQQANAIYANEADVLNVAMFGMTAKQWREENAGKKGNIRDYATINELICLSNMENLNAVFIEQGIPQSERLLKLNKIAIQQMVVLENENHRNLLK
>NZ_AP014598.1|WP_096408007.1|157583_159101_-|DUF4301-family-protein
MLTKQDELLLNSKGITLSDFEKQLADFRNGFPFLKIESAATVGNGVVRLKENEVKEFTTAWDSYKAEKHKVVKFVPASGAASRMFKDLFAFLEAAYEVPTTDFEKFFFDNLEHFAFYNELNEKCRATHGKDIAQLVEAGNHKAIVATLLHTDGLNYGQLPKGLLLFHKYAEGERTAMEEHLVEAAQYASCGAEAHVHFTVSHEHLELFKAKAAQKQPMYEENHRTHFSITFSEQKPSTDTVAANPDNTPFRNDDGSLLFRPGGHGALIQNLNDIDADVVFIKNIDNVTPDRLKPETVTWKKVIAGVLVTLQEKTFEYVRKLKAADYTPADLQCMKNFLENNLHCRRKDIDQLNNDELAAYLLEKFNRPMRVCGMVRNSGEPGGGPFYAYNADNTVSLHILESSQIDSNDAESVRMFKEGTHFNPVDLVCATKDYAGKPFDLPQFVDPATGFISSKSKNGKELKALELPGLWNGAMSNWNTVFVEVPAITFNPVKTVNDLLREQHQ
>NZ_AP014598.1|WP_096408012.1|159253_161452_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MIFTDDELKSFHALTEELNEELANDVTEEDKEKLASYIKLMEEKGAMERNVFGLSELLCAMQTSLIAVRNIGLKRDSVLATVLYAGFENGALGIKQIETDFGKSVAQIIQGLARIQNLYKKNPIIESENFRNLLLSFAEDMRVILIMIADRVNLMRQIRDTDNKEAQRQVAEEANYLYAPLAHKLGLYQLKSELEDLSLKYLEHDAYYHIKEKLNETKKARDAYIKEFIDPVSKELQNAGLRFHIKGRTKSIHSIWQKMKKQKCAFEGIYDLFAIRIILDSPTQKEKMQCWQAYSIVTDMYQPNPKRLRDWISVPKSNGYECLHITVLGPNTKWVEVQIRTERMDEVAEHGLAAHWRYKGIQAEEGMDTWLASIRTALEAGDNLEVMTQFKRDLYDKEIYVFTPKGDLLKFPKGATLLDFAYHIHSKIGNQCVGGKINGKNASIRTELHSGDTVEVTTSATQKPKQEWLNIAKSARAKSKIRLALKETQVKEGVYAKEMLERRFKNKKIEIEEQTLFHLIKHLGFKEITEFYKQIADEKLDVNNVIETYQQLYNQTHNQNTQKETESAEKFELADETAELLKNNEDVLVIDQNLKGIDFSLSKCCNPIYGDPIFGFVTVNGGIKIHREDCPNAPELRKRFGYRVVKAKWSGKGGANYSITLRIIGHDDIGIVNNITNVLSKEEKVVMRSINIDSHDGLFSGNLVVLIEDTSKLNALIKKLKNIRGVKQITRL
>NZ_AP014598.1|WP_096408017.1|161574_162192_-|TetR/AcrR-family-transcriptional-regulator
MVIENDYKKEVKAKILQLATTMFFQYGIRKVKMDDIAARLKISKRTLYEIYQNKEDLLYEVVMLNDKRGLEKLEEFDKPGVNVINIIIHVFKLQTEEFSRINPVFLEDIGKYPKLMEYIQNKRKRKRKQVVAFIERGISEGCFLPDINIEIMNTLADASGHYIMSNNLYNKYNIKEIFRTVVLLYIRGICTEKGIKLLDEEMKGF
>NZ_AP014598.1|WP_096408021.1|162328_164617_+|NADP-dependent-malic-enzyme
MVKITKEAALEYHQNGRPGKIEVIPTKSYSTQTDLSLAYSPGVAYPCLEIQENPDNAYKYTDKGNLVAVITNGTAVLGLGNIGAMSGKPVMEGKGLLFKIYGGIDVFDIEIDETDPDKFCEAVEKIAPTFGGINLEDIKAPECFAIEERLKRTLDIPVMHDDQHGTAIISAAGLKNALEVAGKDIAKVQLVVNGAGAAAISCTKLYMALGLKKENILMLDSHGVITTDRPNLTEQKKLFATDRKDVHTLEEAMKGADVFVGLSKGNILSKEMIQSMNDNPIVFALANPVPEISYEDAMAARPDVLMATGRSDYPNQINNVIGFPYIFRGALDVHAKAINEEMKLAAVHAIAELAKQPVPDIVNEVYHVNDLTFGQKYFIPKPVDPRLITVVSAAVAKAAIDSGVARRQIEDFEAYKDKLMQLLGQETKFTRYLHATAAQHPQRVVFAEGVHQNMLKAAVQAKQEGICQPILLGHPDRIKRVANRLKLDLTGIELIDMRADKEQGRRATYAKHLAEKRAREGYTFDEAYDKMYERNYFGMSMVENGDADAMITGLYTKYSDTIKMAKDVIGIRPEYKHFGTMHILNTKRGIYYIADTLINRMPNTETLVDITRLAHHSVKFFNDNPVMAMVSFSNFGSDEGGSPQQVREALAMTQEAHPDWLIDGEMQINFALDKKLRDEKYPFTRLKGKDVNTLIFPNLASANSAYKLLQGFSPETEVIGPIQMGLNKPIHFTDFECSVRDIVNITAVAAIDAYIEKIKNNL
>NZ_AP014598.1|WP_148664619.1|165224_167258_-|hypothetical-protein
MMTNLLRNSYATFVALFIAMFALPTTTQAQIEYNLAVGGKVVTSDNCNDLSEIDGVSGTVNYEPKTKTLTLHDATIEGDIMYAISSDIYGLKIKVVGTNKITAQAYGIIFSRPTSIIGDGTLEIVGSDESGINTSGNTLTVEGCTLNVKGGKFGIRGYDGNHGEDITVKNAKITAEGTSEGSIGNIASLAMEGCAIIEPTGAAFDESLHGVALNGALVKDKVVISPASAPVTEYELIIAGTKVNDKNCGNLSEIEGVKGTVKYDPESKTLILEDATINIEKENAIYSVIDGLTLKVVGNNTLKGTNTAIGFQKPMTITGGGTLNVESTKETAIYAVGTSLVIEDCTINAKGLDCGISGNDGENGEQLTIKNAKVTAEGKEGGSVCDFVTLTMEGCVITEPVGAAFNESLHGVALNGALVKDKVVIGPAPAPITEYELVIAGTKVNEKNCGNLSEIEGVDGTVKYDDETKTLTLENATINVGEKNALFSVIDGLTIKVVGNNTLKGSEAAIVFSKPMAITGGGTLNVESTKQTAINAIGTALTIEDCTVNAKGLDCGFSGNSGKDEEKLTVKKATVSAEGTNVGSICNLAMLTMEGCAITEPVEAAFDESLKGVALNGALVKGKVVITNGATAIGSLTTDTATVKQGIYTLSGVRLSVELNKLPKGVYIVNGKKVVKQ
>NZ_AP014598.1|WP_096409404.1|168088_168598_-|hypothetical-protein
MKRILFTFLLLLIAILGKAQYGNYVQLTAVELLQYQLQKTRKQPTTPPFRRYGLRRIRASKYLDDSDPRHIWGWHLQPNEQYEASEPLYKLFQKGDLSSLGIIDTQGAGIEVVFWDKTYYRRFSQQLRNIGFTLSNSPAATNVLQFRKPDTTVQVDVTIWPDLYILKIE
>NZ_AP014598.1|WP_096408038.1|168691_170647_-|NAD(+)-synthase
MRYGFIKVATAIPEVRIADTKFNLEAIEKQIVMAEGQGVEIIVFPEFCITGYTCQDLFRQQLLLDDSEHAMMMLLDFTRQLDIIAIVGIPVCVGPLLLNCAAVVQHGKIIGIVPKTYLPNYAEFYEKRWFASARDLCPTQIHYAGQTVLVTPARQIFRTADGVKFGIEICEDIWAPIPPSNALTLAGVEIMFNLSASTEQIGKHRYLEALLAQQSARTISAYVYSSCGFGESSQDVVFGGNAFIYENGTQIAEAERFSLDPQLIIGEIDIEKLRSERRSNTTFVNAQKDMYVDPIGGVLPEKTYVNCLPKENTEREFTLTRKINPQPFIQSENMEAACEEVFNIQVTGLARRLLHTNCKTIVIGVSGGLDSTLALLVCVRAFDKLKFDRKGIIGVTMPGFGTSERTHRNAIALMEELGVEIKEISIQPSVVQHLKDIGHDIDVHDSTYENAQARERTQILMDLSNKYGGMVIGTGDLSELALGWCTYNGDHMSMYAVNGSVPKTLVRHLVTYVADLSDNAKVAEALHDIVATPISPELTPADEKGEIQQKTEDIVGPYELHDFFLYYFLRHGFHPSKIYYLAGKAFEGKYTGEEIKKWLYTFVSRFFKHQFKRSCLPDGPKVGTVSLSPRGDWRMPSDANSTNWLAEIEQL
>NZ_AP014598.1|WP_096408043.1|170662_171853_-|DUF2027-domain-containing-protein
MKIGDKVRFLSEVGGGTISGFQGNKIVLVEDEDGFEIPTPINDVVLVGNDDMSEAKIKSLEQTKVEQEESKSKSIKARLSDHADTAADEKWDEVEEPDYDPADNFVPQPREREGGNTLTAYLAFVPTKPRELNNTEFESYMVNDSNYYIHYIYMVGNGKEWRCKSVGEIEPNTKVFMEQFAYTDLNDLTETCVQLFAYKADKPFERKPALDTRIRIDATKFYKLNTFRENDFFDSSALLYAITEKAKVEETHIEPKLELPKKLQGSNTKNVAPQSQPARKSLERRYENNQSKAKHSKQILKNDKIVVDLHAEEVLETTAGMSAGDILEYQMGIFHATLEQYKNKNQQKIVFIHGKGEGVLRRAILRELNYRYKKYQFQDASFREYGYGATQVTIIT

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Crispr_ID: NZ_AP014598_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014598_2

218294-218421

Orphan

Consensus_repeat	Method
TAACTACCATGTAACTGGCATGTAACTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014598_2

>merge|NZ_AP014598|2|218294-218421|CRISPRCasFinder
CATAAGTCATGTAACTACCATGTAACTGGCATGTAACTGAAAGGCTCAGAAAAGCATCAAAGTTAGCTCCAACCCCTTTATAATGGGGCATAAAGCATATAACTACCATGTAATTGGCATGTAACTGA

>NZ_AP014598|2|1|218294-218421|CRISPRCasFinder
CATAAGTCATGTAACTACCATGTAACTGG	CATGTAACTGAAAGGCTCAGAAAAGCATCAAAGTTAGCTCCAACCCCTTTATAATGGGGCATAAAGCATA
TAACTACCATGTAATTGGCATGTAACTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014598.1\|WP_096408246.1\|225614_226046_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235871
NZ_AP014598.1\|WP_096408197.1\|213167_214724_+\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|211578
NZ_AP014598.1\|WP_096408170.1\|205804_206200_-\|TIR-domain-containing-protein	unknown	unknown	gnl\|CDD\|378100
NZ_AP014598.1\|WP_096409413.1\|212515_213163_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096408236.1\|223628_224852_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096408193.1\|209642_212504_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_AP014598.1\|WP_096408241.1\|224866_225238_-\|antitoxin-ParD	unknown	unknown	gnl\|CDD\|310261
NZ_AP014598.1\|WP_096408184.1\|208530_209163_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|365969
NZ_AP014598.1\|WP_172419476.1\|223044_223569_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273384
NZ_AP014598.1\|WP_096408221.1\|220765_221929_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341198
NZ_AP014598.1\|WP_096408166.1\|204801_205794_-\|caspase-family-protein	unknown	unknown	gnl\|CDD\|334197
NZ_AP014598.1\|WP_096408188.1\|209331_209604_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_AP014598.1\|WP_096409416.1\|220260_220773_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341155
NZ_AP014598.1\|WP_096408226.1\|222047_222974_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_AP014598.1\|WP_096408215.1\|219662_220262_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341144
NZ_AP014598.1\|WP_096408210.1\|218455_219670_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341164
NZ_AP014598.1\|WP_162630555.1\|206363_207695_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_AP014598.1\|WP_096408161.1\|202291_203626_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_148664621.1\|226242_226710_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096408202.1\|214742_216848_+\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008

Protein	Function_ID	Function_description	E-value
NZ_AP014598.1\|WP_096408246.1\|225614_226046_-\|hypothetical-protein	gnl\|CDD\|235871	PRK06835, PRK06835, DNA replication protein DnaC; Validated.	8.57376e-10
NZ_AP014598.1\|WP_096408197.1\|213167_214724_+\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|211578	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM). Function: methylation of specific adenine residues; required for both restriction and modification activities. The ECOR124/3 I enzyme recognizes 5'GAA(N7)RTCG. for E.coli see (J. Mol. Biol. 257: 960-969 (1996)). [DNA metabolism, Restriction/modification].	3.47121e-144
NZ_AP014598.1\|WP_096408226.1\|222047_222974_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.41517e-39
NZ_AP014598.1\|WP_096408193.1\|209642_212504_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	1.60502e-161
NZ_AP014598.1\|WP_096408241.1\|224866_225238_-\|antitoxin-ParD	gnl\|CDD\|310261	pfam05534, HicB, HicB family. This family consists of several bacterial HicB related proteins. The function of HicB is unknown although it is thought to be involved in pilus formation. It has been speculated that HicB performs a function antagonistic to that of pili and yet is necessary for invasion of certain niches.	0.00767069
NZ_AP014598.1\|WP_096408184.1\|208530_209163_+\|recombinase-family-protein	gnl\|CDD\|365969	pfam00239, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see pfam02796.	3.17007e-32
NZ_AP014598.1\|WP_096408221.1\|220765_221929_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341198	cd17517, RMtype1_S_EcoKI_StySPI-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR),similar to Escherichia coli str. K-12 substr. MG1655 S subunit (S.EcoKI) TRD2-CR2, Salmonella enterica subsp. enterica serovar Potsdam S subunit (S.StySPI) TRD2-CR2, and other TRD-CR's. Escherichia coli str. K-12 substr. MG1655 S subunit (S.EcoKI) recognizes 5'... AACNNNNNNGTGC ... 3' and Salmonella enterica subsp. enterica serovar Potsdam S subunit (S.StySPI) recognizes 5'... AACNNNNNNGTRC ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, S.EcoKI-TRD1 and S.StySPI-TRD1 both recognize AAC/GTT, S.EcoKI-TRD2 recognizes GCAC/GTGC and S.StySPI-TRD2 recognizes GYAC/GTRC. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2.It also includes TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases, such as Pseudomonas putida Jo 4-731 Type IIG restriction enzyme/N6-adenine DNA methyltransferase (RM.PpiI), and type I DNA methyltransferases such as Bacillus cereus BDRD-ST24 M subunit of Type I N6-adenine DNA methyltransferase (M.Bce24ORF51270P). RM.PpiI recognizes 5' ... GAACNNNNNCTC ... 3'.	1.27191e-21
NZ_AP014598.1\|WP_096408166.1\|204801_205794_-\|caspase-family-protein	gnl\|CDD\|334197	pfam00656, Peptidase_C14, Caspase domain.	2.59675e-17
NZ_AP014598.1\|WP_096408188.1\|209331_209604_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	5.79354e-12
NZ_AP014598.1\|WP_096409416.1\|220260_220773_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341155	cd17266, RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Staphylococcus aureus subsp. aureus MSHR1132 S subunit (S.Sau1132ORF3780P) TRD2-CR2. Staphylococcus aureus subsp. aureus MSHR1132 S subunit (S.Sau1132ORF3780P) recognizes 5'... CAAGNNNNNRTC ... 3'. The RM system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example S.Sau1132ORF3780P-TRD1 recognizes CAAG/CTTG and S.Sau1132ORF3780P-TRD2 recognizes GAY/RTC. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	6.45264e-35
NZ_AP014598.1\|WP_172419476.1\|223044_223569_-\|hypothetical-protein	gnl\|CDD\|273384	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein. Members of this paralogous family are found as six tandem homologous proteins in the same orientation per cassette, in four separate cassettes in Mycobacterium tuberculosis. The six members of each cassette represent six subfamilies. One subfamily includes the protein mce (mycobacterial cell entry), a virulence protein required for invasion of non-phagocytic cells. [Cellular processes, Pathogenesis].	0.00206211
NZ_AP014598.1\|WP_096408215.1\|219662_220262_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341144	cd17255, RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Flavobacterium columnare S subunit (S.Fco49512ORF2615P) TRD2-CR2. The recognition sequence of Flavobacterium columnare S subunit (S.Fco49512ORF2615P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.52394e-70
NZ_AP014598.1\|WP_096408210.1\|218455_219670_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341164	cd17275, RMtype1_S_MjaORF132P-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to MjaXIP/S.MjaORF132P TRD1-CR1. The recognition sequence of Methanococcus jannaschii S subunit (MjaXIP/S.MjaORF132P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	4.98667e-57
NZ_AP014598.1\|WP_162630555.1\|206363_207695_-\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.99612e-11
NZ_AP014598.1\|WP_096408170.1\|205804_206200_-\|TIR-domain-containing-protein	gnl\|CDD\|378100	pfam08937, DUF1863, MTH538 TIR-like domain (DUF1863). This domain adopts the flavodoxin fold, that is, five parallel beta-strands and four helical segments. The structure is a three-layer sandwich with alpha-1 and alpha-4 on one side of the beta-sheet, and alpha-2 and alpha-3 on the other side. Probable role in signal transduction as a phosphorylation-independent conformational switch protein. This domain is similar to the TIR domain.	1.79387e-17
NZ_AP014598.1\|WP_096408202.1\|214742_216848_+\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	5.22754e-28

>NZ_AP014598.1|WP_096408202.1|214742_216848_+|DUF262-domain-containing-protein
MKGYAKPLHEFIEGHKIQFVIPVYQRNYDWLIDNCDQLFSDLVKLSRSNRCSHFFGSIVTSSADSSYNRLVIDGQQRLTTISLLLLAGIKAVKDGALEISEESKIDEAYEVFLKAKFCNSERKIKLVPIENDRIAYDKIFNEEDSFDEDSKVTRNYRHFYDLLTRKPQALSFDQLLDAIERLQIISIELDSDDDAQLIFESLNSTGLALTEADKIRNYLLMSLTPEEQHMCFKNYWQKIEQATENQPTKFLRDYLTIQQQLQRPVRQSNIYYEWKKYMDGHERKEELVKMLDYAHYYQQVTEAKLSTAKLSEKMRHICNIETDVTNVFFIQFLKYASANNLSENEIFKVIDLVENYLARRIVCNMPGNALTQVFCALHKDVLKSIEEYSSANVELGNSYSDILTYHIMRRDGNYQLPRDMQFVESIKTRDAYHMLKPFQIFLFERLENSVHGEYNDVATDMKKKDATIEHIMPQTLNGDWKAILGDNFEEIQDKYLHTFANLTLTGINSELSNKPFEIKRDGKKIGNEIYPGYKNSKYRLTKNVTLCDKWTEIELQNRCNEIVATFLRLYPLPQTTFKPLPKPVDEASLDEETFSPTNRNLKGFRLFGNEYNETTWKGMLLQVVKLVMERYTDIVDTLYDAEGFFWSAKQADTRYCTMIAPQKYLWTSMDNRSKLRCLRFLFEKCDIAESELVLLLEPVKE
>NZ_AP014598.1|WP_096408197.1|213167_214724_+|type-I-restriction-modification-system-subunit-M
MSEELQQKLRDQLWEVANKLRGNMSASDFMYFTLGFIFYKYLSEKIEKHANDALLDDEVTFKELWAMEKDEDVEELQEGVKTECLENIGYFIEPNFLFSSVIESIKKKENILPMLERSLKRIEDSTLGQDSEEDFGGLFSDIDLASPKLGKTADDKNTLVSNVLLALDDIDFGVEASQEIDILGDAYEYMISQFAAGAGKKAGEFYTPQEVSRILAEIVTIGHARLRNVYDPTCGSGSLLLRAASIGHANEIFGQEKNPTTYNLARMNMLLHGIKFSNFRIENGDTLEADAFGDTQFDAVVANPPFSAEWSAADKFNNDDRFSKTGRLAPRKTADYAFILHMIYHLNEGGTMACVAPHGVLFRGNAEGVIRRFLIEKKNYVDAIIGLPANIFYGTSIPTCILVFKKCRKEDDNILFIDASKEFEKVKTQNKLRPQHIKKIVDTYRERKEIEKYSHLATLQEVAENDYNLNIPRYVDTFEEEEPIDIHAVMKEIKELEAKRADLDKEIEGYLKELGLVE
>NZ_AP014598.1|WP_096409413.1|212515_213163_+|hypothetical-protein
MIKIIEDIDITTLGVSVYNRRWQPIHLQQGEMDGACAVYSMMMNLLVLKVLTRSQVVNLNTTFKGNTAKGRLFKEFFVTEGLCRDGFYFSEIKEKLSHSFAKEVTASVQQYTASLSDQASFVKELKAAIDDNLPLVTAISFRSGAHAILAVGYEEQEGGVEKIFCLDPGYTINHTSFWNSVIMLNKGKGKYSHLYITDKDDDNVFISETLKIKRK
>NZ_AP014598.1|WP_096408193.1|209642_212504_+|type-I-restriction-endonuclease-subunit-R
MPVQSEAALENGLIDTLQKMNYEYVHIQEEKNLSTNFKKQLEKHNKKKLEELGRTEFTESEFEKILIYLEGSTRFEKAKKLRDLFPLELESGERLWVEFLNRTHWCQNEFQVSNQITVEGRKKCRYDVTILINGLPLVQIELKRRGVELKQAYNQIQRYHKTSFHGLFDYIQLFVISNGVNTRYFANNPNSGFKFTFNWTDAANVPFNDLEKFATVFFDKCTLGKIIGKYIVLHEGDKCLMVLRPYQFYAVEKILDRVENSNDNGYIWHTTGAGKTLTSFKAAQLVSELDDVDKVMFVVDRHDLDTQTQAEYEAFEPGAVDSTDNTDELVKRLHSNSKIIITTIQKLNAAVSKQWYSSRVEETRHSRIVMIFDECHRSHFGECHKNIVKFFDNTQIFGFTGTPIFVENAVDGHTTKEIFGNCLHKYLIKDAIADENVLGFLVEYYHGNEDVDNADQDRMTEITKFILNNFNKSTFDGEFDALFAVQSVPMLIRYYKIFKSLNPKIRIGAVFTYAANCSQDDEQTGMNTGGYVSESTGEADELQAIMDDYNNMYGTSFTTENFRAYYDDINLRMKKKKADMKPLDLCLVVGMFLTGFDSKKLNTLYVDKNMEYHGLLQAFSRTNRVLNEKKRFGKVVCFRDLKSKVDESIKLFSNSNNLEDIVRPPFDDVKKNYQELTKDFLEHYPEPHFVDYLQSENDKKQFILAFRDIIKKHAEIQVYDEFEEDAPDLGMTEQQFMDFRSKYLDIYDSFAVQNKEQPTTYQVPEDNPGMVGEPDPQQEAATGMGDIDFCLELLHSDIINVAYILELIADLNPYSEDYTEKRKHIIDTMIKDAELRSKAKLIDGFIQKNVDDDRDNFMARKQKADGTNDLEERLNNYIVTERNNAVNTLAKDEDLDASVLNHYLSEYDYLQKEQPEIIQEALKEKHLGLIKKHKALTRILDKLRSIIRTFSWE
>NZ_AP014598.1|WP_096408188.1|209331_209604_+|helix-turn-helix-transcriptional-regulator
MIKETISPVQNTGAQMSQEKKTWFYHSQMIANIMSARMKELGMTQKMLAEKMNCTQQYISKILKGRENLSLEAISKIENALDIHFLQMNE
>NZ_AP014598.1|WP_096408184.1|208530_209163_+|recombinase-family-protein
MTTGVIYARVSSIGDRQSTERQVKDLSEYAKYKGIEVCKVFEEHISGAKKNNERPVLCEAMEFCMEKRISILLVSELSRLGRNTFEVLASVKELIDYGINLYIQKEQLTLLDEEGHPSLFAPIMIATLSTCAQLERDNISFRLQSGRKRYIEKGGKLGRKVGSVKTAEQIRTEYREIISLLSKGYSIRDVAKLSGKGVSTVQRVKRFWEL
>NZ_AP014598.1|WP_162630555.1|206363_207695_-|AAA-family-ATPase
MVESFIVRNYMSYRDQVELSFLASKKEKASTLPPEWYQEIDGKRILRLLLCVGLNGTGKTKMIEALQYLRMLAIYKPQKPTDHPAYRPFLLDEKSKYEPSEFSLTYYINNICYYYYIKVSEKRIEEEILKQQSPNVLLYHRLYNAETDIVSIKFGPDCDISKSTQQALKLTVIQNSSVLSVFGSLNLESQSLKSNYDFFDKHISLIRKSANQKIADKLKTGNPERDLQVKRMLLQLLKDVGTNICDYEVDEITFNISDIENSVPELLLHQIQKEHPCGQISQKTLRLIHSTPLGNKSLDDSYESLGTMNIIKLLLVMYDVVIGRKCSCIDEIEYGIHTKALDFLLKMYLTIADNCQLVVATHDLSLLKSKNLRRDAVRMFEKDEYGVTQIKRKYVHNTMNFFNAYEKILDEQLGLMAESLDSLSKYRELIQTFYKEYEKDKRE
>NZ_AP014598.1|WP_096408170.1|205804_206200_-|TIR-domain-containing-protein
MYRIFISHSWKYSNQYDKIVEFLDDGGINYYNHSVPKDDPVHTNGTDKQLEDAIDAKIRGCNCVIILTGVYSSCSKWIKKEIAIAQKYGKPIIGVRPWGAERVSDAVTQAADVVVGWNAMSVANAVKNYSL
>NZ_AP014598.1|WP_096408166.1|204801_205794_-|caspase-family-protein
MRRALLIGINNYPDDLRLGGCIEDIHCLKSAIERHGNGEKNFGVKMLEDVQTSDEVLQNITELFHDDAEVALLYFSGHGYVNTTGAEIVTPYEVAHSGMYYKGVQMKDIMEVVHNSKVKNKIIILDCCHSGQIGKFNPTETGSVLDEGVSILTACREDESACEAGGHGLFTELLCSALQGGAADFNGNITMGSIYAYIDRSFGEWEQRPVFKTNVSAFVSLKKVEPKVPLSVFRELPNLFSTADEVHKLDSSYEFTNCPEEQHKLVEPYAKPENVKRFKLLQQLQSIGLVEPVDAQFMYFAAMDGKGCKLTALGKHYWRLVKNNNIWKYD
>NZ_AP014598.1|WP_096408161.1|202291_203626_-|hypothetical-protein
MINPNNINQLENTMSFDDGTQAPEMFKNITINVRKELFSQYNAQAFYKKFKGIGQSFTEGHEEYIAVSDNAVDMLSTKREDYTFVLPTSIKHGDKTYKVSLIGDYAFEGVSDKVQEVVVRKDVEYIGAKAFITSTDKTKLESTVKSVFFIESNPTKEMLSTTRFELDETGTNYSEFAPTTKVYVKQSALNNYKEKWTKKVYDKDTDTDKTSQFNFTSQIDYQIKDVKINHKYGTFAREFDVDLNIYSKEKNTARIGAFVAKLGEVKTGDGDYGHSTYHIRMSSVDVNGVGNGNFGYVPAYTGVLLKALDSETTPSDFYYAIGEDDDKDYKITNNIMHGVTVNPRNVGGLTIDEVIYVMQKGIFKKAMASAVSIPVHKAYAKIEGMPAGSKVEFSFSDDNTTNAIVTVDAEEKNADNAYYNLNGQRVTNPQRGVFIKGGRKVIIK
>NZ_AP014598.1|WP_096408210.1|218455_219670_+|restriction-endonuclease-subunit-S
MITTINNKHKKLNVPNLRFPEFQGEWEEERLADIADLYKGTGISKDQLSDDGEPCILYGELYTKYKSETIREVISKTNIDNTKLVRSKDNDVIIPCSGETAEDIATARCVLNGNILLGGDLNIIRLHGYDGTFMSYQLNGKRKYDIAKVAQGVSVVHLYGEHLKGVKTINPCLTEQKKIVSLLTLLDERIATQNKIIEDLKKLKSAIINYAINSLDTDFAKFSSLYEMAGEGGTPTTSNGSFYDNGKMPFIKIDDLKQKYLTENKDFITELGLQKSSAWLVPTSSILFSNGATIGEITITTYPVCTKQGILGIVPKQNIDVEYLYYFMSSSYFKKAVSRIVTEGTMKTAYLKDINNILCPIPTKEEQEEIVKIPSTLNSKIDTEKSILKLFITQKQHLLHQMFI
>NZ_AP014598.1|WP_096408215.1|219662_220262_-|restriction-endonuclease-subunit-S
MFCAIPLIKDFEVRRSAISKKLLCNDKWTTCIIQDIAEIGRGRVISSVEIDRQKHPLYPVYSSQTSNNGIMGYLDNYMFDGEYITWTTDGANAGTVFYRKGKFNCTNVCGILKILPKFDCYFVSLVLQQATQKYVSSNLANPKLMNNTMASIKIRMPNIETQKQLSKVFQTLDSCLLVHQRTCKMYLSEKQHLLCQMFI
>NZ_AP014598.1|WP_096409416.1|220260_220773_+|restriction-endonuclease-subunit-S
MVHSNKTNVRLSECVECSSSTLQESDVCEHGAYPVYGANGIVGYLDNYNTEGEAVYIIKDGSGVGTVSYVTGKCSATGTLNTLQAKEGYSLQYLYYLLKVFNFEPYKTGMAIPHIYFKDYGKAKFFCPSYIEQLQYAQSLSAIDSKLLVEKNILTSLSMQKKYLLRQMFI
>NZ_AP014598.1|WP_096408221.1|220765_221929_-|restriction-endonuclease-subunit-S
MDFYSTNSLSWDKLEYGTDAIQNLHYGLIHVGLPTMIDLSKDKLPNITNGNTPKNYELCQEGDIAFADASEDTNEVAKAVEFYKLKGKDVICGLHTIHGRDNQQKTVVGYKGYAFSSTAFHHQIRRIAQGTKIYSINSKNFFECYIGIPSKEEQKKIATLLRLIDERIVTQNKIIDKLQSLIRGLNDFLYTQYGGEVLTSFAELGTSYSGLSGKSAQDFGSGKPFITYLNVYSNNVIKENDFQYVAIKDDEKQNVVKYGDVLFTLSSETPEEVGIGSVYLGKEKVYLNSFCFGIHITNTEVAFPPYLSYYVSLTAFRKFIYPYAQGSTRFNLCKADFEKASIKLPTLENQKRIYSVLEHIDCKIETERQMLNLYNSQKQYLLRQMFI
>NZ_AP014598.1|WP_096408226.1|222047_222974_+|site-specific-integrase
MTTKTIREIALAWKIDKQRYVKQSTYAAYVLVLENHILPSFGDCEALSEKLVQEFVLQKLNGGLSIKTVKDILIVLKMVMKFGVKNEWINYCEWDIKYPTAEANKEIEVLTVTHHKKILDFIKQNFTFRNLGIYISLTTGLRIGEICGLKWSDINTDNGTITVNRTIERIYIVDDEHKHTELITNTPKTKNSCREIPMNKELLAMVKSLKKVVNADFYVLTNEEKSTEPRTYRNYYHRLMKRLDIPRLKYHGLRHSFATRCIESNCDYKTVSVLLGHANITTTLNLYVHPNMEQKKKCITKMFKSLGK
>NZ_AP014598.1|WP_172419476.1|223044_223569_-|hypothetical-protein
MDFCAFENTIDKNIETDKASDKFDQQLQAYKDAEATLNTAKSSLDTATASLTAAKDNLVKATDKADAVTKAIDSFIAKVRDIKFTTKVDDADIEKLTDDRKKYMSEESKLLEDHRKENKEILIRHFYDMSNMMSRNEGVWLSNGWVKTLLWIFLPCLLYTIFSIVYFVASYIDK
>NZ_AP014598.1|WP_096408236.1|223628_224852_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKAKVVSHGANAIRYSVDKDKAEIVKTNLLPDDISPTAMWARMLALQKKFEDKLNRYHPLKRNMIRIEVSPTSEETQGWTMENWQRLADDFIREFDAVDLSAKSKRKSAKAINLKDSQYVVALHCDSKSGIMHLHIDANRIDIRGNVNDAHYIYERAMAAATKVGQQRGWKDTQEVSRQNKEAITNDCLSVLAKMPYFDWELYTKCLTQMGYDVKQQSDSKGQVRGYAIKRGNSIYKSSELGKGRCLMPSKIEGTWAKLHHQELEKPVSIPTKNTQQSKIMTVPKPLPAADNTPKIRHFDFYTDEFHHYPVDIPQNCLDIIDKNIVLDADNVFAKIGDVQKTAILLFAEYIDAATTIAAQSGGGGGGATSGWGRDKDEDELSWAHRCAMMANRLCRPRKKQGYGR
>NZ_AP014598.1|WP_096408241.1|224866_225238_-|antitoxin-ParD
MNKKNIEKEAPKYTSRLIVRLTPQLHKEIAEYAALCGLTTSAYARKRLEGKYPKQRLTDKEMEALNSLSDARGDIQKLFGFLKGRSLTERENILRSEIFMKRWRTSAEVILNRMIEIERYLTQ
>NZ_AP014598.1|WP_096408246.1|225614_226046_-|hypothetical-protein
MLKALQNLIRHLQIRRPTADPGSSYGACYGLTIVDALHIAQLCKSNHTKYLELVQNEMLAIDDLGTEPVEVMDYGNIITPVIDLLTKRYEAQLFTIVTTNLDPKDIRKRYGDRIADRLNEMMAKIVYRNPTYRMDEIQTDGMS
>NZ_AP014598.1|WP_148664621.1|226242_226710_-|hypothetical-protein
MNQLWRSAMMSPMPASEIALFAYLVNESNKRYWKMPFVCSTTRICVDLRLSRQTVITARKHLAERKLISFIEGKSRHVPSKYTMLEWTDDLINNLTDGLTHDLTLIKDKGKELFIRKSSENFNSKKESKNGFSKQKENRRICPVSTEGADYDSTF

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Crispr_ID: NZ_AP014598_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014598_3

653617-653706

Orphan

Consensus_repeat	Method
TGTTTTGTTTTAGGAATGTGATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014598_3

>merge|NZ_AP014598|3|653617-653706|CRISPRCasFinder
TGTTTTGTTTTAGGAATGTGATGAATCGCGCCCTTACGTTTAATTGTTTGTTGTTGTTTTTGTGTATGCTTTGTTTTAGGAATGTGATGA

>NZ_AP014598|3|2|653617-653706|CRISPRCasFinder
TGTTTTGTTTTAGGAATGTGATGA	ATCGCGCCCTTACGTTTAATTGTTTGTTGTTGTTTTTGTGTA
TGCTTTGTTTTAGGAATGTGATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014598.1\|WP_044047448.1\|652587_652986_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375224
NZ_AP014598.1\|WP_096409121.1\|657482_659507_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_AP014598.1\|WP_096409109.1\|647270_647960_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_AP014598.1\|WP_096409115.1\|650511_652368_-\|type-IV-secretion-protein-Rhs	unknown	unknown	gnl\|CDD\|226032
NZ_AP014598.1\|WP_028906025.1\|654511_655951_-\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
NZ_AP014598.1\|WP_096409112.1\|647973_649662_-\|DUF4280-domain-containing-protein	unknown	unknown	gnl\|CDD\|238035
NZ_AP014598.1\|WP_172419477.1\|644113_644500_-\|sporulation-protein	unknown	unknown	gnl\|CDD\|372888
NZ_AP014598.1\|WP_096409103.1\|646249_646783_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379602
NZ_AP014598.1\|WP_096409094.1\|642607_643348_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238035
NZ_AP014598.1\|WP_061868610.1\|660951_662046_-\|NADH-quinone-oxidoreductase-subunit-NuoH	unknown	unknown	gnl\|CDD\|376297
NZ_AP014598.1\|WP_014708333.1\|663685_664558_-\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|173277
NZ_AP014598.1\|WP_148664635.1\|643535_644102_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096409127.1\|662092_663667_-\|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl\|CDD\|223722
NZ_AP014598.1\|WP_096409106.1\|646947_647274_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_045168229.1\|649651_650494_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_096409124.1\|659821_660361_-\|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl\|CDD\|376343
NZ_AP014598.1\|WP_028906024.1\|655966_657478_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_AP014598.1\|WP_096409118.1\|653741_654329_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014598.1\|WP_014708330.1\|660377_660911_-\|NADH-quinone-oxidoreductase-subunit-I	unknown	unknown	gnl\|CDD\|235637
NZ_AP014598.1\|WP_004361841.1\|659516_659825_-\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218

Protein	Function_ID	Function_description	E-value
NZ_AP014598.1\|WP_044047448.1\|652587_652986_-\|hypothetical-protein	gnl\|CDD\|375224	pfam17642, TssD, Hemolysin coregulated protein Hcp (TssD). T6SSs are toxin delivery systems. It is a multiprotein complex requiring numerous core proteins (Tss proteins) including cytoplasmic, transmembrane, and outer membrane components. The needle or tube apparatus is comprised of a phage-like complex, similar to the T4 contractile bacteriophage tail, which is thought to be anchored to the membrane by a trans-envelope complex. These tube and trans-envelope sub-assemblies are linked via TssK. This entry comprises family members such as the inner tube protein Hcp (TssD). Hcp proteins form hexamers that stack to form the inner tube/needle structure of the puncturing device. Other functions have also been described for Hcp proteins, for example, some Hcp proteins have been shown to have a chaperone function in that they bind to and stabilize effectors. In addition, there are evolved Hcp proteins that have the Hcp domain at the N-terminal half of the protein and a toxic effector function present in the C-terminal portion of the protein.	6.89943e-57
NZ_AP014598.1\|WP_014708333.1\|663685_664558_-\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|173277	PRK14816, PRK14816, NADH-quinone oxidoreductase subunit B.	6.06167e-120
NZ_AP014598.1\|WP_096409109.1\|647270_647960_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	1.22861e-11
NZ_AP014598.1\|WP_096409121.1\|657482_659507_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_AP014598.1\|WP_028906025.1\|654511_655951_-\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	1.01315e-103
NZ_AP014598.1\|WP_096409112.1\|647973_649662_-\|DUF4280-domain-containing-protein	gnl\|CDD\|238035	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, and the flanking polypeptide sequences - the exteins - are joined by a peptide bond. In addition to the autocatalytic splicing domain, many inteins contain an inserted endonuclease domain, which plays a role in spreading inteins. Hedgehog proteins are a major class of intercellular signaling molecules, which control inductive interactions during animal development. The mature signaling forms of hedgehog proteins are the N-terminal fragments, which are covalently linked to cholesterol at their C-termini. This modification is the result of an autoprocessing step catalyzed by the C-terminal fragments, which are aligned here.	4.66302e-20
NZ_AP014598.1\|WP_172419477.1\|644113_644500_-\|sporulation-protein	gnl\|CDD\|372888	pfam14040, DNase_NucA_NucB, Deoxyribonuclease NucA/NucB. Members of this family act as deoxyribonucleases.	1.58143e-16
NZ_AP014598.1\|WP_096409103.1\|646249_646783_-\|hypothetical-protein	gnl\|CDD\|379602	pfam14410, GH-E, HNH/ENDO VII superfamily nuclease with conserved GHE residues. A predicted nuclease of the HNH/EndoVII superfamily of the treble clef fold which is closely related to the NucA-like family. The name is derived from the conserved G, H and E residues. It is found in several bacterial polymorphic toxin systems. Some GH-E members preserve the conserved cysteines of the treble-clef suggesting that they might represent potential evolutionary intermediates from a classical HNH domain to the derived NucA-like form.	1.32247e-07
NZ_AP014598.1\|WP_096409094.1\|642607_643348_-\|hypothetical-protein	gnl\|CDD\|238035	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, and the flanking polypeptide sequences - the exteins - are joined by a peptide bond. In addition to the autocatalytic splicing domain, many inteins contain an inserted endonuclease domain, which plays a role in spreading inteins. Hedgehog proteins are a major class of intercellular signaling molecules, which control inductive interactions during animal development. The mature signaling forms of hedgehog proteins are the N-terminal fragments, which are covalently linked to cholesterol at their C-termini. This modification is the result of an autoprocessing step catalyzed by the C-terminal fragments, which are aligned here.	2.03513e-18
NZ_AP014598.1\|WP_096409124.1\|659821_660361_-\|NADH-quinone-oxidoreductase-subunit-J	gnl\|CDD\|376343	pfam00499, Oxidored_q3, NADH-ubiquinone/plastoquinone oxidoreductase chain 6.	6.49897e-24
NZ_AP014598.1\|WP_096409127.1\|662092_663667_-\|NADH-quinone-oxidoreductase-subunit-D	gnl\|CDD\|223722	COG0649, NuoD, NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion].	4.01837e-143
NZ_AP014598.1\|WP_096409115.1\|650511_652368_-\|type-IV-secretion-protein-Rhs	gnl\|CDD\|226032	COG3501, VgrG, Uncharacterized protein conserved in bacteria [Function unknown].	2.51932e-38
NZ_AP014598.1\|WP_028906024.1\|655966_657478_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	1.25438e-112
NZ_AP014598.1\|WP_061868610.1\|660951_662046_-\|NADH-quinone-oxidoreductase-subunit-NuoH	gnl\|CDD\|376297	pfam00146, NADHdh, NADH dehydrogenase.	9.81299e-125
NZ_AP014598.1\|WP_014708330.1\|660377_660911_-\|NADH-quinone-oxidoreductase-subunit-I	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	3.05434e-35
NZ_AP014598.1\|WP_004361841.1\|659516_659825_-\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	1.20182e-24

>NZ_AP014598.1|WP_044047448.1|652587_652986_-|hypothetical-protein
MGSFRATLELGGKEYDVLYSNYEFSRSTDSKGKPSSSISGGRVSVTVESTDDTTAIEAMLNSQFKAVEGKIVYKKTEEDAKMKEIAFKNAYIVHYKETLDVNNETPMTIAMTFSAENITVGNAELDNRWPRM
>NZ_AP014598.1|WP_096409115.1|650511_652368_-|type-IV-secretion-protein-Rhs
MSIPQTSITVSIGDTRLPSLKSLRLEQGIGCHHRFDLCIDLEAGGNRYVHNIGSSSEWLGQPITVHSSDQPIFLGVVTNVRLHREGSDFGFILVSGYSVTYRMETAPGCFSWLEQPIGEVVRSLCGQANVQLRLNPAYGKKLDYICQYDESDFDFVRRLALQYQEWMYYDGTSLVFGRPKDSSEPIELEYGTTLSSLEIGLQTLARPEQVFTYHSSSDREMDQPTPDLAYGHDQLSGKAFRASLGMYGRPARQHALPRIHTESELIKYMRRKQAADTAETHYVTAESHVPELRVGSVVRLYSSFLERVGQLTRESLGDFIITEIVHEVGEGSYYRNRFKAIPSTVEALPSPRVPMPVAETQMATVTSNADPNGNGRVQVRMNWQQGDMHTGWVRVMTPDAGKSGDVSSNRGFVFIPEVGDQVLLGFRHGDPARPYVMGSLFNGSTGGGGGQGNKCKSLTTRSGSSLKLDDSDGSVTLHDKGGVSMNFDGAGNATTNTQSSNFVNAGSNNVINVGDGSSVISSDSDGNIILKCNNAITLMVGENKIRICTEGIFINGKQQVAIGTDEMMTLKSKQDMTISSKTNMGISGTSTATLGSKKVSITGGSKVVVDGPDVNINS
>NZ_AP014598.1|WP_045168229.1|649651_650494_-|hypothetical-protein
MEINEEEYFRRYTEGESFVYGLTAEGHSKAMVIDSDFKMVSRHELTFLEVDTERQWWRFRLRELSNKLVKYDDSTVAQIIEATNEISAIYDELDFWVSDHGILRKINNRDQVYSKWEKVREYLTYKYPMSSYEMILAKEKELADETVFMNNIRYMHFMYVYFLQFGKYMREERFKHRDIDRFGSCVPIELECIYKTNRGVMFDGKTDRHFDGSMVYDGDAVSKIVKNTGAKGAELNYGMRADFHNDGEILNEANLSLTQTVGKDYSLYTHLHLKLDGYGE
>NZ_AP014598.1|WP_096409112.1|647973_649662_-|DUF4280-domain-containing-protein
MANEQYLTTAHYLTCSKGAKPVRVSVDSQKSVKFSGSLAATSKDLQTKSNFICAGSVAFAAGAIAGVATFAVGACMCVPGPGWVMAAIIAAVVVAALIFAGCKCASAAATRSWIPATTSQRSKLNGTPLLTLSSQMTCPAEGGIITAQETLWEAWGQQALTNLGHIANFAFGFLVGRGGASMVAEAGTAAAGASSAGQAATTFARTFGKSFLNTAKENLLQQFTGWNQGGMFCRFMKGFGLYGEAKAHYDIWTDDEKSIWEKIQASGMSLILDVFAAKGATTVCFPAGTKVHTQWGLADIEKLEIGVPVLTYNEETGRQEYKQVKKVMRRMTRRMCAMELSNGTTLEVTPEHRFFSNGEWVPIEELNVNDTLQLKDNSIVVIDNKIIFPTFVEVYNLEIEDNENYYVTIDGVLVHNGCNDAANKTEDPPGTFRDSNGKLRNSDGTFANDPSAVKKTKTGEEYQRNMSERQKALLRDADDPHADLSDEAREFIKENNGKKVPENYEVSHEEPLYTRSTHEGKAEIDVAENMKTQPKDVHRARHKICGDQYHQFGPANKPKIIK
>NZ_AP014598.1|WP_096409109.1|647270_647960_-|HEAT-repeat-domain-containing-protein
MNYKEISSDYEKASETDSFKVHNDFLNILLQDRSESGMELHYAYFNESDNSDLKRILGKGFLKRGKDGVSFLLGKLSNEPDNLIKSNIIHLIGLSHDKKYLSNIIPFLKDEDREVRYKAIIVCGWLGDTDTIDILKEHYPFEKVSLLRGFTISAIRQIFFRHKETKDKIVEFICTKLPEETDNEALAIMIVVLQDLTRIKYGLKEDPYSGEVSGDVTKAKCKILKHIGL
>NZ_AP014598.1|WP_096409106.1|646947_647274_-|hypothetical-protein
MIKMFWNDSELNIGIASSDAIEAPLNSVLDKFYDLSEAENSFLGLKKSDNDIIQFAYLREDTWLVDIPVMAERGSYMKECEYQDCVDIIRSYYTDSWRIPSQFTLRKW
>NZ_AP014598.1|WP_096409103.1|646249_646783_-|hypothetical-protein
MPIEELDVNDTLQLKDNSIVVIDNKIIFSTFIKVYNLEIEDNENYYVTEGGVLVHNGCREEYVGRTPGKNSRTGREVFDRMLKSDPPTARIKNEFGEAVKEFWDADNKVWRDISEADMGHIHDAVTYWNETGRYLGAKSKEVCKWMLSSDNYILEYYKTNRSKGAILGQTTTYLPPF
>NZ_AP014598.1|WP_172419477.1|644113_644500_-|sporulation-protein
MLVHNGYKKKASVKVVDEATHDVEVTISKSDYPETCAHIEDAINNGHDQLVTIDRKMAASNRAESLSGVPTKSGFDRDEWPMAMFSEGGKGADVRYINPSDNRGAGSAIGNALKEFPDSTIVKIIIID
>NZ_AP014598.1|WP_148664635.1|643535_644102_-|hypothetical-protein
MDLFNETSLDFLHRMPFRELFKKWDSAKIGTDEKLEMLMYAAYCSYFDKKDTIAKKFLTILTKEEFEGDYDKWTWIEGGILLQIHLENYSNHQLKDRLESTLDYAEDETVRKINRKAFQRRTKGFLLNKREFPFSTEDKTVDFLKVIPYFSELIFIRTFNESDITNEQLSLKMSLIEDKITQIISSYK
>NZ_AP014598.1|WP_096409094.1|642607_643348_-|hypothetical-protein
MVAEAGTAAAGASSAGQAATTFARTFGKSFVNTAKENFLQQFTGWNQGGMFCRFMKGFGLYGEVKAHYDIWTDDEKSTWEKIQASGMSLILDVFAAKGATTVCFPAGTKVHTQWGLADIEKLEIGVPVLTYNEETGRQEYKQVKKVMRRMTRRMCAMELSNGTTLEVTPEHRFFSNGEWVPIEELNVNDTLQLKDNSIVVIENKIIFPIFVEVYNLEIEDNENYYVTEEGVLVHNGCKPRKPSDSN
>NZ_AP014598.1|WP_096409118.1|653741_654329_-|hypothetical-protein
MKQLLLLSFLLFCTPALAQSPTTAERQHLTFSGISLNNTAAAFADSLVTKGFKPEAVPLRLPINKTNPIFRGRFENIPCIVEVGQNHTEKVDTLRIYLLNVNNPLRSYKILTNFYRSHYGAPIFENYYDTHLLPREAQQQLAADPFITTFSVDGGTVQFSLKYDAQLYNYIYSLLFIDTENALPILSNDDSVIEW
>NZ_AP014598.1|WP_028906025.1|654511_655951_-|NADH-quinone-oxidoreductase-subunit-N
MNYTDFFKMIPEASLVAVLIILFVADFISAKTEERKWFNPLACALLLANTIVCLLPMQPEEAFGGMYITSAAVNVMKAILAFGTFIVVLQSRVWAGKSGKEGEFYMLVVSTLLGMNTMMSAGNFLMFFLGLEMASVPMACVVAFDAYRNNSAEAAAKFILTATFSSGVMLYGISFIYAAYGTMYFNDIAANIQATPLTIMGLVFFFSGLGFKISLVPFHFWTADTYQGAPTTVTGYLSVISKGAAAFTLLSILFHVFGSMIAYWHVLMMIVIALSITIANLFAIRQGELKRFMAFSSISQAGYIMLAALGNNWDASIASLSYYVLIYVVANMAVFTIISVVEQNNGGKTDISDYNGFYKTNPRLSFLMTIAMFSLGGIPPFAGMFSKFFVFMSGVKGADITTTEGAWIYGILFIALINTVVSLYYYLKIVKAMYITRCDTPMPTFKSDTNTKFALAVCTTGIVLFGVFSCVYEWIAAAI
>NZ_AP014598.1|WP_028906024.1|655966_657478_-|NADH-quinone-oxidoreductase-subunit-M
MSWILTIFVIIPVLMLFGLWVAKNDNQVRGVMVAGASALLIGAIWLTVYFVQQRAAGNTDTMLLANSVMWFKPLNIAFAVGVDGISVVMILLSAIIVFTGTFASWQLEPMKKEYFLWFVLLSSGVFGFFISTDMFTMFMFYEVALIPMYLLIGVWGTGAKEYSAMKLTLMLMGGSGLLIFGFLGIYYFSGGSTMDVIELAKMHAMSKEVQNIFFPFVFIGFGILGALFPFHTWSPDGHASAPTAVSMLHAGVLMKLGGYGCLRIAMFIMPDALEMWAPVFLVLTTVSVVYGALSACVQTDLKYINAYSSVSHCGMVLFALVMTTQTAITGAILQMLSHGLMTALFFACIGMIYHRAGTRDVRYLGGLMKVIPFLAVSYVVAGLANLGLPGFSGFIAEMTIFVGSFENGGTFHRVCTLVACTSIVVTAVYILRVVGKILFQTIPNQKFNELHDATWDERFAVAGLIFCVAGLGLFPLFFEDMIIDAVGPIFDHIIAYVPNLGNL
>NZ_AP014598.1|WP_096409121.1|657482_659507_-|NADH-quinone-oxidoreductase-subunit-L
MFDYAFLILLLPFLSAIVLGLAGMKMPKPVAGIIGTCIVGALFALSLYTAYQYFFYTGEYTAMGETFNVVDGRLANGVYPTVTVFNFTWLRFSELLTFNIGFRLSPISVMMLIVITTVSFMVHIYSFGYMAERDKNYKFEEYEHGFQRFYAYLSLFTMSMLGLVVATNVFQMYLFWELVGVCSYLLIGFYYPKHTAVHASKKAFIVTRFADLFFLMGILFFSFYVKTFNFDLSVDANLVDQLQNVATDPSTAWVIPTALFLMFIGGAGKSAMFPLHIWLPDAMEGPTPVSALIHAATMVVAGVFQVASLFPIYIQFGAIEQLHWIAYIGAFTAFYAAAVACCQSDIKRGLAFSTISQIAYMLVALGVCYALDNEEGGLGYMASMFHLFTHAMFKALLFLCSGAIIVIIGSNFKEYMGGLHKYMPITNACFLIGCIAISGVWPLAGFFSKDEIVSACFQFSPALGWFMTLVSGMTAFYMFRLYYVIFWGKSYYEEDPENRRRPQEVPFVMWGPLVFLAIISIFAGWIPFGHFVSATGQSADIHLQHFHFSSVAWFSLLAAAIGISLATWMYMPKNNPVADKLAKRMPGLHKAALNRFYIDNAWQFFTHKIVFRCFSIPIAWFDRQVVDGTFNFLAWGTQEAGESIRPWQSGDVRHYAIWFITGTVALTLVILCLI
>NZ_AP014598.1|WP_004361841.1|659516_659825_-|NADH-quinone-oxidoreductase-subunit-NuoK
MIPVEYFFVLSGLLFFIGVFGFVTRRNLVAMLISIELVLNSVDLNFAAFNRLLYPDGYEGMFFTIFSIGVSAAESAVALAIIINVYRHLHSDQVNSIENMKL
>NZ_AP014598.1|WP_096409124.1|659821_660361_-|NADH-quinone-oxidoreductase-subunit-J
MAKLIVFAILAVAILGSAVFCVSTKRIMRAATALLFVLFGVAGLYFLLDYTFLGAAQISIYAGGITVMYVFAIQLVSKRTLQGLSERWLGKRTLLAAFIALVGVATVLGVFLKNKIFNELVSTNTSSTEVSMQVIGENLMSADKYGYVLPFEFISVFLLACIIGGLVILNKQKKEEVEE
>NZ_AP014598.1|WP_014708330.1|660377_660911_-|NADH-quinone-oxidoreductase-subunit-I
MEKKESYFGEIGSAFKTLATGLKTTMKEYFTPKSTEQYPENRKTTLHVAKRHRGRLVFKRDESENYKCVACLMCEKACPNGTIRIASEMREDPETGRKKRALLDYQYDLGDCMFCQLCVNACNFDAIEFTNDFENAVFDRSQLVLHLNEEVYKGGSLPNLIEGGADWEVGTFNTKTK
>NZ_AP014598.1|WP_061868610.1|660951_662046_-|NADH-quinone-oxidoreductase-subunit-NuoH
MFDFSIVTRWFDELLRHTLGLGDFGAILIECVVVGLAIIIGYAVLAIVLIFMERKVCAYFQCRIGPVRVGWWGTLQVLADVLKMLIKEIFTVDKADKLLYYLAPFLVIAASIGTFSFLPWNKGAEVLDFNVGIFLVTAISSIGVLGVFIAGWASNNKYSVLSAMRAGVQMISYELSLGICLISAVILTGTMQISGIVEAQTGPWQWLIFQGHIPAVLGFLVFCIAGNAEANRGPFDLAEAESELTAGYHTEYSGMGFGFYYLAEYLNLFVISGLAATIFLGGWAPINIGIEGFDALMNYIPGIVWFLGKTFVVVFLLMWIRWTFPRLRVDQILKLEWKYLMPLSLIILVLMTVCVAFGWTFTIA
>NZ_AP014598.1|WP_096409127.1|662092_663667_-|NADH-quinone-oxidoreductase-subunit-D
MKLENKEFGFERFADEMAKLKKEQHFDYLVTIVGEDFGAEEGLGCIYILENTQTHERCSVKQIAKQVEQDHVIPSVYNLWADADLLEREVYDFYGIKFLGHPDMRRLFLRNDFVGYPLRKDYDMDPAKNMYTTDDDIELDTTTEWNLNADGRLTATTHKLFTSDEFVVNIGPQHPSTHGVLRLQTVLDGENVKRIYPHLGYIHRGIEKMCESYTYPQTLALTDRMNYLSAMMHRHALVGVIEEAMGIELSERIQYIRTIMDELQRIDNHLLYTSCCAQDLGALTGMLYGMRDREHVLNVMEETTGGRLIQNYYRIGGLQDDIDPNFVENTKKLCKYLRPMIQEYLDVFGDNVITHQRFVGIGTMDEKDCISYGVTGPAGRASGWRNDVRKHHPYAVYDKVDFEEVVMTGGDSMDRYYCHIKEMYQSLDIIEQLIDNIPEGDFYIKQKPIIKVPEGQWYFSVEGASGEFGAYLDSRGDKSPYRLKFRPMGLTLVGAMDKMLKGQKIADLVTTGAALDFVIPDIDR
>NZ_AP014598.1|WP_014708333.1|663685_664558_-|NADH-quinone-oxidoreductase-subunit-B
MEIRKPKIKALPYEEWKDNDTLEKMANDLNDGGTNLVLGNLDQLINWGRSNSLWSLTFATSCCGIEFMAVGCARYDFSRFGFEVTRNSPRQADLIMCAGTITNKMAPALKRLYDQMAEPKYVIAVGGCAISGGPFKDSYHVMRGIDEIIPVDVYIPGCPPRPEAIIYGMMQLQRKVKVEKFFGGANHKQTAEESLLGKSNQALIFENKLGISAEEIKEKREAEWEAEHKPAPKPARPAAAKPAAAEPKKDTIVVDKPVTKEDVEKLGKELDKLNEAEAKQEPTDNNTAAN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP014598_1	1.3\|151724\|31\|NZ_AP014598\|PILER-CR	151724-151754	31	MH248138	Erwinia phage vB_EamM_Alexandra, complete genome	72918-72948	9	0.71

1. spacer 1.3|151724|31|NZ_AP014598|PILER-CR matches to MH248138 (Erwinia phage vB_EamM_Alexandra, complete genome) position: , mismatch: 9, identity: 0.71

tcaacacggcgcatcttgtagacgtttgaaa	CRISPR spacer
tcaacgcggcgcatctcgtagacagagacag	Protospacer
*****.**********.******.   . *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

228346 : 312595

unidentified_phage(42.86%)

protease,tRNA,integrase

attL 309020:309035|attR 325637:325652

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096408258.1\|228346_229468_-\|integrase	site-specific integrase	B8R670	Lactobacillus_phage	2.4e-08	29.2
WP_096408263.1\|229596_230547_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_096408267.1\|230896_232630_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_096408276.1\|233371_236470_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_096408280.1\|237277_238192_+	phosphate butyryltransferase	NA	NA	NA	NA
WP_096408285.1\|238198_239263_+	butyrate kinase	NA	NA	NA	NA
WP_096408294.1\|239657_240950_-	peptidase M64	NA	NA	NA	NA
WP_028905328.1\|241084_242068_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_096408299.1\|242072_243263_+	DUF4421 domain-containing protein	NA	NA	NA	NA
WP_096408304.1\|243259_244207_+	DUF1460 domain-containing protein	NA	NA	NA	NA
WP_014708379.1\|244359_244677_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_014708378.1\|244694_244985_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_096408318.1\|245471_245864_-	SRPBCC family protein	NA	NA	NA	NA
WP_096408323.1\|245882_246500_-	DNA alkylation repair protein	NA	NA	NA	NA
WP_096408327.1\|246673_247018_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_096408332.1\|247023_247875_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_096408337.1\|248042_248855_+	glycogen/starch synthase	NA	NA	NA	NA
WP_096408341.1\|248851_250309_+	DUF4270 domain-containing protein	NA	NA	NA	NA
WP_025000786.1\|250298_250430_+	hypothetical protein	NA	NA	NA	NA
WP_096408347.1\|250558_253084_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A0A8J958	Klebsiella_phage	6.1e-121	38.8
WP_096408352.1\|253903_256921_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_096408357.1\|257322_259428_+	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	2.3e-73	32.2
WP_096408362.1\|260378_263078_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.7e-12	20.6
WP_148664623.1\|264873_266445_-	hypothetical protein	NA	NA	NA	NA
WP_096408377.1\|266696_268316_-	hypothetical protein	NA	NA	NA	NA
WP_096408381.1\|268561_270187_-	hypothetical protein	NA	NA	NA	NA
WP_096408386.1\|270208_270409_-	hypothetical protein	NA	NA	NA	NA
WP_148664624.1\|270733_271015_-	hypothetical protein	NA	NA	NA	NA
WP_096409419.1\|271314_272478_+	hypothetical protein	NA	NA	NA	NA
WP_096408396.1\|273228_275295_+	hypothetical protein	NA	NA	NA	NA
WP_096408401.1\|275503_276802_+	TIGR00341 family protein	NA	NA	NA	NA
WP_172419458.1\|277361_277529_-	hypothetical protein	NA	NA	NA	NA
WP_096409422.1\|277584_282030_+	adhesin	NA	NA	NA	NA
WP_096408411.1\|282164_284705_+	C10 family peptidase	NA	NA	NA	NA
WP_096408416.1\|285069_286080_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_014708315.1\|286048_286669_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_096408421.1\|286928_290207_-	DUF2723 domain-containing protein	NA	NA	NA	NA
WP_096408431.1\|290846_292076_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.5e-27	36.0
WP_096408435.1\|292104_293382_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_009347062.1\|293844_294180_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_009347063.1\|294186_294561_+	hypothetical protein	NA	NA	NA	NA
WP_096408440.1\|294564_296625_+	AAA family ATPase	NA	NA	NA	NA
WP_009347065.1\|296612_296921_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009347066.1\|297017_297728_+	hypothetical protein	NA	NA	NA	NA
WP_096408445.1\|297724_298786_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_096405013.1\|301030_301690_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_036883557.1\|301954_304345_+	TonB-dependent receptor	NA	NA	NA	NA
WP_006948328.1\|306600_307080_+	hypothetical protein	NA	NA	NA	NA
WP_006948330.1\|307074_307518_-	hypothetical protein	NA	NA	NA	NA
WP_006948332.1\|307728_308355_-	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_006948333.1\|308357_308666_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_006948337.1\|308689_308956_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
309020:309035	attL	NA	NA	NA	NA
WP_006948338.1\|309273_309429_+	hypothetical protein	NA	NA	NA	NA
WP_006948339.1\|309512_309992_-	DUF1896 domain-containing protein	NA	NA	NA	NA
WP_024990780.1\|310045_311329_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-17	27.9
WP_006948341.1\|311341_312595_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.6e-29	29.2
325637:325652	attR	NA	NA	NA	NA

DBSCAN-SWA_2

572144 : 633894

unidentified_phage(50.0%)

protease,integrase

attL 575928:575947|attR 625916:625935

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006948341.1\|572144_573398_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.6e-29	29.2
WP_024990780.1\|573410_574694_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-17	27.9
WP_006948339.1\|574747_575227_+	DUF1896 domain-containing protein	NA	NA	NA	NA
WP_006948338.1\|575310_575466_-	hypothetical protein	NA	NA	NA	NA
WP_006948337.1\|575783_576050_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
575928:575947	attL	NA	NA	NA	NA
WP_006948333.1\|576073_576382_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_006948332.1\|576384_577011_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_006948330.1\|577221_577665_+	hypothetical protein	NA	NA	NA	NA
WP_006948328.1\|577659_578139_-	hypothetical protein	NA	NA	NA	NA
WP_036883557.1\|580394_582785_-	TonB-dependent receptor	NA	NA	NA	NA
WP_096405013.1\|583049_583709_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_096408445.1\|585953_587015_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_009347066.1\|587011_587722_-	hypothetical protein	NA	NA	NA	NA
WP_009347065.1\|587818_588127_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_096408440.1\|588114_590175_-	AAA family ATPase	NA	NA	NA	NA
WP_009347063.1\|590178_590553_-	hypothetical protein	NA	NA	NA	NA
WP_009347062.1\|590559_590895_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096409008.1\|591557_593264_-	hypothetical protein	NA	NA	NA	NA
WP_096409010.1\|595245_597231_-	hypothetical protein	NA	NA	NA	NA
WP_004352490.1\|597487_597691_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096409013.1\|598048_598357_+	DUF3853 family protein	NA	NA	NA	NA
WP_096409016.1\|598353_599406_+	AAA family ATPase	NA	NA	NA	NA
WP_096409018.1\|599588_600479_+	toprim domain-containing protein	NA	NA	NA	NA
WP_096409021.1\|600581_600929_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_096409024.1\|600925_601852_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_096409027.1\|601873_602533_+	hypothetical protein	NA	NA	NA	NA
WP_028896451.1\|602687_603971_-	DUF1016 family protein	Q9JMP5	Wolbachia_phage	7.3e-62	46.1
WP_096409476.1\|603983_605273_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_096409030.1\|605842_607075_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	6.2e-34	42.8
WP_096409033.1\|607100_607568_+	DUF1896 domain-containing protein	NA	NA	NA	NA
WP_096409036.1\|607706_608054_+	hypothetical protein	NA	NA	NA	NA
WP_096409039.1\|609136_609970_-	hypothetical protein	NA	NA	NA	NA
WP_096409042.1\|610503_611010_-	hypothetical protein	NA	NA	NA	NA
WP_096409047.1\|611477_611969_-	lysozyme	A0A2I7S753	Vibrio_phage	7.0e-05	33.3
WP_096409050.1\|611980_612439_-	DUF3872 domain-containing protein	NA	NA	NA	NA
WP_096409053.1\|612451_613042_-	conjugal transfer protein TraO	NA	NA	NA	NA
WP_096409056.1\|613788_615006_+	hypothetical protein	I3PUW5	Vibrio_phage	3.7e-31	30.0
WP_039422572.1\|623266_624502_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	4.6e-29	34.1
WP_096404883.1\|624516_624879_+	hypothetical protein	NA	NA	NA	NA
WP_096404884.1\|624928_625231_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_096404885.1\|625268_625547_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004362427.1\|625768_626122_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
625916:625935	attR	NA	NA	NA	NA
WP_004332869.1\|626105_626426_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_096409062.1\|628463_628943_+	hypothetical protein	NA	NA	NA	NA
WP_096409064.1\|629647_630106_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_096409067.1\|630112_630763_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_096409070.1\|630988_631348_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096409073.1\|631769_633422_-	S8 family peptidase	A0A217EQY2	Bacillus_phage	2.5e-46	41.1
WP_096409075.1\|633657_633894_-\|protease	protease inhibitor I9 family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_AP014598.1|WP_096408547.1|349248_349668_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_AP014598.1|WP_096408547.1|535071_535491_+|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_AP014598.1|WP_096408547.1|349248_349668_-|PcfK-like-family-protein

349248_349668_-

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

NZ_AP014598.1|WP_096408547.1|535071_535491_+|PcfK-like-family-protein

535071_535491_+

139 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

2. NZ_AP014597

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP014597_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014597_1

504041-504148

Orphan

Consensus_repeat	Method
CAAGACATAACGGATGTTAAATGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014597_1

>merge|NZ_AP014597|1|504041-504148|CRISPRCasFinder
CAAGACATAACGGATGTTAAATGCCGAGGTTCGGCAAACGCCAAGACATAACGGATGTTAAATACCGAGGTTCGGCAAACGCCAAGGCATAACGGATGTTAAATGCCG

>NZ_AP014597|1|1|504041-504148|CRISPRCasFinder
CAAGACATAACGGATGTTAAATGCCG	AGGTTCGGCAAACGCCAAGACATAACGGATGTTAAATACCGAGGTTCGGCAAACGC
CAAGGCATAACGGATGTTAAATGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014597.1\|WP_096405015.1\|491941_496441_-\|DUF2958-domain-containing-protein	unknown	unknown	gnl\|CDD\|226993
NZ_AP014597.1\|WP_096405021.1\|504272_505088_+\|hemagglutinin	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405020.1\|501807_503547_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_AP014597.1\|WP_096405024.1\|513076_513286_+\|toxin-PIN	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405018.1\|500229_501258_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_AP014597.1\|WP_006948341.1\|490430_491684_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_AP014597.1\|WP_096405017.1\|498640_500044_-\|DUF3945-domain-containing-protein	unknown	unknown	gnl\|CDD\|379136
NZ_AP014597.1\|WP_096405022.1\|505118_508772_+\|peptidase-M26	unknown	unknown	unknown
NZ_AP014597.1\|WP_172419422.1\|517121_517541_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405014.1\|489134_490418_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_AP014597.1\|WP_096405025.1\|513746_515750_-\|YWFCY-domain-containing-protein	unknown	unknown	gnl\|CDD\|379545
NZ_AP014597.1\|WP_096407205.1\|503674_503938_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405028.1\|519394_519871_+\|DUF3408-domain-containing-protein	unknown	unknown	gnl\|CDD\|378750
NZ_AP014597.1\|WP_006948339.1\|488601_489081_-\|DUF1896-domain-containing-protein	unknown	unknown	gnl\|CDD\|370228
NZ_AP014597.1\|WP_096405023.1\|509227_512938_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405027.1\|518914_519388_+\|DUF3408-domain-containing-protein	unknown	unknown	gnl\|CDD\|378750
NZ_AP014597.1\|WP_006948338.1\|488362_488518_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405026.1\|515844_517125_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_AP014597.1\|WP_096407213.1\|518124_518928_+\|conjugal-transfer-protein-TraA	unknown	unknown	gnl\|CDD\|366743
NZ_AP014597.1\|WP_096405016.1\|496534_498619_-\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236078

Protein	Function_ID	Function_description	E-value
NZ_AP014597.1\|WP_096405015.1\|491941_496441_-\|DUF2958-domain-containing-protein	gnl\|CDD\|226993	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair].	2.48791e-23
NZ_AP014597.1\|WP_096407213.1\|518124_518928_+\|conjugal-transfer-protein-TraA	gnl\|CDD\|366743	pfam01656, CbiA, CobQ/CobB/MinD/ParA nucleotide binding domain. This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyze amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.	1.99654e-06
NZ_AP014597.1\|WP_096405020.1\|501807_503547_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	5.88638e-16
NZ_AP014597.1\|WP_096405018.1\|500229_501258_-\|transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.15827e-05
NZ_AP014597.1\|WP_096405014.1\|489134_490418_-\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.47718e-51
NZ_AP014597.1\|WP_096405017.1\|498640_500044_-\|DUF3945-domain-containing-protein	gnl\|CDD\|379136	pfam13351, DUF4099, Protein of unknown function (DUF4099). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. The C-terminal repeat region of this family is DUF4098, pfam13345.	4.89897e-28
NZ_AP014597.1\|WP_096405027.1\|518914_519388_+\|DUF3408-domain-containing-protein	gnl\|CDD\|378750	pfam11888, DUF3408, Protein of unknown function (DUF3408). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length.	1.11942e-16
NZ_AP014597.1\|WP_096405025.1\|513746_515750_-\|YWFCY-domain-containing-protein	gnl\|CDD\|379545	pfam14293, YWFCY, YWFCY protein. This family is found in bacteria, and is approximately 60 amino acids in length. There is a conserved YWFCY motif. It is often found in association with pfam02534.	9.92124e-31
NZ_AP014597.1\|WP_006948341.1\|490430_491684_-\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.77672e-53
NZ_AP014597.1\|WP_096405028.1\|519394_519871_+\|DUF3408-domain-containing-protein	gnl\|CDD\|378750	pfam11888, DUF3408, Protein of unknown function (DUF3408). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length.	2.33332e-12
NZ_AP014597.1\|WP_006948339.1\|488601_489081_-\|DUF1896-domain-containing-protein	gnl\|CDD\|370228	pfam08989, DUF1896, Domain of unknown function (DUF1896). This domain is found in a set of hypothetical bacterial proteins.	6.37546e-67
NZ_AP014597.1\|WP_096405026.1\|515844_517125_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	1.44045e-11
NZ_AP014597.1\|WP_096405016.1\|496534_498619_-\|type-IA-DNA-topoisomerase	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0

>NZ_AP014597.1|WP_096407205.1|503674_503938_+|hypothetical-protein
MKKNCWVYILRNESGEITIGFSVDMDEKFTEISMRKEKLYYLRPFGNPFDGLAHKHLLDSLSKDTINHLVRRNREQTEIYKEVFRQA
>NZ_AP014597.1|WP_096405020.1|501807_503547_+|AraC-family-transcriptional-regulator
MKHFITLLFVITFSAGEMYAATPADSIRKEMKHLKGEKLLQAHKNLCRLAAAEDNMGYELRCIREYLAESLRQKDKEAEAQARITQLYCYYNYEMTDSISYYLPEVLSAMKKNGTWDYYYNAWNVLIESYLYEDKVQTALFEAQKMYADARKRKNNYGLGTSTYGMACIYQTMGRFREAEKTIEESIAALSKADEISQLLSAYNVLGETLDGLRKYEKLRVKCTEWKAVIDKYKNEALRKGYTPSLNGRYLYCTLATAVAELETGHYDRAKDLLQLADKYAEGRKAVARFKLLQVKARYYAATKQYDRAIACNNENMGIMTAAGDSVSLLTVQMQQADLYTQAGRYKEAAELYSLVIPHKDKLRNTELAKQLDELRTIFEVDKLTLRNEVITTRLYLSLIIVALLLATVVLYIIYTRRLRRKNRALYDSILLYRKAESDMETAARLVPEEELDREGKIYRRLCELMQQEKIYKDTELNRDLLSKRIGTNAVYITNAVRKYADGATVNEFINGYRLRHAASLLTNNPDLNINEVEYRSGFNSRATFNRCFRAFFGMSPSEYKAVSKEKKKTQKDLSDEGV
>NZ_AP014597.1|WP_096405018.1|500229_501258_-|transcriptional-regulator
MIIHFLTEKVSAFLRSRTTNTIERHRVIVYLLHSVLVVTVISLQFMGLGGSQEALPQTMSGIHLAMCLLSLSLYLTRRLTLSKAFSLVALVAQCTIAVRFFYFATVRPDHFLQLILINQITSLLAIFFLVLSFVRFTPFIVSAISVVSYGCVAAYLQEPSLWRLFGFFLFVQFFLCTLGELLRYNVMSVTKENTDLHHRETTLMRAVRLNKREIEAYLRMSSNDRPSPEDTDRLFSMLKPKSQRNLINAVRLHLKKHLMDDCDLAHHFPCLTKSETDVCRLILAGKKRSEIGLLLDKTENNVDVTRNHIRKKLNVPTNQDLQKFLINLLIEKEYPNTEEINK
>NZ_AP014597.1|WP_096405017.1|498640_500044_-|DUF3945-domain-containing-protein
MESNSNDNYVLVLEDRTEVKNEQEAGKLSVVSGIDDKGNLKTTEATAANQAAFLKFNNKDGLLKNFMTNFLKQFNNPTHFGLYKVVADNVEQGVDNLRTMLQSREKPESKQQLAEMGIPFGDYLPQQKNATTIDPEKVDWKMLGNLGLSRERLEQSGELEKMLNWQKSNLITIAVPIGDTTIYTEARLAFRTDDNGNIGLAIHPLRKEPQLDFPYMGYKFSPEEKEQLLTTGNLGKTIEVTPKNGKPFSAYVSIDPQTNEIIALRADRVNIPKEIKGVTLSDAQYKELVEGKAVKVEGMTAKSGKTFNATLQVNAERKGIEFIFDNNRRFKERQQQTQQQGAPHKLCGLELSEKQREALDSGRTLYLKNMVDKEGQSFNAYVRMDKEQNRPRFYKWNPDKKQETGKEKVVAVAEEHKTQVAVNNHGKTNEATKHVNEPLKTGQTQPTAAQKQKQDENKQKKSRGRKI
>NZ_AP014597.1|WP_096405016.1|496534_498619_-|type-IA-DNA-topoisomerase
MTTCIIAEKPSVARDIARIVGANSKQDGCLEGNGYLVTWAMGHLIALAMPEAYGFSAYKREDLPIRPNPFQLVVRQVRKDKEYHDDPVALKQLKVIRSCFDKADRIIVATDAGREGELIFRYIYQHLNCHKPFDRLWISSLTDKAIREGLSNLKPGNCYDNLYYSAKARSEADWLVGINASRALSIARKGGYSLGRVQTPTLAMVCRRYIENRDFSSVPYWKLSVEVEKEGMSLKAIGSKDYESEAAAQTALATLRSQSRLKVESVARKAGHTSPPLLYDLTALQKEANRRHGFSADKTLSIAQSLYEKKITTYPRTGSRYISEDVFEEVPVLLRKIDKALSNPLNRYSVDNAKVTDHHAIIPTGETPSGLSVDEATIYQMIVTRFLEAFSPDSEEERMQVKFTDGTNTFTWKACRQISLGWKDVQQGADTQNENGKENEEQTLSALPSLTEGEVLSLLNAEITEHKTKPKPLYTEATLLSAMENAGKDVEDAESKKAMAECGIGTPATRANIIETLILRDYIRRNKKAIIPTEKGLSVYEIVKDKKIANAEMTGSWELALAAIEARQMPAEKFAQGINSYVGTICEELLALAPQVQKSYPTYHCPKCGNESVGIYTKVAKCRHEGCDFHIFREICGTLLSEDNIRDLLTTGRTPILNGLTSKAGKKFTARLILNEDYTTSFEFESRKGKQRGR
>NZ_AP014597.1|WP_096405015.1|491941_496441_-|DUF2958-domain-containing-protein
MAYNKKAVLAANTEAIRVVLRLEKERREATEAEKGILRDYQGFGGLKCVLNRCDSPDDIRYWSKSEQHLFEPTQRLKQMIYRDAVDANTAKRYWESIKASVLTSFYTDTRIVAAIADTFSSVDVPIRRCLDPSAGMGAFTEIFATKAGTVDAMEKDLLTARISQAIHPYGQGNIIVRQAPFEAIGELEDKDKYDLITSNIPFGDFMVYDREYSKGKDILKRESTRAIHNYFFVKGLDCIKEGGLLAFITSQGVLDSPKNEAIRRYLMQNSQLISALRLPSGMFSDNAGTEVGSDLIVLQKQSGKTIGEGIEQQFVASVSVPIAEGSSVVFKHNSLFDGEWKDIAHRTIATERTMGRDPYGKPAWEYRFDGSIDDMAESIRTQLSLEFEQRFDRKLYETGIPMTEEERQKEVEKQLQKLGITVDLPNEEPKTDKEADNAYNLMPDSIRKQLPKLYSTEKELIGDKIAYARYFFPMGAYTAYLLEYDPKTRIGFGAVTMGYGWELGNMSLDEMEEVKIHGLGIERDLYFSPKKLHEIAELEEIVQGQYTKEPIIEEIKKKAEPTVLAQPMEEKLSTEEDKEEVQVEKAGEQVREKANRQIVQAIDHISYEPAPEGVPTLTLHRQYEQDVKEIRTDVESPREMNGQMVYFDDDHHPVMNGMDERQETEQPSLFAPEEYNLWTQEVTRVNSEIKEAPKSQVQTAQKQPENKAGKESEKQPTVTPGRKTRGKGNKKIISPSYREPSLFDFMNEAEERKPQPIAEVKKEFDSSPRPFLSSPDSHLRDGSIVVQKGQVGFLSDLKRHPTFNPMDLPYSQLSRLKAYIDIRDSYHRLYDYEANNQAEDKEEREKLNRLYDGYVLRWGYFNQKTNTDIIKIDATGMEILFLERSENGKYIKADIFDHPTAFATTELTVAADPMEALGASLNKYGSVELDYMSSLLPDMEESDIISALEGRIFYNPEEGGYEVADKFISGNVIEKAERIESWLLDHPDHEEAKLSLAALRAATPTSIPFAELDFNLGERWIPSKVYGRFASEFFGTEIGVSYHSNMDEYSISCDRKNANIWHKYAVQGEFRRYDGINLLKHALHNTIPDINKSKEVADKVTGEIKTIKVRDGHAIQMANAKIEEIRQGFVDWLGRTPDTFKQQLADRYNRLFNCFVRPNFDGAHQTFPDLDLKRLGIADLYKSQKDAVWMLKTNGGGICDHEVGAGKTLIMCTAAYEMKRLGLANKPMIIGLKANVFDIADTFRKAYPNARILYPGKNDFNKQNRQRIFNDIKNNDWDCIILTHEQFGMIPQALEIQEAILQKEMDSVEENLEVLRMQGAEISRGMLKGLEKRKQTLEAKLQNIQDSIAERKDDAVDFKMMGIDHLFVDESHQFKNLMFNTRHDRVSGLGNPDGSQRALNMLFAIRTIQERSGKDLGATFLSGTTISNSLTELYLLFKYLRPQALEKQGINSFDAWAAVFAKKSTDYEFSITNEIIQKERFRTFIKVPELAAFYAEVWE
>NZ_AP014597.1|WP_006948341.1|490430_491684_-|site-specific-integrase
MEKEKFKLLFYLKRGTQDKNGKSPIMGRISAGRSMVQFSCKCSCTPRLWDSRKNRLLGKSAEAVSVNKELDRLQVSIHKVYESLSGKSDAPITAERVRELVFGLNSESQGLLHHTDEYIDRFRERVGIDRSERRLKCLLLFRKHLANFVKYRYRVEDILIQKVDAVLVKDLEDYFAKEKGFKLNTSAGYLSILASLLKDLHKRRIIDTYPFINHSIRWEVGTPRYITREEVRRIAALGEDELQGYEKVSRDMFLFSCLTGLAYTDVYHLTEQHIFHEAGMTWIRKPRVKTGNVCHIPLLPEAAAIIERYRGIHTRAFRHEPPKGYLLPIPGCDTVNIHLKKIARLCGIQKTLTYHMARHTFASQMTLSEGVSIESVSKMLGHSQIKTTQVYAETSPERVFQDVEQILPQLAYYQLTN
>NZ_AP014597.1|WP_096405014.1|489134_490418_-|site-specific-integrase
MKSTFSILFYTDRSKTNEHGLCVIRCRITCNGTSSSFSTQLQTSPDEWLARKGRIKATADNSSGINLQLNSIEECLHSLYERTLREENYITAEYLKERYMQQSRPMPTLTELYQSVCEAKKELQGRTLSKATVKAFKDSHKSFVHFLQVRGRTDCMPTEVDKTLLEDYRLFMLRDLGNKESSVGNRLRHLHQVIRKALQERYVREDPFELIDIETPTYERNALTADDVQKLLAYRPHRSTENHCRLIFLLGCFTGLAFSDLKKLRMDDVYTLSDGRRYISLCRTKTQNRSIVPLLPIAEEILAIVSHGRREGLFFREFPCNSNFNKTIQEISIKAGLPPHTQATSHTARHTFATTICLENGLPIETVSKMLGHRFISTTEIYARVTKSKIAKEMQPLMGSERTRELRKALRLCPSRPPKKSSPLIGG
>NZ_AP014597.1|WP_006948339.1|488601_489081_-|DUF1896-domain-containing-protein
MTQKNKKELSYFRLKLENYMSEHHPERMSDTDFIKARTDMALTAYCDAVAQGFNHVEAESIASEVLFSGLHFSKYDTLVSVLENEFERELPAPLPEKLAPILLSNKAVQTTFDKFGLTDTFAENRQYDRLYTELTGTIVLLIESNRLPTVSQAEEASPK
>NZ_AP014597.1|WP_006948338.1|488362_488518_+|hypothetical-protein
MPYSCRAYLYTAVLPCKVGRDEYDRTDIEDDSTDLKKKNPTVEILLSIRRT
>NZ_AP014597.1|WP_096405021.1|504272_505088_+|hemagglutinin
MANESKVAQVGTIDLHSLTNDAHFIYMKDVENVIEEDEGAKTVARIQTAVKALKEAVKEEDERLILSKKSQYTEQIAAKDRERDSIFRGYRTAVKGMLRMPVAKMAEAAADLWQHLKDYNIDPDMQLERETSRMMNLVADLDYKLAPQVQLLGLKPYVDALRAANDTVEELLATRTDDRSQQIAGALRKARLASDEAYLDTVRLINAMAVVGTEKSLTPLINYLNANIKRYKEQVMTRGKKKDDDRPEKYGGDNTTTARTADTLTAADENS
>NZ_AP014597.1|WP_096405022.1|505118_508772_+|peptidase-M26
MKTKNLIERLSLFLLALVLTMPTWAQGNNGMEVVSIGSKEDWKAFCQRVNHNGEPFLNAKLTQDVDLGGEIVMLGSVSYPYSGTFDGNGHTLSFNWNAGEDNQIAPFKYVKDATIKNLRTQGKITSKGYGLSGMVYIALGTTTITGCISDVDITGGNGGWNDSHAAGMVQAVADGASVHITDCLVKGSITDNAAESERAMAGFVMSNSGTYTLTRCLYVGKNNAANDKYSKTFGETGGYGATFTDCYYLNTCGKVQGDKITEAQLKNGYVAYKLQKGRESQVWGQTLGTDNEPQLTADAKKRVYQVKFTYNGEVKAMRYANSGKTVALPTAEELLGAGYNPKMTYTLNFGNFTATTPVTEDKSVDVTVTGTFPIATAADWKEFCALVNGGQTTLNAKLTQDVDLGTDIAMVGTAKKPYAGTFDGQNHTLTVNWDAGSAKDVAPFGRVNGATIKNLRTEGSIRSDGYFLGGLIDEAYGGSNTVANCVSAVNITSSYTSNRCGAAGLVNYVFTYAHVTINDCLVKGSINATTEKGQKGMGGFVYVQNGACIMNNCLYAGTNNADNSNNNCYTFAPTNTSGATTTLNNCYYLNPCGEAQGTQVTAEQLKSGEVAHLLQGTRTENVWGQTLGTDLEPLPTTDATKRVYEVKFTYNGEVKATRYATNGQSIHGTLPTAEELLGAGYNPKLTYALNFGDFTANTPVTADKTVDVTVTGPFDIATAADWKSFCQRVKNGEYGLNAKLTADVDLGTDIVMLGYVFPYKGTFDGQGHTLTLNWDAGEKRDIAPFRSVDGATIRNLRVKGQITTQKLRLAGLVAEAFGTTTITGCATDVRLTGGYGSKGSDAAGLVQWVGHDGRVTITDCLVKGTFTDNSNEGDRSMAGFVCNNFGTSTLTNCLYLGTNNAENNGNSYTFADNGATFNNCYYLNACGRPQGMPVTAEQLKSGEVTKKLQGDRTDRCYWAQQLGKMPDFYNAADKSKANYVYYDAAKKGWACDDFRLTDEQPLPIGLDFTAATVTYERNFNGTQNATLCLPYDLSAQGFKAYTLSGGNKNEVHFKETKDKLTAYTPYYITADGTPLLGGTNIEVKAYTGANLTTSANGYSIKGTVVSMDNATAAAANAYILQDDGMFHKVTTDNPGATVPAYHAYIICPPQASGAKQLSVVLDGETTGIGDVTNEATDGKNGPVYDLQGRRVADRLDDARHRLPAGIYIVGGRKVVVK
>NZ_AP014597.1|WP_096405023.1|509227_512938_+|hypothetical-protein
MKHSITIQRLCLFLLVFLLAAPAWSKVYTTIARYRTKGEVEGTRTFDHGIVTVTWSDCKTGPALTAANRNWVMKKGSSVTISCKDGWRVRAFSIREQLENPTYINCVDDNRYKKKYYEFSDETHEKSLNISCWDAPSQDIRIEALKDVEFAVYEIDYVKAVSVGFKHSQYNVYSMSGWITPEIISNGHTGNVRYSLENNGTIAKVLDGGKLHIMRPGKGVFTVTYLANGTYAKSEGSTTINVMRDKVTFSKKNEVNLISCGDDYGIFELFNHNTSSHRDYNTNNGGISVTSSNPNVIKFDGRLRCGSKAGEVTITIKQAQNDYYEAASFSQTFYVIRRDRDGAMLIKDADEWKLFCKLVNEKGMTNLNARLDGDVNLGGDIVMVGTYANKYAGTFNGQEYALKINWNSGDQLRIAPFKSVNGATIKNLRTEGEINSNTHLLSGLICNVYGTTTISGCISAVNITSSYNEGGCDAAGMIECVWHNAKVTITDCVVKGKFHAATESGRRYMAGFVENQYGKCTLNNCLYIGENNATTGGHTFASNSSSGTTLNNCYYLNACGDAQGTPVTADQLRNGYVAYKLQAGRGEYTIWGQDLDSDAQPMPTNAPLKMVYEVKFSYKGQVRTTRYANRGKGIYGSLPTAKEILGSNFNPQDTYNFTFSGKFTTSTPITADRTVIVTILINNCYMIGSKEEWKEFCELVKDGQTNLDAKMTADINLGRDIAMVGNNEYSYAIVDFGRPYTGTFDGQGHTLNVSWYPKEGYKIAPFQSVNNATIKNLCVTGNINSEMDRGIFGGLISNADGNTTITNCITDMYLTVKDGNVGGMVSEILGGSLTMTKCVTNGVITLDNKGYGAGMICSGYNASITMTDCLVKVFFRPLSDWTRFTMSGFIYSLYYKNEPTTKPVTLNNCLYLGWGKVTQLHGPLRTFAPEEYTTLNNCYHLNKCGETPQGTQVTEKQLKSGEITKLLQNNRTDVCHWAQVLGEMPNLYHAPDKSRTNYVYYDEANSRWTCEDFRLTDGTPLPIGLDFLAVKATYERPFSSKNNATVCLPYELPRNGSFTAYNLSAGSNTSISFKETKDKLEAYHPYYITAGGTPQLDGYNLQVKAYNADGLKQPAGAFRFVGTVDGVDNATAAAANAYILQDDGKFHKVTTEYPEATVPAYRAYITCPKTLGAKQFSVILDGETTGIGDVTNEATDGKNGPVYDLQGRRVADRLDAARHQLPAGVYIVGGRKVIVK
>NZ_AP014597.1|WP_096405024.1|513076_513286_+|toxin-PIN
MKKYIKPEINVVPIVLENAILAGSTSVGIGEGPATGPALSKGNNFFGEEDDEEEYFGAPKRSSTSLWND
>NZ_AP014597.1|WP_096405025.1|513746_515750_-|YWFCY-domain-containing-protein
MAQEDDLRALGKIMDFMRGISVIFLLINCYWFCYEAFHEWNFTLGIINKILMNFQRTTGLFSSNLWTKLFCVVFLALSCLGTKGVKEEKITWPKIWAVLFAGFVFFFLNWWLLALPIGKIGAASLYIFTLSVGYICLLMGGVWMSRLLKNNLMDDVFNTENESFMQETRLMENEYSVNLPTRFYYKKRWNKGWINVVNPFRASMVLGTPGSGKSYAIVNNYIKQQIRKGFAMYIYDYKFPDLSEIAYNHLLHHLDAYKVKPQFYVINFDDPRKSHRCNPINPAFMTDISDAYESAYTIMLNLNRSWIQKQGDFFVESPIILLAAIIWFLKIYENGKYCTFPHAIEFLNRPYAQIFPILTSYDELANYLSPFMDAWEGGAQDQLQGQIASAKIPLSRMISPALYWVMTGDDFSLDINNPNEPKVLVVGNNPDRQNIYSAALGLYNSRIVKLINKKKQLKSSVIIDELPTIYFRGLDNLIATARSNKVAVCLGFQDFSQLTRDYGDKESKVIQNTVGNVFSGQVVGETAKTLSERFGKVLQQRQSMTINRNDKSTSISTQMDSLIPASKISNLTQGMFVGAVSDNFDERIEQKIFHAEIVVDSAKVSAEMKAYQPIPIIADFTNEDGSDNLKETIEANYKRVKQEILSLVELEKERIKADPALAHLNKE
>NZ_AP014597.1|WP_096405026.1|515844_517125_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKISSTENLGGALGYNFKKVEKGEASILLAAELYQDREGRYTMEDVLADMEALIPKKCRTKKTVFHCSLNPHPDEKLSDETLTQIAKEYMEALGYGNQPYIVFKHSDIAREHIHIVSLRVDSRGQKINDKFEKRRSKQITDALERKYNLIPSSKVTEKAVAETPKVDIGKGNIKEQVASVVRMVLKHYKFCSLGELNAILSKYNLAVEEVKTEFRGKKYDGLVYVPTDDKGGKISTPINASDIGRGVGYTAVQNRIQKSKLVVKPLVPAIRDKVLQTMRTSPRTEEELRQRLEEQGLRVVIRKNESERIYGITFIDDKEGIALNGSRLGKGYAANVFNTYFSNPTHNPFLDETLYGSPSVRLEQSAIVQPSQPNTEESDNFVDELIESMADVSFLSTGNDDWKEAAWQRKLRKQSKVNIRRRKH
>NZ_AP014597.1|WP_172419422.1|517121_517541_-|hypothetical-protein
MDMDKERERRSERKRAEKPRWDNWHVRLPNPKDQQRAIDLFHKSGAETKSDFVRGRILGESFKVITVDKSAVEYYRKLSELTAQIHKIGVLYNQTVRAINSYHSVKIAQIMLEKLENLSAQIIALQEQAINLTIDYRKK
>NZ_AP014597.1|WP_096407213.1|518124_518928_+|conjugal-transfer-protein-TraA
MEQTNTSPIFLGFSSQKGGVGKSTLAEIVSSILYYEKGIELFIVDCDLSQDSFYKLRQREKTFVEGDPLVSQQMNNYFSTLERVSYRVLKADPKSAIAKAEEHIRKNSKKRFELVVFDFPGHAGTSDLLELSLEMDYILSPIEADVQSMVSCLAYAKTMQDLGVSMTGARIKDVMLLWNKVDRRVKSTLIEKYSEYIRNEGYTLFDEHVYAAHRFCHELEQYGFRGAFRSTYLAPGKAQRAGTGLDEMIDSLLTHIRLKKEADNGTD
>NZ_AP014597.1|WP_096405027.1|518914_519388_+|DUF3408-domain-containing-protein
MARIDERRKILEAKLKEMSEDGMMKGKPKDTLAFDPPDEDEENEQQEAKEIMPVQGKTPLLQETNAERARKVPYETQVLSLDDYRTRYFHAVRIREKTAFTMDVETLQVLRNVLQDLGERISMAAYIDNILREHLREHKELLNNATARQRRKTTITI
>NZ_AP014597.1|WP_096405028.1|519394_519871_+|DUF3408-domain-containing-protein
MTTNDFLILFLVFSNILLIIYCCVIFFQVYIRDMNTKEDNTGNPTQVKKTASGTQHLMEDSKDFTDTDYLADFMLQSTEEQWEDYKAKFFIPRRSRNKSGFTINAETLSILRNVLRDTKAKATLTAYIENILTNHLKTHQELINEIADKQKLKNTLYL

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Crispr_ID: NZ_AP014597_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014597_2

1860929-1863584

Unclear

Consensus_repeat	Method
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	PILER-CR
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CRISPRCasFinder

34 spacers

cas2,cas1

The CRISPR arrays of NZ_AP014597_2

>merge|NZ_AP014597|2|1860929-1863584|PILER-CR,CRISPRCasFinder
GTTGGGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACACTATGCGTATCTGAGGAAAGCGGCGGTGGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAACTCACAGGTTAGTAGCACTTGCATTTATACCGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTATCATATAAAGATTGGCTGCTGTTGCAAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCAGATACAATAAAACAGTAATATGATAACGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACGTGTCGGTAGAATTCCGTGAAAGTTGATAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCATAATTAGGCAAGTTCCATATTCGCTAAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACAATAATTCACCATCATTCAAAGAGCCAATAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACACGTCTAAGTGTCTGAAATTGAACAAGGGAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCGGAAACGGAGTACAAGAGCGATAAGGACGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACAACGATAAGTGAGTACGTAGAAGCGAAATGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTCTACTACCTCGTAATGGACGTCCAAGCCTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACGTGGTATTTGTATTTATCGTCCAAAGGATGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTATTTCATAACTGGCGACAACGAGCTGGGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACAAGCAAGCCAACAAGGTGGTAAATATTATAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCGAGAGCGCAAAGACATATCACCGTTAAGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACAGATTTATCATTTATGCGAATATCAACGGCGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCGTCTAAGTGTCTGAAATTGAACCAATGAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCTTATGCTTGTACATCGAATAACGGGGTAAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACAGATTTATCATTTATGCGAATATCAATAGCGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCCAACAGCACCACTAACTAATAAGCTTAAAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTTGGAACAAGACCACATCCACGTAGAGTAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACGTTAGGATAAATAGCTGTAAAACCAACGAGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACACGAGAACGAAGCGACATATCTCCATTAAGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTGCAGTAAAGTTAAACGAATTGTTACCAGAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTTTAAAGTCGTTGTTGGCACACCGTCTTTAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTCGTAACTGTCATCGAACATATCAGACACAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTTGCAGTAAGTAACAAAACGGGCAAAGGGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCGAAGTAAATAAATAACAACAACGGAGGGGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACGAGCAAGGCAGCGAGAACGAAGAGGGAGGAGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACGCCGACAATGGCGTTGTTATAAACGACCCCGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCAAGTAACGTAACGTATGCTCAAAAAGAGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACTGTGTCCTAACAATGTAGCTCTGTTTACTGGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACAGCTATGGAAATAAGCGTTACAGAGGCTACGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAACCGAGCAGCTCGTCTTGAACAATTACGAGGTGTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC

>NZ_AP014597|2|1|1860929-1863584|PILER-CR
GTTGGGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTATGCGTATCTGAGGAAAGCGGCGGTGG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TCACAGGTTAGTAGCACTTGCATTTATACC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TATCATATAAAGATTGGCTGCTGTTGCAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CAGATACAATAAAACAGTAATATGATAAC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GTGTCGGTAGAATTCCGTGAAAGTTGATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CATAATTAGGCAAGTTCCATATTCGCTAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AATAATTCACCATCATTCAAAGAGCCAATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	ACGTCTAAGTGTCTGAAATTGAACAAGGGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGGAAACGGAGTACAAGAGCGATAAGGACG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AACGATAAGTGAGTACGTAGAAGCGAAAT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TCTACTACCTCGTAATGGACGTCCAAGCCT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GTGGTATTTGTATTTATCGTCCAAAGGAT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TATTTCATAACTGGCGACAACGAGCTGGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AAGCAAGCCAACAAGGTGGTAAATATTATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGAGAGCGCAAAGACATATCACCGTTAAG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AGATTTATCATTTATGCGAATATCAACGGC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGTCTAAGTGTCTGAAATTGAACCAATGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CTTATGCTTGTACATCGAATAACGGGGTAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AGATTTATCATTTATGCGAATATCAATAGC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CCAACAGCACCACTAACTAATAAGCTTAAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TTGGAACAAGACCACATCCACGTAGAGTA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GTTAGGATAAATAGCTGTAAAACCAACGAG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	ACGAGAACGAAGCGACATATCTCCATTAAG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TGCAGTAAAGTTAAACGAATTGTTACCAGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TTTAAAGTCGTTGTTGGCACACCGTCTTTA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TCGTAACTGTCATCGAACATATCAGACACA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TTGCAGTAAGTAACAAAACGGGCAAAGGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGAAGTAAATAAATAACAACAACGGAGGGG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GAGCAAGGCAGCGAGAACGAAGAGGGAGGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GCCGACAATGGCGTTGTTATAAACGACCCC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CAAGTAACGTAACGTATGCTCAAAAAGAGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TGTGTCCTAACAATGTAGCTCTGTTTACTG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AGCTATGGAAATAAGCGTTACAGAGGCTAC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGAGCAGCTCGTCTTGAACAATTACGAGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC

>NZ_AP014597|2|2|1860929-1863584|CRISPRCasFinder
GTTGGGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	ACTATGCGTATCTGAGGAAAGCGGCGGTGG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	TCACAGGTTAGTAGCACTTGCATTTATACC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TATCATATAAAGATTGGCTGCTGTTGCAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CAGATACAATAAAACAGTAATATGATAAC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GTGTCGGTAGAATTCCGTGAAAGTTGATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CATAATTAGGCAAGTTCCATATTCGCTAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AATAATTCACCATCATTCAAAGAGCCAATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	ACGTCTAAGTGTCTGAAATTGAACAAGGGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGGAAACGGAGTACAAGAGCGATAAGGACG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AACGATAAGTGAGTACGTAGAAGCGAAAT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TCTACTACCTCGTAATGGACGTCCAAGCCT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GTGGTATTTGTATTTATCGTCCAAAGGAT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TATTTCATAACTGGCGACAACGAGCTGGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AAGCAAGCCAACAAGGTGGTAAATATTATA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGAGAGCGCAAAGACATATCACCGTTAAG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AGATTTATCATTTATGCGAATATCAACGGC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGTCTAAGTGTCTGAAATTGAACCAATGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CTTATGCTTGTACATCGAATAACGGGGTAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AGATTTATCATTTATGCGAATATCAATAGC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CCAACAGCACCACTAACTAATAAGCTTAAA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TTGGAACAAGACCACATCCACGTAGAGTA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GTTAGGATAAATAGCTGTAAAACCAACGAG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	ACGAGAACGAAGCGACATATCTCCATTAAG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TGCAGTAAAGTTAAACGAATTGTTACCAGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TTTAAAGTCGTTGTTGGCACACCGTCTTTA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TCGTAACTGTCATCGAACATATCAGACACA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TTGCAGTAAGTAACAAAACGGGCAAAGGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGAAGTAAATAAATAACAACAACGGAGGGG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GAGCAAGGCAGCGAGAACGAAGAGGGAGGA
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	GCCGACAATGGCGTTGTTATAAACGACCCC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CAAGTAACGTAACGTATGCTCAAAAAGAGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	TGTGTCCTAACAATGTAGCTCTGTTTACTG
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	AGCTATGGAAATAAGCGTTACAGAGGCTAC
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC	CGAGCAGCTCGTCTTGAACAATTACGAGGT
GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTGGCAAATACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014597.1\|WP_096406129.1\|1854443_1855406_-\|HAD-IB-family-phosphatase	unknown	unknown	gnl\|CDD\|378932
NZ_AP014597.1\|WP_096406156.1\|1866852_1867092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096405418.1\|1872395_1873031_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223993
NZ_AP014597.1\|WP_096406117.1\|1849095_1850535_+\|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240532
NZ_AP014597.1\|WP_096406143.1\|1858480_1860328_-\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|293741
NZ_AP014597.1\|WP_096406164.1\|1868129_1868501_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096406134.1\|1855407_1856286_-\|decaprenyl-phosphate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|260126
NZ_AP014597.1\|WP_096406168.1\|1869113_1871135_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096407498.1\|1850602_1851562_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NZ_AP014597.1\|WP_096406172.1\|1871266_1872142_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NZ_AP014597.1\|WP_096406121.1\|1851575_1853012_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096406139.1\|1856290_1857313_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_AP014597.1\|WP_096407334.1\|1872147_1872396_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_172419432.1\|1873669_1873840_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_096406152.1\|1864052_1864985_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_AP014597.1\|WP_096406124.1\|1853008_1854358_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014597.1\|WP_004364539.1\|1863704_1864001_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_AP014597.1\|WP_096407502.1\|1857314_1858418_-\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_AP014597.1\|WP_096406112.1\|1848447_1849029_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_AP014597.1\|WP_088438693.1\|1873032_1873656_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP014597.1\|WP_096406129.1\|1854443_1855406_-\|HAD-IB-family-phosphatase	gnl\|CDD\|378932	pfam12710, HAD, haloacid dehalogenase-like hydrolase.	2.01511e-28
NZ_AP014597.1\|WP_096405418.1\|1872395_1873031_+\|AAA-family-ATPase	gnl\|CDD\|223993	COG1066, Sms, Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones].	1.73888e-05
NZ_AP014597.1\|WP_096406117.1\|1849095_1850535_+\|lipopolysaccharide-biosynthesis-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.63858e-109
NZ_AP014597.1\|WP_096406172.1\|1871266_1872142_+\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	9.05778e-10
NZ_AP014597.1\|WP_096406134.1\|1855407_1856286_-\|decaprenyl-phosphate-phosphoribosyltransferase	gnl\|CDD\|260126	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	4.82913e-110
NZ_AP014597.1\|WP_096407498.1\|1850602_1851562_-\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.55409e-49
NZ_AP014597.1\|WP_096406143.1\|1858480_1860328_-\|phosphoethanolamine-transferase	gnl\|CDD\|293741	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase. Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase catalyzes the modification of the lipid A headgroups by phosphoethanolamine (PEA) or 4-amino-arabinose residues. Lipopolysaccharides, also called endotoxins, protect bacterial pathogens from antimicrobial peptides and have roles in virulence. The PEA modified lipid A increases resistance to the cationic cyclic polypeptide antibiotic, polymyxin. Lipid A PEA transferases usually consist of a transmembrane domain anchoring the enzyme to the periplasmic face of the cytoplasmic membrane.	6.04824e-69
NZ_AP014597.1\|WP_096406139.1\|1856290_1857313_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	8.39655e-18
NZ_AP014597.1\|WP_096406152.1\|1864052_1864985_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	6.17818e-120
NZ_AP014597.1\|WP_004364539.1\|1863704_1864001_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.62918e-26
NZ_AP014597.1\|WP_096406112.1\|1848447_1849029_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	3.82259e-69
NZ_AP014597.1\|WP_096407502.1\|1857314_1858418_-\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	3.8743e-07

>NZ_AP014597.1|WP_096406143.1|1858480_1860328_-|phosphoethanolamine-transferase
MNVLSVVSKVLEKVSYPIRGNFCFFFFMYLVGIVVSYAELPANREDASVYGNLWLELFFDLYIVCILLSLIPKRVRRWVVGAFYIIAYATSIADLFCWVKFQSSLNPSMLLLAAETDKREASEFFSSYINSEVLASSVGLLLLIIVVHCLLAVWNIYRKHKGIKHPVQLNILKDKSAHFIGIITLFFFVVSAISSYHNKREMVQMFSLKTIGEVEHELTTPDCATFYTPVYRLVFSLYVNHLAAQQIDRLVEAKDRATVQSCTFDAKNIVLIIGESMGPHHSQQYGYFMNTTPRQVALEKSGLLVPFSDVVAPWNLTSFVFKNIFSMHVVGQKGEWCDYPLFPQLFRKAGYHVSFITNQFLPQAKEAVYDFSGGFFLNHKELSESMFDTRNTRLHTFDDGLLADYDNKLKAENKENNLIIFHLIGSHVSYNRRYPKSRKHFKAADYEQKRPELTKQRRYMLAHYDNAILYNDSIVDQIVKRFANEEAVVIYMPDHGEECFEGNRGIICRNHSAEIDYDLARYEFAVPFWIYCSPKYIEKHPKVFEQIKAVRHKRFMTDALPHLLLHLGGIKAKDYRSEYDILSPQYNEKRPRILKNQTNYDDLVAEHKRKAAMKP
>NZ_AP014597.1|WP_096407502.1|1857314_1858418_-|acyltransferase
MVDKMLNRTECNILRGVAIVGIVLHNYCHWLRPIVKENEYQFNQHNVDWFNNVMAHGFNERTFFHLLSFFGHYGVPIFLFLSAYGLVRKYEGVKTQSLPDSGSTNEPNALSFLRYHWLKLFRMMIVGFAAFVLVDAMTEGQHHYEVMDIVAQMGLFNNLLPNPDDIIWPGPYWFFGLMLQLYIVYRLFLYRKGWTWVVAFIAVCTIIELLCDPNGEPLNRWRYNFVGGMLPFGLGLLYAKYMRNVSLRIYGATFIVSLLLIRFGSNHFFTWLFVPMFVCSAGVSFVKLLSYWNTRYPKYTFGITKTFDWLGVISAALFISHPITRKIIIPISRGGDYWTGLLLYIIASVCAAWLFKEIMRRVPSPKL
>NZ_AP014597.1|WP_096406139.1|1856290_1857313_-|acyltransferase
MKRKEIELANISRFRGELMGLAILFVMLFHVGVPRTDMFFGLRRMGNIGVDMFFFLSGVGLWYSWTKNADAMQFLRKRLLRIYPAWLIVASLYYIPDFLSLAWVQHSGHSTNIIDLIGDIAINWDFWLHDELTFWYIPAAMMLYLVTPAYLSLIIKHPTYRWIPALMIAWCVVVQYVSPIHEAVGHIEIFWSRVPIYFIGLNFGAAVKEKKTLEGSSIWLILLTFAGMLAACIYLEQARHGRFPLFLERMLYIPLTITGILLLCIALDRWSGKRLHKALIFVGSISLEIYLLHNHFILIYIEQLGWHYWAKFLATLAIVLPFAWLLHKGVEKITMKIERS
>NZ_AP014597.1|WP_096406134.1|1855407_1856286_-|decaprenyl-phosphate-phosphoribosyltransferase
MKEIIRLIRPHQWIKNLVVLFPIFFGKALGNIESLYEGCITMIAFSFIASSIYCLNDIVDVADDRRHPKKCNRPLASGNISIAQGYAIMGIMVILSMVSLLFLPQQRIETGGVIGFYWALNVAYCLYLKQHAIIDVCIVAFGFVLRILAGGMATDIQLSKWIVLMTFLLMLFLSFAKRRDDVLRMNETGEAPRKNTIRYNLTFINQAITITASVTLVCYIMYTVSPETIANFHTENLYLTSVFVLLGLLRYIQIAVVDKKSGDPTKVILHDRFIQFIVLGFGLTFLVIIYFL
>NZ_AP014597.1|WP_096406129.1|1854443_1855406_-|HAD-IB-family-phosphatase
MKVYAFDFDGTLTKKDTFVEFIEFSKGFGKAFWGFFLFSPILILMKLRLYPNWKAKQRVFSWFFKGMEIDEFNRLCKDFATEKRGIMRQSGLETIRKALNEGDSVIIITASIENWVKPFFEEFGDKIRVEGTQIDVRLGTITGQFLTKNCYGKEKMKRLKSAFPYRKAYELIAFGDSKGDRYLLKEADKSYYKPFRGRKNENYGEIVRFGIVGVLATALQYGIYLLLIKWIEPRISNTVGYLLSFAFNYIASTKFTFKVKSTAKKGAGFTFAHIINYGLQTVFLTLFLWLGLPKNIAMIPVFGICVPINFILVRLFLKRK
>NZ_AP014597.1|WP_096406124.1|1853008_1854358_-|hypothetical-protein
MSVFGIFAVKKEERLLAFAMLFVFLAFNALLISSHFGVYTMGAHGGFWSLFTKNFRMSGYDNWSWITISCMRVHFETIRHPLFLTLLYPLYWLNHWLINTVGINFAVFFMAIIIVFSAFYSVIFTYRILREVLELQRKDATLLTLFLFSFGHILVPAMVPDHFIISLMLLTMTLYIAGIRQKQGKLINAWQSFLLIFFTAGMAASNAGKTILAGLFTNGRKFFSFKYLTIGIILPLALLFGIQQMQYYQVEVPQEEVTKKIVSNKKKKQPGKFEAHTKKRNAWLHAHTGQAASSEGIGKLMDISTSRTETLIENFFGEPIQLHQEYLLKDVSWDRPIFVKYSWIVNYVVEALIILLFLIGIVAGWRYKFMKMLLLWFACDFTLHTIMGFAINEVYIMTAGWAFIIPISIGYLLRILSCQSRFILRITLVLLTSWLWVYNGGQIIYYLIA
>NZ_AP014597.1|WP_096406121.1|1851575_1853012_-|hypothetical-protein
MNTIVGFLTIKREERLPVGLFFVWQLLLQTLAIAKYVPLFTKPSSNYYKLFVDNYHLSGFDPLTYLVVSDWSLAYDVNRHPLLAFFYYPFSLLNQLLIHATGINFSVYIVAVVLIFFSTYGFVLMLRIQRHIIGIASFDSAILAFILYSFSHILLSSIAPDHFVLSLFMLLLTLYIAGKQLQEQKEMSIWQTILLFLLTAGISLNNGLKVFLSNLFTRGKRFFTIKNIFLAIILPATAIFAIGEWQHEQFIADKVKASKVKKHNAIKAERKAMFAAFRDTTHIKDSSKQEQTFQKMWKAHRKEVLRAEAKQPQKAHSGKPVSNKRFLNWTDVSTSRTETIVENLFGESIQLHQKHTLEDVMKTRPVIVTYDWIANYVVEALIFLLFIVGIWCGRRVKFLWLWLSFAALDIVLHIGLGFGINEVYIMTAHWIYVIPLSIAFFVRNTCGRTRQTLRILLVLLALYLVVYNVSLLVQYLYF
>NZ_AP014597.1|WP_096407498.1|1850602_1851562_-|glycosyltransferase
MKASVSIVLCTYNGAKYIREQLDSILAQTYPLHEIIVQDDHSTDETTQILQEYACKHSLIKVFQNDSAQGVNGNFLSTMQRATGEYIAISDQDDIWETDKIENQINSIGENLLCSGLSRPFSTDGSFAYFDQRKRNIHAIRMCFLCLPGHTLLFRRELVCMLPPLTHSIYKYSMYDAVLSITASAHKSIVFIDKILVNFRRHTTATTYNDYSKSLPSWRNALHILRWGITHFSETRKQVHPLFAAKLSLLNYVNADNEEANAAKKILELELQNGILPFMKLQYHCIKNYKYLFHTEGKGFVRLVRAALYPIMQLYMYAK
>NZ_AP014597.1|WP_096406117.1|1849095_1850535_+|lipopolysaccharide-biosynthesis-protein
MAEQTLKEKTAKGLFWGALNNGTIQILNVLIGILLARLLSNSDYGLMGMLAVFTAVAGALQESGFTSAIANLENPTDNDYNSVFWFSTIVSWCSYIVLFFSAPLIADFFHHPELIDLSRFLFVSLLFSAIGTAPTAYLFKNIMVKETIILRVSSLVVSGIVGIVLALQGYGYWSLAWQQVLYITLTSLGRFFLIPWRPSLKIDFAPVRRMFSFSYKILVTTVVNVVSQNLLTFIFGRLYTANAVGNFSQAFKWDTMASTMVSGTTSQVAQPILVEVKAERERQVLVFRKMLRFTAFLAFPAMFGLGMVAYEFIIVSIADKWIDSVPLLRILCISGAFLPFYTLYQNLMISRGKSDVYLWVTTSLIAVQLLLVLLCHSKGMVFMVSAYTVATVLWLFVWQYFAHREISLRLWDVLLDIVPYMLVSAAVMAAVYMATGSINNLIVLLLVRIGLAVVAYFIVMKLLGSKMLDECIGYLRRKK
>NZ_AP014597.1|WP_096406112.1|1848447_1849029_+|nicotinate-nucleotide-adenylyltransferase
MKVGIYGGSFNPIHNGHIKLAEIFLQKACLDEVWFMVSPQNPFKINDKLLDDTLRLQLVRKALNGKKGMVACDYEFRLPKPSYTWDTLQRLSADFPTYEFVLLIGGDNWQAFDKWYHAEDILANYRIAVYPRKSDETVEKCNTLPSDNVTLLNIPLINISSTDIRLRIKNGHTIKGLVPECIEKDVEKYYNGK
>NZ_AP014597.1|WP_004364539.1|1863704_1864001_-|CRISPR-associated-endonuclease-Cas2
MVFFDLPTDTKKERKAASLFRQNLLKDGFTMFQFSIYIRHCGSKENMEVHIKRVSTFIPAYGKVGIMGITDKQFEEIKLFYGKKPQKPNAPGAQLELF
>NZ_AP014597.1|WP_096406152.1|1864052_1864985_-|type-II-CRISPR-associated-endonuclease-Cas1
MIKKTLCFSNPAYLSLHNAQLAIRLPEVEACNDLPDSFKKQTERTIPIEDIGVVLLDNKRITITSSALEALIENNCAVITCDSKNMPIGLLLPLCGNTTQSERFRSQIEASLPLKKQLWQQTIKQKISNQAKLLSIYTNTDVGCMYAWADKVRSGDPENLEARAAAYYWKNLFSDIPDFIRGREGEPPNNLLNYGYAILRAVVARSLVASGLLPTLGIHHHNRYNAYCLADDIMEPYRPYVDGLVLDVMAPTTDYSELTKEIKMKLLAIPVLDTTIGNKKSPLMIATQQTTSSLYKCFSGEQRRLVYPEL
>NZ_AP014597.1|WP_096406156.1|1866852_1867092_+|hypothetical-protein
MAKVIHVHLIHGIKGTKRKDWYFSSISAVYTVFTPEQVGATRNYLLHAGLSGNGTIITKRAVIKQSTLISGGSGATYKD
>NZ_AP014597.1|WP_096406164.1|1868129_1868501_+|hypothetical-protein
MARKIQTTMDVKRTLMKAFGVTERMVNRALSFDSDSELARKIRHTARMKGGWIEASVPEEEIFYDVTENGMRLMRQYFSNGAVLEANMTTGTGIILFKGSKRKDYSKVYLNEIPSMQEYAKAL
>NZ_AP014597.1|WP_096406168.1|1869113_1871135_+|hypothetical-protein
MEYYGNKLCISYHELVDSGIMTNSNYCYKAWKGQIDVVRRGGGANGCCALIAIDSLPTKYKEAVEEMYPGGDEVRIKAWVLSNYEMDQAAVAFFHDRSKTGIDLAEKKKREYIINASVLNCCIKLYERARDSQRLFGGKYNWDMMAKTIETLREELGHTLPASTLRFRKKVNDYKRNGYGCLISGKFGNQSARKVDYKTKQLVRGLAVLPNKPYNSNVHEMYISFVCGELDVYDPKTGELFNPDDFTDKNGEPKYLSESTINNILNEPATKMLIEKSLSSWSTFMHEQMPYMHRHSGHFSLSQITMDDVDLTRKLKDTKQRVHAYYAYDVVSQCVIGASYARKKDERLVVDCFRDMFRLIARNSWGIPAGIEVENHLMSQYKEGFLKAETVFQFVRFCAPLNSQEKYAEPLNGAKKRSVIHKNHEGIGRFYGKGKWRQEYRKISDETNELYEDKEYFTWEQLVADDRKDNEEWNNMLHPNQKMYPGMTRWQVLEANINPNLLPYDARTLAYHIGERVETSIRRNSTVRVAHEDWWLSCTNVLERLEPNNYKVTACYLPDDEGAPQEVFIYQNGKYIDTVEKVNTYSRVMAEQTEEDKAAFTAQQKKIVKFNKYVEDNAIDRLGVMKSLTHGPSRKERGAAEEDTEALELKPQKELERRALVPMDAASHAVADI
>NZ_AP014597.1|WP_096406172.1|1871266_1872142_+|AAA-family-ATPase
MITTGNKQRILEAIAANRKNYPSDAKHASALGISASVYTGLKKGQTEKVLSDANWVNIARRLDVNLRETIDWKGAQTETFRYISLQMEACQERSLSVILCDLPNIGKTYTARWYVHEHRNAVYVDCSQVKTKRALVKKIAQEFGVGISGKYQDTYEDLVYYLRSMERPLVVLDEAGDLQYEAFLELKALWNATEMCCGWYMMGADGLRAKINRMVEHQKVGYAEIFSRYGGKYSRVTPDQEDDRRQFLLEQACAVASVNAPKGTDIGQIVRKSGGGLRRVYTEIEKLKRGA
>NZ_AP014597.1|WP_096407334.1|1872147_1872396_+|hypothetical-protein
MTKIEMEAMEAVIGIRKELARQNEIDWEQRRYEIAKECLPTVYQTALEIAKKTGVIEEPKDIVAVAVDLADVLIENLKKDKE
>NZ_AP014597.1|WP_096405418.1|1872395_1873031_+|AAA-family-ATPase
MVKRAYSPKDIAAKKWVTLPWGEKWSEPFGFPAENASWFISGASAQGKSSFVMQLGKELCKYGPVLYMSYEEGVTQPFQRRMDYLNMNEVQGRFRVIDDESIEELETRLAKPKSAKFIIVDSFQVGCNNFGWSYSSAVTLMKRFSRKCFIFISQEYKSEPMGKPAVSLRYICDMKVRVMGYKAYCLGRSVGSAGTHYVVWKEGILKTSNNI
>NZ_AP014597.1|WP_088438693.1|1873032_1873656_+|hypothetical-protein
MKRTANDGSFKKGNVPYNKGTNISSRKHHTRKGVQGFLKRSVLMIAQDGSVAREFESVAECQKYLGLKDRHSISYAIKKQQLCAGHKLLYEDDWSPLGDYRWRPTIGRNIDGSLKKGHPWSSLYNSRMSEEMKEKRRKASSEQSKRMADDPNSKWGKGVQKPILCITTGIRYESIKQASSQLNIPANYISAAILRFGTTKGLKFRNI
>NZ_AP014597.1|WP_172419432.1|1873669_1873840_+|hypothetical-protein
MASKRDNLLYRLRKKGVRVITRERTIFFPYDGEPFKTMQVKRLCKEFHFYVQLEIQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP014597_1	1.1\|504067\|56\|NZ_AP014597\|CRISPRCasFinder	504067-504122	56	NZ_AP014597.1	504026-504081	2	0.964
NZ_AP014597_2	2.34\|1863508\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863508-1863537	30	NZ_AP014597.1	1109456-1109485	0	1.0
NZ_AP014597_2	2.34\|1863508\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863508-1863537	30	NZ_AP014597.1	1879069-1879098	0	1.0

1. spacer 1.1|504067|56|NZ_AP014597|CRISPRCasFinder matches to position: 504026-504081, mismatch: 2, identity: 0.964

aggttcggcaaacgccaagacataacggatgttaaataccgaggttcggcaaacgc	CRISPR spacer
aggttcggcaaacgtcaagacataacggatgttaaatgccgaggttcggcaaacgc	Protospacer
**************.**********************.******************

2. spacer 2.34|1863508|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to position: 1109456-1109485, mismatch: 0, identity: 1.0

cgagcagctcgtcttgaacaattacgaggt	CRISPR spacer
cgagcagctcgtcttgaacaattacgaggt	Protospacer
******************************

3. spacer 2.34|1863508|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to position: 1879069-1879098, mismatch: 0, identity: 1.0

cgagcagctcgtcttgaacaattacgaggt	CRISPR spacer
cgagcagctcgtcttgaacaattacgaggt	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP014597_2	2.7\|1861434\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861434-1861463	30	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	213382-213411	6	0.8
NZ_AP014597_2	2.7\|1861434\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861434-1861463	30	NC_021800	Cellulophaga phage phi46:1, complete genome	6181-6210	6	0.8
NZ_AP014597_2	2.13\|1861894\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861894-1861923	30	MN693897	Marine virus AFVG_250M931, complete genome	18026-18055	6	0.8
NZ_AP014597_2	2.3\|1861130\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861130-1861158	29	AP014205	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C77-MedDCM-OCT-S35-C75, * SEQUENCING IN PROGRESS *	32103-32131	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250021	Prevotella phage Lak-B2, complete genome	215470-215498	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250024	Prevotella phage Lak-B5, complete genome	209518-209546	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250028	Prevotella phage Lak-B9, complete genome	214401-214429	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250023	Prevotella phage Lak-B4, complete genome	215372-215400	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250025	Prevotella phage Lak-B6, complete genome	212711-212739	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250022	Prevotella phage Lak-B3, complete genome	212726-212754	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250027	Prevotella phage Lak-B8, complete genome	215616-215644	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250026	Prevotella phage Lak-B7, complete genome	214675-214703	7	0.759
NZ_AP014597_2	2.4\|1861206\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861206-1861234	29	MK250020	Prevotella phage Lak-B1, complete genome	214381-214409	7	0.759
NZ_AP014597_2	2.7\|1861434\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861434-1861463	30	MN694092	Marine virus AFVG_250M12, complete genome	44077-44106	7	0.767
NZ_AP014597_2	2.8\|1861511\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861511-1861540	30	KC699836	Bacillus phage SIOphi, partial genome	53715-53744	7	0.767
NZ_AP014597_2	2.16\|1862124\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862124-1862153	30	NC_017078	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence	144897-144926	7	0.767
NZ_AP014597_2	2.19\|1862354\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862354-1862383	30	NC_017078	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence	144897-144926	7	0.767
NZ_AP014597_2	2.20\|1862431\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862431-1862460	30	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	404746-404775	7	0.767
NZ_AP014597_2	2.26\|1862892\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862892-1862921	30	NZ_CP030090	Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence	30172-30201	7	0.767
NZ_AP014597_2	2.29\|1863123\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863123-1863152	30	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	522537-522566	7	0.767
NZ_AP014597_2	2.29\|1863123\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863123-1863152	30	NZ_CP044283	Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence	451447-451476	7	0.767
NZ_AP014597_2	2.29\|1863123\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863123-1863152	30	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	415531-415560	7	0.767
NZ_AP014597_2	2.29\|1863123\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863123-1863152	30	NZ_CP017304	Rhodococcus sp. YL-1 plasmid pYLL2 sequence	103132-103161	7	0.767
NZ_AP014597_2	2.3\|1861130\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861130-1861158	29	CP008937	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00001, complete sequence	56858-56886	8	0.724
NZ_AP014597_2	2.10\|1861665\|29\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861665-1861693	29	MT657334	Microbacterium phage Stormbreaker, complete genome	9181-9209	8	0.724
NZ_AP014597_2	2.11\|1861741\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861741-1861770	30	NC_026611	Edwardsiella phage GF-2 DNA, complete sequence	8386-8415	8	0.733
NZ_AP014597_2	2.11\|1861741\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861741-1861770	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	725584-725613	8	0.733
NZ_AP014597_2	2.22\|1862584\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862584-1862613	30	KC522412	Lactococcus phage CaseusJM1, complete genome	8061-8090	8	0.733
NZ_AP014597_2	2.28\|1863046\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863046-1863075	30	NZ_CP024789	Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence	69334-69363	8	0.733
NZ_AP014597_2	2.28\|1863046\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863046-1863075	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	668099-668128	8	0.733
NZ_AP014597_2	2.29\|1863123\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863123-1863152	30	CP054922	Streptomyces sp. NA03103 plasmid unnamed2, complete sequence	49266-49295	8	0.733
NZ_AP014597_2	2.30\|1863200\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863200-1863229	30	NC_023743	Escherichia phage phiEB49, complete genome	19288-19317	8	0.733
NZ_AP014597_2	2.32\|1863354\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863354-1863383	30	AP014138	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S36-C43, * SEQUENCING IN PROGRESS *	28759-28788	8	0.733
NZ_AP014597_2	2.7\|1861434\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861434-1861463	30	NC_011665	Shewanella baltica OS223 plasmid pS22303, complete sequence	49767-49796	9	0.7
NZ_AP014597_2	2.7\|1861434\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861434-1861463	30	NC_011668	Shewanella baltica OS223 plasmid pS22302, complete sequence	63512-63541	9	0.7
NZ_AP014597_2	2.7\|1861434\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861434-1861463	30	NC_017572	Shewanella baltica BA175 plasmid pSBAL17502, complete sequence	11590-11619	9	0.7
NZ_AP014597_2	2.14\|1861971\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1861971-1862000	30	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	77188-77217	9	0.7
NZ_AP014597_2	2.20\|1862431\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862431-1862460	30	CP009912	Borreliella chilensis strain VA1 plasmid lp54, complete sequence	50384-50413	9	0.7
NZ_AP014597_2	2.20\|1862431\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1862431-1862460	30	NZ_MH113855	Vibrio alginolyticus strain Vb1796 plasmid pVb1796, complete sequence	93637-93666	9	0.7
NZ_AP014597_2	2.28\|1863046\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863046-1863075	30	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	365003-365032	9	0.7
NZ_AP014597_2	2.30\|1863200\|30\|NZ_AP014597\|PILER-CR,CRISPRCasFinder	1863200-1863229	30	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	61563-61592	9	0.7

1. spacer 2.7|1861434|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 6, identity: 0.8

aataattcaccatcattcaaag-agccaata	CRISPR spacer
cataattcagcatcattcaaagtggcccac-	Protospacer
 ******** ************ .*** *.

2. spacer 2.7|1861434|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_021800 (Cellulophaga phage phi46:1, complete genome) position: , mismatch: 6, identity: 0.8

aataattcaccatcattcaaagagccaata	CRISPR spacer
tattcttcaccttcactcaaagagccaaca	Protospacer
 **  ****** ***.************.*

3. spacer 2.13|1861894|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MN693897 (Marine virus AFVG_250M931, complete genome) position: , mismatch: 6, identity: 0.8

tatttcataactggcgacaacgagctgggt	CRISPR spacer
gttttcatcactggcgacaacgggctgctt	Protospacer
  ****** *************.****  *

4. spacer 2.3|1861130|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to AP014205 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C77-MedDCM-OCT-S35-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.759

tatcatataaagattggctgctgttgcaa	CRISPR spacer
tgtagctgaaaggttggctgctgttgcaa	Protospacer
*.* ..  ****.****************

5. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

6. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

7. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

8. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

9. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

10. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

11. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

12. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

13. spacer 2.4|1861206|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 7, identity: 0.759

cagatacaataaaacagtaatatgataac	CRISPR spacer
gtaataaaataaaacagtaatataattat	Protospacer
  .*** ****************.** *.

14. spacer 2.7|1861434|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MN694092 (Marine virus AFVG_250M12, complete genome) position: , mismatch: 7, identity: 0.767

aataattcaccatcattcaaagagccaata	CRISPR spacer
aataatttaccatcattcaaatctcttaaa	Protospacer
*******.*************   *. * *

15. spacer 2.8|1861511|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to KC699836 (Bacillus phage SIOphi, partial genome) position: , mismatch: 7, identity: 0.767

acgtctaagtgtctgaaattgaacaaggga	CRISPR spacer
aaacagaagtgtctaaaattgaagaaggga	Protospacer
* ..  ********.******** ******

16. spacer 2.16|1862124|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_017078 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence) position: , mismatch: 7, identity: 0.767

agatttatcatttatgcgaatatcaacggc	CRISPR spacer
tgatttatcctttatgcgaatagccaatgt	Protospacer
 ******** ************ * *  *.

17. spacer 2.19|1862354|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_017078 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1, complete sequence) position: , mismatch: 7, identity: 0.767

agatttatcatttatgcgaatatcaatagc	CRISPR spacer
tgatttatcctttatgcgaatagccaatgt	Protospacer
 ******** ************ * *  *.

18. spacer 2.20|1862431|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 7, identity: 0.767

ccaacagcaccactaactaataagcttaaa	CRISPR spacer
cttaattcacaactaactaataagctaaaa	Protospacer
*. *   *** *************** ***

19. spacer 2.26|1862892|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP030090 (Lactobacillus reuteri strain YSJL-12 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgtaactgtcatcgaacatatcagacaca	CRISPR spacer
ccatggttgtcatcaaacatatcagacata	Protospacer
.*.*...*******.*************.*

20. spacer 2.29|1863123|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaaggcagcgagaacgaagagggagga	CRISPR spacer
gagcatggcagcgagaacgacgatgcaccc	Protospacer
***** ************** ** * *

21. spacer 2.29|1863123|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaaggcagcgagaacgaagagggagga	CRISPR spacer
gagccaggctgcgagaacgaagacgacgcc	Protospacer
**** **** ************* *. *

22. spacer 2.29|1863123|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaaggcagcgagaacgaagagggagga	CRISPR spacer
aagcagggcagcgagaacgaagcatgggta	Protospacer
.****.**************** . *.* *

23. spacer 2.29|1863123|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 7, identity: 0.767

gagcaaggcagcgagaacgaagagggagga	CRISPR spacer
gagccaggctgcgagaacgaagacgacgcc	Protospacer
**** **** ************* *. *

24. spacer 2.3|1861130|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to CP008937 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00001, complete sequence) position: , mismatch: 8, identity: 0.724

tatcatataaagattggctgctgttgcaa	CRISPR spacer
cgcagcattaagattggctgctgttacaa	Protospacer
... ..** ****************.***

25. spacer 2.10|1861665|29|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to MT657334 (Microbacterium phage Stormbreaker, complete genome) position: , mismatch: 8, identity: 0.724

aacgataagtgagtacgtagaagcgaaat	CRISPR spacer
gacgatgagtgagtacgcagaagccttca	Protospacer
.*****.**********.******

26. spacer 2.11|1861741|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_026611 (Edwardsiella phage GF-2 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

tctactacctcgtaatggacgtccaagcct	CRISPR spacer
tctcctacctcgtaatgcacgtcgcggatc	Protospacer
*** ************* *****  .* ..

27. spacer 2.11|1861741|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.733

tctactacctcgtaatggacgtccaagcct	CRISPR spacer
agctccacctcgtaatggacgccgaagccg	Protospacer
  . *.***************.* *****

28. spacer 2.22|1862584|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to KC522412 (Lactococcus phage CaseusJM1, complete genome) position: , mismatch: 8, identity: 0.733

gttaggataaatagctgtaaaaccaacgag	CRISPR spacer
attaggataaatagttgtgaaaccgtcctt	Protospacer
.*************.***.*****. *

29. spacer 2.28|1863046|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP024789 (Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence) position: , mismatch: 8, identity: 0.733

cgaagtaaataaataacaacaacggagggg	CRISPR spacer
agaagtaaataaataagaacatcggtttta	Protospacer
 *************** **** ***    .

30. spacer 2.28|1863046|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.733

cgaagtaaataaataacaacaacggagggg	CRISPR spacer
aaaattaaataaataacaaaaacggggata	Protospacer
 .** ************** *****.*. .

31. spacer 2.29|1863123|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to CP054922 (Streptomyces sp. NA03103 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gagcaaggcagcgagaacgaagagggagga	CRISPR spacer
ccgttcggcagcgagcacggagagggaggg	Protospacer
  *.  ********* ***.*********.

32. spacer 2.30|1863200|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_023743 (Escherichia phage phiEB49, complete genome) position: , mismatch: 8, identity: 0.733

gccgacaatggcgttgttataaacgacccc	CRISPR spacer
ggcagcaatggcgttgctataaacgagtaa	Protospacer
* *..***********.********* .

33. spacer 2.32|1863354|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to AP014138 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S36-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tgtgtcctaacaatgtagctctgtttactg	CRISPR spacer
aagttgctaacaatgtagctacgtttacta	Protospacer
 .  * ************** .*******.

34. spacer 2.7|1861434|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_011665 (Shewanella baltica OS223 plasmid pS22303, complete sequence) position: , mismatch: 9, identity: 0.7

aataattcaccatcattcaaagagccaata	CRISPR spacer
ttcacatcaccatcattcaatgagccagat	Protospacer
  .*  ************** ******.

35. spacer 2.7|1861434|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_011668 (Shewanella baltica OS223 plasmid pS22302, complete sequence) position: , mismatch: 9, identity: 0.7

aataattcaccatcattcaaagagccaata	CRISPR spacer
ttcacatcaccatcattcaatgagccagat	Protospacer
  .*  ************** ******.

36. spacer 2.7|1861434|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_017572 (Shewanella baltica BA175 plasmid pSBAL17502, complete sequence) position: , mismatch: 9, identity: 0.7

aataattcaccatcattcaaagagccaata	CRISPR spacer
ttcacatcaccatcattcaatgagccagat	Protospacer
  .*  ************** ******.

37. spacer 2.14|1861971|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 9, identity: 0.7

aagcaagccaacaaggtggtaaatattata	CRISPR spacer
gagcaagccaaaaaggtggtaacagagctt	Protospacer
.********** **********  .   *

38. spacer 2.20|1862431|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to CP009912 (Borreliella chilensis strain VA1 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.7

ccaacagcaccactaactaataagcttaaa	CRISPR spacer
acaacagcaccaccaactaatagaagaagt	Protospacer
 ************.********..   *.

39. spacer 2.20|1862431|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_MH113855 (Vibrio alginolyticus strain Vb1796 plasmid pVb1796, complete sequence) position: , mismatch: 9, identity: 0.7

ccaacagcaccactaactaataagcttaaa	CRISPR spacer
tatgcaacatcactaactaataagcttctt	Protospacer
.  .**.**.*****************

40. spacer 2.28|1863046|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 9, identity: 0.7

cgaagtaaataaataacaacaacggagggg	CRISPR spacer
ttaattaaataaataacaccaacgggacct	Protospacer
. ** ************* ******..

41. spacer 2.30|1863200|30|NZ_AP014597|PILER-CR,CRISPRCasFinder matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 9, identity: 0.7

gccgacaatggcgttgttataaacgacccc	CRISPR spacer
atcgacaatgatgttgttataaacgcaata	Protospacer
..********..*************   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1671133 : 1729752

Bacillus_phage(50.0%)

transposase,integrase

attL 1670773:1670832|attR 1730054:1730414

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1670773:1670832	attL	NA	NA	NA	NA
WP_096405349.1\|1671133_1672363_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.6e-26	36.1
WP_096405348.1\|1672375_1673620_+\|integrase	site-specific integrase	A0A218M9P0	Mycobacterium_phage	3.6e-05	25.0
WP_096405347.1\|1673616_1674021_+	hypothetical protein	NA	NA	NA	NA
WP_096405346.1\|1674085_1675393_-	hypothetical protein	NA	NA	NA	NA
WP_007410958.1\|1675394_1676174_-	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
WP_096405345.1\|1676203_1678582_-	MMPL family transporter	NA	NA	NA	NA
WP_096405344.1\|1678907_1680635_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-40	28.1
WP_096405343.1\|1680660_1682415_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.7e-27	23.5
WP_096405342.1\|1682447_1683062_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_172419412.1\|1683977_1684133_-	hypothetical protein	NA	NA	NA	NA
WP_148664602.1\|1684811_1685102_+	hypothetical protein	NA	NA	NA	NA
WP_096405341.1\|1685650_1686619_+	toprim domain-containing protein	NA	NA	NA	NA
WP_096405340.1\|1686623_1687085_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_096405339.1\|1687447_1687879_+	hypothetical protein	NA	NA	NA	NA
WP_096405338.1\|1687862_1688942_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_096405849.1\|1689337_1689523_-	hypothetical protein	NA	NA	NA	NA
WP_096405852.1\|1690831_1692049_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_096405855.1\|1692175_1693108_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_096405863.1\|1694279_1695005_-	hypothetical protein	NA	NA	NA	NA
WP_096405866.1\|1695078_1695540_-	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_112199952.1\|1695536_1696439_-	hypothetical protein	NA	NA	NA	NA
WP_096405871.1\|1696419_1698219_-	type IV secretion protein Rhs	NA	NA	NA	NA
WP_044047448.1\|1698438_1698837_-	hypothetical protein	NA	NA	NA	NA
WP_096405876.1\|1699407_1700037_-	hypothetical protein	NA	NA	NA	NA
WP_096405879.1\|1700119_1700944_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_096405882.1\|1701155_1701680_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_096405885.1\|1701831_1702488_-	hypothetical protein	NA	NA	NA	NA
WP_096405888.1\|1702525_1703293_-	Omp28 family outer membrane lipoprotein	NA	NA	NA	NA
WP_096405891.1\|1703305_1704979_-	hypothetical protein	NA	NA	NA	NA
WP_024998745.1\|1704988_1705477_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_148664608.1\|1705581_1707465_-	Omp28-related outer membrane protein	NA	NA	NA	NA
WP_096405897.1\|1707585_1709949_-	C10 family peptidase	NA	NA	NA	NA
WP_096405903.1\|1710194_1711133_-	hypothetical protein	NA	NA	NA	NA
WP_096405338.1\|1711943_1713023_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_096405339.1\|1713006_1713438_-	hypothetical protein	NA	NA	NA	NA
WP_096405340.1\|1713800_1714262_-	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_096405341.1\|1714266_1715235_-	toprim domain-containing protein	NA	NA	NA	NA
WP_148664602.1\|1715783_1716074_-	hypothetical protein	NA	NA	NA	NA
WP_172419412.1\|1716752_1716908_+	hypothetical protein	NA	NA	NA	NA
WP_096405342.1\|1717823_1718438_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_096405343.1\|1718470_1720225_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.7e-27	23.5
WP_096405344.1\|1720250_1721978_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-40	28.1
WP_096405345.1\|1722303_1724682_+	MMPL family transporter	NA	NA	NA	NA
WP_007410958.1\|1724711_1725491_+	outer membrane lipoprotein-sorting protein	NA	NA	NA	NA
WP_096405346.1\|1725492_1726800_+	hypothetical protein	NA	NA	NA	NA
WP_096405347.1\|1726864_1727269_-	hypothetical protein	NA	NA	NA	NA
WP_096405348.1\|1727265_1728510_-\|integrase	site-specific integrase	A0A218M9P0	Mycobacterium_phage	3.6e-05	25.0
WP_096405349.1\|1728522_1729752_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	3.6e-26	36.1
1730054:1730414	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_AP014597.1|WP_096404918.1|352669_353086_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_AP014597.1|WP_023926096.1|533508_533919_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_AP014597.1|WP_096404918.1|352669_353086_-|PcfK-like-family-protein

352669_353086_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5886524822695035	1	1.0

NZ_AP014597.1|WP_023926096.1|533508_533919_-|PcfK-like-family-protein

533508_533919_-

136 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5214285714285715	1	0.9929078014184397

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP014598

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

2. NZ_AP014597

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information