CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023466	Pseudomonas frederiksbergensis strain KNU-15 chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,DinG,WYL,PD-DExK	0	0	6	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023466_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023466_1

32507-32649

Orphan

Consensus_repeat	Method
TTGTGACAATCTTTATTGTTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP023466_1

>merge|NZ_CP023466|1|32507-32649|PILER-CR
TTGTGACAATCTTTATTGTTTGCAGCGGAGACATTCTTTTGGAGATTTGAAGTTTTGTGACAAACTTTATTTGCACAGTGCTAGCTCAGTGGTGACCTACAGGCCACGGAATACGCAGCAGACTGTGACAATCTTTATTGTTT

>NZ_CP023466|1|1|32507-32649|PILER-CR
TTGTGACAATCTTTATTGTTT	GCAGCGGAGACATTCTTTTGGAGATTTGAAGTT
TTGTGACAAACTTTATTTGCA	CAGTGCTAGCTCAGTGGTGACCTACAGGCCACGGAATACGCAGCAGACTGT
GACAATCTTTATTGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023466.1\|WP_028940081.1\|32715_33618_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176160
NZ_CP023466.1\|WP_157755451.1\|29097_29451_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_019580350.1\|36909_37287_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_096479332.1\|38596_40729_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_019580353.1\|40732_41362_-\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP023466.1\|WP_096479326.1\|27597_28464_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|110924
NZ_CP023466.1\|WP_019580354.1\|41506_41980_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP023466.1\|WP_018927332.1\|33749_34376_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198315
NZ_CP023466.1\|WP_096479329.1\|32222_32432_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_096479331.1\|37416_38610_+\|DUF3142-domain-containing-protein	unknown	unknown	gnl\|CDD\|371478
NZ_CP023466.1\|WP_157755450.1\|26854_27385_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_157755449.1\|26175_26739_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_096479328.1\|30314_32186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_096479333.1\|42025_43426_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180409
NZ_CP023466.1\|WP_157755448.1\|25533_26049_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_157755447.1\|23069_25157_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
NZ_CP023466.1\|WP_096479330.1\|34439_36470_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|99781
NZ_CP023466.1\|WP_019580348.1\|20529_22362_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP023466.1\|WP_096479327.1\|29462_30086_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023466.1\|WP_028940086.1\|43637_45602_+\|protease-modulator-HflK	unknown	unknown	gnl\|CDD\|259802

Protein	Function_ID	Function_description	E-value
NZ_CP023466.1\|WP_028940081.1\|32715_33618_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176160	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 2. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.23571e-105
NZ_CP023466.1\|WP_018927332.1\|33749_34376_+\|glutathione-S-transferase	gnl\|CDD\|198315	cd03206, GST_C_7, C-terminal, alpha helical domain of an unknown subfamily 7 of Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.	1.59236e-48
NZ_CP023466.1\|WP_019580353.1\|40732_41362_-\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	3.30099e-44
NZ_CP023466.1\|WP_096479331.1\|37416_38610_+\|DUF3142-domain-containing-protein	gnl\|CDD\|371478	pfam11340, DUF3142, Protein of unknown function (DUF3142). This bacterial family of proteins has no known function.	1.1965e-103
NZ_CP023466.1\|WP_157755447.1\|23069_25157_-\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	1.9392e-14
NZ_CP023466.1\|WP_028940086.1\|43637_45602_+\|protease-modulator-HflK	gnl\|CDD\|259802	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prokaryotic HflK (High frequency of lysogenization K). Although many members of the SPFH (or band 7) superfamily are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this SPFH domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflK is an integral membrane protein which may localize to the plasma membrane. HflK associates with another SPFH superfamily member (HflC) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection.	7.34166e-58
NZ_CP023466.1\|WP_096479333.1\|42025_43426_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180409	PRK06115, PRK06115, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP023466.1\|WP_096479330.1\|34439_36470_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|99781	cd06184, flavohem_like_fad_nad_binding, FAD_NAD(P)H binding domain of flavohemoglobin. Flavohemoglobins have a globin domain containing a B-type heme fused with a ferredoxin reductase-like FAD/NAD-binding domain. Flavohemoglobins detoxify nitric oxide (NO) via an NO dioxygenase reaction. The hemoglobin domain adopts a globin fold with an embedded heme molecule. Flavohemoglobins also have a C-terminal reductase domain with bindiing sites for FAD and NAD(P)H. This domain catalyzes the conversion of NO + O2 + NAD(P)H to NO3- + NAD(P)+. Instead of the oxygen transport function of hemoglobins, flavohemoglobins seem to act in NO dioxygenation and NO signalling.	1.60997e-93
NZ_CP023466.1\|WP_019580348.1\|20529_22362_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP023466.1\|WP_096479326.1\|27597_28464_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|110924	pfam01972, SDH_sah, Serine dehydrogenase proteinase. This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan.	3.06983e-11
NZ_CP023466.1\|WP_019580354.1\|41506_41980_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.45172e-49

>NZ_CP023466.1|WP_096479329.1|32222_32432_-|hypothetical-protein
MLMLIANWGSPCQLQFELGALLIPDLVIRYPAVKLNESVSVFNRRDSCHWVNAQSAIIFKPYLAKIYLP
>NZ_CP023466.1|WP_096479328.1|30314_32186_-|hypothetical-protein
MKKLKRIINIAEPSIEEKILGDHRFLDIRSYFSFDFSIFSLPPVAHPPNNDGIDKFKIFKKKLKAERTGLAKKLYKAWKPNDVSDKFIQYSKFLMQVPARKFEFSMLLKNLTNFEEHCKLCISEHSVDAQSLITIGLPTLIEPTYFWSASIDADQKKVLIQRVEETISNVTNSLPLRSLPSGSAEFKSYLLLTYVIFTEFCSIGLSSNIFTKHLLYFRQKSITNWLNLSASERLQYAVISLHVFFRFFNPNEPFSTKYGFSHNTFSDLHSLLNDAHDASTKLGLVTTGQVFMYLLERIETEALAYTDLTAGRRALKGLTPGEKASMVELVRRFSSYRIPVTAERVEHFLIQFKTTARIRAAIKLLNHLKFYPLWQLGESIEAILTEQKKKFGKLVVSPLGDRTGSTAIINYLVSHSNLKDIIFADDLSHALSLTQEGDRIYFVDDCALSGTQSIHIMQELMGERELKPHHTKHCDPLSSEEQNAVCKRMLVFTYCLACDIAVERMQTQISTIHNSQINIEILNGIPEPSEAKTFSTASSVPWESAEERDELKKFCAEVGYTLLEKMSTDKNWTDERRIESSLGFSDFQRVLVFPYSVPKTSLPLLWLNGNSNFRWTPLFPVND
>NZ_CP023466.1|WP_096479327.1|29462_30086_+|hypothetical-protein
MPEKVSKAFGVEVASLPKELIDQAKCFVRLYALKHGAFPPGTDSPEKLDYLEKMKQPFYTGLAAVILHYLKIRRKSINIEVPGETYPSVPVFKAFKNALRDAGVNLGCSVERNDPALKSLLNTMDTKALSYVLSLFSYTANADDGHTTFLRMDYVGEQARVKIERSAFLSQLPQALKGYSCETAYALMRSYTLHLIQNTHNPLMSIA
>NZ_CP023466.1|WP_157755451.1|29097_29451_+|hypothetical-protein
MIFADWYWVSVASATGSIRRQRQHKANGWVDPGKGYAFWPAHVLPSYGTSEAINIARKALFDHMEGFPADAQKDMARVRLLKDFFLDSESSFWEEMNALYTQLESELPEESASLTCV
>NZ_CP023466.1|WP_096479326.1|27597_28464_+|ATP-dependent-Clp-protease-proteolytic-subunit
MPSLDNHILIALTHYRGLIAKHFGCSLLAYSGPIHPAVQSAYVNAIEELVQHRADTENPNRICIVIATPGGVVEAVEKMVEVTRHHFNEVFFVVPTAAMSAGTIFCMSGDKIFMDYTSSLGPIDPQVPLADGQLVPALGYIDKVNQLIEKSAAGSLTDAEFMMLQRLDLATLRRYEQARDLSVSLLKLWLVKYKFKDWTVHGCTNPGTAVSEAEKEARAEQIAKDLSDNNRWHSHGRMIGINTLTGGLKLKIEDYTDDQELRQNLRVYSELIAEHAERQRSAFMLHYT
>NZ_CP023466.1|WP_157755450.1|26854_27385_+|hypothetical-protein
MLSFDMSLALTRSSGIHSGLHGLDTSSPRGINMLYRGVSLAIHTESAGTIKVNGDQGEIIPLHDGKARYDGTFTYGASEENAVNAQQIETGTWGSAFISTTRDKKTAEYFATHDRDGNTVPGVVYWIDDTLFEQHGLVAIESQQPNYPEEREVSIRPSSGRIIPSEVIIRIEHIDS
>NZ_CP023466.1|WP_157755449.1|26175_26739_+|hypothetical-protein
MNSKFLTRQISAIESMRLPRNLCGYIFAIGMDRQYFTDYSEWQQYCVLYKAMVALQGQVGFAILAARIIAFTEKTRPKSSLATPKPAQRLTKKERRRLGQEGPDHSPSKAERHLAKELRRAKPTPSKTIEDWNASPKIGLGIKSTMPPPPKTRRDQVKLDAHTSPPHQNDPSHILYVAGWTMAEDEN
>NZ_CP023466.1|WP_157755448.1|25533_26049_+|hypothetical-protein
MTNEIIFYTQIASIVTFIIALFTVYNVLVQAKDAAIQLLKERLIIKDEQIAALKAQTPDTLVSILNDRIKVTQEEIGRLKNDGDMHRIEIDLKEEELRGIQNKLSALSELIRESDFVCPECGDPLAGRQSHTIYGGADGEQEADILISSYECGYSIADDGRELSRCQHQAR
>NZ_CP023466.1|WP_157755447.1|23069_25157_-|ATP-binding-protein
MAFQAGGSLSHPFCHHSPKGECSLEKEFAAFDFSGTNAITHSGIQKHFKSVEPWQAIAELVWNGFDAAANTVKVEVTENEAHGTDLVTVLDDGVGVNFRKPHENFRRFNDSLKKDSYDTHGSQGRGRLAFSKIGSSATWYTRHEGEDAKITVVSSNLSDIVGVTIPQESTHALLVPQSQGTCVEIRGFKKTLPIEQALLKDFSKEFGGHLILLPHKSLLLNGKKVTPQSHTVYKHSVTVDEQEFCIELIRWHNRPGSEKSYVNFVSSSLKVLGKQLSSLNKKPEYFTSVYVRSELFDRYSSVDQGLSEPFTNFYSTKAFRGLSKSLNEFLRDNYSEFLIQQAEEEVSRYEQEGDFPDYADLDSAESVWRLNHLKGIVKSVIIRDPTVLMRSTKRQRRLIIRLLDKLSVSNENDGMLEVLESVLSLDAGSMRQFATQLNKTKLNNIIETIEVLQNREHAIAQLKQIINVHYREVLETPDLQKVIENNTWLFGPSYDILGAEEDSFTKISERLRAEVTGAGIVEEMDLEIGVDLVGAKRQVDLFLARKKPDFDSRGRKYFRCVIIEIKRPGISLNNKHLQQLDEYASVLSNDPVFNSEHVKFELILVGRNISSKGSQIHSRCRGMQIHGEPGLVTSDDKVKAYVKTWATIFDEFELTNDYLLEKLKTQRADLDGVSKKDLIADLQGQETPVPTALDA
>NZ_CP023466.1|WP_019580348.1|20529_22362_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGAVAERNITAILLEGLKRLEYRGYDSAGVAVYTNDEKLLRLRRPGKVSELEQALIEEPLVGRLGIAHTRWATHGAPCERNAHPHFSGDLAVVHNGIIENHEALREQLKALGHVFTSDTDTEVIAHLLNEKLKEQPDLTAALKATVKELHGAYGLAVISARQPDRLVAARSGSPLVIGLGLGENFLASDQLALRQVTDRFMYLEEGDIAEIRRDSVQIWDINGTLVERESVQYRDGAEAADKGEFRHYMLKEIHEQPAVVQRTLEGRLSQNQVLVQAFGPQAAELFAKVRNVQIVACGTSYHAGMVARYWLEELAGIPCQVEVASEFRYRKVVVQPDTLFVSISQSGETADTLAALRNAKELGFLSSLAICNVGISSLVRESDLTLLTQAGREIGVASTKAFTTQLVGLLLLTLALGQVRGTLAAGVEATLVEELRRLPTRLGEALAMDSTVEKIAELFAEKNHTLFLGRGAQFPVAMEGALKLKEISYIHAEAYPAGELKHGPLALVDNDMPVVTVAPNNELLEKLKSNLQEVRARGGELIVFADEQAGMTNGEGTHVVHMPHIHDILSPILYTIPLQLLSYYVAVLKGTDVDQPRNLAKSVTVE
>NZ_CP023466.1|WP_028940081.1|32715_33618_+|LysR-family-transcriptional-regulator
MDRFQEMQVFAAVAQDQGFSAAARRLGMSAASVTRAVAALEQRIGTQLLTRTTRSVHLSEAGQRYLEDCRRILAEVQEAEDSAAGSHAQPRGQLTITAPVLFGDLFVTPLMVGYLTQFPEVSINAVLVDRVVSMVEEGIDVAVRIGELPDSNQHAIRVGEVRRVICASPGFLTDHGRPRHPADLSRAPIIATSSIGQPRSWPFLEAGEPVSVRPEPRLVVSANQAAITAAAMGLGLTRVLSYQVASKIATGELEIVLADFELPPLPIHVVYQGGRKAPTRVRSFVDFAVKGLREHPALHG
>NZ_CP023466.1|WP_018927332.1|33749_34376_+|glutathione-S-transferase
MQAIKLYNFPRSGHAHRVELMLSLLQLPTELIFVDLAKGAHKQADFLALNPFGQVPVIEDQGMVLADSNAILVYLAQKYGNGRWLPTDPVGAAKVQRWLSVAAGPIAFGPGRARLITVFGAPYNAEEVIAYSHTWLKVIDQELGATAYLAGSEPTIADIAAYSYIAHAPEGNVSLDDYANIRAWLARVEALPGFVGMPRTIAGLQKTA
>NZ_CP023466.1|WP_096479330.1|34439_36470_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MERSPWHAGEKKLQAHVGVVERMEALGRRVIRGEMPDQHRTFYQQLPFMLYGAVDADGNPWASILEGAPGFAKSPEPGLLQIGSLPGRDDPAQLQDGAAIGLLGIELHTRRRNRLNGRVGAVTASGFEVTVEQSFGNCPQYIQLRQFRSVPLADPETRIAQHLNGLDDTAKAMIASADTFFVASYVDVDGQRSVDVSHRGGQAGFVQIEGNRLTIPDFAGNLFFNTLGNLLINPRAGLLFIDFDSGDLLHLSGRTQVILEGPQIEAFQGAERLWTFEVEHAVRRPAALALRWRFDGVSPTSLLTGTWAQANARLQAQALGNRWRPLRVTRIERESHNIRSIYLEPADGAGLPVFQAGQHLPLRFNIAGDVHIRTYSLSSAPSDDFFRISVKREGLVSSHLHEQIRVGDVLEARSPQGHFTVAPNERRPLVLLAAGVGITPLLSMLREVVYQGLRTRRIRPVWFFQSSRTLADQPFRPELDRLLDGLGDEVRVLRLLSQPESDAREGEDYDLTGRIDADLLKTTLEVEDYDQVDFVLCGPGSFTQGLYGSLRDLDVPDSRIHAETFGPSTLRRKPDPDAVVIEQLPAATVSVPVVFQRSAKEARWQPDGGSLLELAESRGLRPEFSCRGGSCGTCKTRLISGEVNYPQPPAEAPDAGEVLICCAVPAQGSQPLVLDL
>NZ_CP023466.1|WP_019580350.1|36909_37287_+|hypothetical-protein
MFKATPNPPEADDVSPYESLDSKKLNEAAERALDHYLNPSALKAPVARKPSTMFMVAPDIKDEDLLAHTCESLAQASVMASDFAGYLQGPHRHTAMAIQQIVMLAELAVNRMLDNVAIPKPAPHS
>NZ_CP023466.1|WP_096479331.1|37416_38610_+|DUF3142-domain-containing-protein
MVFFTRLIVLLAALLLNGCEQSDAPPLDQQLYVWQRQWTPAHDAALRDSHTDFSTLRVLALQAFPQSGWSRARIDPALLKRDGRPLIAVVRLDGQLNGLDRDEVTAQIQQVLSDWQGQGLILSGVEIDHDAGNARLPAYREFLTHLRGVLPASLPLSITALPAWLDSSELPALLATVDSCVLQVHAVSDPRRGLFDPDQARQWARAWSRNTSKPFYLALPAYGVALLPGAGGAPVVESEVPIEQGGERRELLADPQQLSKLGAELRADPPAHLAGLIWFRLPLANDRRAWSLTTLIAVARGDTLDSRMGLKLSAQDGLYDISLSNQGNLDSVWPERLTLAVQGCEGADALAGYALQQRPDLLTFTRLRDGRIPAGGQRAIGWARCAHIDQGGSNVYP
>NZ_CP023466.1|WP_096479332.1|38596_40729_+|hypothetical-protein
MFTRNWPRHVLCLSLSLPLGSALACGPDFPMRLLDNRGQSLAELPEGNFNLEISRLGHAIAGLKNVTAATNIPGDGYGDAPDYTHQRDTAEQAGLTPEQQALVKQLRSLTDARQVEEQGANLPAEYRLYLAGAVAFNAGDHGLAADYFQKVLALPAEQRPLRSTWAAYSLGRALFAMNSEAGATPDLLAQSRKAFEQTRQLSIDGFSDPLELGVASLGEEARVARTAGDWDNAIQLYATQNLHGSAVGYTSLKLLMADLAAMPDEQLAGLLKGKAVQQLVTASLISRLGWSFGDQPPNEQKLIKLLQSSTRGSLDNADRLAAMNYQQGDYASAKAFLEQAGDGGLAWWLRAKLAVRDGDKNAAAAAYAKAAQAFPQNESWGERRTPDWDYETLQPKCRVEGESAILALQRGDYLQAFDQLYRSQGIYWFDAATVAERVLTLDELKQYVDTQVPAPPPLSQQDRDNYVPLPVAASLRNLLGRRLLREERYDEAPAYFDNPDLQAKAKWYGQLRKEAESKWWPTSKASAYYYAATLARYDGMELLGYEMSPDYVTFGGNYSLEAPELKVGPLMTEGEVQRQQATVAQPDERFHYRYVATALASKAADHLPHSSQAFASVLCKASGWGTNLQEQSAFYRRYVEEGPFVVWAGDFGHQCQEPDFRNADKRYVTQVTDAMRSTLRPYKKTLQIGAVLAVTAAALLLISRRRRKAR
>NZ_CP023466.1|WP_019580353.1|40732_41362_-|LysE-family-translocator
MTELWLFFMALTVVYLLPGPDMILLLQTGARQGKGAALATALGLGVARGCHVALAALGLATLFRTAPWTFDVVRLAGAAYLLWIGIQCLRTTMLPSLNGADATTDKPRWPEAIQRGLLTNLLNPKALLFCSVLLPQFINPQAGPVLAQFATLGMMLVGVGLLFDSAYALVGAALGRWLQRSPSAQRVQQWLFGSLLIGFAVRLTFVQQA
>NZ_CP023466.1|WP_019580354.1|41506_41980_+|Lrp/AsnC-family-transcriptional-regulator
MKLDAYDRKILTALQRDGRLSNVQLADEIGLSASPCLRRVRMLEEAGVIRGYQANLDRDEVGLGLTVFVGVKVERHNDEQAEAFRLAVTALPEVISAFLVSGESDFLLQVVVPDLRAYDRFLTGRLLKLPGVSDIRSNFAIHTVKTPGALPLGHLPD
>NZ_CP023466.1|WP_096479333.1|42025_43426_-|dihydrolipoyl-dehydrogenase
MSTYDVVILGAGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASELYDAAMGAEFANLGIEVKPVLNLAQMMKQKDESVTGLTKGIEFLFRKNKVDWIKGWGHIDGPGSVTVTDNQGGKIQLSAKDIIIATGSEPTPLPGVDIDNQRILDSTGALSLAEVPKHLVVIGAGVIGLELGSVWRRLGAQVTVVEFLDRICPGVDAEAGKTLQRSLSKQGIRFKLSSKVTSATSSASGVQLSVEPAAGGTAELLEADYVLVAIGRRPYTQGLGLENVGLATDKRGMLANKGHRTEAAGVWVIGDVTSGPMLAHKAEDEAMACIEQIVGKAGEVNYDLIPSVIYTKPELASVGKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVLADERTDEVLGVHLVGPSVSEMIGEYCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGMATQI
>NZ_CP023466.1|WP_028940086.1|43637_45602_+|protease-modulator-HflK
MQVDLDGDGAQIAGLPRFQQAVVQGRRLRQWAIGLGALAAAGLVLAFFVGLFAPQSLWPALLVNQSAGLLVLVAGLQSAWWVTQWRARAMNPAALVPVAITEEVVVAEGWYERLLDGISQRWLRLLGQIGAPTLWLGGWALLSLYSIEQVWNLALPPAALGLSASVGAALSLLLAFGLLVLERQLAQENVAQWPEAGSLAQLARVAIIGLVLSALCLLFGSETAVWPVRLAVLIGLLPGLVAIELLLRAVLSLFSPRREQLEPTLLARSFVADMLRWPPQPLLALQHELHNRFGIDLRQIWAFTYMRRAFLPVLAVVAIVGWSLTGIHEIPLQGRGIYERFGKPVEVFGPGLHAGLPWPLGRVLSVENGVVHELATSVGEASAPVAAEPAEGPAPAIANRLWDASHVNDKSQVIASSRADKQSFQIVNMDVRFVYRIGLSDQAALAATYNSADVPTLIRSTASRILVHDFASRTLDGLLGEDRVGLSEEIGRAVQADLRKLDSGVEILATVVEAIHPPAGAANAYHGVQAAQIGAQALISRERGAAAEATNQAQLQASIARDQATASAHEINSSAQAADLKFAAERKAYSSAGQAFVLEQYLSQLTQGLANAKLLVLDHRLGGSSNAPTIDLRTFTLPADPAPSRNTAQPGAAH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

122112 : 178319

uncultured_Caudovirales_phage(28.57%)

transposase,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096479351.1\|122112_123135_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_019580405.1\|123658_124528_-	SEL1-like repeat protein	NA	NA	NA	NA
WP_096479352.1\|124536_128910_-	RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	3.4e-26	37.0
WP_019582924.1\|129006_129288_-	hypothetical protein	NA	NA	NA	NA
WP_096479353.1\|129290_133742_-	RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.8e-27	50.4
WP_019580407.1\|133754_134189_-	DUF1795 domain-containing protein	NA	NA	NA	NA
WP_096479354.1\|134207_136145_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.3e-41	27.3
WP_096479355.1\|136193_138872_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	9.8e-85	32.5
WP_026331811.1\|138864_139917_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_019580412.1\|141735_142248_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_169342489.1\|142241_142661_-	hypothetical protein	NA	NA	NA	NA
WP_019580414.1\|142750_143191_-	hypothetical protein	NA	NA	NA	NA
WP_028939182.1\|143187_143646_-	hypothetical protein	NA	NA	NA	NA
WP_018927416.1\|143727_144216_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_018927417.1\|144302_145796_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_007894500.1\|145811_146321_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_028939181.1\|146401_147439_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_096479356.1\|147843_149280_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_019580418.1\|149355_149862_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_019580419.1\|149877_151212_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_019580420.1\|151218_152517_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_096479357.1\|152513_156014_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_019580422.1\|156010_156661_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_026331813.1\|156673_157393_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_028939178.1\|157389_160422_+	protein kinase	A0A292G230	Feline_leukemia_virus	6.9e-18	28.9
WP_096479358.1\|160421_161138_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.9e-15	32.8
WP_096479359.1\|161137_162334_+	hypothetical protein	NA	NA	NA	NA
WP_019580427.1\|162326_164054_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_019580428.1\|164138_165068_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_019580430.1\|165326_165686_-	hypothetical protein	NA	NA	NA	NA
WP_096479360.1\|165699_166368_-	DUF2931 family protein	NA	NA	NA	NA
WP_096479361.1\|166360_169816_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.5e-37	27.6
WP_019580434.1\|170542_172099_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_019580435.1\|172131_172635_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_019580436.1\|172663_174139_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_096479362.1\|174151_174559_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_096479363.1\|174569_175070_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_096479364.1\|175279_175909_+	hypothetical protein	NA	NA	NA	NA
WP_019580439.1\|175898_176243_+	hypothetical protein	NA	NA	NA	NA
WP_096479365.1\|176531_178319_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_2

519247 : 577408

Burkholderia_phage(28.57%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019580663.1\|519247_520951_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.4e-49	29.7
WP_018928768.1\|521155_522628_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_018928769.1\|522738_523332_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_026345942.1\|523655_525662_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.1e-19	27.1
WP_018928771.1\|525919_527098_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-25	37.1
WP_018928772.1\|527094_527940_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_018928773.1\|528006_528954_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_018928774.1\|529390_530767_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_007975492.1\|531257_532361_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_019580667.1\|532425_532689_-	hypothetical protein	NA	NA	NA	NA
WP_019580668.1\|533074_534238_-	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_096479438.1\|534906_535872_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_019580671.1\|536013_536901_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_007937989.1\|537001_537946_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019650277.1\|538156_539104_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_019580672.1\|539130_539547_-	DUF3010 family protein	NA	NA	NA	NA
WP_019650279.1\|539579_539903_-	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	5.7e-32	68.5
WP_096479439.1\|539886_540141_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	2.2e-23	63.1
WP_157755454.1\|540139_540307_+	hypothetical protein	NA	NA	NA	NA
WP_018928783.1\|540353_540755_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_007907542.1\|540990_541968_+	dipeptidase	NA	NA	NA	NA
WP_007926354.1\|542046_542577_+	hypothetical protein	NA	NA	NA	NA
WP_019580673.1\|542592_544653_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_019580674.1\|544826_546776_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_064620846.1\|546775_547996_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_018928786.1\|548011_548788_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_019580676.1\|548887_549454_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_096479440.1\|551153_554606_+	GMC family oxidoreductase N-terminal domain-containing protein	NA	NA	NA	NA
WP_096479441.1\|554814_556683_+	hypothetical protein	NA	NA	NA	NA
WP_096479442.1\|556709_557954_+	metallophosphoesterase	NA	NA	NA	NA
WP_096479443.1\|558002_559298_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_019580682.1\|559581_560682_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_019580683.1\|560774_561185_-	hypothetical protein	NA	NA	NA	NA
WP_019580684.1\|561446_562271_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_018928794.1\|562567_563608_-	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_096479444.1\|563735_564452_+	conjugal transfer protein TraX	NA	NA	NA	NA
WP_019580686.1\|564768_566022_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	7.8e-101	53.2
WP_007936415.1\|566045_567296_+	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_007907563.1\|567310_567640_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_018928797.1\|567636_570654_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_019580687.1\|570712_571345_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_018928799.1\|571543_572401_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_019580688.1\|572539_573739_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	7.1e-11	27.9
WP_019580689.1\|573810_574335_-	DUF3757 domain-containing protein	NA	NA	NA	NA
WP_096479445.1\|574491_574701_-	hypothetical protein	NA	NA	NA	NA
WP_096479446.1\|574785_574941_-	cold-shock protein	NA	NA	NA	NA
WP_019580692.1\|575158_575773_+	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_096479447.1\|575774_576659_-	acyltransferase	NA	NA	NA	NA
WP_096479448.1\|576901_577408_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_3

1263526 : 1367654

101

Pseudomonas_phage(52.17%)

tail,lysis,holin,plate,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_018927036.1\|1263526_1263919_-\|protease	protease inhibitor I42 family protein	NA	NA	NA	NA
WP_096479594.1\|1264084_1264495_-	hypothetical protein	NA	NA	NA	NA
WP_007940472.1\|1264768_1265458_-	DUF4197 domain-containing protein	NA	NA	NA	NA
WP_018927034.1\|1265513_1265912_-	YbaY family lipoprotein	NA	NA	NA	NA
WP_018927033.1\|1266014_1266407_-	hypothetical protein	NA	NA	NA	NA
WP_096479595.1\|1266582_1269078_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_007940478.1\|1269313_1269523_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	3.4e-09	50.8
WP_018927031.1\|1269617_1269995_-	hypothetical protein	NA	NA	NA	NA
WP_018927030.1\|1270090_1270900_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_028939204.1\|1270899_1272051_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
WP_026286491.1\|1272193_1274782_-	glycosyltransferase	M1I277	Paramecium_bursaria_Chlorella_virus	2.9e-17	25.2
WP_018927027.1\|1275064_1275883_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	1.7e-08	31.9
WP_018927026.1\|1276003_1276408_-	SufE family protein	NA	NA	NA	NA
WP_026286490.1\|1276404_1277610_-	cysteine desulfurase	Q2XUY6	environmental_halophage	5.2e-70	36.1
WP_019581028.1\|1277704_1278739_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_081625766.1\|1278772_1279165_-	ArsC family reductase	NA	NA	NA	NA
WP_096479596.1\|1279425_1280625_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_019581026.1\|1280851_1283554_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA
WP_018927020.1\|1283599_1284382_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_018927019.1\|1284754_1285492_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_018927018.1\|1285682_1286546_+	elongation factor Ts	NA	NA	NA	NA
WP_003198235.1\|1286756_1287500_+	UMP kinase	NA	NA	NA	NA
WP_007940501.1\|1287496_1288054_+	ribosome recycling factor	NA	NA	NA	NA
WP_007940503.1\|1288068_1288824_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	1.4e-17	38.1
WP_028939206.1\|1288823_1289630_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_019581023.1\|1289626_1290817_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_028939207.1\|1290869_1292222_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_019581021.1\|1292294_1294673_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_007940508.1\|1294718_1295222_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_028939208.1\|1295225_1296281_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_007940511.1\|1296390_1296831_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_018927011.1\|1296827_1297604_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_019581019.1\|1297606_1298734_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_096479598.1\|1298733_1299375_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	5.0e-27	38.1
WP_028939209.1\|1299457_1302979_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	1.3e-198	36.4
WP_019581016.1\|1303129_1304077_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_096479599.1\|1304227_1305556_+\|tRNA	tRNA lysidine(34) synthetase TilS	A7IXR9	Paramecium_bursaria_Chlorella_virus	4.5e-06	25.8
WP_019581014.1\|1305830_1307462_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.9e-158	53.1
WP_015093773.1\|1307467_1308313_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	7.2e-50	42.8
WP_019581013.1\|1308470_1309760_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.4e-137	59.4
WP_007907178.1\|1309930_1310209_+	cell division protein FtsB	NA	NA	NA	NA
WP_019581012.1\|1310205_1310913_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_019581011.1\|1310949_1311846_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_018927002.1\|1311952_1313065_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	3.6e-33	28.8
WP_019581010.1\|1313073_1313919_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_019581009.1\|1313962_1314436_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_019581008.1\|1314432_1315491_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_018926998.1\|1315478_1316228_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-67	53.0
WP_172901226.1\|1316269_1316905_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.1e-41	52.3
WP_096479600.1\|1317116_1317974_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.4e-06	33.3
WP_007940534.1\|1318081_1319089_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
WP_007940535.1\|1319574_1319898_-	ferredoxin family protein	NA	NA	NA	NA
WP_028939211.1\|1320040_1322620_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	2.0e-26	22.5
WP_096479601.1\|1322819_1323554_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	5.5e-131	94.3
WP_019581003.1\|1324074_1324422_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	2.3e-50	86.0
WP_096479602.1\|1324550_1325135_+	hypothetical protein	B5TK65	Pseudomonas_phage	5.6e-86	79.9
WP_007907211.1\|1325131_1325314_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	1.4e-27	98.3
WP_019581001.1\|1325313_1326810_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	3.7e-267	94.0
WP_018926973.1\|1326877_1327225_+\|tail	phage tail tube protein	B5TK68	Pseudomonas_phage	3.5e-59	95.7
WP_018926972.1\|1327221_1327518_+\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	2.1e-41	89.8
WP_096479603.1\|1327648_1329673_+\|tail	phage tail protein	B5TK70	Pseudomonas_phage	1.1e-35	68.9
WP_096479604.1\|1329659_1330895_+	DNA circularization N-terminal domain-containing protein	B5TK71	Pseudomonas_phage	1.9e-176	76.2
WP_096479605.1\|1330898_1331942_+\|plate	baseplate protein	B5TK72	Pseudomonas_phage	3.2e-156	79.7
WP_096479606.1\|1331994_1332504_+\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	7.3e-82	92.3
WP_018926967.1\|1332503_1332902_+	phage GP46 family protein	B5TK74	Pseudomonas_phage	7.2e-69	95.5
WP_096479607.1\|1332891_1333935_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.1e-160	84.1
WP_019580996.1\|1333922_1334522_+	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	1.9e-105	91.5
WP_096479608.1\|1334533_1335685_+\|tail	phage tail protein	B5TK77	Pseudomonas_phage	6.8e-168	74.5
WP_096479609.1\|1335681_1336197_+\|tail	phage tail protein	B5TK78	Pseudomonas_phage	9.4e-53	69.3
WP_096479610.1\|1336331_1337411_+\|tail	phage tail protein	B5TK79	Pseudomonas_phage	1.5e-121	62.1
WP_019580992.1\|1337418_1337982_+\|tail	tail fiber assembly protein	B5TK80	Pseudomonas_phage	6.4e-79	72.5
WP_019580991.1\|1338019_1338940_+	hypothetical protein	B5TK77	Pseudomonas_phage	2.1e-23	80.3
WP_019580990.1\|1338939_1339416_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	2.2e-11	54.4
WP_019580989.1\|1339542_1340442_+	hypothetical protein	B5TK81	Pseudomonas_phage	4.0e-67	52.4
WP_019580988.1\|1340442_1340889_+	hypothetical protein	B5TK82	Pseudomonas_phage	2.5e-25	43.8
WP_096479611.1\|1340919_1341480_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	7.8e-85	83.2
WP_019580986.1\|1341461_1341980_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	6.1e-60	75.7
WP_019580985.1\|1342060_1342561_+	CinA family protein	B5TK85	Pseudomonas_phage	8.5e-75	87.3
WP_007940559.1\|1342644_1343697_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.2e-110	59.6
WP_007940560.1\|1343705_1344173_+	recombination regulator RecX	NA	NA	NA	NA
WP_019580984.1\|1344215_1345334_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_018926957.1\|1345824_1346019_+	hypothetical protein	NA	NA	NA	NA
WP_019580983.1\|1346019_1346445_-	hypothetical protein	NA	NA	NA	NA
WP_096479612.1\|1346634_1347393_+	DTW domain-containing protein	NA	NA	NA	NA
WP_018926954.1\|1347623_1348274_+	response regulator transcription factor	NA	NA	NA	NA
WP_019580981.1\|1348349_1348712_+	diacylglycerol kinase	NA	NA	NA	NA
WP_018926952.1\|1348708_1349635_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002554680.1\|1349757_1350537_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_018926951.1\|1350686_1351385_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_028939228.1\|1351570_1352341_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_018926949.1\|1352533_1353004_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.0e-37	51.3
WP_019580978.1\|1353079_1353790_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_019580977.1\|1353917_1354391_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_018926946.1\|1354516_1355854_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_019580976.1\|1356144_1358046_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	2.8e-78	34.8
WP_096479613.1\|1358107_1358434_-	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_096479614.1\|1358916_1360212_-	virulence factor family protein	NA	NA	NA	NA
WP_019580973.1\|1360211_1362854_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_019580972.1\|1363808_1364870_+	DNA polymerase IV	NA	NA	NA	NA
WP_019580971.1\|1364967_1365921_-	hypothetical protein	NA	NA	NA	NA
WP_019580970.1\|1365938_1367654_-\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	6.9e-07	25.4

DBSCAN-SWA_4

1904483 : 1965736

Pseudomonas_phage(15.0%)

integrase,holin,head,terminase,transposase,portal

attL 1894995:1895010|attR 1952649:1952664

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1894995:1895010	attL	NA	NA	NA	NA
WP_026331731.1\|1904483_1905677_+\|transposase	IS4 family transposase	A4KWT9	Enterobacteria_phage	1.3e-68	39.1
WP_155954669.1\|1908152_1908410_+	hypothetical protein	NA	NA	NA	NA
WP_096479752.1\|1909250_1909520_+	hypothetical protein	NA	NA	NA	NA
WP_028941044.1\|1909651_1909978_+	hypothetical protein	NA	NA	NA	NA
WP_028941045.1\|1910269_1910524_-	hypothetical protein	NA	NA	NA	NA
WP_019578451.1\|1910677_1911148_+	hypothetical protein	NA	NA	NA	NA
WP_026286336.1\|1911803_1912127_+	hypothetical protein	NA	NA	NA	NA
WP_019579683.1\|1912301_1914092_-	EAL and GGDEF domain-containing protein	NA	NA	NA	NA
WP_169342449.1\|1914226_1916308_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.2e-103	34.4
WP_026286337.1\|1916448_1917411_+	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_007936171.1\|1917524_1918178_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_019579687.1\|1918212_1919202_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.2e-33	34.6
WP_018925174.1\|1919198_1919999_-	ABC transporter permease	NA	NA	NA	NA
WP_167331172.1\|1919985_1920822_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_096479753.1\|1920827_1921634_-	alkaline phosphatase family protein	NA	NA	NA	NA
WP_018925177.1\|1921863_1922931_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_007940851.1\|1923282_1923996_+	UTRA domain-containing protein	NA	NA	NA	NA
WP_026331735.1\|1924031_1926185_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_019579691.1\|1926262_1926439_-	hypothetical protein	NA	NA	NA	NA
WP_019579692.1\|1926690_1927980_-	M18 family aminopeptidase	NA	NA	NA	NA
WP_096479754.1\|1928239_1928875_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	7.4e-07	30.1
WP_007940845.1\|1928966_1929221_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_007940844.1\|1929220_1930033_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_026331736.1\|1930234_1930972_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_019579693.1\|1931090_1932023_+	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	8.2e-47	36.3
WP_019579694.1\|1932058_1933231_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_096479755.1\|1933282_1934068_-	hypothetical protein	NA	NA	NA	NA
WP_019579696.1\|1934550_1935909_-	purine permease	Q9KX94	Enterobacteria_phage	6.6e-29	29.1
WP_019579697.1\|1936139_1937441_-	urate hydroxylase PuuD	NA	NA	NA	NA
WP_018925187.1\|1937492_1937996_-	ureidoglycolate lyase	NA	NA	NA	NA
WP_007940834.1\|1938111_1939107_-	allantoicase	NA	NA	NA	NA
WP_096479756.1\|1939194_1939710_-	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA
WP_007940832.1\|1939706_1940633_-	allantoinase PuuE	NA	NA	NA	NA
WP_007940831.1\|1941068_1941422_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_096479757.1\|1941611_1942238_-	LysE family translocator	NA	NA	NA	NA
WP_019648216.1\|1942310_1943660_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.8e-64	34.9
WP_019648217.1\|1944021_1944477_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_019579702.1\|1944559_1945726_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_019579703.1\|1945826_1946198_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_096479758.1\|1946298_1946859_-	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	1.5e-59	65.0
WP_096479759.1\|1947654_1948164_-	hypothetical protein	NA	NA	NA	NA
WP_096479760.1\|1948739_1949948_-\|integrase	tyrosine-type recombinase/integrase	J7HXC4	Pseudomonas_phage	1.7e-129	58.9
WP_096479761.1\|1950492_1950810_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_096479762.1\|1950968_1951253_-	DNA-binding protein	NA	NA	NA	NA
WP_096479763.1\|1951263_1951854_-	hypothetical protein	NA	NA	NA	NA
WP_096479764.1\|1952106_1952826_-	helix-turn-helix transcriptional regulator	A0A1W6JNY2	Morganella_phage	8.6e-36	39.6
1952649:1952664	attR	NA	NA	NA	NA
WP_028939687.1\|1952928_1953153_+	helix-turn-helix transcriptional regulator	A0A127KNT2	Pseudomonas_phage	7.8e-12	47.9
WP_096479765.1\|1953479_1953998_+	hypothetical protein	NA	NA	NA	NA
WP_032831000.1\|1953990_1954221_+	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_096479766.1\|1954210_1956427_+	conjugal transfer protein TraC	A0A2D1GN57	Marinobacter_phage	1.3e-188	46.3
WP_096479767.1\|1956419_1956782_+	hypothetical protein	NA	NA	NA	NA
WP_096479768.1\|1957308_1957656_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	7.0e-44	80.9
WP_096479769.1\|1957667_1958384_+	hypothetical protein	A0A291AUT0	Sinorhizobium_phage	3.0e-25	34.8
WP_052963661.1\|1958574_1959072_+	hypothetical protein	NA	NA	NA	NA
WP_096481606.1\|1959109_1961110_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	1.7e-145	46.4
WP_096479770.1\|1961112_1961334_+	hypothetical protein	A0A291AUT6	Sinorhizobium_phage	1.1e-10	52.2
WP_096479771.1\|1961330_1962941_+\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	2.5e-107	43.0
WP_096479772.1\|1962943_1964296_+	S49 family peptidase	A0A2H4EXF7	Aeromonas_phage	1.4e-50	43.3
WP_096479773.1\|1964338_1964752_+	cytoplasmic protein	G8DH46	Emiliania_huxleyi_virus	2.5e-24	47.1
WP_096479774.1\|1964791_1965736_+\|head	Mu-like prophage major head subunit gpT family protein	G8DH47	Emiliania_huxleyi_virus	3.1e-86	51.4

DBSCAN-SWA_5

2444803 : 2451096

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_018925530.1\|2444803_2446084_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.4e-97	53.3
WP_018925531.1\|2446084_2447479_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_096479917.1\|2447618_2448626_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_096479918.1\|2448716_2449718_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	7.2e-166	85.7
WP_018925534.1\|2449714_2450050_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	2.1e-45	80.2
WP_096479919.1\|2450046_2450340_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	4.7e-33	70.7
WP_028941281.1\|2450339_2450702_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	3.8e-40	67.5
WP_096481612.1\|2450703_2451096_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	3.8e-54	79.8

DBSCAN-SWA_6

4786983 : 4796184

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096480868.1\|4786983_4788201_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-13	26.7
WP_096480869.1\|4788197_4788992_-	ABC transporter permease	NA	NA	NA	NA
WP_172901240.1\|4789139_4790486_-	phosphomannomutase	A0A1X9I671	Streptococcus_phage	8.9e-10	23.0
WP_096480871.1\|4790627_4792070_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	8.5e-59	30.6
WP_096480872.1\|4792521_4793430_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.3e-109	67.8
WP_096480873.1\|4793426_4794320_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.5e-26	32.7
WP_096480874.1\|4794316_4795393_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.3e-98	53.6
WP_096480875.1\|4795620_4795860_-	LapA family protein	NA	NA	NA	NA
WP_003369729.1\|4795887_4796184_-	integration host factor subunit beta	A3E2K9	Sodalis_phage	1.5e-10	41.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage