CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP017469	Hafnia sp. CBA7124	8 crisprs	WYL,DEDDh,cas3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,csa3	0	29	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP017469_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_1

428075-428277

Orphan

Consensus_repeat	Method
CCGAACTCGGTATGCTCCTCCCCTTGTGAAGGGGGAGGCTGGGAGGGGG	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_AP017469_1

>merge|NZ_AP017469|1|428075-428277|CRISPRCasFinder
CCGAACTCGGTATGCTCCTCCCCTTGTGAAGGGGGAGGCCGGAAGGGTGTGAATTCCCTGCCGTTCAGTGACGCAAGCCGAACTCGGTATGCTCCTCCCCTTGTGAAGGGGGAGGCTGGGAGGGGGCGAATTCCCTGCCGTTAAGTGACATAAACCGAACTCGGTATGCTCCTCCCCCTGTGAAGGGGGAGGCTGGGAGGGGG

>NZ_AP017469|1|1|428075-428277|CRISPRCasFinder
CCGAACTCGGTATGCTCCTCCCCTTGTGAAGGGGGAGGCCGGAAGGGTG	TGAATTCCCTGCCGTTCAGTGACGCAAGCCGAACTCGGTATGCTCCTCCCCTTGTGAAGGGGGAGGCTGGGAGGGGGCGAATTCCCTGCCGTTAAGTGACATAAA
CCGAACTCGGTATGCTCCTCCCCCTGTGAAGGGGGAGGCTGGGAGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_096386143.1\|425262_426018_-\|L-fucose-operon-activator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|236684
NZ_AP017469.1\|WP_096386141.1\|421593_422088_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017469.1\|WP_025798632.1\|438136_438607_-\|membrane-protein	unknown	unknown	gnl\|CDD\|371239
NZ_AP017469.1\|WP_025798627.1\|436433_436733_-\|cupin	unknown	unknown	gnl\|CDD\|380366
NZ_AP017469.1\|WP_043490559.1\|437089_438007_+\|bestrophin	unknown	unknown	gnl\|CDD\|226304
NZ_AP017469.1\|WP_096386148.1\|428289_430080_-\|L-fucose-isomerase	unknown	unknown	gnl\|CDD\|182885
NZ_AP017469.1\|WP_025798602.1\|422295_423222_+\|glutaminase-B	unknown	unknown	gnl\|CDD\|234880
NZ_AP017469.1\|WP_046450367.1\|426097_426523_-\|L-fucose-mutarotase	unknown	unknown	gnl\|CDD\|185318
NZ_AP017469.1\|WP_043490540.1\|424007_425084_-\|glucans-biosynthesis-protein-MdoC	unknown	unknown	gnl\|CDD\|235167
NZ_AP017469.1\|WP_096386151.1\|432794_433943_+\|lactaldehyde-reductase	unknown	unknown	gnl\|CDD\|182595
NZ_AP017469.1\|WP_025798622.1\|434213_434786_-\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308
NZ_AP017469.1\|WP_096386146.1\|426524_427988_-\|L-fuculokinase	unknown	unknown	gnl\|CDD\|182383
NZ_AP017469.1\|WP_025798618.1\|432110_432758_+\|L-fuculose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|181226
NZ_AP017469.1\|WP_096386154.1\|434990_436217_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273323
NZ_AP017469.1\|WP_025798597.1\|420418_421135_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_AP017469.1\|WP_025798615.1\|430132_431452_-\|L-fucose:H+-symporter-permease	unknown	unknown	gnl\|CDD\|182260
NZ_AP017469.1\|WP_043490538.1\|423236_423965_+\|DUF2884-domain-containing-protein	unknown	unknown	gnl\|CDD\|182597
NZ_AP017469.1\|WP_025798599.1\|421134_421461_+\|YggL-family-protein	unknown	unknown	gnl\|CDD\|183281
NZ_AP017469.1\|WP_172863830.1\|419013_420072_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|182805
NZ_AP017469.1\|WP_072053386.1\|438676_438829_-\|DUF2474-domain-containing-protein	unknown	unknown	gnl\|CDD\|371167

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_096386143.1\|425262_426018_-\|L-fucose-operon-activator	gnl\|CDD\|236684	PRK10411, PRK10411, L-fucose operon activator.	3.72418e-144
NZ_AP017469.1\|WP_025798615.1\|430132_431452_-\|L-fucose:H+-symporter-permease	gnl\|CDD\|182260	PRK10133, PRK10133, L-fucose:H+ symporter permease.	0
NZ_AP017469.1\|WP_025798632.1\|438136_438607_-\|membrane-protein	gnl\|CDD\|371239	pfam10777, YlaC, Inner membrane protein YlaC. Members of this family include proteins annotated as inner membrane protein YlaC in E. coli and Salmonella. The function of this family is unknown.	2.56469e-75
NZ_AP017469.1\|WP_025798627.1\|436433_436733_-\|cupin	gnl\|CDD\|380366	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain. This family includes bacterial and archaeal pectin degradation protein KdgF that catalyzes the linearization of unsaturated uronates from both pectin and alginate, which are polysaccharides found in the cell walls of plants and brown algae, respectively, and represent an important source of carbon. These polysaccharides, mostly consisting of chains of uronates, can be metabolized by bacteria through a pathway of enzymatic steps to the key metabolite 2-keto-3-deoxygluconate (KDG). Pectin degradation is used by many plant-pathogenic bacteria during infection, and also, pectin and alginate can both represent abundant sources of carbohydrate for the production of biofuels. These proteins belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	2.05113e-12
NZ_AP017469.1\|WP_043490559.1\|437089_438007_+\|bestrophin	gnl\|CDD\|226304	COG3781, COG3781, Predicted membrane protein [Function unknown].	2.74707e-130
NZ_AP017469.1\|WP_096386148.1\|428289_430080_-\|L-fucose-isomerase	gnl\|CDD\|182885	PRK10991, fucI, L-fucose isomerase; Provisional.	0
NZ_AP017469.1\|WP_025798602.1\|422295_423222_+\|glutaminase-B	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	0
NZ_AP017469.1\|WP_046450367.1\|426097_426523_-\|L-fucose-mutarotase	gnl\|CDD\|185318	PRK15420, fucU, L-fucose mutarotase; Provisional.	1.37463e-86
NZ_AP017469.1\|WP_043490540.1\|424007_425084_-\|glucans-biosynthesis-protein-MdoC	gnl\|CDD\|235167	PRK03854, opgC, glucans biosynthesis protein MdoC.	7.64707e-109
NZ_AP017469.1\|WP_096386151.1\|432794_433943_+\|lactaldehyde-reductase	gnl\|CDD\|182595	PRK10624, PRK10624, L-1,2-propanediol oxidoreductase; Provisional.	0
NZ_AP017469.1\|WP_025798622.1\|434213_434786_-\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.51853e-71
NZ_AP017469.1\|WP_096386146.1\|426524_427988_-\|L-fuculokinase	gnl\|CDD\|182383	PRK10331, PRK10331, L-fuculokinase; Provisional.	0
NZ_AP017469.1\|WP_025798618.1\|432110_432758_+\|L-fuculose-phosphate-aldolase	gnl\|CDD\|181226	PRK08087, PRK08087, L-fuculose-phosphate aldolase.	6.41538e-157
NZ_AP017469.1\|WP_096386154.1\|434990_436217_-\|MFS-transporter	gnl\|CDD\|273323	TIGR00890, Uncharacterized_MFS-type_transporter_YhjX, oxalate/formate antiporter family transporter. This subfamily belongs to the major facilitator family. Members include the oxalate/formate antiporter of Oxalobacter formigenes, where one substrate is decarboxylated in the cytosol into the other to consume a proton and drive an ion gradient. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.29204e-112
NZ_AP017469.1\|WP_025798597.1\|420418_421135_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	3.0539e-113
NZ_AP017469.1\|WP_043490538.1\|423236_423965_+\|DUF2884-domain-containing-protein	gnl\|CDD\|182597	PRK10626, PRK10626, hypothetical protein; Provisional.	3.82094e-125
NZ_AP017469.1\|WP_025798599.1\|421134_421461_+\|YggL-family-protein	gnl\|CDD\|183281	PRK11702, PRK11702, hypothetical protein; Provisional.	4.25449e-73
NZ_AP017469.1\|WP_172863830.1\|419013_420072_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	0
NZ_AP017469.1\|WP_072053386.1\|438676_438829_-\|DUF2474-domain-containing-protein	gnl\|CDD\|371167	pfam10617, DUF2474, Protein of unknown function (DUF2474). This family of short proteins has no known function.	1.01143e-10

>NZ_AP017469.1|WP_096386146.1|426524_427988_-|L-fuculokinase
MNHDVVIILDCGATNIRAIAIDAKGIVVAKASTANASQPAAENDQWHIWSLDDILQRFADCCQQLMPQLNGYHIHALSVTTFGVDGALVDKNGELLYPVISWKCPRTAAIMEKIDRYITPGELQTISGIGQFSFNTLYKLIWLKENRPELLEQAHSWLFISSLINHRLTGEFTTDRTMAGTSQLLDVRQETFSQTILQRTGLPSSLFPRMVAAGEHVGNLLPKMAARLGIPVGTPVISAGHDTQFALFGSGAELDQPVLSSGTWEILMVRTPQVNTSLLPRFAGSTCELDSCQGLFNPGLQWLASGVLERVRQLYWPNEKIPDAYAQMITEADAIRPGAEGLRMNCQLLDNHAQAGWRGMRLHTERGHFYRSALEGLSWQLQQNLAVLENIGGFASKELLLVGGGSRNMLWNQIKADVLNLPVKVLHDAETTVLGAAMFAWSGVGYYDSPEQARQQVNYRYQSYYPGEQSEIYQSLAHENNLLKEGV
>NZ_AP017469.1|WP_046450367.1|426097_426523_-|L-fucose-mutarotase
MLKNISALISPQLLKTLAEMGHGDEIIFSDAHFPAHSMGPKVIRADGLRVSDLLAAIIPLFELDSYAPPLVMMAAVEGDTLDASVEQRYLQALSSPDRRDLSVTRIDRFAFYERAQKAFAIVITGETAKYGNILLKKGVTP
>NZ_AP017469.1|WP_096386143.1|425262_426018_-|L-fucose-operon-activator
MKTDRHQAIVQLIRQHETLTTEDLAELLHVSKETIRRDLNTLQAQGKIIRQHGRAKSIKRDTQDNGDPFSARLKSHFTSKADIARQTLPWIDAGMTIALDASSTCWYLAKQLPDIDITVFTNSVRICQELSKREHIQLISSGGLLQRKYACYVNPAILSQLKELEIDLFIFSCEGIDREGILWDSNSYNAEFKSLLLKRALQSLLLIDKSKMNRTSEIKIGGISDVVQVITNLEMPETDALSEAEDEGTSR
>NZ_AP017469.1|WP_043490540.1|424007_425084_-|glucans-biosynthesis-protein-MdoC
MLLGIPFHVSLVYSAHHWVVNSTPESLTLSLFNDFIHAFRMQVFFVISGYFSCMLYQRYPLKKWLNVRLTRLLIPMATAMVLITLPQFWYILHHTSGIGDWDQANVWQKANICVWYLVSHLWFLLTLSLLTVISAPLLNAIVNRGLWSKVPTHMLLPIFIALGVVFAVLHKLCATFMPEITGSALFNFLVVNTLMYFPFYLLGAVAFVHIKHKENITRVSFSDGLIAAASVGLYLLNENTQVFAPLQLSVQFCLIFIIGLTMTKVVLTLGHRLLNRESRGVTYFVGASLFIYLVHHPLTIIYGSLMETAHPNPFIGFIIGVTLVVLGSLALYEIHRRVPLLRYLFSGKPQKPVVNSLK
>NZ_AP017469.1|WP_043490538.1|423236_423965_+|DUF2884-domain-containing-protein
MIRKLGLSLLMLTAWQAQAAWECNVKPQDDIIINPQQVQIVGASGNLTIDKNGNMTRDGKAVALSAKAQQQAVNLQSGIRTDFPWIDQGAQQRLEKARVSLDKVIVEQVGSDSNIRNRLTKLDSQLKEQMQKILEKRSDGYTFHHQAISKVEQEGQNLVNQTMGGVLQDSINEMGLKQAANATKSDNPLQAIMGNLGGLQQAIRTEWSKQDDDFKAFGKDVCTRITTLDNQRQALIKELPKA
>NZ_AP017469.1|WP_025798602.1|422295_423222_+|glutaminase-B
MATKLSNQLLEDILAQVRPLIGQGKVADYIPALAEVPANKLGIAVCTVDGETYQAGDADERFSIQSISKVLSLTVALSRYAESDIWARVGKEPSGQPFNSLLQLELEQGKPRNPFINAGALVVCDMLQSRLSAPKQRMLEVVRALSGEPDIVYDARVARSEFEHSDRNAAIAYLMKSFGNFENDVITVLQTYFHYCALRMSCMELARTFVYLANNGHSPALDEPLINERQNRQINAMMVTSGMYDGAGEFAYRVGMPGKSGVGGGIIAVVPHEMSIAVWCPELDASGNSLAGTAALEILAQRIGRSIF
>NZ_AP017469.1|WP_096386141.1|421593_422088_-|hypothetical-protein
MEFLALKQGDFTLHLCHFSIHNQPFTCLFSLVDLDDDSYLIFRSEEVGFLLQEPSYDVKFDRQDNFESGHFYASPVSQITRFGYRELLMLGEILTQIIEQHYQTFNAKSYFANAENLRLKHFYDRLVSRSENRLNFELSNNIGPGELGYAFKTPCFRTQKNDGA
>NZ_AP017469.1|WP_025798599.1|421134_421461_+|YggL-family-protein
MAKNRSRRLRKKMHIDEFQELGFSVSWNFEEGTGIDIIDTTVDKFIDEAIEPNGLAFDGSGYLAWEGLICLQQIGQCTEEHQKLVKDWLEAHGMKNVVVSDLFDVWWD
>NZ_AP017469.1|WP_025798597.1|420418_421135_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MNDVVSPEFDENGRVMRRIRSFVRRQGRLTKGQQFALDNFWPVMGVDFQPQPLDLVALFGREAPTVLEIGFGMGASLVTMAQQHPEKNFLGIEVHSPGVGACLAAAHEAGITNLRVMCHDAIEVLEEMIPESSLAMVQLFFPDPWHKARHHKRRIVQAPFAQQIKSKLKIGGVFHMATDWENYAEHMLEVMNNAPGYKNLSSDNTYVPRPDSRPLTKFELRGQRLGHGNWDLMFERVE
>NZ_AP017469.1|WP_172863830.1|419013_420072_-|A/G-specific-adenine-glycosylase
MMLAQQFAQSVLTWYDRYGRKTLPWQSPKTPYQVWLSEVMLQQTQVATVIPYFLRFMEKFPDVRALAAAPQDEVLHLWTGLGYYARGRNLHKAAQTIVEKHGGEFPTSFEEVCALPGVGRSTAGAILSLSLGQHYPILDGNVKRVLARCYAVDGWPGKKEVENRLWQISEEVTPAKGVSQFNQAMMDLGAIVCTRSKPKCELCPLSSGCMAYANNSWSQYPGKKPKQTIPERTGYFLMMQIGDKVWLEQRPNVGLWGGLYCFPQFASEDELRLHVESLGIGQPKLHQLTSFRHTFSHFHLDIVPIWFDITQHSHCMDEGTGLWYNLAQPPSVGLAAPVERLLQQLVKEPVAK
>NZ_AP017469.1|WP_096386148.1|428289_430080_-|L-fucose-isomerase
MNSQHQTLQNLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAQLLSEQLHHACGAAVECVIADGCIAGMAESAACEDKFSRQNVGLTITVTPCWCYGSETIDMDPMRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDGGDDSIPADVEEKLLRFARAGLAVASMKGKSYMSLGGVSMGIAGSIVDHNFFESWLGMKVQSVDMTELRRRIDQKIYDAEELELALSWADNNFRFGPDLNAEQYRRSPESSRAVLRESLLMAMCIRDMMQGNEKLAQQGFVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEALLNSSFDWNGVRKPFVVATENDSLNGVAMLFGHMLTGTAQVFADVRTYWSPEAVKRVTGSDLTGHAKDGIIHLINSGSAALDGSCRQLDAQGNPTMKPHWQISQKEADACLQATEWCPAIHEYFRGGGYSSRFLTRGGVPFTMSRVNIIKGIGPVLQIAEGWSVELPKDVHDTLDKRTNETWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADLITLASMLRIPVCMHNVEDGEIYRPSSWAAHGMDTEGQDYRACQNYGPLYKK
>NZ_AP017469.1|WP_025798615.1|430132_431452_-|L-fucose:H+-symporter-permease
MGNVSIQSENYRVASHERKGNYLIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFLIPIPAGILMKKLSYKAGIITGLLFYAIGAALFWPAAEGMNYTLFLIGLFIIAAGLGCLETAANPFVTVLGPEESGHFRINLAQTFNSFGAIIAVVFGQGLILSHVPHQPAEVLSQMAPEQLAAYNHSLVLAVQSPYMMIVAIVLFVALLIAFTKFPTIQSDAHSGDKGGSLLASVSRLLRIRHWRWAVLAQFCYVGAQTACWSYLIRYAIEELPGTTPGFAANYLTATMVCFFIGRFSGTWLIRHYAPHKVLAIYAFISMLLCIISAAAGGHVGLIALTLCSMFMSIQYPTIFSLGIKGLDQDTKYGSSIIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAIIFIFAKFRSNIMPRATA
>NZ_AP017469.1|WP_025798618.1|432110_432758_+|L-fuculose-phosphate-aldolase
MERDSLAREIIHTCLEMTRLGLNQGTAGNVSVRYRDGMLITPTGIPYENLTESHIVYIDQHGKHEEGKVPSSEWRFHQIAYQTRPEANAVVHNHAVNCTAVSILNRPIPAIHYMIAAAGGSTIPCAPYATFGTKQLSEHVAVALKNRKATLLQHHGMIACEANLQKALWLAHEVEVLAELYLATLPIVDPVPVLSDEEIAIVLEKFKTYGLRVEE
>NZ_AP017469.1|WP_096386151.1|432794_433943_+|lactaldehyde-reductase
MTNRMILNETSFFGRGAVNELVPEVLRRGYGKALIVTDAQLVACGVVEKVTAKLDAAGLEYQIFDRVVPNPTIAVVQRGLATFNESGADYLIAIGGGSPQDTCKAIGIISANPEFEDVRSLEGVAPTHSPSVPILAIPTTAGTAAEVTINYVITDEENRRKFVCVDPHDIPLVAFIDADMMDGMPASLKAATGVDALTHAIEGFITRGAWELTDTLHLKAIEIIARSLRSSVAGLPEAVEDMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNAAYTGEKYRQIARAMGADVAHATLEQAREAAIQAVEALNRDVGIPASLKEVGVREEDIAELAQAAFDDVCTGGNPRQAKIAEIEALYLAAM
>NZ_AP017469.1|WP_025798622.1|434213_434786_-|HdeD-family-acid-resistance-protein
MLNIDRKSLLGLDGNFLKKQRTLLLVISFLLLLGGIFCLINPFASGAALSAIVGTLFMLSGIGLIIGMIANRTRNFWPMVAGILMGVAYIIMGYVFITNPMVGIFTMSVILATLFALGGIIRLSAGYKLRGVSGGWLQIIIGILDLAIAAMFITAGPAMSVTLVTTIVGIEMLFSSFSCFQIAGMFKREA
>NZ_AP017469.1|WP_096386154.1|434990_436217_-|MFS-transporter
MNMTGMQNYNRTRWLTLVGTIITQFALGSVYTWSLFNGPLSEKLDEPISRVAFSFGLLSLALAVASSVAGKLQDRFGVRNVTIAAGVVLALGFFLTAHSNNLIMLYLSAGILVGLADGAGYLMTLSNCVKWFPERKGMISACAIGAYGLGSLGFKYIDTSLLATYGLENTFMIWGGLAMVMVMAGAMLMKDAPKQEVAASNAQGESTAQDYTLAEAVRQPQYWMLALMFLTACMSGLYVIGVAKDIGEGMVHLPAMTAASAVTVIAIANLSGRLVLGILSDKMARIRVISLAQVISLIGMGTLLFVPLNEGLFFASVACIAFSFGGTITVYPSLVSDFFGLNNLTKNYGLLYLGFGIGSIIGSIIASMFGGFIVTFSVIMTLLVISLVLSATIRMPGHREEHNQLAHV
>NZ_AP017469.1|WP_025798627.1|436433_436733_-|cupin
METFKAQTPAEEYGVGITRRSGVISNGKPAAELTFESGAFSQLRKQMQGNTTRVVSGEFEFTVGAETHLLIAGESVNIPVNIISGCFCLSTGVLVETPL
>NZ_AP017469.1|WP_043490559.1|437089_438007_+|bestrophin
MIVRPQQHWFRRLFVWHGSVLPKILFRLSLNFGFACIAVVCYLWHEMLDVNLTLAPFSLLGVAIAIFLGFRNNASYARFTEARLLWGNLLITERSLLREVKSLMPDPAEQARYFTSLLIAFTYCLKHQLRKTDMRIDVDRLLAPSERNSVLNSHSPCNTLLLKMGMWLGEQRRLGRISDISFHSIDSNLNHLSSILGGCERISNTPIPFAYSLIVHRTVYLFCALLPFALVSDLHYLTPLVSVFISYTFISLDSLAEELEDPFGMAPNDLPLNAISATIEINLREMIEDDEKPIPMKPDHHCLLS
>NZ_AP017469.1|WP_025798632.1|438136_438607_-|membrane-protein
MSEIERILKEEIDRVNKAEHRDNRPRFSISFIKKHPGLFVGMYLAYAATLAVMLQSETLADVTWVMTLLFVGLNLFFFFDVNPRYHYDDIDVLDLRVCFNGEWYNTRMVPDALVDSILQSSQVDESRKQKLRAIMQRKSELSFYDIFAVGQNRSPV
>NZ_AP017469.1|WP_072053386.1|438676_438829_-|DUF2474-domain-containing-protein
MTTIEAQTPRSPLWKRMLWLAAIWAGSVLALGCVSMLFRLLMTAAGLKSH

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Crispr_ID: NZ_AP017469_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_2

1065834-1066101

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAAT	CRT

4 spacers

The CRISPR arrays of NZ_AP017469_2

>merge|NZ_AP017469|2|1065834-1066101|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGTACAGGCAGCTTAGAAATTTGGTCGGTGCGCCAATCTTCCAGAAGTTAAGTTCACTGCCGTACAGGCAGCTTAGAAATGATTCAGGTAGGAATCTTATTGTTAAAGAGCGTTCACTGCCGTACAGGCAGCTTAGAAACATGCTAGGCCAAGGATTTCGCCTTGTCTCATGTTCACTGCCGTACAGGCAGCTTAGAAATTTAAACAACGGCTCTATCCCGGATGGACGAAGCTCACTGCTGTACAGGTAGATAATTCC

>NZ_AP017469|2|1|1065834-1066041|PILER-CR
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTGGTCGGTGCGCCAATCTTCCAGAAGTTAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATTCAGGTAGGAATCTTATTGTTAAAGAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	CATGCTAGGCCAAGGATTTCGCCTTGTCTCAT
GTTCACTGCCGTACAGGCAGCTTAGAAA

>NZ_AP017469|2|2|1065834-1066101|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTGGTCGGTGCGCCAATCTTCCAGAAGTTAA
GTTCACTGCCGTACAGGCAGCTTAGAAA	TGATTCAGGTAGGAATCTTATTGTTAAAGAGC
GTTCACTGCCGTACAGGCAGCTTAGAAA	CATGCTAGGCCAAGGATTTCGCCTTGTCTCAT
GTTCACTGCCGTACAGGCAGCTTAGAAA	TTTAAACAACGGCTCTATCCCGGATGGACGAA
GCTCACTGCTGTACAGGTAGATAATTCC

>NZ_AP017469|2|1|1065834-1066042|CRT
GTTCACTGCCGTACAGGCAGCTTAGAAAT	TTGGTCGGTGCGCCAATCTTCCAGAAGTTAA
GTTCACTGCCGTACAGGCAGCTTAGAAAT	GATTCAGGTAGGAATCTTATTGTTAAAGAGC
GTTCACTGCCGTACAGGCAGCTTAGAAAC	ATGCTAGGCCAAGGATTTCGCCTTGTCTCAT
GTTCACTGCCGTACAGGCAGCTTAGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_096386575.1\|1058759_1059818_-\|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK	unknown	unknown	gnl\|CDD\|131215
NZ_AP017469.1\|WP_096388716.1\|1071374_1072829_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_AP017469.1\|WP_096386592.1\|1067793_1069464_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_AP017469.1\|WP_025800558.1\|1073110_1074748_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_AP017469.1\|WP_096386572.1\|1057976_1058750_-\|2,3-dehydroadipyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|182026
NZ_AP017469.1\|WP_096386583.1\|1062718_1064791_+\|phenylacetic-acid-degradation-bifunctional-protein-PaaZ	unknown	unknown	gnl\|CDD\|236931
NZ_AP017469.1\|WP_096386570.1\|1055624_1057169_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236211
NZ_AP017469.1\|WP_096386580.1\|1061454_1062462_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-A	unknown	unknown	gnl\|CDD\|184320
NZ_AP017469.1\|WP_025800553.1\|1060370_1061144_-\|phenylacetate-CoA-oxygenase-subunit-PaaC	unknown	unknown	gnl\|CDD\|368300
NZ_AP017469.1\|WP_096388715.1\|1069563_1071213_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238625
NZ_AP017469.1\|WP_096386586.1\|1064862_1065657_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_AP017469.1\|WP_025800562.1\|1077697_1078462_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_AP017469.1\|WP_040044484.1\|1076833_1077601_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
NZ_AP017469.1\|WP_025800549.1\|1057171_1057972_-\|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase	unknown	unknown	gnl\|CDD\|236163
NZ_AP017469.1\|WP_025800559.1\|1074831_1076136_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_AP017469.1\|WP_046449534.1\|1078448_1079171_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_AP017469.1\|WP_043491508.1\|1061152_1061440_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	unknown	unknown	gnl\|CDD\|237504
NZ_AP017469.1\|WP_096386577.1\|1059833_1060343_-\|phenylacetate-CoA-oxygenase-subunit-PaaJ	unknown	unknown	gnl\|CDD\|131214
NZ_AP017469.1\|WP_096386589.1\|1066109_1067708_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_AP017469.1\|WP_025800560.1\|1076250_1076478_-\|DUF465-domain-containing-protein	unknown	unknown	gnl\|CDD\|183127

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_096386575.1\|1058759_1059818_-\|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK	gnl\|CDD\|131215	TIGR02160, 12-phenylacetyl-CoA_epoxidase_subunit_E, phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	1.87242e-172
NZ_AP017469.1\|WP_096388716.1\|1071374_1072829_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.98525e-136
NZ_AP017469.1\|WP_096386592.1\|1067793_1069464_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.28792e-27
NZ_AP017469.1\|WP_025800558.1\|1073110_1074748_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_AP017469.1\|WP_096386572.1\|1057976_1058750_-\|2,3-dehydroadipyl-CoA-hydratase	gnl\|CDD\|182026	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional.	6.57021e-139
NZ_AP017469.1\|WP_096386583.1\|1062718_1064791_+\|phenylacetic-acid-degradation-bifunctional-protein-PaaZ	gnl\|CDD\|236931	PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional.	0
NZ_AP017469.1\|WP_096386570.1\|1055624_1057169_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236211	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated.	0
NZ_AP017469.1\|WP_096386580.1\|1061454_1062462_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-A	gnl\|CDD\|184320	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional.	0
NZ_AP017469.1\|WP_025800553.1\|1060370_1061144_-\|phenylacetate-CoA-oxygenase-subunit-PaaC	gnl\|CDD\|368300	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein. This family includes proteins such as PaaA and PaaC that are part of a catabolic pathway of phenylacetic acid. These proteins may form part of a dioxygenase complex.	1.75265e-115
NZ_AP017469.1\|WP_096388715.1\|1069563_1071213_-\|amidohydrolase	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	8.18264e-136
NZ_AP017469.1\|WP_096386586.1\|1064862_1065657_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.41443e-158
NZ_AP017469.1\|WP_025800562.1\|1077697_1078462_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.50268e-77
NZ_AP017469.1\|WP_040044484.1\|1076833_1077601_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.44748e-96
NZ_AP017469.1\|WP_025800549.1\|1057171_1057972_-\|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase	gnl\|CDD\|236163	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.	2.00925e-166
NZ_AP017469.1\|WP_025800559.1\|1074831_1076136_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_AP017469.1\|WP_046449534.1\|1078448_1079171_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.28451e-154
NZ_AP017469.1\|WP_043491508.1\|1061152_1061440_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	gnl\|CDD\|237504	PRK13781, paaB, phenylacetate-CoA oxygenase subunit PaaB; Provisional.	1.15235e-65
NZ_AP017469.1\|WP_096386577.1\|1059833_1060343_-\|phenylacetate-CoA-oxygenase-subunit-PaaJ	gnl\|CDD\|131214	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	6.40155e-63
NZ_AP017469.1\|WP_096386589.1\|1066109_1067708_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.68877e-31
NZ_AP017469.1\|WP_025800560.1\|1076250_1076478_-\|DUF465-domain-containing-protein	gnl\|CDD\|183127	PRK11415, PRK11415, hypothetical protein; Provisional.	7.80615e-22

>NZ_AP017469.1|WP_096386586.1|1064862_1065657_+|nucleoside-triphosphate-pyrophosphohydrolase
MTSSPMQRLLTIMQTLRDPERGCPWDQKQTFATIAPYTLEETYEVLDAIQREDFSDLREELGDLLFQVVFYAQMGQEQGLFNFDDVCNAISDKLERRHPHVFAAEHTESAEASLARWEQRKAQERAEKDLSSSMDDIPNALPALMKAYKIQKRCAAVGFDWDTLGPVLGKVYEEIDEVMDEAQQAVVDEEKLGEEIGDLLFATVNLSRHLGHKAENALQAANRKFERRFRAVEDAVRASGKTMEEATLDEMEAHWQQVKKAEGK
>NZ_AP017469.1|WP_096386583.1|1062718_1064791_+|phenylacetic-acid-degradation-bifunctional-protein-PaaZ
MQQLTSYISGVWAYGQGKERAIHHAVSGEALYQVCSDGLPLAESLDYARQHGGKALAAMTFQQRAQMMKAVAKHLLAHKESLYQISAETGATRGDGWVDIEGGIATLFAYAGLAGRELPDDTLWPEDELIPLSKQSQFAARHVITSRPGVALHINAFNFPCWGMLEKLAPTWLAGMPAIIKPATASAQLTQAMVKLIIESGLVPEGALQLICGGVGDIFEHLDYQDAVTCTGSAQTGQKLRSHPRLLQKSIAFTMEADSLNCCILGEDVTPEMPEFAIFIKEVVREMTTKAGQKCTAIRRVIVPAAQMDAVQQALLKRLGGVTVGDPAHPDVRMGALVNLEQRDDVQQKVDYLLRNGCEPLCGGSLSALQLIGSGAENGAFYPPTLLYCADPFTHQAVHGTEAFGPVATLMPYQNAEQAVELALLGQGSLAGSLVTADEQTAAKIIRATACAHGRMLILDRHAAAESTGHGSPLPMLVHGGPGRAGGGEELGGLRAVKHYMQRTAIQGSPTMLAAIGREWVRGADVVEEQVHPFRKYFEQLAIGESLLTARRTITEADIVNFGCLSGDHFYAHMDKIGAAESLFGERVAHGYFVVSAAAGLFVDPGVGPVIANYGMENLRFIEPVKIGDTIQVRLTCKKKIKKAQKTAEDKPHGVVVWDVQVLNQHQQPVALYSILTLVARQNGDFIPAA
>NZ_AP017469.1|WP_096386580.1|1061454_1062462_-|1,2-phenylacetyl-CoA-epoxidase-subunit-A
MESDSQFKLKLKISESLSEEAMTQNAQHQALFEAKIAADTSIEAKDWMPDAYRQNLIRQIGQHAHSEVIGMLPEANWITRAPSLRRKAVLLAKVQDEAGHGLYLYSAAETLGCSRQDIYQKMLDGKMKYSSIFNYPTPSWADVGVIGWLVDGAAIVNQVALCRASYGPYARAMIKVCKEESFHQRQGYEAVTVLANGTAEQRAMLQDSINRFWWPVLMMFGPNDSDSPHSAQSMAWKIKRHSNDELRQKFVDNTVPQLEALGMTAPDKDLAWDEAIGHYRFGEIDWSEFYQVLKGQGLCNHERLSAKRRAWEEGSWVRDAAMAHAEKSATNATAA
>NZ_AP017469.1|WP_043491508.1|1061152_1061440_-|1,2-phenylacetyl-CoA-epoxidase-subunit-B
MTQAHWPLYEVFIRSKQGLAHRHVGSLHAADDQMALENARDAYTRRNEGCSIWVVKSEHLVASQPEDRAAFFDPSDDKVYRHPTFYTIPDGIKNM
>NZ_AP017469.1|WP_025800553.1|1060370_1061144_-|phenylacetate-CoA-oxygenase-subunit-PaaC
MTTLNQDLIQYVLRQADTPLILAQRLCAWCGHAPELEIDLALSNIGLDLLGQARNFYSYAAELSGELSGENVDEDSLAFGRDDLAFCNLLLAEQPNGGFNDTLVRQFFLDTYHFLLHQGLSQSSDPQLAAIGAKSLKEAEYHLRFSRGWMIRLGDGTELSQKKMQQAINDLWRFTGELFHSDDVERRLAEQGIAVNPESLQAPWLQIVQQVLQEATLQLPEGEAYRHGGKQGKHTEHLGFMLAEMQFLQRAYPGCRW
>NZ_AP017469.1|WP_096386577.1|1059833_1060343_-|phenylacetate-CoA-oxygenase-subunit-PaaJ
MEQRQPLNSLLTPEIHQIWQCLHEISDPELPVLSITDLGMVRGVAPLKNGWLVTFTPTYSGCPATEFLIDAIQTTLTTAGFSPIKVEIRLSPAWTTDWINAEAKKRLREYGVAPPQGLACEKPLSSGAVQCPQCGSHETQKISEFGSTACKALYRCKQCLEPFDYFKCI
>NZ_AP017469.1|WP_096386575.1|1058759_1059818_-|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK
MTVFHRLSIAAIERETPEAVAITLRVPDELKTHYRYKPGQHLTLKANVNGEELRRCYSICSSPQDGVLQIGVKAIHQGRFSSFVNQQLNVGDALEVMLPQGRFGYQPTGERQGNYLAIAAGSGITPMLSIIKTTLLLEPKSEFTLIYGNRTSRSIMFKEALCDLKNRFPQRLQILYLFSQESLDSPLLNGRIDSERLNLMGKSLLDFTTFDQAFICGPESMMDDAHTTLEAAGMAAENIHSERFNTAGISVRPANMTEREQTMVEIQLDGRRVNIAMSAQDDSILDAALRQGADLPYACKGGVCATCKCKLKSGEVEMGVNYSLEPDQLAAGYILSCQSWPKGDGVVLDFDV
>NZ_AP017469.1|WP_096386572.1|1057976_1058750_-|2,3-dehydroadipyl-CoA-hydratase
MSNDWILRHQQQRVLTLTLNRPDVRNALSTACLELLVSHLENADSDDSIGAVVITGSSRCFAAGADLRELQQQKVADAIIDRRPQVWQRFNAISKPIIAAVNGYALGAGCELALACDIVVSGENARFGLPEITLGLIPGAGGTQRLLRSVGKSLASQMVLTGKPINAQQARDAQLISEICVTELTLERAQQIATRISQQSPLALRAAKSALKAAQETTLSQGLNLERQHFVSLAGTDDRAEGIAAFFEKRSPEFKGR
>NZ_AP017469.1|WP_025800549.1|1057171_1057972_-|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase
MTSSDENMVLTHIEAGVLTITLNRPDRLNSFNDEMHRQLSEALKIAERDEAVRCILFTGAGRGFCAGQDLNDRNVSVEQAAPDLGLSVERFYNPLIRRMTALPKPIVCAVNGVAAGAGAAIALACDIVIASANASFIQSFCRLGLVPDSGGSWFLPRLAGHARAMGMALLGDKISAQQALEWGMIWQVVEPEMLAARTQELAQHLATQPTYGLGLIKKAMYSAATNTLDQQLDLERDLQRLGGRSEDYREGVSAFFQKRQPEFKGK
>NZ_AP017469.1|WP_096386570.1|1055624_1057169_-|3-hydroxyacyl-CoA-dehydrogenase
MSSPLLQGSVGVIGAGTMGIGIAQVAASAGHHVMLFDVNAEASSRALSALHQHLQQRVDAGKADADTTQQLLARIQIVTALTELASCALVIEAIAERLEIKQSLFRDLEAICSPQTLFASNTSSLSITAIASALKHPQRMAGLHFFNPAPVMKLVEIVRGLETDADTLNALRELAVAWKKQPVVCRSTPGFIVNRVARPFYAETLRALEEQIATPATLDAVLRDAGGFAMGPLQLTDLIGHDVNYAVTESVFHAFGSDPRFQPSLVQKELVEAGHLGRKSDRGFYRYPSDVQPVIAEFAPIETGAMPQRISAHGRWSALPEFAALLQQNGIAIEERKESTESSPFLRLDEVTFMLSNGELSSQIAVETRTPVVQFDLSVNHQQASAIAISAASGNSTAQTALVIRFLQSLGKNVIVLPDYPALLTLRTVAMLCNEALDVVNKGIASVEDIDLAMRLGVNYPVGPLAWGNQLGWQHILTTLENLNHFYADTRYRPAPLLRQLAAGYVSLATQEHH
>NZ_AP017469.1|WP_096386589.1|1066109_1067708_-|MFS-transporter
MLKTAPINTRGIWLPLIVLCMAQFLASADNVTLSIATHALMHDLGASMAQVSAANTMYPLIAGTFMIAGGMLGGVLGWRRTFRIGCAIYLLGELCATLAPSISFFIWAARILAGIGGSFMIPSVFGLITGLYQGRDRAMAFGALGAASGVSFALGPIICGMLLDTLGWRWAFSVMGGLLVIILLLSALIDEPAKSNQPLHFDFPAFILSTIGLFLVIFGILQISNWGLFAPFNPPFTLFGLSPALFLVLAGVLVLIIMLRWEKTHEARTGSALIPHAFLHTPQVRAGLYLTAYIFFAYSSGIFVVVSFAQVVSGLTAIQTGLLIVPFAICLAGFSLGLPLFIHQRNARRQCRVGLILGIIGAAVTAAGIGVHSFNRSLIIVGLCFIGSSMGVIAANAPYLVTSALPEKEARQSGGIQSAARDIGQALGVALVSTVMLTTLTFSMKHRIADITVTPQTRITIQNMTVFPYLSDQGFSNLLVQSGATKQDLPTITKLYQQSRARVSQAGLLAMALMTLLFLLGTRGILQPDGKK
>NZ_AP017469.1|WP_096386592.1|1067793_1069464_-|MFS-transporter
MSSIATPAVANAADSSTTIKWLPLLVLCLAQLSTSGDNATLSIATGALVKDLHASMDLINIANAMYSLAAGSLMVAAGMIGLIIGWKKTFRIGCSLLFLAELTAFFSPNMEVFTYGARLLSGVGGSFMIPSVLGLIASNYKGSQQAVAFGAIGAASGVSFAAGPIICGLLVDHMGWRTAFAAIAGLCIVIFAGSFLVPTPAKPERKVKFDALGVLLTVVGLFSVILGFLKVSSWGLFTPFNAPFTVAGLSPAPFLVLFGLVVLAVMLKWERYREAKVGSALIPMSFLATPQVRNGLYLTAFIFLAYGSGIFVTVSFVQVVAGLNGIQTGLMILPFALGVVFFSLGLPVIYKNANPKRLCQAALLIGTLGSILCIFGFQPSDYSTIVPVGMCLIGISMGTISAYSSYIVTSGLPPRDAQQSGGVQATSRNVGQAIGVAVCGMVMLTTVTMAVQGAARSDDHLSIDTRTKVSEITVIPYLSDNAFTKLMLDHGITQGDVPALSEVYKTARLNATRAGMVATAIMTLLFLFGTRNLPTRTKGNQPDGQTDDKKKKQAAR
>NZ_AP017469.1|WP_096388715.1|1069563_1071213_-|amidohydrolase
MMTNQTVIYAAKKIITMCPSQPEASHVAVRDGKILAVGTLEELEGWGEYTLDNTFANKIVMPGLIEAHSHATGGGMWQFPYVGYYDRPDYTGKIWQGCRSFDEVVTALQAIERTMTDPHAPLIAWGVDPIYFGSEKLGRQHLDKVSTTRPVAVIHMSIHLMGANTCALHDCGIFDDSAIEGVVKNEDGTLHGELVEFAAMGPILDKYGFWDALTTEQAIRNFGQEAFRAGCTSAADMGLTDFSNPELTANYIRMTRENSFPVRLLVAYGPPFVKKPFVEAIEFASDVMKHGHEKMLFGPMKIFLDGSIQGGSGRMLSPGYYKTGHNGAWNATPQVVEQQVYEIMSRGYQVHCHCNGDEASEAFIQAVEKTLNRIPAANHRATMQHAQMLREDQFKRIKSLGMCVNFFSNHIYYWGDQHYAKTMGPERANRMDACGSAVRHGIPFAFHSDCGITPINPLFTGWCAVNRVTASGRVLGEKEKISVAEALHAMTVGAAYTMKVDHLIGSIECGKYADFTILEQDPLAIEPMKLKDIGIWGTVLGGRLQPIQN
>NZ_AP017469.1|WP_096388716.1|1071374_1072829_+|PLP-dependent-aminotransferase-family-protein
MQLQLTGIKLEAGRKRSQQLYLLLRELIASEPLCGGSKLPATRELAKMLGVSRNTVMNAYERLFADGFLETRVGDGTYITLAGSGTRGQAQPSPPLNPPLHAGLRLPIAQQFNRHIVHDGLPSAFRIGLPALDLFPFEIWSRLQNRFWRREPIQHMGYGDPAGDIQLRELIAHYLRSARGLACDPAQILVTLGAQQAIMVSAAMLLRAEDEVVMENPCYWAAAGAFSCLGVHINAVGVDDDGLLTHQLAQIPKAKMAYVCPSCQYPTGVTMSLPRRLELLNWAIEREAWILEDDYDGEYRYSGTPLMPLAALDQSNRVIYIGSFSKVMYPGLRLGYMVAPPQLVSQLTLLRTMASRQPPINDQRVMADFIAEGHFQPHIRRMRRAGQLRRDALLKSWCQHLSHIGSMPEVASGLHVTIRLPNFEREQTLVAQAMSAGIEITPLSSLWLPESEENANHYGLILGFAGVSESAIERAVLKLKDIWR
>NZ_AP017469.1|WP_025800558.1|1073110_1074748_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVSMMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERILEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEVGREHTMYMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLAEWEQVIYEEANPGGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETKGVELLKGLDAILVPGGFGYRGIEGKIATARYARENNIPYLGICLGMQVALMEFARNVAGMADANSTEFVPDCKYPVVALISEWRDEEGNVEVRTEESDLGGTMRLGGQQCNLADGSLVRQMYGSPTIVERHRHRYEVNNMLLKQIEAAGLRVTGRSADNKLVEIIELPNHPWFVASQFHPEFTSTPRDGHPLFAGFVKAAGEYQKRQAK
>NZ_AP017469.1|WP_025800559.1|1074831_1076136_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFMGKGVLKAVAAVNGPIAQAVMGKDAKDQANIDKIMIDLDGTENKSKFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRIGSEVFHNLAKVLKSKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDVTLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLENLTKDYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIVNSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALAAQGTPAPFNGLKEVKGQ
>NZ_AP017469.1|WP_025800560.1|1076250_1076478_-|DUF465-domain-containing-protein
MFPEYRDLISRLKTEDVRFATLFHEHNQLDHTIRRAENRPGAPFDEQIAGLKREKLRLKDELYKILRSYEDEATT
>NZ_AP017469.1|WP_040044484.1|1076833_1077601_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MLKKMVLAGCFMAAMMGSSFAAQQTYVVGSGGTYRPFEFENSQKQLEGFDIDIIKAVAKAEGFDIKLVNTPWEGIFATLNSGDRDIIISGITITDKRQQMVDFSAPYFPAEQSIVVPNGSKVDSVNALKGQKVGVVNSSTGDIVVSEVLGKNSTDIKRFDNTPLMLQELYEDGLGAAVGDVGVVKYYIKNHPEKEFKLVPDSKFERQYFGIAVAKGNQELLGKINAGLKKIVADGTYAKIYTQWFDANVPTLPEK
>NZ_AP017469.1|WP_025800562.1|1077697_1078462_+|amino-acid-ABC-transporter-permease
MTGFRWEIIQEYAPLFAEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAENGPWRFVLRYFVQWPVRVYVSAFRGTPLFVQIMVVHFALVPLLINPRDGVLVTSGLMSVDFARMLRSDYGAFLSCIVAITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLLVQHMEKRLSKSDSR
>NZ_AP017469.1|WP_046449534.1|1078448_1079171_+|amino-acid-ABC-transporter-ATP-binding-protein
MIHVDNLQKQFGETHVLRGISCDIKPQEVVCIIGPSGSGKSTFLRCLNALEKPDGGEVSVNGFDVHNPKTNLNKMRESVGMVFQRFNLFPHMTVLDNLIMAPMSVKGMSRADALKRAEVLLDKVGLLDKIDAWPASLSGGQQQRVAIARSMAMDPSIILFDEPTSALDPELVGEVLEVMKKLALEGMTMVIVTHEMGFAREVADRVVFIDQGIIQEEGTPEQIFTAPKNPRTAAFLSKVL

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Crispr_ID: NZ_AP017469_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_3

1079241-1079332

Orphan

Consensus_repeat	Method
CTGCTCCTCCCCTGCGAAGGGGGAGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017469_3

>merge|NZ_AP017469|3|1079241-1079332|CRISPRCasFinder
CTGCTCCTCCCCTGCGAAGGGGGAGGCTGGGAGGGGGTCAGCTATGTTGAACAGAATCTCGAGCTGCTCCTCCCCCTGCGAAGGGGGAGGCT

>NZ_AP017469|3|3|1079241-1079332|CRISPRCasFinder
CTGCTCCTCCCCTGCGAAGGGGGAGGCT	GGGAGGGGGTCAGCTATGTTGAACAGAATCTCGAGC
TGCTCCTCCCCCTGCGAAGGGGGAGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_043491528.1\|1084456_1084912_-\|DUF5071-domain-containing-protein	unknown	unknown	gnl\|CDD\|213039
NZ_AP017469.1\|WP_096388716.1\|1071374_1072829_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_AP017469.1\|WP_043491525.1\|1080890_1082426_-\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_AP017469.1\|WP_025800558.1\|1073110_1074748_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_AP017469.1\|WP_040044486.1\|1079355_1080789_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_AP017469.1\|WP_046449531.1\|1084922_1085267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017469.1\|WP_025800562.1\|1077697_1078462_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_AP017469.1\|WP_096388715.1\|1069563_1071213_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238625
NZ_AP017469.1\|WP_025800567.1\|1086581_1087436_-\|co-chaperone-YbbN	unknown	unknown	gnl\|CDD\|225660
NZ_AP017469.1\|WP_025800568.1\|1087510_1088284_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181198
NZ_AP017469.1\|WP_172863833.1\|1088338_1088977_-\|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1	unknown	unknown	gnl\|CDD\|182521
NZ_AP017469.1\|WP_043491538.1\|1088947_1089634_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182569
NZ_AP017469.1\|WP_025800559.1\|1074831_1076136_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_AP017469.1\|WP_096386597.1\|1085333_1086260_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017469.1\|WP_040044484.1\|1076833_1077601_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
NZ_AP017469.1\|WP_046449534.1\|1078448_1079171_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_AP017469.1\|WP_096386592.1\|1067793_1069464_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_AP017469.1\|WP_096386595.1\|1082425_1084114_-\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_AP017469.1\|WP_096386589.1\|1066109_1067708_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_AP017469.1\|WP_025800560.1\|1076250_1076478_-\|DUF465-domain-containing-protein	unknown	unknown	gnl\|CDD\|183127

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_043491528.1\|1084456_1084912_-\|DUF5071-domain-containing-protein	gnl\|CDD\|213039	cd11743, Cthe_2751_like, Uncharacterized protein domain similar to Clostridium thermocellum 2751. Cthe_2751 has been found to form homodimers. Based on structural similarity to other families, a role in processing nucleic acids was suggested, though interactions with DNA could not be demonstrated.	7.23095e-37
NZ_AP017469.1\|WP_096388716.1\|1071374_1072829_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.98525e-136
NZ_AP017469.1\|WP_043491525.1\|1080890_1082426_-\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_AP017469.1\|WP_025800558.1\|1073110_1074748_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_AP017469.1\|WP_040044486.1\|1079355_1080789_-\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_AP017469.1\|WP_025800562.1\|1077697_1078462_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.50268e-77
NZ_AP017469.1\|WP_096388715.1\|1069563_1071213_-\|amidohydrolase	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	8.18264e-136
NZ_AP017469.1\|WP_025800567.1\|1086581_1087436_-\|co-chaperone-YbbN	gnl\|CDD\|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	1.06563e-110
NZ_AP017469.1\|WP_025800568.1\|1087510_1088284_-\|SDR-family-oxidoreductase	gnl\|CDD\|181198	PRK08017, PRK08017, SDR family oxidoreductase.	0
NZ_AP017469.1\|WP_172863833.1\|1088338_1088977_-\|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1	gnl\|CDD\|182521	PRK10528, PRK10528, multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional.	1.03789e-115
NZ_AP017469.1\|WP_043491538.1\|1088947_1089634_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|182569	PRK10584, PRK10584, putative ABC transporter ATP-binding protein YbbA; Provisional.	3.22081e-149
NZ_AP017469.1\|WP_025800559.1\|1074831_1076136_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_AP017469.1\|WP_040044484.1\|1076833_1077601_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.44748e-96
NZ_AP017469.1\|WP_046449534.1\|1078448_1079171_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.28451e-154
NZ_AP017469.1\|WP_096386592.1\|1067793_1069464_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.28792e-27
NZ_AP017469.1\|WP_096386595.1\|1082425_1084114_-\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_AP017469.1\|WP_096386589.1\|1066109_1067708_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.68877e-31
NZ_AP017469.1\|WP_025800560.1\|1076250_1076478_-\|DUF465-domain-containing-protein	gnl\|CDD\|183127	PRK11415, PRK11415, hypothetical protein; Provisional.	7.80615e-22

>NZ_AP017469.1|WP_046449534.1|1078448_1079171_+|amino-acid-ABC-transporter-ATP-binding-protein
MIHVDNLQKQFGETHVLRGISCDIKPQEVVCIIGPSGSGKSTFLRCLNALEKPDGGEVSVNGFDVHNPKTNLNKMRESVGMVFQRFNLFPHMTVLDNLIMAPMSVKGMSRADALKRAEVLLDKVGLLDKIDAWPASLSGGQQQRVAIARSMAMDPSIILFDEPTSALDPELVGEVLEVMKKLALEGMTMVIVTHEMGFAREVADRVVFIDQGIIQEEGTPEQIFTAPKNPRTAAFLSKVL
>NZ_AP017469.1|WP_025800562.1|1077697_1078462_+|amino-acid-ABC-transporter-permease
MTGFRWEIIQEYAPLFAEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAENGPWRFVLRYFVQWPVRVYVSAFRGTPLFVQIMVVHFALVPLLINPRDGVLVTSGLMSVDFARMLRSDYGAFLSCIVAITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLLVQHMEKRLSKSDSR
>NZ_AP017469.1|WP_040044484.1|1076833_1077601_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MLKKMVLAGCFMAAMMGSSFAAQQTYVVGSGGTYRPFEFENSQKQLEGFDIDIIKAVAKAEGFDIKLVNTPWEGIFATLNSGDRDIIISGITITDKRQQMVDFSAPYFPAEQSIVVPNGSKVDSVNALKGQKVGVVNSSTGDIVVSEVLGKNSTDIKRFDNTPLMLQELYEDGLGAAVGDVGVVKYYIKNHPEKEFKLVPDSKFERQYFGIAVAKGNQELLGKINAGLKKIVADGTYAKIYTQWFDANVPTLPEK
>NZ_AP017469.1|WP_025800560.1|1076250_1076478_-|DUF465-domain-containing-protein
MFPEYRDLISRLKTEDVRFATLFHEHNQLDHTIRRAENRPGAPFDEQIAGLKREKLRLKDELYKILRSYEDEATT
>NZ_AP017469.1|WP_025800559.1|1074831_1076136_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFMGKGVLKAVAAVNGPIAQAVMGKDAKDQANIDKIMIDLDGTENKSKFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRIGSEVFHNLAKVLKSKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDVTLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLENLTKDYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIVNSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALAAQGTPAPFNGLKEVKGQ
>NZ_AP017469.1|WP_025800558.1|1073110_1074748_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVSMMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERILEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEVGREHTMYMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLAEWEQVIYEEANPGGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETKGVELLKGLDAILVPGGFGYRGIEGKIATARYARENNIPYLGICLGMQVALMEFARNVAGMADANSTEFVPDCKYPVVALISEWRDEEGNVEVRTEESDLGGTMRLGGQQCNLADGSLVRQMYGSPTIVERHRHRYEVNNMLLKQIEAAGLRVTGRSADNKLVEIIELPNHPWFVASQFHPEFTSTPRDGHPLFAGFVKAAGEYQKRQAK
>NZ_AP017469.1|WP_096388716.1|1071374_1072829_+|PLP-dependent-aminotransferase-family-protein
MQLQLTGIKLEAGRKRSQQLYLLLRELIASEPLCGGSKLPATRELAKMLGVSRNTVMNAYERLFADGFLETRVGDGTYITLAGSGTRGQAQPSPPLNPPLHAGLRLPIAQQFNRHIVHDGLPSAFRIGLPALDLFPFEIWSRLQNRFWRREPIQHMGYGDPAGDIQLRELIAHYLRSARGLACDPAQILVTLGAQQAIMVSAAMLLRAEDEVVMENPCYWAAAGAFSCLGVHINAVGVDDDGLLTHQLAQIPKAKMAYVCPSCQYPTGVTMSLPRRLELLNWAIEREAWILEDDYDGEYRYSGTPLMPLAALDQSNRVIYIGSFSKVMYPGLRLGYMVAPPQLVSQLTLLRTMASRQPPINDQRVMADFIAEGHFQPHIRRMRRAGQLRRDALLKSWCQHLSHIGSMPEVASGLHVTIRLPNFEREQTLVAQAMSAGIEITPLSSLWLPESEENANHYGLILGFAGVSESAIERAVLKLKDIWR
>NZ_AP017469.1|WP_096388715.1|1069563_1071213_-|amidohydrolase
MMTNQTVIYAAKKIITMCPSQPEASHVAVRDGKILAVGTLEELEGWGEYTLDNTFANKIVMPGLIEAHSHATGGGMWQFPYVGYYDRPDYTGKIWQGCRSFDEVVTALQAIERTMTDPHAPLIAWGVDPIYFGSEKLGRQHLDKVSTTRPVAVIHMSIHLMGANTCALHDCGIFDDSAIEGVVKNEDGTLHGELVEFAAMGPILDKYGFWDALTTEQAIRNFGQEAFRAGCTSAADMGLTDFSNPELTANYIRMTRENSFPVRLLVAYGPPFVKKPFVEAIEFASDVMKHGHEKMLFGPMKIFLDGSIQGGSGRMLSPGYYKTGHNGAWNATPQVVEQQVYEIMSRGYQVHCHCNGDEASEAFIQAVEKTLNRIPAANHRATMQHAQMLREDQFKRIKSLGMCVNFFSNHIYYWGDQHYAKTMGPERANRMDACGSAVRHGIPFAFHSDCGITPINPLFTGWCAVNRVTASGRVLGEKEKISVAEALHAMTVGAAYTMKVDHLIGSIECGKYADFTILEQDPLAIEPMKLKDIGIWGTVLGGRLQPIQN
>NZ_AP017469.1|WP_096386592.1|1067793_1069464_-|MFS-transporter
MSSIATPAVANAADSSTTIKWLPLLVLCLAQLSTSGDNATLSIATGALVKDLHASMDLINIANAMYSLAAGSLMVAAGMIGLIIGWKKTFRIGCSLLFLAELTAFFSPNMEVFTYGARLLSGVGGSFMIPSVLGLIASNYKGSQQAVAFGAIGAASGVSFAAGPIICGLLVDHMGWRTAFAAIAGLCIVIFAGSFLVPTPAKPERKVKFDALGVLLTVVGLFSVILGFLKVSSWGLFTPFNAPFTVAGLSPAPFLVLFGLVVLAVMLKWERYREAKVGSALIPMSFLATPQVRNGLYLTAFIFLAYGSGIFVTVSFVQVVAGLNGIQTGLMILPFALGVVFFSLGLPVIYKNANPKRLCQAALLIGTLGSILCIFGFQPSDYSTIVPVGMCLIGISMGTISAYSSYIVTSGLPPRDAQQSGGVQATSRNVGQAIGVAVCGMVMLTTVTMAVQGAARSDDHLSIDTRTKVSEITVIPYLSDNAFTKLMLDHGITQGDVPALSEVYKTARLNATRAGMVATAIMTLLFLFGTRNLPTRTKGNQPDGQTDDKKKKQAAR
>NZ_AP017469.1|WP_096386589.1|1066109_1067708_-|MFS-transporter
MLKTAPINTRGIWLPLIVLCMAQFLASADNVTLSIATHALMHDLGASMAQVSAANTMYPLIAGTFMIAGGMLGGVLGWRRTFRIGCAIYLLGELCATLAPSISFFIWAARILAGIGGSFMIPSVFGLITGLYQGRDRAMAFGALGAASGVSFALGPIICGMLLDTLGWRWAFSVMGGLLVIILLLSALIDEPAKSNQPLHFDFPAFILSTIGLFLVIFGILQISNWGLFAPFNPPFTLFGLSPALFLVLAGVLVLIIMLRWEKTHEARTGSALIPHAFLHTPQVRAGLYLTAYIFFAYSSGIFVVVSFAQVVSGLTAIQTGLLIVPFAICLAGFSLGLPLFIHQRNARRQCRVGLILGIIGAAVTAAGIGVHSFNRSLIIVGLCFIGSSMGVIAANAPYLVTSALPEKEARQSGGIQSAARDIGQALGVALVSTVMLTTLTFSMKHRIADITVTPQTRITIQNMTVFPYLSDQGFSNLLVQSGATKQDLPTITKLYQQSRARVSQAGLLAMALMTLLFLLGTRGILQPDGKK
>NZ_AP017469.1|WP_040044486.1|1079355_1080789_-|amino-acid-permease
MQNNNETSPLQPHNTSHLKRGLNARHIRFLALGSAIGTGLFYGSAGAIQLAGPAVLLAYLVGGLAVFMVMRALGEMAVHQPVSGSFGHYASRYLGPLAGFITGWTYTFEMVIVGMADVTAFGIYMGLWFPDVSQWIWVLSIVCFIGALNLCSVKVFGEMEFWLSLIKVVAIIAMIVGGGAIMMFGFGQHEQATGFSNLWQHGGFMPNGITGVIASLAVVMFAFGGIEIIGVTASEARDPAKVIPKAINTVPVRILLFYVLTLMVLMAIYPWNSIGQHGSPFVEIFKSLGISSAAHVLNVVVITAAISAINSDIFGAGRMMYGMAKDGQAPQCFTKLTAGGVPWMTVLVMAIALLTGVVLNYLIPEKVFLIIASIATFATVWVWLMILLSQVAMRRQMSKEEVATLKFPVPFWPLAPALTIIFMAFVIALLGYFEDSRVALAVGVVWMALLTLAWWIWVRKPKGQSVNGFNAETEADV
>NZ_AP017469.1|WP_043491525.1|1080890_1082426_-|histidine-ammonia-lyase
MYELMLQPGKITLSQLREIYHHPVHIQLHSSAREPIRQSVACVERIVAEGRTAYGINTGFGLLASTRIETCDLENLQRSIVLSHAAGVGSANDDAIVRLIMVMKINSLARGFSGIREEVLDALIALVNAEVYPHIPVKGSVGASGDLAPLAHMSLVLLGEGQARYQGEWLPATQALEKAGLKPIQLAAKEGLALLNGTQVSTAYALRGLFDAEDMYASALVCGGLTVEAVLGSRSPFDARIHDVRGQIGQIDSAAAYRHLLGERSEVSDSHHNCGKVQDPYSLRCQPQVMGACLTQIRQAAAVLEIEANAVSDNPLVFAEQNDVVSGGNFHAEPVAMAADNLALALAEIGALSERRTSLMMDKHMSQLPPFLVNNGGVNSGFMIAQVTAAALASENKALAHPSSVDSLPTSANQEDHVSMAPAAGRRLWEMAENVRGILAIEWLSACQGLDFRNGLKTSPRLEQARQLLRESVAYYDKDRFFAPDIEAASQLLGSGQLKALIPSALLPSQA
>NZ_AP017469.1|WP_096386595.1|1082425_1084114_-|urocanate-hydratase
MTLPNRLREIDIRAPRGTQLNAKSWQTEAPLRMLMNNLDPEVAENPHELVVYGGIGRAARNWECYDKIVETLKNLNDDETLLVQSGKPVGVFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGDLTGRWVLTAGLGGMGGAQPLAATMAGLTSLNIECQQSRIDFRLKTGYVDEQATDLDDALARIKRYTDAGKAISIALCGNAAEILPELVRRGVRPDMVTDQTSAHDPLNGYLPKGWTWETYRERALAEPAFVVNAAKESMAEHVEAMLAFQKMGIPTFDYGNNIRQMAKEMGVTHAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDPEDIFKTDAMVKELIPDDEHLHHWLDMARERIHFQGLPARICWVGLGQRAKLGLAFNEMVRSGALSAPIVIGRDHLDSGSVASPNRETESMQDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAERIARVLHNDPATGVMRHADAGYEIAIECAHEQGLNLPMITSAQGKK
>NZ_AP017469.1|WP_043491528.1|1084456_1084912_-|DUF5071-domain-containing-protein
MDLIKKMCGSFDFTTISSELYALIPQDKTDVETAKKAVDYGYPGVAPILPVLIYWLQDLNWPVAQELTPFLAKIGAPLKQPVLDVLKTQDSIWKYWVVSELVDTTDLQLAKAIAPELQHLKLKTAASVDEDDISVNSAIDAILHKLQTQRP
>NZ_AP017469.1|WP_046449531.1|1084922_1085267_-|hypothetical-protein
MPNYYRLGNRTPANFTPRIADTVGPGAGLSMANTAPAVRAQVIDSALTQVTQIINTPTPGNPQHYSILPNPNVGQDLLDWAATREALLADNTWTNPLIGPYTTDVNTARTGQVN
>NZ_AP017469.1|WP_096386597.1|1085333_1086260_-|hypothetical-protein
MGKSPSIEEMEKKDKKSREYLDEIANELTNKLGNTYATLEKEAENFYQKEHEKPWSSDLYITGKQFDYQSVQEWSLASVSAIINKISAAVIGTVDGKVENLPAGTDAGDKAQDINKKYDMNKDKRLLIATNCFNLLAGIVGSFGNATSITVKHGTKSDPIGGGLRIFGSVGTQTFQRSSFFNNEKIATYQFAYIVRFSVEEFELQAKIALIDQYQNTLNVTKFASDKNDQQFFEDKITYEQWSVMSAKFEKVMEDVLKKIRELDPKKERGTQLAKEFISQNGLYRIFYSSNKHLLEAIKRREAGLLKI
>NZ_AP017469.1|WP_025800567.1|1086581_1087436_-|co-chaperone-YbbN
MLNNSVINVTEANLHQTLEQSASIPVLFYFWSERSQHCLQLNPILDKLASEYAGQFVLAKVDCDAEQMVASQFGLRAIPTVYLFKDGQPVDGFQGPQSEEFIRELLGRFLPKEEELKAAQAAEFIAEGKMAEALPLLKEARALDSKRSDIALMLAEVQIALNRSDEAETVLATIPMQDQDSRYQGLVAQIELLKQAADTPEIQLLQKQVDAEPENAVIAAQLALQLHQVGRNEEALELLMVHLRKDLTAADGAARKTLMDILAALGNGDALASKYRKQLYSLLY
>NZ_AP017469.1|WP_025800568.1|1087510_1088284_-|SDR-family-oxidoreductase
MQKAILITGCSSGIGLTAAQDLRNRGYRVLAACRKPQDVEVMRDLGMEGIELDLDDSESVERAAAEVIRITEGRLYALFNNGGFGLYGPLNTISRAELERQFATNLFGTHQLTQLLLPIMLPHGEGRIIQTSSVMGLVATPGRGAYAASKFALEGWSDALRMELHGSGIHVSLIEPGPINTRFTSNVHQMEKDKPVTNPGIAERFTLTPDAILPKLHHALESKRPKLRYPVTLVAHALTVLRRILPGRLLDKVLRGN
>NZ_AP017469.1|WP_172863833.1|1088338_1088977_-|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1
MNFKNIFRWHIPFLLLFSLLCGRAMAADTLLILGDSLSAGYRLPIADSWATRLAQQWQKTTPTVSVVNGSISGDTADQGLARLPALLKQHQPRWVLIELGANDGLRGFAPADIETALGKIITQVQQAKAQPLLMQIQLPPNYGRRYTEAFAAIYPKLAKQHQIPLIPFYMEQVALKPEWMQQDGLHPNGEAQPFIAQWMSEQLHPLLTNPHQ
>NZ_AP017469.1|WP_043491538.1|1088947_1089634_+|ABC-transporter-ATP-binding-protein
MPTENVLEVHHLAKEVGQGDSQLSILTGVELVVKPAQTLALIGESGSGKSTLLGILAGLDDGTSGEVSLLGQRLDQMDEEQRAALRARDVGFVFQSFMLVPTLTALENVQLPALLRGDSDRQSRQQAVQLLEQLGLGKRLNHLPAQLSGGEQQRVALARAFSGRPKVLFADEPTGNLDRHTGDRIADLLFSLNTDFDTTLILVTHDPQLAARCQRRMRLVEGVLQEEA

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Crispr_ID: NZ_AP017469_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_4

2791380-2793029

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR

27 spacers

The CRISPR arrays of NZ_AP017469_4

>merge|NZ_AP017469|4|2791380-2793029|CRISPRCasFinder,CRT,PILER-CR
TACCTAAGCTGCCTGTACGGCAGTGAACGGTGTGTTGCGTTGTGTTTCCATACCGACTATTTTCTAAGCTGCCTGTACGGCAGTGAACTCACGTCAGTTAAATACGGCGTTCCTGATGTTTTTCTAAACTGCCTGTACGGCAGTGAACCGGACTAATAGCCGCGTTAGGTAAAACAACTTTTTCTAAGCTGCCTGTACGGCAGTGAACTTTGAATGCATACGGCGAGGCTGGAATATGTGTTTCTAAGCTGCCTGTACGGCAGTGAACATGGTGTCAGCGGTTCGTCTCTGTGGCCATTTTTTCTAAGCTGCCTGTACGGCAGTGAACACCATTGGTCCGAGAAACTTGCGATGGGTGCTTTTCTAAGCTGCCTGTACGGCAGTGAACTTCGCTTGCTCAAAACAAATGACTAATATTTTTTTCTAAGCTGCCTGTACGGCAGTGAACCGCAAGCTTACGGCCCGCCGGTGACTCAGCCGTTTCTAAGCTGCCTGTACGGCAGTGAACTTCAATTAAAGCCGACATACCATCATGAGTTATTTCTAAGCTGCCTGTACGGCAGTGAACGCAAATTCAATCCTACCGAAATTAAGAGAGGCTTTCTAAGCTGCCTGTACGGCAGTGAACGCGCGGACCATACGCCAATGCAGATAGGGCATTTTCTAAGCTGCCTGTACGGCAGTGAACGCTGCGAGCCATCTAAAAATACAGCGCCTACCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTATTACGATTGCATTAAAGATCGCATGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACATGATGCGCGATTTGGACGCACTGCGTTTCATTTTCTAAGCTGCCTGTACGGCAGTGAACTCCTACAGCTGAAGAATGCGCGGGCTTTGATTTTTCTAAGCTGCCTGTACGGCAGTGAACAAGGTTTACTGGCAGTATCGCCACCCAGAGACTTTCTAAGCTGCCTGTACGGCAGTGAACAACATCGCAAAGCGGCTTGAGTATTTTTTGTTTTTCTAAGCTGCCTGTACGGCAGTGAACTTGCTAAACTTCGAGGTGTGGAGGTTGGTACTTTTCTAAGCTGCCTGTACGGCAGTGAACAAACCTACATCCGGTACCGCATCACAGATACATTTCTAAGCTGCCTGTACGGCAGTGAACTAACAGAGTTATACCGTTGTGACTTTCATGATTTTCTAAGCTGCCTGTACGGCAGTGAACGGCATACATGGGCGAGCTGGTTAGTTCAAGCTTTTCTAAGCTGCCTGTACGGCAGTGAACCGTATGTATCCGCAACAACAATCATTTCACCGTTTCTAAGCTGCCTGTACGGCAGTGAACTTACTTCTGCTTGAGTTTCCTACCGCGCCAGCAGTTTCTAAGCTGCCTGTACGGCAGTGAACTTACTTTGTATTCGCCGACTTCACGAATGGCATTTCTAAGCTGCCTGTACGGCAGTGAACCTGTCCCAGAGAATTACCGCAGGCCACTGATATTTCTAAGCTGCCTGTACGGCAGTGAACTTGTTCGAAGAGGCATGCCTGCGCTGGATAGATTTCTAAGCTGCCTGTACGGCAGTGAACTGTAAGGAGTGGAATATGGCTTTAGGGCGTGTTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_AP017469|4|4|2791380-2793029|CRISPRCasFinder
TACCTAAGCTGCCTGTACGGCAGTGAAC	GGTGTGTTGCGTTGTGTTTCCATACCGACTAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCACGTCAGTTAAATACGGCGTTCCTGATGTT
TTTCTAAACTGCCTGTACGGCAGTGAAC	CGGACTAATAGCCGCGTTAGGTAAAACAACTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGAATGCATACGGCGAGGCTGGAATATGTG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGGTGTCAGCGGTTCGTCTCTGTGGCCATTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACCATTGGTCCGAGAAACTTGCGATGGGTGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCGCTTGCTCAAAACAAATGACTAATATTTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCAAGCTTACGGCCCGCCGGTGACTCAGCCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCAATTAAAGCCGACATACCATCATGAGTTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCAAATTCAATCCTACCGAAATTAAGAGAGGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGCGGACCATACGCCAATGCAGATAGGGCAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCTGCGAGCCATCTAAAAATACAGCGCCTACC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTATTACGATTGCATTAAAGATCGCATGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGATGCGCGATTTGGACGCACTGCGTTTCAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCTACAGCTGAAGAATGCGCGGGCTTTGATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAGGTTTACTGGCAGTATCGCCACCCAGAGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACATCGCAAAGCGGCTTGAGTATTTTTTGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGCTAAACTTCGAGGTGTGGAGGTTGGTACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAACCTACATCCGGTACCGCATCACAGATACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAACAGAGTTATACCGTTGTGACTTTCATGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCATACATGGGCGAGCTGGTTAGTTCAAGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTATGTATCCGCAACAACAATCATTTCACCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACTTCTGCTTGAGTTTCCTACCGCGCCAGCAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACTTTGTATTCGCCGACTTCACGAATGGCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGTCCCAGAGAATTACCGCAGGCCACTGATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGTTCGAAGAGGCATGCCTGCGCTGGATAGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAAGGAGTGGAATATGGCTTTAGGGCGTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_AP017469|4|2|2791380-2793029|CRT
TACCTAAGCTGCCTGTACGGCAGTGAAC	GGTGTGTTGCGTTGTGTTTCCATACCGACTAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCACGTCAGTTAAATACGGCGTTCCTGATGTT
TTTCTAAACTGCCTGTACGGCAGTGAAC	CGGACTAATAGCCGCGTTAGGTAAAACAACTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGAATGCATACGGCGAGGCTGGAATATGTG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGGTGTCAGCGGTTCGTCTCTGTGGCCATTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACCATTGGTCCGAGAAACTTGCGATGGGTGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCGCTTGCTCAAAACAAATGACTAATATTTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCAAGCTTACGGCCCGCCGGTGACTCAGCCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCAATTAAAGCCGACATACCATCATGAGTTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCAAATTCAATCCTACCGAAATTAAGAGAGGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGCGGACCATACGCCAATGCAGATAGGGCAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCTGCGAGCCATCTAAAAATACAGCGCCTACC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTATTACGATTGCATTAAAGATCGCATGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGATGCGCGATTTGGACGCACTGCGTTTCAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCTACAGCTGAAGAATGCGCGGGCTTTGATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAGGTTTACTGGCAGTATCGCCACCCAGAGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACATCGCAAAGCGGCTTGAGTATTTTTTGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGCTAAACTTCGAGGTGTGGAGGTTGGTACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAACCTACATCCGGTACCGCATCACAGATACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAACAGAGTTATACCGTTGTGACTTTCATGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCATACATGGGCGAGCTGGTTAGTTCAAGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTATGTATCCGCAACAACAATCATTTCACCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACTTCTGCTTGAGTTTCCTACCGCGCCAGCAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACTTTGTATTCGCCGACTTCACGAATGGCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGTCCCAGAGAATTACCGCAGGCCACTGATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGTTCGAAGAGGCATGCCTGCGCTGGATAGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAAGGAGTGGAATATGGCTTTAGGGCGTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_AP017469|4|2|2791440-2793029|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCACGTCAGTTAAATACGGCGTTCCTGATGTT
TTTCTAAACTGCCTGTACGGCAGTGAAC	CGGACTAATAGCCGCGTTAGGTAAAACAACTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGAATGCATACGGCGAGGCTGGAATATGTG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGGTGTCAGCGGTTCGTCTCTGTGGCCATTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACCATTGGTCCGAGAAACTTGCGATGGGTGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCGCTTGCTCAAAACAAATGACTAATATTTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGCAAGCTTACGGCCCGCCGGTGACTCAGCCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTCAATTAAAGCCGACATACCATCATGAGTTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCAAATTCAATCCTACCGAAATTAAGAGAGGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGCGGACCATACGCCAATGCAGATAGGGCAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCTGCGAGCCATCTAAAAATACAGCGCCTACC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTATTACGATTGCATTAAAGATCGCATGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGATGCGCGATTTGGACGCACTGCGTTTCAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCTACAGCTGAAGAATGCGCGGGCTTTGATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAGGTTTACTGGCAGTATCGCCACCCAGAGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACATCGCAAAGCGGCTTGAGTATTTTTTGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGCTAAACTTCGAGGTGTGGAGGTTGGTACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AAACCTACATCCGGTACCGCATCACAGATACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAACAGAGTTATACCGTTGTGACTTTCATGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCATACATGGGCGAGCTGGTTAGTTCAAGCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTATGTATCCGCAACAACAATCATTTCACCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACTTCTGCTTGAGTTTCCTACCGCGCCAGCAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTACTTTGTATTCGCCGACTTCACGAATGGCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGTCCCAGAGAATTACCGCAGGCCACTGATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGTTCGAAGAGGCATGCCTGCGCTGGATAGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGTAAGGAGTGGAATATGGCTTTAGGGCGTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_043493974.1\|2795731_2795971_+\|YecH-family-protein	unknown	unknown	gnl\|CDD\|337821
NZ_AP017469.1\|WP_096387998.1\|2777955_2780178_+\|mechanosensitive-channel-protein	unknown	unknown	gnl\|CDD\|183147
NZ_AP017469.1\|WP_096388005.1\|2788113_2789721_+\|microcin-C-ABC-transporter-ATP-binding-protein-YejF	unknown	unknown	gnl\|CDD\|237917
NZ_AP017469.1\|WP_096388002.1\|2781414_2782050_+\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_AP017469.1\|WP_043493963.1\|2785992_2787090_+\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|185087
NZ_AP017469.1\|WP_096388000.1\|2780228_2781176_-\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	unknown	unknown	gnl\|CDD\|236964
NZ_AP017469.1\|WP_025798093.1\|2799497_2799725_+\|YejL-family-protein	unknown	unknown	gnl\|CDD\|237471
NZ_AP017469.1\|WP_046450259.1\|2782346_2783921_+\|cyclic-di-GMP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182541
NZ_AP017469.1\|WP_096388011.1\|2799754_2801539_+\|DUF3413-domain-containing-protein	unknown	unknown	gnl\|CDD\|225625
NZ_AP017469.1\|WP_038502349.1\|2793374_2794586_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182964
NZ_AP017469.1\|WP_096388013.1\|2801747_2802188_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240039
NZ_AP017469.1\|WP_043493971.1\|2789801_2790197_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183333
NZ_AP017469.1\|WP_096388009.1\|2798281_2799289_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_AP017469.1\|WP_096388015.1\|2802636_2803785_+\|membrane-associated-sensor-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_AP017469.1\|WP_046450254.1\|2795993_2797754_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223989
NZ_AP017469.1\|WP_004089547.1\|2797900_2798185_+\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|180318
NZ_AP017469.1\|WP_096388003.1\|2784154_2785981_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_AP017469.1\|WP_096388007.1\|2790865_2791318_-\|DUF3828-domain-containing-protein	unknown	unknown	gnl\|CDD\|372360
NZ_AP017469.1\|WP_038502345.1\|2787089_2788112_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226690
NZ_AP017469.1\|WP_025798102.1\|2794695_2795418_-\|16S-rRNA-pseudouridine(516)-synthase-RsuA	unknown	unknown	gnl\|CDD\|236774

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_043493974.1\|2795731_2795971_+\|YecH-family-protein	gnl\|CDD\|337821	pfam10678, DUF2492, Protein of unknown function (DUF2492). This is a bacterial family of uncharacterized proteins.	8.93246e-40
NZ_AP017469.1\|WP_096387998.1\|2777955_2780178_+\|mechanosensitive-channel-protein	gnl\|CDD\|183147	PRK11465, PRK11465, putative mechanosensitive channel protein; Provisional.	0
NZ_AP017469.1\|WP_096388005.1\|2788113_2789721_+\|microcin-C-ABC-transporter-ATP-binding-protein-YejF	gnl\|CDD\|237917	PRK15134, PRK15134, microcin C ABC transporter ATP-binding protein YejF; Provisional.	0
NZ_AP017469.1\|WP_096388002.1\|2781414_2782050_+\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	2.20838e-36
NZ_AP017469.1\|WP_043493963.1\|2785992_2787090_+\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|185087	PRK15133, PRK15133, microcin C ABC transporter permease YejB; Provisional.	0
NZ_AP017469.1\|WP_096388000.1\|2780228_2781176_-\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	gnl\|CDD\|236964	PRK11727, PRK11727, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF.	0
NZ_AP017469.1\|WP_025798093.1\|2799497_2799725_+\|YejL-family-protein	gnl\|CDD\|237471	PRK13689, PRK13689, hypothetical protein; Provisional.	4.13199e-41
NZ_AP017469.1\|WP_046450259.1\|2782346_2783921_+\|cyclic-di-GMP-phosphodiesterase	gnl\|CDD\|182541	PRK10551, PRK10551, cyclic di-GMP phosphodiesterase.	0
NZ_AP017469.1\|WP_096388011.1\|2799754_2801539_+\|DUF3413-domain-containing-protein	gnl\|CDD\|225625	COG3083, COG3083, Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only].	0
NZ_AP017469.1\|WP_038502349.1\|2793374_2794586_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182964	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_AP017469.1\|WP_096388013.1\|2801747_2802188_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240039	cd04683, Nudix_Hydrolase_24, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	9.05071e-44
NZ_AP017469.1\|WP_043493971.1\|2789801_2790197_-\|hypothetical-protein	gnl\|CDD\|183333	PRK11835, PRK11835, hypothetical protein; Provisional.	5.10366e-72
NZ_AP017469.1\|WP_096388009.1\|2798281_2799289_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_AP017469.1\|WP_096388015.1\|2802636_2803785_+\|membrane-associated-sensor-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.74005e-58
NZ_AP017469.1\|WP_046450254.1\|2795993_2797754_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	8.78526e-96
NZ_AP017469.1\|WP_004089547.1\|2797900_2798185_+\|50S-ribosomal-protein-L25	gnl\|CDD\|180318	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed.	4.48936e-54
NZ_AP017469.1\|WP_096388003.1\|2784154_2785981_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_AP017469.1\|WP_096388007.1\|2790865_2791318_-\|DUF3828-domain-containing-protein	gnl\|CDD\|372360	pfam12883, DUF3828, Protein of unknown function (DUF3828). This is a family of bacterial proteins of unknown function.	7.0546e-09
NZ_AP017469.1\|WP_038502345.1\|2787089_2788112_+\|ABC-transporter-permease-subunit	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_AP017469.1\|WP_025798102.1\|2794695_2795418_-\|16S-rRNA-pseudouridine(516)-synthase-RsuA	gnl\|CDD\|236774	PRK10839, PRK10839, 16S rRNA pseudouridine(516) synthase RsuA.	1.07929e-172

>NZ_AP017469.1|WP_096388007.1|2790865_2791318_-|DUF3828-domain-containing-protein
MSRLLILLFFISSPVFAVSDINNATKAALEFNKWYLQQIEKDVYPLLGNRSPEMSEYVTAETLGKLHKAVNSDDEFYDADFFTRSQDIGADWPKNVTVVSSDLDPVCLNVYVAYGKDMSHTVIDCMVKEKGKWKIQSVAQQAIVPNENLK
>NZ_AP017469.1|WP_043493971.1|2789801_2790197_-|hypothetical-protein
MNSFQLSIVHRLPQSYRWSSGLTGVQVEPIYLAKTTGAENTDVNNTVIDNNAIDNNSLIGLKLLSEEGEAAWQIMKRLNQSLQEMQVNCSVVELDGEPCLFVHLEDESAAMCRLKNVGVAIAEPIVAQYPF
>NZ_AP017469.1|WP_096388005.1|2788113_2789721_+|microcin-C-ABC-transporter-ATP-binding-protein-YejF
MAKHSQPPLLSIRDLNICFRSGEVTRPVVNGVSLEINAGETLALVGESGSGKSVTALSILRLLSSPPAEYPQGDILFNGQSLLHATEPYLRSVRGNEIAMIFQEPMVSLNPLHSIEKQLAEVLSLHRGMRRTQARAEILRCLERVGIRSPEKRLNDYPHQLSGGERQRIMIAMAILTRPKLLIADEPTTALDVSVQAQILELLAELKQELNMGMLFITHNLNIVKRLADRVAVMHDGNIVEIGECQSLFAAPQHPYTKQLLDAIPSGDPVALPQPTQTLLEVKDLSVRFPIRQGILRRTVGYNAIVNQLNFTLRRGESLGLVGESGSGKSTTGLALLRLLPSQGEIWFEGTPLHQLNLKQLQPYRSQIQVVFQDPYSALNPRLNVQQIIAEGLQVHQKLSAQEREQRVISAMTEVGLDPETRHRYPTEFSGGQRQRIAIARALILEPRLLILDEPTSSLDRSVQAQILALLKNLQQRHQLTYLFISHDLQVVRSLCHQVMVMRNGKVIEHGDCAEVFARPAQDYTRQLLAFADTP
>NZ_AP017469.1|WP_038502345.1|2787089_2788112_+|ABC-transporter-permease-subunit
MKLNPINQARWQRFKTNRRGYWSMWIFLLVFIMSLGSELIANDKPLLLRYDQHWYAPFLVNYPETTFGGDFKTATDYQDPLIRSNIEQHGWAIWAPIRYSYNSINFATEVPFPSPPSAQHWLGTNENGNDILAQVLYGLRVSILFGLMLTVLSSVIGITVGATQGFYGGKVDLIGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVIFGWMGLVGVVRAEFLRTRNFDYIRAARAMGVSDRTIMLRHMLPNAMVATLTFLPFILCGAITTLTSLDFLGFGLPTGSPSLGSLLLQGKNNLQAPWLGITAFAVLAILLSLLIFMFEAVRDAFDPSKVN
>NZ_AP017469.1|WP_043493963.1|2785992_2787090_+|microcin-C-ABC-transporter-permease-YejB
MTAYLIRRLLLIIPTLWAIITINFFIVQIAPGGPVDQAIANIEMGQNAGFGAGGGAHVGAAHTGIAASNVGEGQYRGARGLDPQIIAEIEKRFGFDKPLHQRYFDMLWNYIRFDFGDSLFRGGSVMSLVKQSLPVSVSLGLWSTLIIYLVSIPLGIRKAVHNGSRFDTWSSTLIIIGYAIPAFLFAIMLIVLFAGGSYWDWFPLRGLVSSNFSSLSWYDKITDYLWHITLPVLATVIGGFASLTMLTKNSFLDEVRKQYVVTARAKGLDDKKILYRHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYDAILQRDYPVMFGTLYIFTLLGLLLNIISDITYTLVDPRIDFEARH
>NZ_AP017469.1|WP_096388003.1|2784154_2785981_+|ABC-transporter-substrate-binding-protein
MYSRLLKTLCTVVPIVAAFSFNLRADVINESYAFAILGEPKYSSDFTHFDYVNPAAPKGGDITLSALGTYDSFNSYASRGHPAVRANQLYDTLFTNSADEIGSYYPLIGETVRYDDKFSWAEVNINADARFQDNTPITAQDVQFSFNKFMTEGVPQYRSYYQGVKVKAISRLTVRFELPKPDKEMMLSLIGGLKVMPESFWKNHKLSEPLNTPPLGSGPYRISDYRLGQFVTYSRVTNYWAANLPVNRGQYNFDTIRYDYYLDDKVALEAFKAGAFDFRMETSPKNWATQYSGGNFAKNYIVKSDETNQSAQDTRWLAFNTQRPIFADRRVREAISLAFDFEWMNKALYYDAYQRTNSYFQNTQYAARGYPDSAELAWLAPLKGKIPAEVFNQVYQPAATDGSGNDRENLLKATKLLEDAGWTIKDQRLVNKVTGKPFAFELLLPSSSNFQYVMPFKHNLEKLGITLNLREVDTSQYSNRVRSRDFDMFPTVYGGMNYPDPSLKILWRSDYISSTWNSAGVQDPAVDSLIDSIISHQGQPDALLSLGRALDRVLTWNYYMLPMWYSNHDRIAYWDKFSMPALRPAYDLGFDTWWYDINRAANLPQQRR
>NZ_AP017469.1|WP_046450259.1|2782346_2783921_+|cyclic-di-GMP-phosphodiesterase
MVLPSALYRKPVSTSLRILISTLIAALVAIVFVILAGHAIQHQRQNQQYELAKTGLMYATHLADDLDQKMVSLLPLTALDCESVVNTLASKAVFSGGVRAYILVRDGIAVCSSVTHSMSSPASKIYPKLDLNRDSDMVLQQGTPLVPDRPVIAFWHSIGDGTRTGVLLTLDINPAPYMLFFSRERTISGLALTIKDRAISTFEPKIVAESALPAHPDIIMQDEKNRFTFRLYGSPLSAGDLGLLGLVTLLVAMVAWLITFYVLSQQRRLDRDILQGIKRGQFFLVYQPVIHSETQLPGGFEALIRWKHPKLGLVPPDEFIPYCESEGLIDRLTQHIMELAAQDAHRLIDFVPKGTKLGLNISPLHMTLDSFKADVRHFLDLMPTEHFIPLFEITERSMVQDGGAEKIFDWLHACGIELAIDDFGTGHSALIYLQRYKIDYLKIDRGFVNSIGLETVTAPVLDAVLELAQKLKLQIVAEGIETEEQAEYLRQRHVDYLQGYLFCRPLPLEQLCDYYQQHVNGKLV
>NZ_AP017469.1|WP_096388002.1|2781414_2782050_+|flavin-reductase-family-protein
MSSPFEYYSYQPRQGHGLSHDPLNAIIGPRPIGWISSISADGKHNLAPYSFFNCFSYHPPVIGFASSGWKDSVANINETGEFVWNLATIETAEAMNQSSAALSRGEDEFVFSGVNMQTSQWVKAARVAESPVNFECKLTQCIQLQDQYGQPFDSWLILGEVIGIHIAKNLLNNQGVYQTAAANPILRAGGPSAYYTISDENRFDMLRPIIK
>NZ_AP017469.1|WP_096388000.1|2780228_2781176_-|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF
MKNPKKKNFPAQKTNLHPRNLHRERYDFTTLCETSPELKAFVFRNQWGDDSIDFAEPLAVKALNSALLKHFYQVEHWDIPEGYLCPPIPGRADYLHYLADVLAADHGYQVPRGQNVCILDIGVGANCIYPLIGQHAYGWRFTGTEVDTVALKSAGAVIKANPQAAKNIRLRQQQDPNKILKGAIKSGEHYAATMCNPPFHRSAEDALSGTRRKLTNLGRDASAPVLNFGGKAGELWCEGGEVAFITKMIEESESFAKQVGWFTSLVSRQENLPAIYEALEEVEALDVRTIEMSQGQKVSRFIAWTFLPENKRKIR
>NZ_AP017469.1|WP_096387998.1|2777955_2780178_+|mechanosensitive-channel-protein
MLQGARLIPFFTRYLVLLAVLFFSCSASVNAVEPQKETDSKAAYSALADILSDTNSRDALIAELRDSAKTGKPLAEKSASTVPAETRDETFADQLDSNIQGYLTVAQSKLDRLITALKSPPHKTFNPQTFWPALTHFLFTVAVTFALFLAIRFFATPFYKRIGSWGHKAREKRADWARRPTAIISAFVIDLLILLFCVTAGNIIATTFGTNSPVTMRQQALFLNAFALIEFFKAILRLIFAPKFDYLRPFPFSDATAKYWNTRLAWLSGLIGYGLMVVVPIIQVQLGASSAVLVNFCIMLALTVYAIGLILVNRLRIQKEIAALGNRSLAFFGVFLHALSHIWHILAIVYFLVLFLLSQFDPGSSLAFMMSATIKSLIVVGSGALISGLLTRWISRRITLPADIKLKYPMLERRVNSYIPSALQIMRFIVVVAILLFLLDAWHIFGLRAWLDSATGEKIIGGLVHILLIMFIAVLGWTLLASVIEHRLSLEMDNPKHPGARERTLLTLFRNVLSIVITTITVMIILSQIGINIAPLLAGAGALTLAVSFGAQTLVKDVINGIFIQFENGMNTGEYVTVFGITGTVERMTIRSIGLRDDYGVYHLVPYSSITTVANYAREFGVYRANYVISRDEDIEKANEVLKQAVAELRDNPRLKSLLIGEPAFNGVVKLDDVSFTLRTTIRTVALQQWTIQYALDKLVKEHFQRAGIKTPHQNVQISYAAPEQQALLPPQNDTNNVEK
>NZ_AP017469.1|WP_038502349.1|2793374_2794586_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQTPRSSHLGLILILGLLSMLMPLAIDMYLPSMPVIAEQFGVPSGDVQMTLSAYTLGFAFGQMLYGPMADSIGRKPVIMYGTLFFALAGAACAMAQSVDQLIVMRLIHGLAAAAASVVINALMRDMFTKDDFARMMSFVVLVMTIAPLLAPIMGGALLIWFSWHAIFWAMAGAALLGTVLVAIFIKETLPKEKRQKFRLRTTLGNFASLFRHKRVLCYMLASGFSFAGMFSFLSAGPFVYIDLNGVSPQHFGYYFALNIVFLFIMTLINSRNVRRFGAINMLRFGLLVQFVMGIWLVITAMLDLGFWSLVIGVAAYVGCIAMITSNAMAVILDDFPHMAGTASSLAGTLRFSLGAVVGTLLALASARSEWPMVSSMFLCIFAAMMLFLYASRPAKASNRIDPA
>NZ_AP017469.1|WP_025798102.1|2794695_2795418_-|16S-rRNA-pseudouridine(516)-synthase-RsuA
MRLDKFLSQQLGISRALIARELRAKRVTVDGEVVKSGAHKLTPEQEVAFDGQVLEQIHGPRYFMLHKPEGYVCSTDDPDHSTILYFIEEPLAEKLHAAGRLDLDTTGLVLLTDDGQWSHRITSPKHQCDKTYLVTLEHPLADDTAEQFAQGVQLHGEKDLTKPATLEQLDANVVRLTISEGRYHQVKRMFAAVGNRVVELHRERIGDIVLDEDLEPGEYRPLTEEEIASVGLPAELLAKD
>NZ_AP017469.1|WP_043493974.1|2795731_2795971_+|YecH-family-protein
MSSIHGHEVLNMMIESGEQFSTESLVASIEQRFGADARFHTCSQQDLTAAQLVEFLASRGKFIPSDSGFNTHSSKICQH
>NZ_AP017469.1|WP_046450254.1|2795993_2797754_+|DEAD/DEAH-box-helicase
MAFTLRPYQREAVEATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKIARGRVLVLAHVKELVAQNHSKYCAYGLEADIFSAGLQQKESSGKVVFGSVQSVARNLPLFDGEFSLLIVDECHRISDSDDSQYQQILQHLRNNNPKLRLLGLTATPYRLGKGWIYQYHYHGITRGDSNSLFRDCIYELPLRYMIKNKFLVPPERLDMPVVQYDFSRLEPSSNGLFREVDLNRELKDQQRITPHIVSQIMEFAATRKGVMIFASTVEHAREIHGLLPPEQAALVSAETPGDERDAIINAFKRQELLYLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKTDCLILDYAGNPHDLFTPEVGTTKPHSDSQPVQVFCPGCGFANTFWGKTTENGDIIEHYGRRCQGWLEDDEGGREQCDYRFRFKTCPHCGAENDIAARRCHQCNQVLVDPDDMLKEALKLKDALVLRCGGMQLQHGEDDKGEWLSITYYDEDGADVSERFRLNTPAQRTAFMQLFLRPHLRAPGIELVWKKATDIVAQQDKLRYPDFVVARMKGRFWQIRQKVFDYQGRYRKADSLSG
>NZ_AP017469.1|WP_004089547.1|2797900_2798185_+|50S-ribosomal-protein-L25
MFTIEATARKEQGKGASRRLRTSGKFPAIVYGGNQEPVAVEIDHDTTWNMQEKEGFYEQVIALMIDGKETKVKVQAVQRHPFKRKLTHVDFVRA
>NZ_AP017469.1|WP_096388009.1|2798281_2799289_-|nucleoid-associated-protein-YejK
MSLDLEQIALHQLVKRDEQQLDVVLRDSLLAKNAAVEEMMAELHRVYSAKSKAYGTFSEESELAEALRNYRRGNEDFLAFSRAATGRLRDELAKYPFADGGVVLFCQYRYLAVEYLLIAVLNSCSSMRVNEELDISSTHYLDIMRADIVARVDLTEWETNPESHRYLTFLKGRVGRKVSDFFMDFLAASEGLDAKAQNRGLLQAVDDYCAEGQLDKNERQAYRQQVYSYCNGQLQAGEEIELEALAKEIPAVGEKDFQQFTVEQGYDLEESFPADRSTLRQLTKMAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRSGGGN
>NZ_AP017469.1|WP_025798093.1|2799497_2799725_+|YejL-family-protein
MPQSSRYSDEHVEQLLSELANVLESHHTPNDLSLMVLGNMVTNLINTSIAPAQRRAIARSFAEALQASIREDKAH
>NZ_AP017469.1|WP_096388011.1|2799754_2801539_+|DUF3413-domain-containing-protein
MVTNRQRYREKVSQMISWGHWFALFNILLGLLLGSRYLFVADWPSSLFGRVYAMISWLGHFSFIGFAAYLLIIFPLTFVVMSQRLLRFLSAALATAGLTLLLVDAEVFTRFHLHLNPVVWELVVNPDQGELARDWQLMFICVPVIFLVEMLFGTWSWQKLRSLNRQKFGKPLAGLFITAFFASHLIYIWADANFYRPITMQRSNLPLSYPMTARRFLEKHGLLDAQEFQNKLTQTGSPEAVSVEYPLNKLSFADKGAGYNLLVIAVDGLRADDLKQDLPQLAAFGNDNLEFTQHYSSGNNLDNGLFGLFYGISPSYLEGILAGRKPSALISALSQQNYQFGLFSSDGFSAPLYRQALLTDFSLPAPIRQSDAATTKQWQQWLSTQTTQSPWFSYVNLNGTRSALADASQHKPEDYMVRYQRAAEGVDGQIAAILNTLKQRGELDKTVVVITASHGIEFNDSGKGDWGFGTNYSRYQLQVPLIIHWPGTPAQTINKLTSHEDVMATLMQRLLHVDTRAVDYTQGEDLFAPTRKHNWLALGDSSELVIVTPKETVILDKNGRYRTYDADNEEMKGEKPQLALLLQVLTDVKRFIAN
>NZ_AP017469.1|WP_096388013.1|2801747_2802188_-|NUDIX-domain-containing-protein
MSKFQPYLAVYIIVRQQQRILLLQRKNTGFDDGKWSLPAGHVEEGESALTAAIREAEEEIGIVIPSSALNLVYTLHRKSDERTYIDLWFEAERFDGVPINQEPDKCAGLMWSDVQNLPENTQEFVRMALNDMQASRYGSIGLDMVC
>NZ_AP017469.1|WP_096388015.1|2802636_2803785_+|membrane-associated-sensor-domain-containing-protein
MIELTEKNAQSRTLTLHNRLKVAEIRAVKMNVSWLLSVQIAFVLFVFCREYFYVSHNIPAAPVISTVLEHALIVIMAILCGYMIVLRFTRVLEKQFKPAMLVITLSIGVIWCFILSLLFYSEFGHLIFAISTLLMLSSLIALYPSSHHLFFATTPIWAIIVAHAMFFSGTLSLVYLAGYLVFAVLFETGRRLLRRWFVLAVMREHQNVRLANKLTLMSQQDPLTALANRRYFDHALQRAIEAATKTAQPLSIILIDVDYFKKYNDRYGHQAGDSCLTQLAKCFQQTVRNAQDLVGRYGGEEFIILLSDQDKHAAEKVAERLKISVFALALPHDQSDVSPYVSLSQGIAQWRNGMDAKTLIENADRALYLAKQQGRNTARLAP

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Crispr_ID: NZ_AP017469_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_5

2852401-2852728

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CRT

5 spacers

cas6f,cas7f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_AP017469_5

>merge|NZ_AP017469|5|2852401-2852728|CRISPRCasFinder,CRT
AATTTTGGCTGCCTGTACGGCAGTGAACGGCGTACACGGCATGCGAGCTGTGATTGTTTGTTTCTAAGCTGCCTGTACGGCAGTTAACATAAATCATAAGATGTATAATTGATTGAAATATTTCTAAGCTGCCTGTACGGCAGTTAACTCCACGCTTATCTCTGCATTAATTCAGCGAGATTTCTAAGCTGCCTGTACGGCAGTTAACAAAAATGGGAGAAAGAAGCAATGTTAAAGAGTTTTCTAAGCTGCCTGTACGGCAGTTAACTGCGCCAGAAGGCGAGTCGCCAGAGGCGGAGTTTTCTAAGCTGCCTGTACGGCAGTTAAC

>NZ_AP017469|5|5|2852401-2852728|CRISPRCasFinder
AATTTTGGCTGCCTGTACGGCAGTGAAC	GGCGTACACGGCATGCGAGCTGTGATTGTTTG
TTTCTAAGCTGCCTGTACGGCAGTTAAC	ATAAATCATAAGATGTATAATTGATTGAAATA
TTTCTAAGCTGCCTGTACGGCAGTTAAC	TCCACGCTTATCTCTGCATTAATTCAGCGAGA
TTTCTAAGCTGCCTGTACGGCAGTTAAC	AAAAATGGGAGAAAGAAGCAATGTTAAAGAGT
TTTCTAAGCTGCCTGTACGGCAGTTAAC	TGCGCCAGAAGGCGAGTCGCCAGAGGCGGAGT
TTTCTAAGCTGCCTGTACGGCAGTTAAC

>NZ_AP017469|5|3|2852401-2852728|CRT
AATTTTGGCTGCCTGTACGGCAGTGAAC	GGCGTACACGGCATGCGAGCTGTGATTGTTTG
TTTCTAAGCTGCCTGTACGGCAGTTAAC	ATAAATCATAAGATGTATAATTGATTGAAATA
TTTCTAAGCTGCCTGTACGGCAGTTAAC	TCCACGCTTATCTCTGCATTAATTCAGCGAGA
TTTCTAAGCTGCCTGTACGGCAGTTAAC	AAAAATGGGAGAAAGAAGCAATGTTAAAGAGT
TTTCTAAGCTGCCTGTACGGCAGTTAAC	TGCGCCAGAAGGCGAGTCGCCAGAGGCGGAGT
TTTCTAAGCTGCCTGTACGGCAGTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_096388025.1\|2845369_2846950_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173877
NZ_AP017469.1\|WP_096388033.1\|2853501_2854500_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_AP017469.1\|WP_043494043.1\|2849684_2850401_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224049
NZ_AP017469.1\|WP_043494060.1\|2855435_2856752_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_AP017469.1\|WP_025798031.1\|2843536_2844667_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_AP017469.1\|WP_040044673.1\|2863928_2864915_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_AP017469.1\|WP_043494046.1\|2851347_2851926_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_AP017469.1\|WP_096388035.1\|2856776_2860019_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NZ_AP017469.1\|WP_043494058.1\|2854510_2855443_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_AP017469.1\|WP_096388027.1\|2848029_2848854_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_AP017469.1\|WP_025798000.1\|2863170_2863413_-\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|182985
NZ_AP017469.1\|WP_043494066.1\|2863409_2863892_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_AP017469.1\|WP_096388037.1\|2860015_2861047_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_AP017469.1\|WP_096388031.1\|2852937_2853492_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_AP017469.1\|WP_025798033.1\|2841183_2843469_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_AP017469.1\|WP_025798019.1\|2850487_2851198_-\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|198414
NZ_AP017469.1\|WP_172863846.1\|2848816_2849698_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_AP017469.1\|WP_025798025.1\|2846986_2848030_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_AP017469.1\|WP_025798003.1\|2862715_2863168_-\|molybdopterin-synthase-catalytic-subunit-MoaE	unknown	unknown	gnl\|CDD\|182642
NZ_AP017469.1\|WP_080949491.1\|2844671_2845013_+\|2Fe-2S-ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182668

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_096388025.1\|2845369_2846950_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173877	cd08512, PBP2_NikA_DppA_OppA_like_7, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	7.13387e-177
NZ_AP017469.1\|WP_096388033.1\|2853501_2854500_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_AP017469.1\|WP_043494043.1\|2849684_2850401_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.25406e-103
NZ_AP017469.1\|WP_043494060.1\|2855435_2856752_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.47784e-151
NZ_AP017469.1\|WP_025798031.1\|2843536_2844667_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_AP017469.1\|WP_040044673.1\|2863928_2864915_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_AP017469.1\|WP_043494046.1\|2851347_2851926_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.83752e-33
NZ_AP017469.1\|WP_096388035.1\|2856776_2860019_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_AP017469.1\|WP_043494058.1\|2854510_2855443_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.86258e-135
NZ_AP017469.1\|WP_096388027.1\|2848029_2848854_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.4421e-93
NZ_AP017469.1\|WP_025798000.1\|2863170_2863413_-\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|182985	PRK11130, moaD, molybdopterin synthase small subunit; Provisional.	2.45972e-47
NZ_AP017469.1\|WP_043494066.1\|2863409_2863892_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	9.30592e-103
NZ_AP017469.1\|WP_096388037.1\|2860015_2861047_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_AP017469.1\|WP_096388031.1\|2852937_2853492_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.65241e-97
NZ_AP017469.1\|WP_025798033.1\|2841183_2843469_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_AP017469.1\|WP_025798019.1\|2850487_2851198_-\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	5.32133e-77
NZ_AP017469.1\|WP_172863846.1\|2848816_2849698_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.43184e-99
NZ_AP017469.1\|WP_025798025.1\|2846986_2848030_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.60589e-102
NZ_AP017469.1\|WP_025798003.1\|2862715_2863168_-\|molybdopterin-synthase-catalytic-subunit-MoaE	gnl\|CDD\|182642	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE.	3.26556e-115
NZ_AP017469.1\|WP_080949491.1\|2844671_2845013_+\|2Fe-2S-ferredoxin-like-protein	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	1.89863e-41

>NZ_AP017469.1|WP_043494046.1|2851347_2851926_-|flavodoxin-family-protein
MTALAVVFHSGYGHTAKAAEAVAAGAQQIDGVSVEVLAIDSEGNLPEGGWHLLAQADAIIFGSPTYMGGPSWQFKKFADASSKPWFSQEWKDKVFAGFTNSASMNGDKLGTLDYMFHLSQQHGGVWVGMGMLPSNTKAANRNDVNYIAGFSGLMTVSPSDASPDEAPLPGDLETARKFGERVAHVTKRWSSV
>NZ_AP017469.1|WP_025798019.1|2850487_2851198_-|Bax-inhibitor-1/YccA-family-protein
MDRYPRDNGSIVERANSGLQAYMAQVYGWMTCGLLLTSIVAWYAAHTPAVLNFIFSSKITFFGLIIVQLGLVFVLSGMVQKLSAAAATSLFMLYSALTGLTLASIFIVYTYSSIASTFVVTAGMFGAMSLYGYTTKRDLSGIGSMMFMGLIGIILASLVNIWLKSPALTWVITYAGVIIFVGLTAYDTQKLKAMGEQLNPEDKDNFRKYSILGALTLYLDFINLFLMLLRIFGNRR
>NZ_AP017469.1|WP_043494043.1|2849684_2850401_+|ABC-transporter-ATP-binding-protein
MPLINIQDLHVSFSDGRQRKHVVKSAHFQVNEGETFSLIGASGCGKSTILRVIAGLQREWQGQIDLLGSPLRPQKRLNGEIRRNVQMVFQDPYASLHPQHRLYRSLAEPLQIHREPNVEQRVAEALQQVGLPADAAQRFPHQISGGQRQRVAIARALLLRPKILLLDEPTSALDMSVQAEILNLLNLLKRLHSMTYLLVSHDADVIAHMSQRAALMEDGKIMREFNRAALARGEHRFD
>NZ_AP017469.1|WP_172863846.1|2848816_2849698_+|ABC-transporter-ATP-binding-protein
MACVIFWSPIMTDISQNHSLIEAVDLSVHFGQACVVNQLNFSLGHERLALVGESGSGKSMTARALMGLIRQPGKVRATTLRFEQQNLLAQKPKQWSALRGNSIAMVLQDPRYALNPVHTIYRQIEEALTLHQRLSRRQRDELVLHTAESVGLPAHSLKRYPGELSGGLGQRAMIAIALINNPKVLIADEPTSALDARLRHQILSLLVEQCEQRQMGLLLISHDLPLVAEHCDRVMVMYQGQCVDELRAAELPQATHPYTRTLWTCRPNAQTYGSLLPVLDRSRTFEGAPRAAD
>NZ_AP017469.1|WP_096388027.1|2848029_2848854_+|ABC-transporter-permease
MNLLHKILRSPAASCGLVIILLLILCALFAPWLAGQDPNWQNAAARLLPPEPGHWLGTDAYGRDMLARLLYGTRPMLGMVLLVTAITLPLGLLIGILSGYYGGWTERVLMRFTDVVMSMPRLILAFAFVAMLGPGLINGALALALTTWPAYARQARTEIQKLRNSDYLSAAEMLGIRGFRLMWGHILPLCLPSAIVRLALDLAGIILAAAGLGFLGLGARPPMAEWGAMIADGMQVIFDQWWIAAIPGAAILLSSLAFNLLGDGLRDILESDHD
>NZ_AP017469.1|WP_025798025.1|2846986_2848030_+|ABC-transporter-permease
MAADFTPENNFRRHLQTLLQGLLTLALTLFGLLLITFLLSALSPVDRVLQIVGDHASVSTYNQVRHQLGLDQPLPVQFWHYLIQLGHGDLGTASATGQPVLQDLLTVFPATLELATLALIIGATLGVLLGVLCARYAGTAWDLTIRTLTLLGNSVPIFWLGLLMLLLFYARLQWSAGPGRLDDIYQYSVEAKTGFVLIDTLLSGDSGAFLNAINHLTLPVLLLAYFSMASITRLTRSACLGEMKKEYVTLARAKGANETTILIRHVLPNIRGTLFTVIALAYTGMLEGAVLTETVFSWPGIGRYLTTALFAGDTTAVMGGTLVIGVCFVLINNLTDLLVRLTDPRVH
>NZ_AP017469.1|WP_096388025.1|2845369_2846950_+|ABC-transporter-substrate-binding-protein
MKAKLLPVLIFASLSAGTLSANAWAATPPKTLVVVQTLDDIASLDPAESNELSSIQTVPSLYQRLIQANRDNPAKIDAVLAESWQGDAANKTLTVKLRPNAKFSSGNPVRPEDVIFSYTRAVALNKSPAFILNVLGWEADNVASHLKKIDDHTLQLTWTANVSPDVALNILSTPIASIVDEKTVTPNGKKGDFGNEWLKMHSAGSGPFKMRVYQPHQAIVLDANPLSNDAPKIANIIIKNVPDPASRRLLIQQGDADIARGLGADQTSALQNQAGINVMSIPSAEQNYLAFNTGNTANPLLANPALWEAARYLVDYKGITQDLLKGQYFVHQSFLPVGFNGALENNPFSFDPAKAKAILEKAGIKNAAFTLDVENKAPFITVAQSIQASFAQGGVKVDLLPAAGSQVYARVRARQHQAAIRMWLPDYFDAHSNASAFAYNDNKGSTVAWLNGWKIPELSQQTLAAVAEADSAKRLDMYTKMQQELQRSSPYVFIDQAKTQVVLRDNVKGYQQGLNADMVYYDRVTK
>NZ_AP017469.1|WP_080949491.1|2844671_2845013_+|2Fe-2S-ferredoxin-like-protein
MSFSLYQDSTLAADDAASIEAENASAEPLTPTITLALSGAKLAFTHGKASLLEALEHHNVQVEYQCRSGYCGSCRCKMTKGRVVYRQQPLAFINEGEILPCCCHPDGDIEVEL
>NZ_AP017469.1|WP_025798031.1|2843536_2844667_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQNKNDQLLEPMFFGQPVNVARYDQQKHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEEILKRAKDISGYYDDLIEMTGYWHLLGEGTHTVNGKTVNVNLRTLKKQLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHILNLMRSGQDDPEMAEIAVECEQQCYDLFVLAAQQEKEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLGLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVGQIDSEVNADDLSDFEL
>NZ_AP017469.1|WP_025798033.1|2841183_2843469_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQSLLVTKRDGSKERINLDKIHRVLDWAAEGLSNVSVSQVELRSHIQFYDGIRTADIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPKLYDHVVKLVEMGKYDKHLLEDYTTEEFAQMDEFIDHWRDMNFSYAAVKQLEGKYLVQNRVSGEIYESAQFLYILVAACLFSNYPRETRLSYVKRFYDAVSTFKISLPTPIMAGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPLWHLEVESLLVLKNNRGVEGNRVRHMDYGVQLNRLMYQRLIKGGDITLFSPSDVPGLYDAFFADQDEFERLYMQYEADDSIRKQKVKAVELFSLMMQERASTGRIYIQHVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLSDVNDENGEIALCTLSAFNLGVIESLDDLEELAVLAVRALDALLDYQDYPILAAKRGAMGRRTLGIGVINYAYYLAKNGVRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAQGVLPIDTYKKDLDTICNEPLHYDWETLRREIKEHGLRNSTLSALMPSETSSQISNATNGIEPPRGHISIKASKDGILRQVVPEYERLKNAYELLWEMPNNDGYLQLVGLMQKFIDQSISANTNYDPSRFPSGKVPMKQLLKDLLTAYKFGAKTLYYQNTRDGAEDVQDDLQAVAEDDGCESGACKI
>NZ_AP017469.1|WP_096388031.1|2852937_2853492_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNFYQDIRVLEDPEFSEAMLMAALFAKLHRALGAYGEGDIGVSFPQAAKTLGYTIRLHGSQQALSAIAATPWLKGLRDYTQCSDILAVPEKVAYRTVSRVQVKSSAERLRRRSVKKGWLTEEQARLQILDVNEQRTSLPFVVLKSLSTGQMFHLFIRQGELQTQPTAGKFSSYGLSATATVPWF
>NZ_AP017469.1|WP_096388033.1|2853501_2854500_-|type-I-F-CRISPR-associated-protein-Csy3
MAKTSVIKTASVLAFERKLANSDAVMYSGNWHGDVWQPVRIQEKAVRGTISNRLKNAIASDPTKLDAEIQKANLQRVDVAALPMDADTLKVMFTLRVLGNLSTPSVCNDQEYQAALQEVIEGYIAEHGFAELAARYAENLANGRFLWRNRIGAEAIEVHISSGEQHWKFDAQNYSLREFSQPKGDLRALAQVIETGLRGESFALLTVNAFVHLGAGQEIFPSQELVLDSNSKKSKVLYQVSDVAAMHSQKVGNALRTIDTWHPMVESLGAIAVEPYGSVTSRGVACRQPKEKMDFYTLLDKWVTKGEKPATEQQHYVMAVLIRGGVFGEKGE
>NZ_AP017469.1|WP_043494058.1|2854510_2855443_-|type-I-F-CRISPR-associated-protein-Csy2
MSNIIILPWIMVENANAVAGLTWGFPSITHFLGYTHALSRKLQISHGLTLEGCGVICHRHQTHAYSSGRDYQFALTRNPLTKEAKTASFNEEGRMHMTVSLVIECHGEIANGDVGMQALAEHLQNLCQTQKLAGGTITQLREVRVCSAGNLSANLYSLMPGFALYDRSLWLDEHFQALKQQNPDVEMMDAWLDFAALKMAAKKNEDQEDSATWEYLKKPRPGYLVPLMIGWQRISPLYEPGTVINARDNETPFCFAEPVYGIGEWRGVHRIKEPDELFWRYHITDTGYYCRGQSLPDDIMPDDSHYSDEF
>NZ_AP017469.1|WP_043494060.1|2855435_2856752_-|type-I-F-CRISPR-associated-protein-Csy1
MSYQRLAVFIEDYIAGRRQAKLDAFDKEMTKRQAAGEDESTLLQERREVALRYETRNWLTDAVNRIGQISSATHVAKFAHGDSKSSSVISEATENEGYLSTATILNQCIDFTGNAAVFDVANLLKAEVEGDSLLACLQRGDSSVLAELSEDDEQLAFWMTGFTSVLIAKPPASHKLAKQIYIPVEGGYHLLGPLFSSSLAQILHNKLIALRFSEESKEIRAAYKAGTWHPKPLVKFPNLAVMDFCSAKPQTRSLLNVARNGRVWLLSSASPQWKTQDKPPVALKNLFGRGPYERATHTLRRRLIQLLVSAGESNNHAIRQQRDRYIDELIDLLFNIAADLQRREFEGWTADENCQLKPHQQLWLDPWRAKKDEAFFNEREKGDWQDAVANDFAQWLNSHLWCDKLKVGETERREWQTQPLFKRRLHEMEQAIRRCRNE
>NZ_AP017469.1|WP_096388035.1|2856776_2860019_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCSKNALVASRRILDQFAERKGDGTWQTAITLDGLNTLRRLLRKTARRNTAVACHWIKSGGQTELLWIVGNLRRFNAQGAVPTNRTMRDVLKSQDENQWHSAEAISLLAGIAGLFHDFGKANALFQGVLQGKSGHRYQPFRHEWISVRLFQAFIGTQTDKQWLDKLGRLAPQDENEWLASLQKDSKEKSDSPLVNLPPLARVVAWLIISHHRLPQYLGKNEPELSSSKTWLENQLNVYWSALNHEKSDWRESDFDKVWTFPKGTPLRSQTWRNKANQLAKRAAHAVSLPDFGSLDQTFTVHLARLALMLADHHYSSQKPMPGWQDETYHAWANTEEGKLKQKLDEHVVGVSHHAFLLGRTFAALRRQLPAISRHKGFRERAKGARYQWQNKAWDKAASLRECSQSQGFFGINMASTGCGKTFANARIMYALAREDEGCRFTVALGLRTLTLQTGEALRARLGLGEDDLAVLVGSRAVRELHNEPDDDNNSASGKDLFESHQYVHYDGVPNTGPLRQWLETDTKLRQLVDAPVLVATIDHLMPATEGVRGGKQIAPMLRLLTSDLVLDEPDDFEIEDQHALCRLVNWAGMLGGRVLLSSATLPPAFVQVLFSAYCTGRQAYQQACGEPGLPLNVCCAWFDEDDACTGEFGRPKDFYDAHCNFAGQRAKRLPVKPVLRRAEIVTVLPPTSKTEVVIDAITKTLHDNMFALHAKHHEEHADKSVSLGLVRMANINPLVATAKALMAMSSPDGFCVHYCVYHSQHPLVMRSYMEKRLDAAFSRSGENNSLWDKPEIRRVVEQSIAKHHLFVVLATSVVEVGRDWDADWGIIEPSSMRSLIQFAGRIQRHRQKLPQSPNLLILNKNVRAYRQKTPAMCQPGFETKRFQLVSHDLNEILQPEQYQHINAVPRILDMLSKPVEGQCYTSLVDLEHGRSQLELMGNERKYPVAVHWWRLPVNWNGELQRRTPFRQSQPERQYFLRMEDEFDEPKFFFRDEGSAAGWKAAGEFTYQQLNMAEGVSAWMAMDYEQVLQSVADAREIALANVCERYGEINLRVSKEEDTEAWLWNPVLGVFRPL
>NZ_AP017469.1|WP_096388037.1|2860015_2861047_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MCWVVFLHYLQRWNNDVNSNDFSPSDLKTILHSKRSNIYYLQYCRVLVNGGRVEYVTDEGRESLYWNIPIANTTVVMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANEVEIDVSWLAPQSEYRPTEYLQNWVSFWFDDDKRLAAAVRFQRVRTEQIRRHWLGSLMQREERFRVDESRLQALLQRYEQNLEKCANHTDLMVQEAVMTKALYKLASDSTQYGEFTRAKRGGGTDMANRFLDHGNYLAYGLAAVAAWVTGLPHGLAVLHGKTRRGGLVFDIADLIKDALVLPQAFIAAIAGDDEQEFRQRCLTSFQRAEVLGTMIETLQDTAQQLGQSKP
>NZ_AP017469.1|WP_025798003.1|2862715_2863168_-|molybdopterin-synthase-catalytic-subunit-MoaE
MENTRIRVGLDNFSVGDEYQWLSQCEDDGAVVTFTGKVRNHNLGDNVSALTLEHYPGMTEKALNEIVAEARSRWPLQRISLIHRIGAMYPGDEIVFVGVTSAHRSMAFDAAEFIMDYLKTRAPFWKREATEQGDRWVDARDSDQQAAKRW
>NZ_AP017469.1|WP_025798000.1|2863170_2863413_-|molybdopterin-synthase-sulfur-carrier-subunit
MIKVLFFAQVRELIETDELQCELYPTVEALRAALAERGDKWALALETGKLLAAVNQTLVEFTHPLQVGDEVAFFPPVTGG
>NZ_AP017469.1|WP_043494066.1|2863409_2863892_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSQLTHINAAGEAHMVDVSAKAETVREARAEAYVEMKPETLAMIVEGKHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLTKVEVQLSAEVDTSRVRIESCCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKADAS
>NZ_AP017469.1|WP_040044673.1|2863928_2864915_-|GTP-3',8-cyclase-MoaA
MLQLTDAFERKFYYLRLSITDVCNFRCTYCLPDGYKPNGHANKSFLSLDEIRRVSRAFAELGTEKVRLTGGEPSLRRDFVDIISAVRENPSIRTLAVTTNGYRMARDIADWRDAGLTAVNVSVDSLDARQFHAITGEDKLKQVMQGIDAAFDAGFEKVKVNTVLMRDVNDRSLNGFLNWIKTRPIQMRFIELMETGDGGNLFRKHHVSGEVIRDQLLALGWQRQERSRSDGPAQVFSHPDYLGEVGLIMPYEKDFCASCNRLRVSAIGNLHLCLFGESGIPLRDLLAGDEHLDELKMRIQGGLRHKKQTHFLHDGNIGHTQNLSFIGG

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Crispr_ID: NZ_AP017469_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_6

2861168-2862576

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAA	PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT

23 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_AP017469_6

>merge|NZ_AP017469|6|2861168-2862576|PILER-CR,CRISPRCasFinder,CRT
TTTGTAAGCTGCCTGTACGGCAGTGAACCTTGGAAAAAACAAGTAAATGCATCTATGGATTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCTATCGCGTAGGTTTCGCGCTTTTGATACTTTCTAAGCTGCCTGTACGGCAGTGAACCGACACAGGGCGTGGCGCTGGATTCGATGCTCTTTCTAAGCTGCCTGTACGGCAGTGAACTCTTCAGCTGAAAAATTCCCCTTCCACTCATGTTTCTAAGCTGCCTGTACGGCAGTGAACTTTTCGCATTAAATACAATCCAATCACTGAAATTTCTAAGCTGCCTGTACGGCAGTGAACTTTGCACGGAGATGCGACGCAGTGGAACGGAATTTCTAAGCTGCCTGTACGGCAGTGAACTCGCGAGAGTTGATTTCGATGCCGTATAGGACTTTCTAAGCTGCCTGTACGGCAGTGAACGATATCCATTCACGTGAAACATCGGGATCAGTTTTCTAAGCTGCCTGTACGGCAGTGAACGGCACAGCGTCTACAGAGTATTTTTCCCTCACTTTCTAAGCTGCCTGTACGGCAGTGAACTTGAGCGGGTTTGCAAGCATTTGCATCTGACCTTTCTAAGCTGCCTGTACGGCAGTGAACGTGTGCAGTCAACGTTCAGGCCGACTCATATCTTTCTAAGCTGCCTGTACGGCAGTGAACATCATATCCTGATTAAACACCATAACCCGCAATTTCTAAGCTGCCTGTACGGCAGTGAACTTAACGCAGAGCCAGTAATTAACGGCAGTCAATTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCCCGCCACACCCTCATGGGCTGAGCCATTTCTAAGCTGCCTGTACGGCAGTGAACAGGTTTGTCTCGGGATGACGGAACTAATACATTTTCTAAGCTGCCTGTACGGCAGTGAACCGTTAGTGCCAGAATTTTTAAAAACAGCAGATTTTCTAAGCTGCCTGTACGGCAGTGAACATATCAGTAAAAAATCCACGCTGGCCCCGAAGTTTCTAAGCTGCCTGTACGGCAGTGAACCCAGTGCATAAAAAAGCCCCTGCATATATTGATTTCTAAGCTGCCTGTACGGCAGTGAACTTAAACTGTTGCTGCTATAATGCAAGCCAAAATTTCTAAGCTGCCTGTACGGCAGTGAACTGATTTTTATGTTTACTGTTTATTGCAATATTTTTCTAAGCTGCCTGTACGGCAGTGAACTCTGATTTTTCGTTTAGATGCTCCATGATATTTTTCTAAGCTGCCTGTACGGCAGTGAACGTTTAATGCCTGGATAGCCATCTGCTCATGGTTTTCTAAGCTGCCTGTACGGCAGTGAACTGAATCATTTAAAATTCCTAATGGATGGGTTGATTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_AP017469|6|3|2861168-2862576|PILER-CR
TTTGTAAGCTGCCTGTACGGCAGTGAAC	CTTGGAAAAAACAAGTAAATGCATCTATGGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCTATCGCGTAGGTTTCGCGCTTTTGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGACACAGGGCGTGGCGCTGGATTCGATGCTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTTCAGCTGAAAAATTCCCCTTCCACTCATG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTTCGCATTAAATACAATCCAATCACTGAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGCACGGAGATGCGACGCAGTGGAACGGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGCGAGAGTTGATTTCGATGCCGTATAGGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATATCCATTCACGTGAAACATCGGGATCAGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCACAGCGTCTACAGAGTATTTTTCCCTCAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGAGCGGGTTTGCAAGCATTTGCATCTGACC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTGTGCAGTCAACGTTCAGGCCGACTCATATC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCATATCCTGATTAAACACCATAACCCGCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTAACGCAGAGCCAGTAATTAACGGCAGTCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCCCGCCACACCCTCATGGGCTGAGCCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGGTTTGTCTCGGGATGACGGAACTAATACAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTTAGTGCCAGAATTTTTAAAAACAGCAGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATATCAGTAAAAAATCCACGCTGGCCCCGAAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCAGTGCATAAAAAAGCCCCTGCATATATTGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTAAACTGTTGCTGCTATAATGCAAGCCAAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGATTTTTATGTTTACTGTTTATTGCAATATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTGATTTTTCGTTTAGATGCTCCATGATATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTTAATGCCTGGATAGCCATCTGCTCATGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAATCATTTAAAATTCCTAATGGATGGGTTGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_AP017469|6|6|2861168-2862576|CRISPRCasFinder
TTTGTAAGCTGCCTGTACGGCAGTGAAC	CTTGGAAAAAACAAGTAAATGCATCTATGGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCTATCGCGTAGGTTTCGCGCTTTTGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGACACAGGGCGTGGCGCTGGATTCGATGCTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTTCAGCTGAAAAATTCCCCTTCCACTCATG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTTCGCATTAAATACAATCCAATCACTGAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGCACGGAGATGCGACGCAGTGGAACGGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGCGAGAGTTGATTTCGATGCCGTATAGGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATATCCATTCACGTGAAACATCGGGATCAGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCACAGCGTCTACAGAGTATTTTTCCCTCAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGAGCGGGTTTGCAAGCATTTGCATCTGACC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTGTGCAGTCAACGTTCAGGCCGACTCATATC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCATATCCTGATTAAACACCATAACCCGCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTAACGCAGAGCCAGTAATTAACGGCAGTCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCCCGCCACACCCTCATGGGCTGAGCCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGGTTTGTCTCGGGATGACGGAACTAATACAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTTAGTGCCAGAATTTTTAAAAACAGCAGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATATCAGTAAAAAATCCACGCTGGCCCCGAAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCAGTGCATAAAAAAGCCCCTGCATATATTGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTAAACTGTTGCTGCTATAATGCAAGCCAAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGATTTTTATGTTTACTGTTTATTGCAATATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTGATTTTTCGTTTAGATGCTCCATGATATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTTAATGCCTGGATAGCCATCTGCTCATGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAATCATTTAAAATTCCTAATGGATGGGTTGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_AP017469|6|4|2861168-2862576|CRT
TTTGTAAGCTGCCTGTACGGCAGTGAAC	CTTGGAAAAAACAAGTAAATGCATCTATGGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCTATCGCGTAGGTTTCGCGCTTTTGATAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGACACAGGGCGTGGCGCTGGATTCGATGCTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTTCAGCTGAAAAATTCCCCTTCCACTCATG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTTCGCATTAAATACAATCCAATCACTGAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTGCACGGAGATGCGACGCAGTGGAACGGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCGCGAGAGTTGATTTCGATGCCGTATAGGAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GATATCCATTCACGTGAAACATCGGGATCAGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCACAGCGTCTACAGAGTATTTTTCCCTCAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGAGCGGGTTTGCAAGCATTTGCATCTGACC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTGTGCAGTCAACGTTCAGGCCGACTCATATC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCATATCCTGATTAAACACCATAACCCGCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTAACGCAGAGCCAGTAATTAACGGCAGTCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCCCGCCACACCCTCATGGGCTGAGCCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AGGTTTGTCTCGGGATGACGGAACTAATACAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTTAGTGCCAGAATTTTTAAAAACAGCAGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATATCAGTAAAAAATCCACGCTGGCCCCGAAG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCAGTGCATAAAAAAGCCCCTGCATATATTGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTAAACTGTTGCTGCTATAATGCAAGCCAAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGATTTTTATGTTTACTGTTTATTGCAATATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTGATTTTTCGTTTAGATGCTCCATGATATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTTAATGCCTGGATAGCCATCTGCTCATGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAATCATTTAAAATTCCTAATGGATGGGTTGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_096388041.1\|2866308_2867502_-\|nicotinamide-mononucleotide-deamidase-related-protein-YfaY	unknown	unknown	gnl\|CDD\|179629
NZ_AP017469.1\|WP_096388035.1\|2856776_2860019_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NZ_AP017469.1\|WP_043494046.1\|2851347_2851926_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_AP017469.1\|WP_043494060.1\|2855435_2856752_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_AP017469.1\|WP_096388043.1\|2869102_2870128_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183400
NZ_AP017469.1\|WP_040044673.1\|2863928_2864915_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_AP017469.1\|WP_025797984.1\|2871144_2872578_+\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_AP017469.1\|WP_025797991.1\|2867710_2868922_+\|tyrosine-transporter-TyrP	unknown	unknown	gnl\|CDD\|185086
NZ_AP017469.1\|WP_043494058.1\|2854510_2855443_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_AP017469.1\|WP_096388033.1\|2853501_2854500_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_AP017469.1\|WP_025797986.1\|2870210_2870756_-\|porin	unknown	unknown	gnl\|CDD\|284781
NZ_AP017469.1\|WP_025798000.1\|2863170_2863413_-\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|182985
NZ_AP017469.1\|WP_043494043.1\|2849684_2850401_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224049
NZ_AP017469.1\|WP_043494066.1\|2863409_2863892_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_AP017469.1\|WP_096388037.1\|2860015_2861047_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_AP017469.1\|WP_096388039.1\|2865310_2866219_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_AP017469.1\|WP_096388031.1\|2852937_2853492_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_AP017469.1\|WP_025798019.1\|2850487_2851198_-\|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl\|CDD\|198414
NZ_AP017469.1\|WP_172863846.1\|2848816_2849698_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_AP017469.1\|WP_025798003.1\|2862715_2863168_-\|molybdopterin-synthase-catalytic-subunit-MoaE	unknown	unknown	gnl\|CDD\|182642

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_096388041.1\|2866308_2867502_-\|nicotinamide-mononucleotide-deamidase-related-protein-YfaY	gnl\|CDD\|179629	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY.	0
NZ_AP017469.1\|WP_096388035.1\|2856776_2860019_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_AP017469.1\|WP_043494046.1\|2851347_2851926_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.83752e-33
NZ_AP017469.1\|WP_043494060.1\|2855435_2856752_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.47784e-151
NZ_AP017469.1\|WP_096388043.1\|2869102_2870128_+\|tryptophan--tRNA-ligase	gnl\|CDD\|183400	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.	0
NZ_AP017469.1\|WP_040044673.1\|2863928_2864915_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_AP017469.1\|WP_025797984.1\|2871144_2872578_+\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_AP017469.1\|WP_025797991.1\|2867710_2868922_+\|tyrosine-transporter-TyrP	gnl\|CDD\|185086	PRK15132, PRK15132, tyrosine transporter TyrP; Provisional.	0
NZ_AP017469.1\|WP_043494058.1\|2854510_2855443_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.86258e-135
NZ_AP017469.1\|WP_096388033.1\|2853501_2854500_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_AP017469.1\|WP_025797986.1\|2870210_2870756_-\|porin	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	1.42052e-67
NZ_AP017469.1\|WP_025798000.1\|2863170_2863413_-\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|182985	PRK11130, moaD, molybdopterin synthase small subunit; Provisional.	2.45972e-47
NZ_AP017469.1\|WP_043494043.1\|2849684_2850401_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224049	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.25406e-103
NZ_AP017469.1\|WP_043494066.1\|2863409_2863892_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	9.30592e-103
NZ_AP017469.1\|WP_096388037.1\|2860015_2861047_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_AP017469.1\|WP_096388039.1\|2865310_2866219_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	3.68334e-119
NZ_AP017469.1\|WP_096388031.1\|2852937_2853492_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.65241e-97
NZ_AP017469.1\|WP_025798019.1\|2850487_2851198_-\|Bax-inhibitor-1/YccA-family-protein	gnl\|CDD\|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	5.32133e-77
NZ_AP017469.1\|WP_172863846.1\|2848816_2849698_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.43184e-99
NZ_AP017469.1\|WP_025798003.1\|2862715_2863168_-\|molybdopterin-synthase-catalytic-subunit-MoaE	gnl\|CDD\|182642	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE.	3.26556e-115

>NZ_AP017469.1|WP_096388037.1|2860015_2861047_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MCWVVFLHYLQRWNNDVNSNDFSPSDLKTILHSKRSNIYYLQYCRVLVNGGRVEYVTDEGRESLYWNIPIANTTVVMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANEVEIDVSWLAPQSEYRPTEYLQNWVSFWFDDDKRLAAAVRFQRVRTEQIRRHWLGSLMQREERFRVDESRLQALLQRYEQNLEKCANHTDLMVQEAVMTKALYKLASDSTQYGEFTRAKRGGGTDMANRFLDHGNYLAYGLAAVAAWVTGLPHGLAVLHGKTRRGGLVFDIADLIKDALVLPQAFIAAIAGDDEQEFRQRCLTSFQRAEVLGTMIETLQDTAQQLGQSKP
>NZ_AP017469.1|WP_096388035.1|2856776_2860019_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCSKNALVASRRILDQFAERKGDGTWQTAITLDGLNTLRRLLRKTARRNTAVACHWIKSGGQTELLWIVGNLRRFNAQGAVPTNRTMRDVLKSQDENQWHSAEAISLLAGIAGLFHDFGKANALFQGVLQGKSGHRYQPFRHEWISVRLFQAFIGTQTDKQWLDKLGRLAPQDENEWLASLQKDSKEKSDSPLVNLPPLARVVAWLIISHHRLPQYLGKNEPELSSSKTWLENQLNVYWSALNHEKSDWRESDFDKVWTFPKGTPLRSQTWRNKANQLAKRAAHAVSLPDFGSLDQTFTVHLARLALMLADHHYSSQKPMPGWQDETYHAWANTEEGKLKQKLDEHVVGVSHHAFLLGRTFAALRRQLPAISRHKGFRERAKGARYQWQNKAWDKAASLRECSQSQGFFGINMASTGCGKTFANARIMYALAREDEGCRFTVALGLRTLTLQTGEALRARLGLGEDDLAVLVGSRAVRELHNEPDDDNNSASGKDLFESHQYVHYDGVPNTGPLRQWLETDTKLRQLVDAPVLVATIDHLMPATEGVRGGKQIAPMLRLLTSDLVLDEPDDFEIEDQHALCRLVNWAGMLGGRVLLSSATLPPAFVQVLFSAYCTGRQAYQQACGEPGLPLNVCCAWFDEDDACTGEFGRPKDFYDAHCNFAGQRAKRLPVKPVLRRAEIVTVLPPTSKTEVVIDAITKTLHDNMFALHAKHHEEHADKSVSLGLVRMANINPLVATAKALMAMSSPDGFCVHYCVYHSQHPLVMRSYMEKRLDAAFSRSGENNSLWDKPEIRRVVEQSIAKHHLFVVLATSVVEVGRDWDADWGIIEPSSMRSLIQFAGRIQRHRQKLPQSPNLLILNKNVRAYRQKTPAMCQPGFETKRFQLVSHDLNEILQPEQYQHINAVPRILDMLSKPVEGQCYTSLVDLEHGRSQLELMGNERKYPVAVHWWRLPVNWNGELQRRTPFRQSQPERQYFLRMEDEFDEPKFFFRDEGSAAGWKAAGEFTYQQLNMAEGVSAWMAMDYEQVLQSVADAREIALANVCERYGEINLRVSKEEDTEAWLWNPVLGVFRPL
>NZ_AP017469.1|WP_043494060.1|2855435_2856752_-|type-I-F-CRISPR-associated-protein-Csy1
MSYQRLAVFIEDYIAGRRQAKLDAFDKEMTKRQAAGEDESTLLQERREVALRYETRNWLTDAVNRIGQISSATHVAKFAHGDSKSSSVISEATENEGYLSTATILNQCIDFTGNAAVFDVANLLKAEVEGDSLLACLQRGDSSVLAELSEDDEQLAFWMTGFTSVLIAKPPASHKLAKQIYIPVEGGYHLLGPLFSSSLAQILHNKLIALRFSEESKEIRAAYKAGTWHPKPLVKFPNLAVMDFCSAKPQTRSLLNVARNGRVWLLSSASPQWKTQDKPPVALKNLFGRGPYERATHTLRRRLIQLLVSAGESNNHAIRQQRDRYIDELIDLLFNIAADLQRREFEGWTADENCQLKPHQQLWLDPWRAKKDEAFFNEREKGDWQDAVANDFAQWLNSHLWCDKLKVGETERREWQTQPLFKRRLHEMEQAIRRCRNE
>NZ_AP017469.1|WP_043494058.1|2854510_2855443_-|type-I-F-CRISPR-associated-protein-Csy2
MSNIIILPWIMVENANAVAGLTWGFPSITHFLGYTHALSRKLQISHGLTLEGCGVICHRHQTHAYSSGRDYQFALTRNPLTKEAKTASFNEEGRMHMTVSLVIECHGEIANGDVGMQALAEHLQNLCQTQKLAGGTITQLREVRVCSAGNLSANLYSLMPGFALYDRSLWLDEHFQALKQQNPDVEMMDAWLDFAALKMAAKKNEDQEDSATWEYLKKPRPGYLVPLMIGWQRISPLYEPGTVINARDNETPFCFAEPVYGIGEWRGVHRIKEPDELFWRYHITDTGYYCRGQSLPDDIMPDDSHYSDEF
>NZ_AP017469.1|WP_096388033.1|2853501_2854500_-|type-I-F-CRISPR-associated-protein-Csy3
MAKTSVIKTASVLAFERKLANSDAVMYSGNWHGDVWQPVRIQEKAVRGTISNRLKNAIASDPTKLDAEIQKANLQRVDVAALPMDADTLKVMFTLRVLGNLSTPSVCNDQEYQAALQEVIEGYIAEHGFAELAARYAENLANGRFLWRNRIGAEAIEVHISSGEQHWKFDAQNYSLREFSQPKGDLRALAQVIETGLRGESFALLTVNAFVHLGAGQEIFPSQELVLDSNSKKSKVLYQVSDVAAMHSQKVGNALRTIDTWHPMVESLGAIAVEPYGSVTSRGVACRQPKEKMDFYTLLDKWVTKGEKPATEQQHYVMAVLIRGGVFGEKGE
>NZ_AP017469.1|WP_096388031.1|2852937_2853492_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNFYQDIRVLEDPEFSEAMLMAALFAKLHRALGAYGEGDIGVSFPQAAKTLGYTIRLHGSQQALSAIAATPWLKGLRDYTQCSDILAVPEKVAYRTVSRVQVKSSAERLRRRSVKKGWLTEEQARLQILDVNEQRTSLPFVVLKSLSTGQMFHLFIRQGELQTQPTAGKFSSYGLSATATVPWF
>NZ_AP017469.1|WP_043494046.1|2851347_2851926_-|flavodoxin-family-protein
MTALAVVFHSGYGHTAKAAEAVAAGAQQIDGVSVEVLAIDSEGNLPEGGWHLLAQADAIIFGSPTYMGGPSWQFKKFADASSKPWFSQEWKDKVFAGFTNSASMNGDKLGTLDYMFHLSQQHGGVWVGMGMLPSNTKAANRNDVNYIAGFSGLMTVSPSDASPDEAPLPGDLETARKFGERVAHVTKRWSSV
>NZ_AP017469.1|WP_025798019.1|2850487_2851198_-|Bax-inhibitor-1/YccA-family-protein
MDRYPRDNGSIVERANSGLQAYMAQVYGWMTCGLLLTSIVAWYAAHTPAVLNFIFSSKITFFGLIIVQLGLVFVLSGMVQKLSAAAATSLFMLYSALTGLTLASIFIVYTYSSIASTFVVTAGMFGAMSLYGYTTKRDLSGIGSMMFMGLIGIILASLVNIWLKSPALTWVITYAGVIIFVGLTAYDTQKLKAMGEQLNPEDKDNFRKYSILGALTLYLDFINLFLMLLRIFGNRR
>NZ_AP017469.1|WP_043494043.1|2849684_2850401_+|ABC-transporter-ATP-binding-protein
MPLINIQDLHVSFSDGRQRKHVVKSAHFQVNEGETFSLIGASGCGKSTILRVIAGLQREWQGQIDLLGSPLRPQKRLNGEIRRNVQMVFQDPYASLHPQHRLYRSLAEPLQIHREPNVEQRVAEALQQVGLPADAAQRFPHQISGGQRQRVAIARALLLRPKILLLDEPTSALDMSVQAEILNLLNLLKRLHSMTYLLVSHDADVIAHMSQRAALMEDGKIMREFNRAALARGEHRFD
>NZ_AP017469.1|WP_172863846.1|2848816_2849698_+|ABC-transporter-ATP-binding-protein
MACVIFWSPIMTDISQNHSLIEAVDLSVHFGQACVVNQLNFSLGHERLALVGESGSGKSMTARALMGLIRQPGKVRATTLRFEQQNLLAQKPKQWSALRGNSIAMVLQDPRYALNPVHTIYRQIEEALTLHQRLSRRQRDELVLHTAESVGLPAHSLKRYPGELSGGLGQRAMIAIALINNPKVLIADEPTSALDARLRHQILSLLVEQCEQRQMGLLLISHDLPLVAEHCDRVMVMYQGQCVDELRAAELPQATHPYTRTLWTCRPNAQTYGSLLPVLDRSRTFEGAPRAAD
>NZ_AP017469.1|WP_025798003.1|2862715_2863168_-|molybdopterin-synthase-catalytic-subunit-MoaE
MENTRIRVGLDNFSVGDEYQWLSQCEDDGAVVTFTGKVRNHNLGDNVSALTLEHYPGMTEKALNEIVAEARSRWPLQRISLIHRIGAMYPGDEIVFVGVTSAHRSMAFDAAEFIMDYLKTRAPFWKREATEQGDRWVDARDSDQQAAKRW
>NZ_AP017469.1|WP_025798000.1|2863170_2863413_-|molybdopterin-synthase-sulfur-carrier-subunit
MIKVLFFAQVRELIETDELQCELYPTVEALRAALAERGDKWALALETGKLLAAVNQTLVEFTHPLQVGDEVAFFPPVTGG
>NZ_AP017469.1|WP_043494066.1|2863409_2863892_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSQLTHINAAGEAHMVDVSAKAETVREARAEAYVEMKPETLAMIVEGKHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLTKVEVQLSAEVDTSRVRIESCCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKADAS
>NZ_AP017469.1|WP_040044673.1|2863928_2864915_-|GTP-3',8-cyclase-MoaA
MLQLTDAFERKFYYLRLSITDVCNFRCTYCLPDGYKPNGHANKSFLSLDEIRRVSRAFAELGTEKVRLTGGEPSLRRDFVDIISAVRENPSIRTLAVTTNGYRMARDIADWRDAGLTAVNVSVDSLDARQFHAITGEDKLKQVMQGIDAAFDAGFEKVKVNTVLMRDVNDRSLNGFLNWIKTRPIQMRFIELMETGDGGNLFRKHHVSGEVIRDQLLALGWQRQERSRSDGPAQVFSHPDYLGEVGLIMPYEKDFCASCNRLRVSAIGNLHLCLFGESGIPLRDLLAGDEHLDELKMRIQGGLRHKKQTHFLHDGNIGHTQNLSFIGG
>NZ_AP017469.1|WP_096388039.1|2865310_2866219_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRALADLDKVVALGGGHGLGRVMSALSPLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFNGNGELAGHNLGNLMLKALDHLSVRPLEAINLIRSLLKVDASLIPMSEQPVDLNAIDQDGHVIYGEVNIDQLKEMPAQLMLEPQVQATREAVDAIEKADLILIGPGSFLTSLMPLLLLEDLTRALRRTRAHMIYIGNLGKELSVAAAALTLPDKLRIMEEAIGGHAIDGVVVGPKVNIQGMENRVVVQEMLEASDIPYRHDRDLLRMAIEKALQQLS
>NZ_AP017469.1|WP_096388041.1|2866308_2867502_-|nicotinamide-mononucleotide-deamidase-related-protein-YfaY
MLRLEMLCTGDEVLHGQIIDTNSAWLADYLFQQGIPMRARSTVGDALEDLVSTLQLRSQYADVLIVNGGLGPTSDDLSAQAAADALGERLVEHPEWIAQMEAYFASRGRPMSDSNRKQAMIPASAEMIDNPVGTACGFAIQLNGCWIFFTPGVPSEFKVMVEKQILPRLRQRFTLSEPPLCLRLTTFGRSESGLAQQLDSLPLPPNTTLGYRSSMPIIELKLTGPSSQCEAMVETWQHVRAVAGENCVFEGTAGLPHDVAVLLRERGLRLALSEQFTAGLLSWQLRSADAPLGNGELPEHSGNSSLKEVASRARILATHSGVDLTIAIGELQDDCISVVLHSAQDTFGQTMVYSSQRHSQRIRQEMTAMLALDMLRRWLTGQSPYGNYEWLKPTETL
>NZ_AP017469.1|WP_025797991.1|2867710_2868922_+|tyrosine-transporter-TyrP
MKNRTLGSIFIVAGTTIGAGMLAMPLAAAGVGFGTTFIMLVSLWALMCYTALLLVEVYQHESADTGLGTLAKHYLGRSGQWLAGASMLFLMYALTAAYISGAGELLASSLSQWLSLEIKPSVGVLLFTLIAGGVVCIGTHSVDMFNRVLFTAKIVLLVIMLTLMMPHIHQANLLTMPLEKGLALSAIPVIFTSFGFHGSVPSIVSYMNGNLRKLRWVFITGSAIPLIAYIFWQLATLGSISSSTFVGILAAQSGLNGLLQAVREVVATPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNKASGRAQTGLMTFLPPLAFALFYPQGFVMALGYAAVALAVLALLIPSMLVWQTRKHHPQAGYRVMGGKPALVLVFLCGLCVIAIQLSIASGLLPAVG
>NZ_AP017469.1|WP_096388043.1|2869102_2870128_+|tryptophan--tRNA-ligase
MSDLQTHSASHTILTGDRPTGQLHLGHYIGSLRQRVALQDLYPQFVLIADLQGLTDNGSNPQKISHNIFEVMADYLAVGIDPAKTTICLQSALPALAELTMLYMNIVSVARVERNPTVKAEIAQKGFSRTLPTGFLVYPISQAADITAFKADRVPVGDDQLPMLEQTNEIVHKMNSLLPEPTLVPCQAMLSAVSRLPGIDGNAKMSKSLGNTLTLGASADDISKAVHAMYTDPNHLRVSDPGQIEGNVVFTYLDAFHPDTAQVAAMKEHYQRGGLGDRQCKQELEACLQALLEPIRERRLQFSADKAALMEILQAGTEKAREVTQQTLAEVKRGLGLPVMF
>NZ_AP017469.1|WP_025797986.1|2870210_2870756_-|porin
MKKIVLGCACAALFSATAANAISIHGQAGEHYTNVEAGFGTDSSGLYSTLNWAHNDDDGDVAGLGLGINLPLGPFLANVGGKALYLNPQKDGSDGYAIAVGGGLQWPLTKSFSLYGEGYYSPDSLSSGINDYKEASAGLRWSVIRPVTIDVGYRYIEMSGKDGDRNNVVADGAYVGAGIGF
>NZ_AP017469.1|WP_025797984.1|2871144_2872578_+|catalase
MSKKGLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAHGTFTVTHDISKYTRAKIFSEIGKQTPMMVRFSTVAGERGAADAERDIRGFAMKFYTEEGNWDLVGNDTPVFYLRDPLKFPDLNHVVKRDPRTNLRNPVYKWDFFSQLPEAFHQLTIDFSDRGLPKSYRHMHGFGSHTFSFINADNERFWVKFHFRCQQGIENLMDDEAEALVGKDRESSQRDLFDAIERKDFPRWNLQVQIMPEKEAAQTPYNPFDLTKVWPHKDYPLIDVGYFELNRNPDNYFAEVEQVAMNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPQCPFHNYHRDGAMRVDGNSGNGATYEPNTFGVFQEQPDFSEPPLSIEGAADHWNHREDTDYYTQPRALFNLLSEEEHQRMYTRIAGELSQVPEAIQKRALCHFAQIHPDYAAGIMKALGQ

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Crispr_ID: NZ_AP017469_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_7

2941601-2941747

Orphan

Consensus_repeat	Method
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAATGTTTTAGGCGGACGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017469_7

>merge|NZ_AP017469|7|2941601-2941747|CRISPRCasFinder
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAATGTTTTAGGCGGACGTAACCTTTCACCACACTTAAGCTATAAAGGCGATTGAGCCGCCTTGCTCGGACGCCTGCACGGTTTAAATGTGGAGCTCAGTGTTTTAGGCGGACGTAA

>NZ_AP017469|7|7|2941601-2941747|CRISPRCasFinder
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAATGTTTTAGGCGGACGTAA	CCTTTCACCACACTTAAGCTATAAAGGCGATTGAGCCGCCTTGCT
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAGTGTTTTAGGCGGACGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_096388085.1\|2936190_2937501_+\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_AP017469.1\|WP_025797884.1\|2938169_2938760_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_AP017469.1\|WP_043494179.1\|2951461_2952847_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|171824
NZ_AP017469.1\|WP_096388081.1\|2930270_2932067_-\|NADH-quinone-oxidoreductase-subunit-C/D	unknown	unknown	gnl\|CDD\|236965
NZ_AP017469.1\|WP_025797890.1\|2932920_2933361_-\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|180638
NZ_AP017469.1\|WP_096388093.1\|2950621_2951452_-\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_AP017469.1\|WP_025797874.1\|2944457_2944952_-\|YfbU-family-protein	unknown	unknown	gnl\|CDD\|180087
NZ_AP017469.1\|WP_096388091.1\|2949650_2950625_-\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_AP017469.1\|WP_025797871.1\|2945207_2945663_-\|DUF412-domain-containing-protein	unknown	unknown	gnl\|CDD\|179338
NZ_AP017469.1\|WP_040046426.1\|2940394_2941000_+\|5'-deoxynucleotidase	unknown	unknown	gnl\|CDD\|235165
NZ_AP017469.1\|WP_025797882.1\|2939059_2940280_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738
NZ_AP017469.1\|WP_025797878.1\|2941798_2943631_-\|SLC13-family-permease	unknown	unknown	gnl\|CDD\|223547
NZ_AP017469.1\|WP_096388087.1\|2937556_2938177_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_AP017469.1\|WP_038502366.1\|2934035_2934986_-\|transcriptional-regulator-LrhA	unknown	unknown	gnl\|CDD\|237907
NZ_AP017469.1\|WP_096388083.1\|2935350_2936034_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_AP017469.1\|WP_025797869.1\|2946067_2947267_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_AP017469.1\|WP_040046443.1\|2943788_2944442_-\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|183215
NZ_AP017469.1\|WP_025797857.1\|2952887_2953157_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_AP017469.1\|WP_096388089.1\|2947418_2949569_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NZ_AP017469.1\|WP_025797891.1\|2932197_2932872_-\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|223454

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_096388085.1\|2936190_2937501_+\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	6.7831e-73
NZ_AP017469.1\|WP_025797884.1\|2938169_2938760_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.20618e-27
NZ_AP017469.1\|WP_043494179.1\|2951461_2952847_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|171824	PRK12996, ulaA, PTS ascorbate transporter subunit IIC.	0
NZ_AP017469.1\|WP_096388081.1\|2930270_2932067_-\|NADH-quinone-oxidoreductase-subunit-C/D	gnl\|CDD\|236965	PRK11742, PRK11742, bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional.	0
NZ_AP017469.1\|WP_025797890.1\|2932920_2933361_-\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|180638	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated.	3.86763e-64
NZ_AP017469.1\|WP_096388093.1\|2950621_2951452_-\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	4.1801e-125
NZ_AP017469.1\|WP_025797874.1\|2944457_2944952_-\|YfbU-family-protein	gnl\|CDD\|180087	PRK05445, PRK05445, YfbU family protein.	1.37391e-110
NZ_AP017469.1\|WP_096388091.1\|2949650_2950625_-\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	6.7022e-147
NZ_AP017469.1\|WP_025797871.1\|2945207_2945663_-\|DUF412-domain-containing-protein	gnl\|CDD\|179338	PRK01816, PRK01816, hypothetical protein; Provisional.	5.93528e-96
NZ_AP017469.1\|WP_040046426.1\|2940394_2941000_+\|5'-deoxynucleotidase	gnl\|CDD\|235165	PRK03826, PRK03826, 5'-nucleotidase; Provisional.	3.13961e-139
NZ_AP017469.1\|WP_025797882.1\|2939059_2940280_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_AP017469.1\|WP_025797878.1\|2941798_2943631_-\|SLC13-family-permease	gnl\|CDD\|223547	COG0471, CitT, Di- and tricarboxylate transporters [Inorganic ion transport and metabolism].	2.5239e-70
NZ_AP017469.1\|WP_096388087.1\|2937556_2938177_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	4.952e-14
NZ_AP017469.1\|WP_038502366.1\|2934035_2934986_-\|transcriptional-regulator-LrhA	gnl\|CDD\|237907	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional.	0
NZ_AP017469.1\|WP_096388083.1\|2935350_2936034_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.95405e-33
NZ_AP017469.1\|WP_025797869.1\|2946067_2947267_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_AP017469.1\|WP_040046443.1\|2943788_2944442_-\|sugar-phosphatase	gnl\|CDD\|183215	PRK11587, PRK11587, putative phosphatase; Provisional.	7.5302e-151
NZ_AP017469.1\|WP_025797857.1\|2952887_2953157_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.16396e-34
NZ_AP017469.1\|WP_096388089.1\|2947418_2949569_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NZ_AP017469.1\|WP_025797891.1\|2932197_2932872_-\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|223454	COG0377, NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion].	1.65302e-106

>NZ_AP017469.1|WP_040046426.1|2940394_2941000_+|5'-deoxynucleotidase
MSQNQSHFFAHLSRLKLISRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNVNPERVALLAMYHDASEVLTGDMPTPIKYYNPQIAHEYKKIEKVAQQKLIEMLPPELQNDFRPLLDEHYYTEDEKLVVKQADALCAYLKCLEELSAGNNEFKLAKARLEKTLDMRSSPEMEYFMEVFIPSFSLSLDEISQDEVM
>NZ_AP017469.1|WP_025797882.1|2939059_2940280_+|pyridoxal-phosphate-dependent-aminotransferase
MSPIEKSRKLDHVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARDIHDVTVEDIYIGNGVSELIVQSMQALLNSDDEMLVPAPDYPLWTAAVSLSGGNAVHYRCDEEADWFPDLDDIRSKITPRTRGIVIINPNNPTGAVYSKELLEEIVTIARENNLIIFADEIYDKILYDDAEHISIASLAPDLLVVTFNGLSKTYRVAGFRQGWMVLSGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTAIGGYQSINEFIQPGGRLYEQRNRAWELINEIPGVSCVKPRGALYMFPKIDAKRFNVHDDQKMVLDLLLQEKVLLVQGTAFNWPEPDHFRIVTLPRVDDLDMAIHKLGRFFSGYHQKY
>NZ_AP017469.1|WP_025797884.1|2938169_2938760_-|carboxymuconolactone-decarboxylase-family-protein
MKNNDNQPWISPLKKIPTVLTPIVRAQEKHYGQILNPTRWWGRFPFLFWLVAFFVGFLERRGSGITPTVRALVMTRVSQQCDCAFCIDANSLRLAERSGSLDKVMSVQNWQAADCFDEQERAALAYADGMTATPPRIDDSLKTELKSHFNEKAITELTALIAFQNLSARFNAALDIPSQGLCVPETAVKRKGAPRV
>NZ_AP017469.1|WP_096388087.1|2937556_2938177_-|CDP-alcohol-phosphatidyltransferase-family-protein
MFDRYLHPRVKPLLNQMVAHLDRPAITPDRISLGGFVVGVLALPFLAMQWYYAALIVIVINRLCDGLDGALARRRGLSDAGGFLDIALDFLFYALVPFGFVLASPELNAVAGAWLLFAFIGTGSSFLAFAAVADKYRLENLDYPHKSFYYLGGLTEGAETILVFILFCLFPAYFPLIAWLFGGLCWFTTLTRVWGGYNTLKRVEKI
>NZ_AP017469.1|WP_096388085.1|2936190_2937501_+|sulfurtransferase
MKFSFQLATSALLLGWLQVANAAAIPMTQTTLADVQSQKGAVIDTRPSAFYNGWPQVVDGASGHEPQAVNLSAGWLSEMNDQQLQQWATQHQITSDRKVALYGTAAQTSAVQERLAKLGYANITLLSDALAQPKRLQRMPHFEQLVYPKWIYDLQQGKAVAAKPAGEWKVIEAAWGAPKKYLISHIPNAGYIDTNDVESEPLWNKVSDDKLKALMAKQGIKHDTTVILYGRDVYAAARVAQILLYAGVKDVRLLDGGWQTWSAAGLPVERGLPKEAKPAPDFGAAIPGQPQIMLNEEQARGLLHRKDASLVSIRSWPEFTGETSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDIAAMWKEWHITPDQHVSFYCGTGWRASETFMYARAMGWPSVSVYDGGWYEWSANPKNPVVTGERGPDSSWK
>NZ_AP017469.1|WP_096388083.1|2935350_2936034_-|TVP38/TMEM64-family-protein
MFKRRQRNIVILLCLIGGAMMWFEPVRHQLKTLWGLFSSLDVNVMMEYLRSFGPWAMAVSFLLMIFQAVAAPLPAFLITFANAALFGWWQGALLSWCSSMVAAWLCFVLARWLGRDTIEKFVSEKALNSSDRFFERYGKHTILICRLLPFISFDIISYAAGLTSIKVSVFLMATGIGQLPATLVYSYVGGMLTGGLRWFITGLLIMFSLSILIFALKNKKHSRGNNS
>NZ_AP017469.1|WP_038502366.1|2934035_2934986_-|transcriptional-regulator-LrhA
MINTHRPTINLDLDLLRTFVAVADVKTFAAAAIVVQRTQSAVSQQMQRLEQLVGKELFARHGRNKQLTEHGVQLLGYARKILRFNDEACSSLIYNHLQGSLIIGATDDTADSILPFLLSRFTSLYPKLEIDVRVKRSPDMRQLLKDREIDLAVTTMGFDEFSYETLRRSPTVWFCATDYDFQPSEPVPLVVLDEPSPFRALAIKHLNEAGIPWRIAYVASTLSAVRAAVKAGLGVTARPIEMMSPELRVLGLSERLPKLPETEYALCLAPNCTNELATILFSSLKAGSDPYIEGGPGVTVQTVQEGSFSSGPEDVA
>NZ_AP017469.1|WP_025797890.1|2932920_2933361_-|NADH-quinone-oxidoreductase-subunit-A
MSTATEVIAHHWAFAVFIIIALGLCGVMLLGAYALGGRARARSKNTPYESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLYAWSVSIRESGWIGFIEAAIFILVLLAGLFYLVRIGALDWTPARSKRRVEHESTVTNTDSRPQ
>NZ_AP017469.1|WP_025797891.1|2932197_2932872_-|NADH-quinone-oxidoreductase-subunit-B
MDYTLTRIDPDGENDRYPLQKQEIVSDPLEQHVHRSVYMGKLENALHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGSCANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMPSEKERKRAERIAVTNLRSPDEI
>NZ_AP017469.1|WP_096388081.1|2930270_2932067_-|NADH-quinone-oxidoreductase-subunit-C/D
MTDSTTQDLNLPAWQTRDHLDDPVIGELRNRFGPDAFTVQPTRTGMPVVWVKREQLLEVMTFLKKLPKPYVMLFDLHGMDERLRTHRQGLPEADFSVFYHIISIERNRDIMLKVALSEKDMHLPTVTKIFPNANWYERETWEMFGMTFDGHPHLTRIMMPQSWEGHPLRKDYPARATEFDPFELTKQKQDLEMESLTFKPEDWGMKRSTENEDFMFLNLGPNHPSSHGAFRIVLQLDGEEIVDCVPDVGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIEVPERVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKVYDVVEAITGFRMHPAWFRIGGVAHDLPRGWERLLRDFLDWMPKRLDSYVKAALKNTILKGRSVGVAAYNSKEALDWGVTGAGLRATGVEFDVRKWRPYSGYENFDFEVPVGHNGDCYDRVMLKVEELRQSLRILEQCYKNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMVEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAVIRGSLVSDLIVYLGSIDFVMSDVDR
>NZ_AP017469.1|WP_025797878.1|2941798_2943631_-|SLC13-family-permease
MNGELLWVLTLLLIAIVLFATNKLRMDVVALLIIIAFVLSGTLSLSEATAGFSDPNVILIAALFVIGDGLVRTGVAYQVGDWLVKVAGDSEAKMLVLLMITVAALGAVMSSTGVVAIFIPVVLSVAARMKISPARLLMPLSFAGLISGMMTLVATPPNMIVSSELVREGFHGLSFFSVTPVGIIVLLMGVGYMLVARNWLASGKDDNDKDSWKRRTFRDLIRDYKLTGRARRLALRSGSPLIGHTLDELHLRSRYGANVVGIERWRKFRRVMVSAIGNTELKDRDVLLIDMSDSEVDLREFCAEQMLEPMVLRGEYFSEQARDVGMAEVTIVPDSDLIGKTLREMTFRTRYGLNVVGIRRDGVPMEGKLVNEPLQLGDILLVIGNWKQIRQLQLQPRDFIVLHLPAEVDDVAPAISQAPHALFCLALMIAMMLTDEVPNAIAALIACMLMGKFRCIDMESAYKSIHWPSLILIVGMLPFALALQKTGGITLAVDVLMDLVGGMGPRIVLLSLFVFCAVTGLFISNTATAVLMAPIAIATAHAMHLSPYPFAMIVAISASAAFMTPVSSPVNTLVMGPGNYSFGDFVKIGVPFTILVMIASVIVVPWLFPF
>NZ_AP017469.1|WP_040046443.1|2943788_2944442_-|sugar-phosphatase
MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGVDPQEVLDFIHGKQAITSLRHFMSGESEDRIQQEYDWLEEIESRDTDGVTALPGAKALLDRLDELNIPWAIVTSGSIPVAYARRAAGQLPKPDVFITAEQVARGKPEPDAYLLGAQKLGLAVSDCVVVEDAAAGILSGLSAGCQVIAVNAPQDAPKLDLVDLNLTSLTQIRIEKEGDYAVIHAL
>NZ_AP017469.1|WP_025797874.1|2944457_2944952_-|YfbU-family-protein
MEMTNAQRLILSNQYKMMTMMDPDNAERYRRLQTIIERGFGLQMRELDRDFGELSEDTCRTIINIMEMHHALQVSFNNLKEKQDLDPRRLEFLGFDAATESRYLSYVRFMVGTEGRYTHFDSGTHGFNAQTKMWDKYQRMLSIWQSCPRQYHLSAVEIAQIINA
>NZ_AP017469.1|WP_025797871.1|2945207_2945663_-|DUF412-domain-containing-protein
MTSKPTGHVGWFQIFQRGQTYMKTWPSDKRLAPMFPENRIAKVTRFAVRFMPPIAIFTLTWQIALGGQLGPAIATALFACSLPMQGLWWLGKRSVTPLPPTLLQWFHEIRAKLVEAGKAQAPVEGTPTYQSLADVLQRAFKQLDKTFLDDI
>NZ_AP017469.1|WP_025797869.1|2946067_2947267_+|acetate-kinase
MSKLVLVLNCGSSSLKFAIINAANGEEHLSGLAECFSLPEARIKWKMDGAKHEEALGAGAAHSEALNFIVNTILAQKPELSASLTAIGHRIVHGGEKFTESALITDEVLQGIKDAIPFAPLHNPAHLIGIAEAFKSFPNLKDKNVAVFDTAFHTTMPEESYLYALPYSLYKDHGVRRYGAHGTSHFFVSQEAAKMLNKPVEELNVITCHLGNGGSVTAVRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDSLGMSVEQINKLLTKESGLLGLTEVTSDCRYVEDNYETKADAKRAMDVFCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELTLDKLGLLGFEIDHERNLAARFGKSGTITKDGSRLAVVIPTNEELVIAQDASRLTA
>NZ_AP017469.1|WP_096388089.1|2947418_2949569_+|phosphate-acetyltransferase
MSRTIMLIPTSTSVGLTSVSLGVIRSMEQKGVRLSVFKPIAQPRTGGDSLDQTTTIIRANSSIPAAEPLRMSYVETLLSSNQQDVLMEEIVARYHENTKDAEVVLVEGLVPTRKHQFANALNYEIAKTLNAEIVFVMALGNDSASQVKERIELARSSFGGSKNKNITGVIINKLNAPVDDQGRTRPDLSEIFDDSNKASIANLDTAQLIENSPLPVLGCVPWSFELIATRAIDMANHLKARVVNEGDIKTRRIKSVTFCARSIPHMLEHFRPGSLLVTSADRPDVLVAACLAAMNGVEIGAILLTGGYDMDERIAKLCERAFQTGLPVFMVDTNTWQTSLSLQSFNLEVPADDHQRVEKLQNYVASHIDSKWIDSLSAASERSRRLSPPAFRYELTELARKACKRVVLPEGDEPRTVKAAAICAERGIAECVLLGNPEEIQRVAAAQGVVLGKGIEIVDPNVVREQYVPRLVELRKSKGMTEVVAREQLEDNVVLGTLMLEQNQVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPDQVLVYGDCAINPDPTAEQLSEIAIQSADSAAAFGIEPRVAMISYSTGNSGAGSDVEKVREATRLAQEKRPDLIIDGPLQYDAAIMADVAKSKAPNSPVAGKATVFIFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQAAQAAAAK
>NZ_AP017469.1|WP_096388091.1|2949650_2950625_-|transketolase-family-protein
MSHEFLPLQKDKMEMRKVYAQAMRDQFIANTPVIALEADLMSSMAMDSVHRDFPQQVINCGIMEANVIGTAAGLSLAGRIPFVHTFTAFASRRCFDQLFMSVDYQKNNVKVIASDAGVSACHNGGTHMSFEDMGIVRGLAHSVVMEMTDATMFQNILHQLVNLKGFHWVRTIRKQAYTIYPSGTEFTIGKGKVLQDGKDITLIANGIMVAEALQAAQMLTEQGYSAAVIDMFTLKPIDKDLIIEYAAKTGRIVTCENHSIHNGLGSAVAEVLVENHPVPMRRVGVKERYGQVGTQDFLMQEYELTAEDIVKQAMGLLEDNPIKR
>NZ_AP017469.1|WP_096388093.1|2950621_2951452_-|transketolase
MLNLKEVQRYATEIRVETLKALTNLGFGHYGGSMSVVETLAVLYGAVMKVDPVQPQWPGRDNFVLSKGHAGPALYSALALKGYFPREALATLNENGTHFPSHPDRLLTRGVDATTGSLGQGVSIATGMALAHHLAGRKNRVFCILGDGELNEGQCWEAFQFIAHHNLNNLTLFIDYNKQQLDGTLDEVIKPFDLNAKFSAFGFDVVSVKGDDITAIYEAIAPVRSGEQRPRVVLLDSIKGQGVPYIEQLPNSHHLRLTDDIKAEMQKAIAILEATL
>NZ_AP017469.1|WP_043494179.1|2951461_2952847_-|PTS-ascorbate-transporter-subunit-IIC
MFIQETLKFIVDILKVPAVLVGIIALVGLLAQKKSFSDVVKGTVKTILGFIVLGGGAGVLVSSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGAATALIMAFGMVANIVVARFTKLKYIFLTGHHTFYMACMIGIILTVAGFEGVQLVFTGALTLGLVMAFFPALAQRYMRKITGNDDIAFGHFGTLGYILSGWIGGRVGKGSRSTEEMNLPKNLSFLRDSSISISLTMMVIYLIMAVSAGSDFVEATYSAGQNYLVYSIIMAITFAAGVFIILQGVRLILAEIVPAFTGFSERLVPNARPALDCPVVYPYAPNAVLIGFLFSFLGGLVGLFLLGQFNLVLILPGVVPHFFTGATAGVFGNATGGRRGAMIGAFANGLLITFLPVLLLPVLGALGFANTTFSDADFGGIGIVLGNMARFMNKDMIMAVIIAIFVALVAHNYFFSRKISPSTSADSANK
>NZ_AP017469.1|WP_025797857.1|2952887_2953157_-|PTS-sugar-transporter-subunit-IIB
MKIMAICGSGLGSSFMVEMNIKKVLKKMGVEADVEHSDLSSAIPSEADLFVMAKDIAASASIPDNQLIVITNIIDINELETKLRAYFNK

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Crispr_ID: NZ_AP017469_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017469_8

4069179-4069285

Orphan

Consensus_repeat	Method
GGGAGGGAACCGTTCAGCGTTGATCGAAAGATTCTCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017469_8

>merge|NZ_AP017469|8|4069179-4069285|CRISPRCasFinder
GGGAGGGAACCGTTCAGCGTTGATCGAAAGATTCTCGAGCAACTCCTCCCCCTGCGAAGGGGAGGCTGGGAGGGAACCGTTCAGCGTTGATTGAAAGATTCTCGAGC

>NZ_AP017469|8|8|4069179-4069285|CRISPRCasFinder
GGGAGGGAACCGTTCAGCGTTGATCGAAAGATTCTCGAGC	AACTCCTCCCCCTGCGAAGGGGAGGCT
GGGAGGGAACCGTTCAGCGTTGATTGAAAGATTCTCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017469.1\|WP_025798518.1\|4079560_4080889_-\|putative-aminohydrolase-SsnA	unknown	unknown	gnl\|CDD\|132357
NZ_AP017469.1\|WP_043488888.1\|4075840_4078717_-\|molybdopterin-dependent-oxidoreductase-Mo/Fe-S-binding-subunit	unknown	unknown	gnl\|CDD\|182084
NZ_AP017469.1\|WP_096388583.1\|4064972_4066286_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_AP017469.1\|WP_043488909.1\|4066511_4066847_+\|DUF2002-family-protein	unknown	unknown	gnl\|CDD\|370464
NZ_AP017469.1\|WP_096388582.1\|4060922_4062359_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|184975
NZ_AP017469.1\|WP_043488906.1\|4066953_4067646_-\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|224265
NZ_AP017469.1\|WP_096388585.1\|4078718_4079495_-\|molybdopterin-dependent-oxidoreductase-FAD-binding-subunit	unknown	unknown	gnl\|CDD\|182083
NZ_AP017469.1\|WP_096388581.1\|4059276_4060050_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235924
NZ_AP017469.1\|WP_096388587.1\|4084367_4085003_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|274516
NZ_AP017469.1\|WP_025798495.1\|4064093_4064825_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_AP017469.1\|WP_025798504.1\|4068229_4069144_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176129
NZ_AP017469.1\|WP_157743854.1\|4072866_4074183_-\|guanine-deaminase	unknown	unknown	gnl\|CDD\|236419
NZ_AP017469.1\|WP_096388781.1\|4074220_4075609_-\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_AP017469.1\|WP_025798493.1\|4062396_4063914_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_AP017469.1\|WP_025798509.1\|4071245_4072613_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_AP017469.1\|WP_096388586.1\|4080891_4083978_-\|putative-selenate-reductase-subunit-YgfK	unknown	unknown	gnl\|CDD\|236630
NZ_AP017469.1\|WP_096388588.1\|4085034_4085838_+\|putative-selenium-dependent-hydroxylase-accessory-protein-YqeC	unknown	unknown	gnl\|CDD\|274467
NZ_AP017469.1\|WP_046359528.1\|4060411_4060843_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017469.1\|WP_046448917.1\|4069358_4071008_-\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|129911
NZ_AP017469.1\|WP_096388780.1\|4067642_4068083_-\|CidA/LrgA-family-protein	unknown	unknown	gnl\|CDD\|224298

Protein	Function_ID	Function_description	E-value
NZ_AP017469.1\|WP_025798518.1\|4079560_4080889_-\|putative-aminohydrolase-SsnA	gnl\|CDD\|132357	TIGR03314, Se_ssnA, putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.	0
NZ_AP017469.1\|WP_043488888.1\|4075840_4078717_-\|molybdopterin-dependent-oxidoreductase-Mo/Fe-S-binding-subunit	gnl\|CDD\|182084	PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional.	0
NZ_AP017469.1\|WP_096388583.1\|4064972_4066286_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_AP017469.1\|WP_043488909.1\|4066511_4066847_+\|DUF2002-family-protein	gnl\|CDD\|370464	pfam09400, DUF2002, Protein of unknown function (DUF2002). This is a family of putative cytoplasmic proteins. The structure of these proteins form an antiparallel beta and sheet and contain some alpha helical regions.	1.31824e-58
NZ_AP017469.1\|WP_096388582.1\|4060922_4062359_-\|6-phospho-beta-glucosidase	gnl\|CDD\|184975	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional.	0
NZ_AP017469.1\|WP_043488906.1\|4066953_4067646_-\|LrgB-family-protein	gnl\|CDD\|224265	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane].	7.80313e-87
NZ_AP017469.1\|WP_096388585.1\|4078718_4079495_-\|molybdopterin-dependent-oxidoreductase-FAD-binding-subunit	gnl\|CDD\|182083	PRK09799, PRK09799, putative oxidoreductase; Provisional.	2.89303e-129
NZ_AP017469.1\|WP_096388581.1\|4059276_4060050_+\|SDR-family-oxidoreductase	gnl\|CDD\|235924	PRK07063, PRK07063, SDR family oxidoreductase.	2.36494e-65
NZ_AP017469.1\|WP_096388587.1\|4084367_4085003_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|274516	TIGR03310, matur_MocA_YgfJ, molybdenum cofactor cytidylyltransferase. Members of this protein include MocA, which transfers cytosine from CTP to molybdopterin during molybdopterin cytosine dinucleotide (MCD) cofactor biosynthesis. It is distantly related to MobA, the GTP:molybdopterin guanylyltransferase. The MocA family is particularly closely related in phylogenetic distribution to other markers of selenium-dependent molybdenum hydroxylases (SDMH), suggesting most SDMH must use MCD rather than molybdopterin guanine dinucleotide.	8.37585e-58
NZ_AP017469.1\|WP_025798495.1\|4064093_4064825_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	4.1653e-57
NZ_AP017469.1\|WP_025798504.1\|4068229_4069144_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176129	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold. This CD includes the substrate binding domain of CidR which positively up-regulates the expression of cidABC operon in the presence of acetic acid produced by the metabolism of excess glucose. The CidR affects the control of murein hydrolase activity by enhancing cidABC expression in the presence of acetic acid. Thus, up-regulation of cidABC expression results in increased murein hydrolase activity. This substrate binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.52348e-78
NZ_AP017469.1\|WP_157743854.1\|4072866_4074183_-\|guanine-deaminase	gnl\|CDD\|236419	PRK09228, PRK09228, guanine deaminase; Provisional.	0
NZ_AP017469.1\|WP_096388781.1\|4074220_4075609_-\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	1.85585e-134
NZ_AP017469.1\|WP_025798493.1\|4062396_4063914_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	4.22938e-150
NZ_AP017469.1\|WP_025798509.1\|4071245_4072613_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.496e-147
NZ_AP017469.1\|WP_096388586.1\|4080891_4083978_-\|putative-selenate-reductase-subunit-YgfK	gnl\|CDD\|236630	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional.	0
NZ_AP017469.1\|WP_096388588.1\|4085034_4085838_+\|putative-selenium-dependent-hydroxylase-accessory-protein-YqeC	gnl\|CDD\|274467	TIGR03172, Uncharacterized_protein_YqeC, probable selenium-dependent hydroxylase accessory protein YqeC. This uncharacterized protein family includes YqeC from Escherichia coli. A phylogenetic profiling analysis shows correlation with SelD, the selenium donor protein, even in species where SelD contributes to neither selenocysteine nor selenouridine biosynthesis. Instead, this family, and families TIGR03309 and TIGR03310 appear to mark selenium-dependent molybdenum hydroxylase maturation systems. [Unknown function, General].	3.99025e-59
NZ_AP017469.1\|WP_046448917.1\|4069358_4071008_-\|Na+/H+-antiporter	gnl\|CDD\|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_AP017469.1\|WP_096388780.1\|4067642_4068083_-\|CidA/LrgA-family-protein	gnl\|CDD\|224298	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only].	3.17638e-29

>NZ_AP017469.1|WP_025798504.1|4068229_4069144_+|LysR-family-transcriptional-regulator
MDVRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLRHLEDELGCTLLIREGRRLHLTDSGQAVYQRGLAILDQFSQLRAELEDISTVKRGQLKLGIPPMVGTQMAGLINEFRHNYPGIELIISEFGGLTVEQAVLSGELDLALTALSGDTDGDIASLPLFSHPLCVLVPRTEEWLSRTSIAMPELAEQNILIYNEDFALYKQLMQAFAAHNVTPQIAVRSGQWDFLAAMVQAGVGIAILPEPICQRLDPKTLLWLPLEPKLMWELGLIWCEGRYLSHSAQAWIARCREYWPNGEMHPEWITLK
>NZ_AP017469.1|WP_096388780.1|4067642_4068083_-|CidA/LrgA-family-protein
MSLALRSRAPFVLSRLQVPVQVALYAALFLVAQWAVVRFHLPLPANIVGMLMLLAMIVLRVLPIKWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVEGWRIFAVIAVSTTLTLGLTALVVDRVYRFEIYLQRKKQSAAYKRDRV
>NZ_AP017469.1|WP_043488906.1|4066953_4067646_-|LrgB-family-protein
MSSLSISVLCLLMTLALYFANKKIYRRLHTIWMMPLVLTPLILVLFLVVTHVSYQDYMGESHWLLWLLGPATIAFAVPVYENMTVIRRHWMSLSAGVITATVVAVSSSVWLARLLTLPEEVQRSLAVRSITTPFALEAAKQLGGQPDLVALFVVITGVFGMAVGDILFLRLAVRSGMAKGAGLGASSHGAGTAKAYEIGQTEGVVSSLVMMLAGVVTVVLAPLIGHVMWS
>NZ_AP017469.1|WP_043488909.1|4066511_4066847_+|DUF2002-family-protein
MYLRPDEVAQVLERTGFIRDYVTDKAYGFHKGDHYVYVNREARMGRTALVIHPALGQKSLKFAHPAEPLRSSVAYTRFPQDPHAVETAFVGIPHGFTSRARLSQYLEKMFQ
>NZ_AP017469.1|WP_096388583.1|4064972_4066286_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MKKITKGFFSLSALALFIPLAAQSADVSPAAPEGYQLEQVLIFSRHGIRAPLVGYGDILAESTPHQWPVWKTEGGLLTPKGAEVETLFGKYMRDWLAQTGILPAGGCPTDGAVFVYANSLPRTIDTAKSFVSGAFPECSLKVNHQAKIGTMDPTFNPIITAKVTDEFKQKAIESINQHAGQGGIDGLNERLKPNYAVLQQVMDYGQSKVCTEKKTCSLAEQPNTVNIVQDKEPGITGPLRVGTGASDGFMLQYYEGYPLKEVAWGQITDEKQWQQLEEIKNLYHETLFGSSAVAQNAAAPLMRFVSAALVGTPDNNALVADAHKAKVAVLVGHDSNIASLLAAMKTAEYELPKQYEKTPISGKIVFQRWHDKNDNRDLMKIEYVYQSTDQIRNATPLSLSSPAQRVVLQIDGCKIDANGFCPMDDFKTAIAKDIQGQ
>NZ_AP017469.1|WP_025798495.1|4064093_4064825_-|MurR/RpiR-family-transcriptional-regulator
MFTHIALSTLNGLELMVYNYVIKNKDKVMYMTIRELADEADVSTTTILRFCKKMNCSGYSEFRIRFKLYLEQEEKLLLTSGASEIMSFFKSIHNDEFEELITRTAEQIAEAERIIFVGAGTSGTLGKYGARFFSNVGKFSNYIDDPYYPISTDMYKNAIAIILSVSGETPEILKLASQFSLHHCKIISITNSETSSLARMADFNLSYHMPQILIASEYNITTQVPVIYMLEAIGKKLAKNISS
>NZ_AP017469.1|WP_025798493.1|4062396_4063914_-|PTS-transporter-subunit-EIIC
MAINYADSAKEIVKLIGSDNNVINVTHCATRLRFVLKDNSQVDKETLKRVKGVITVIESSGQLQVVIGNHVGDAYREVLKLIQVDENAAVSAPNVGIVSRLMDIISSIFAPFLYPLAACGVLQGLISLFAVLGWMDPASGTYRILNFVSWTGFTFLPVMVAYTAAKKFNVNPFTAVIAACALVCPDYMSMLTANKILLVNSADPAMQELMKEAVNNPQIARVLTEVVGIPLSADPLTFLGMPVEYLSYTSAVIPIILMVWMMSYVQRFFERILPLVIRNLFTPMFCLAIIVPLTLLVFGPIGNMIGGAIGGVYNTLYHLSPAVAGFVVGALWTPLVTLGVHWGITPVTVGNYATLGYDTFTGLQASAVFAMAGAVLGVYLKSKDAEMKRVALSAGMTGLFGITEPAIYGVALRLKRPMVCACMAGAVGGAIAGSFNAVSWSYCIPGIAVLPVFFKEGHLPQFLGFVLSISVAFVLGAVFTWFAGFKEEIPAAVTDTKAAAQPEVA
>NZ_AP017469.1|WP_096388582.1|4060922_4062359_-|6-phospho-beta-glucosidase
MKQQRLPDDFLWGGAVAAHQVEGGWDQGGKGPSIVDVLSSGSHGVDRVITDGIQDGYLYANHDAVDFYHRYKGDIALFAEMGFKCFRTSIAWSRIFPNGDEVEPNEAGLQFYDEMFDELLKYGIEPVITLSHFEMPWHLVKEYGGWKNRKVIDFFVHFSEVVIKRYQHKVKYWMTFNEINNQRNWKTPLFGYCCSGVIYTNEPNPEECMYQVLHHQFVASAQVVKLGHDINPALQIGCMIAMVPLYPYSCHPDDVMYAQEAMRERFLFGDVHMRGYYPSYILKEWERKGYHIEMQPDDKQILLDGCADYIGLSYYMSNAVQANSAGTGTALAGFEGSVPNPHVKASEWGWQIDPVGLRYTLNILYERYQKPLFIVENGFGAVDKAGADGQIHDDYRIAYLKSHIEQMKKAVIDDGVELMGYTPWGCIDCVSFTTGQYSKRYGFIYVDKHDDGTGTQERSKKQSFDWYKQVIESNGEKL
>NZ_AP017469.1|WP_046359528.1|4060411_4060843_+|hypothetical-protein
MKKTLLALFVLSPFAALAATPAQPMIGNYHAVGYTTCGGFKVLSSAISNENVMVLQITDPISKASQIYYGNRTDDESEKVQYVLSNYDEKTKQFTPDPSNTTINFGIKMGHPGTPGNDLYNLTMAGQTYICKQFTIFNSLSKK
>NZ_AP017469.1|WP_096388581.1|4059276_4060050_+|SDR-family-oxidoreductase
MSTSAQQPRVVIVTGASQGIGHAIAQTFLKNGDIVIGCAFSPLEKAPHAKTLLDHYPEHFCYYSVDITRTESISEFVAAVEQRFGRLDVLVSNAGKNVFKGIDCELEDWHHNLDLNLRSHWYMAKSCRGMLEKSRGVILVMTSNHAFSTMPGCAPYNITKRALLSLVQSLTIEWGSAIRSVGIAPGFIDTAGNQVWFDSQGDGEKARQETIAKHPVGRIGTSEEVGELCLFLSSPAAGFIAGTTIVMDGGRSALMQD
>NZ_AP017469.1|WP_046448917.1|4069358_4071008_-|Na+/H+-antiporter
MEIFFTILILILVVSLSGVVTRMLPFQIPLPLMQIAIGALLAWPHFGLHVDFDPELFLVLFIPPLLFADGWKTPTREFLHHGREILGLALVLVLITVVGVGYFLHILLPEVPLVAAFALAAVLSPTDAVALGGIVGKGRIPKTIMGVLEGEALMNDASGLVALKFAIAVAMGTMVFTVGGATLEFLKVAIGGLLAGVAVTWLYSKSLRLMSRWAGDDPATQIVFLMLLPFASYLIAEHVGVSGILAAVAAGMTISQSGVIRNAPLTMRLRANSVWAMLEFVFNGMVFIMLGLQLPGILESSIIQAERDPTIQTWFLFTDVALVYGVLLVLRFLWLWCMRRLSLRFIKRNPLQFASYSLRDLWIASFAGVRGAITLAGVLSIPLFLTDGTPFPGRYQLVFIATGVILFSLIVGVVALPLLLKGMEVNDTNTYREEESMAKSVTAEVAIESLKKMQERLEVDTEENIDPQLLTEVSSRVIGSLRRRISTKENAEEMRKVENLERRFRLTALRAERGELYHLRATQKISNETLQKLLHDLDLLEALLVEKSG
>NZ_AP017469.1|WP_025798509.1|4071245_4072613_-|NCS2-family-permease
MSSNSSQEGSAGKSGGSLDAYFKISARGSSVRQEVLAGVTTFLAMVYSVIVVPSMLGKAGFPPGAVFVATCLVAAFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQHISIPVALGAVFLMGVLFTLISVTGIRSWILHNLPMGIAHGTGIGIGLFLLLIAANGVGLVIKNPLEGLPVALGAFTSFPVMMSLLGLAIIFGLEKLKVPGGILLVIIGISIVGLIFDPSVKYQGLFALPSLSAADGSSLIFSLDIMGALQPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIISGGKALTADSVSSIVSSFVGASPAAVYIESAAGTAAGGKTGLTATVVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVSKLDFNDFVDAMSGLVCAVFIVLTCNIVTGIMLGFTTLVVGRIFSNEWRKLNVGTVIIAIALVAFYAGGWAI
>NZ_AP017469.1|WP_157743854.1|4072866_4074183_-|guanine-deaminase
MSGQHSLKAIRGNFLDIVKTVEQPEEIESHLRFIEDGLMLLRSGKVEWFGTWQEGKHLIPEGIRVRDYSGKMIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPAERRYNDIEYAREMSAFFIKQLLRNGTTTALVFGTVHPESVDALFEAAHNINMRMIAGKVMMDRNAPDYLLDTAQTSYSQSKALIERWHHNGRLLYAITPRFAPTSTPEQLAMAQRLREEYPDTYLHTHLCENKDEIEWVKALYPERKGYLDVYHHYGLTGKNSVFAHCVHLEESEWDCLRDTGSSIAFCPTSNLYLGSGLFNLRKAWHKQIKVGMGTDIGAGTTFNMLQTLNEAYKVMQLQGWRMSAYEAFYLATLGGAKALGLDGIIGNFNVGKEADFVVLEPTATPLQQLRYDNSVTLMDKLFVMMTLGDDRSIYRTYVDGQLVYERT
>NZ_AP017469.1|WP_096388781.1|4074220_4075609_-|purine-permease
MYHLDDKPPLHEMLIGAVTHLLAIFVPMVAPALIVGTALGLSSEITAYLVSMAMIASGIGTFIQVNRFGRVGSGLLSIQSVNFSFVTVMIALGGSMKKDGLDEQAIISALLGVAFVGAFLVVASSQVLPYLKRVITPTVSGVVVLMIGLSLIKVGIIDFGGGLPAKGDGSFGSYQNLGLGFLVLCVVIGFNCCQNALLRMGGIAIGLIVGYVCALFMGIVDFSPLKDLPIITIPQPFKYGFSFDFHAFLVAATIYLLSILEAVGSITATAIISERPIVGEEYDRRLSGGVLADGLVSVIACALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAAILVILGLFPVIGRFFTTIPAPILGGAMTLMFSMIALAGIKIILCGGMDRRETLIVATALGIGLGVSYDPQIFRVLPDSIYVLFENPICAGGVTAIILNLLIPRVNKRGQEDELEELIKPVTENFTQAK
>NZ_AP017469.1|WP_043488888.1|4075840_4078717_-|molybdopterin-dependent-oxidoreductase-Mo/Fe-S-binding-subunit
MNIRFTLNGTPCTLSCEAGDNVQKVLFNLGLHSVRNSDDGFGFAGSDAIIFDGVVVNASLLIAAQLEGSVVRTAESLGTWNQLSPVQQAMVDVGIVQSGYNDPAAALILTELLERIPSPTRAQIDDALSGLFSRDAGYQQFYQVVELAQARMADPFCQQEIAPEFRDDLQVVGKLCPKVDSAKMVQAKPCYVEDRVPANACIIKMLRSPHPHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALAALALIDVSFEVLKPVMSIDEAMADGAPLVHDEPIVYVNGAPADLEVQNRGSATRGEHMIINFPIGAKPHSNIAAGVHGRIGDVEKGFAQADVVIERTYESTQAQQCPTETHVCFTYMDGERLVIHASTQVPWHVRRQVARLVGLKQNKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVYFHYTREEEFISNTTRHVAKVKVKIGATKEGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVNFQVTTYYSNICPTGAYQGYGAPKGNFALTMALAELAEQLDIDLLDMIELNRVIEGQELKILGAIGEGKMPTSVPTAASCALEPILRKGRELMNWGANKAPQGDWRIGQGVAIIMQKSGIPDIDQANCMVKLESDGTIIVHSGGADIGTGLDTVVTKLTAEVLCCSLADVHVISGDTDHALFDKGAYASSGTCFSGNAAKKAAENLKEKIRFHGAQMLGEPIDDVVIVHPSIVRGKQGEVSFAEIAHKAETGTGFGTLVATACYITPDFAFPFGANFAEVAVNVRTGEIRLDKFYALLDCGTPVNPELALGQIYGASMRAIGHSLTEKLFYDENGSPITRDLQTYGAPKIGDIPRDFRAFLVPSDDRVGPFGAKSISEIGVNGAAPAIATAIHDACGVWLREWHFTPEKILRGLNKLEA
>NZ_AP017469.1|WP_096388585.1|4078718_4079495_-|molybdopterin-dependent-oxidoreductase-FAD-binding-subunit
MIEQFFWPESVKQALELKRQFQDEAVYFGGGSKLNATPTKTTKKFGIALSKLGLDKVSLQQGKLHIGSQATLQRLIDTPLIPDALRHALGFIYSRHLRNQATLAGEIVAKQKERVLLPVLLVLDALVVTAKGETLNLEEYLDNDRDDLLLEVILPDPYQNCSTRKIARSAAGLAVITAAVATGSHGEMKIALDGVSERAIRLRDVESRGLSDDELEKAVSDAISPRADIGGSEAYKRYIAGVVVAELLADCQQMSEEK
>NZ_AP017469.1|WP_025798518.1|4079560_4080889_-|putative-aminohydrolase-SsnA
MLILKNVTAVQFEPAWVQHGIDIAIEGSLIKEVGSQLVAKYPQADVKDMQGKWVMPGIVCAHNHFYSGLSRGIMANIAPSPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTAVIDHHASPNYIAGSLNTLRKGFIKAGLRGMTCFETTDRNGGNKELQAGVEENIAFARLIDNAKKQGSEPYLVEAHIGAHAPFTVSDAGLDMLREAIKATGRGLHIHAAEDSYDVSHSHDKYGKDLIVRLAEHDLIDAKTLVAHGLYLSEADIQIINRQDAFLVHNARSNMNNHVGYNHRIGEYQNVALGTDGIGSDMFEELKFAFFKHRDAGGPMWPDSFTRFLWNGNRLLERNFGAQFGCLAAGYKADLTVCDYPEPTPLAAQNIGGHLAFGMGSGSVRSVMVEGRFVYENGQFPFDVTPIYAEASKVAARLWKRMDDLA
>NZ_AP017469.1|WP_096388586.1|4080891_4083978_-|putative-selenate-reductase-subunit-YgfK
MGDIMRPVPFKELLTRVFDEYNESHSIFGIPEQQFYRKDNDRLIKVFGETCETPMGPAAGPHTQLAQNIIVSWLTGGRFIELKTVQILDRLELDKPCIDAEDECFNTEWSTEFTLQKAHDEYLKAWFVLHLLEALFDPRTQGEAKSFIFNMSVGYNLEGIKQPAMQNFIHSMMDSGQHPKYAEYQSILSHFIREQFESRSAQLSQLPQQIPAQMVHGVTLSTMHGCPPNEIEAICRYMLEEKGLNTFVKLNPTLLGYPRVREILDTCGFDYIGLKEESFEHDLKLEQAISMLQRLTALGQQKQLSFGVKLTNTLGTINHKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASKFNIRDIFDTGIRPITMATDLLKPGGYLRQLECMRELDQSDSWGMTKVDVERLEALAKKAVSMEYTQKHWKAQDHIDAGGPLPMTDCYVAPCVTACAIKQDIPEYIRLLGEQRYADALELIYQRNALPAITGHICDHQCQYNCTRMDYDSALNIRELKKVALEKGWDEYQKRWHKPAGSGSKHPVAVLGAGPAGLSAGYFLARAGYQVTLFEREANAGGVVKNIIPQFRIPAETIQHDIDFVAAHGVKFEFGCDPALTVDKLTQQGFRYVFIGVGTDKNSGVKLAGDNRDVYKSLPFLRSYNRGDKLSLGRHVAVVGAGNTAMDCARAALKVPGVEDVTVIYRRTLNEMPAYREEYEEAVEDGVKFMFLTNPEQFDADGTLTARVMELGEPDEKGRRRPVATDKTIKLRMDALITAIGEQADCAALSAMGVPLNAEGWPAVNAETGETPRPNVFLIGDVQSGPSSIVAAISTARRATDEVLKRENIRTHHSDKQWSNVDPAEIYQRKGAISVLMVDKEEREAFVAQEAQRCLECNYICSKCVDVCPNRANVSIAVPGFHDRFQTLHLDAYCNECGNCAQFCPWQGKPYKDKITIYSLPEDFTNSTNPGFFVDNDNVSVRQGKQIWHLHIDKQGQLDDVPPELEDMCRIISHVHNHHHYLLGRVEV
>NZ_AP017469.1|WP_096388587.1|4084367_4085003_-|NTP-transferase-domain-containing-protein
MMNQKRGKHPYANISPVENLKPRENVDCIITAAGLSSRMGQWKMMLPYKEGTILDSSIENARQFCSRIILVVGYRGDELYDRYNTASDVTVVVNNNYVSGLFSSIQAAGPIVKTDYCFITHGDIPCLNRDIFHQVWLKRGPYALLPCHQGTPGHPVLLPQKIIKRACQDDVSVSSMREFLLAGEYRYLNMPQPQTIMDIDTPEAYQRLLKI
>NZ_AP017469.1|WP_096388588.1|4085034_4085838_+|putative-selenium-dependent-hydroxylase-accessory-protein-YqeC
MNFDLDVLFNDVLSSVKNNKSYLISLIGAGGKTSTLFWLAQRFSQQGLSVLITTTTHMYRPEPSQAQTIIEKEDWHALLTHQKASSSTPKIVALFTEYNAATHKVSGITPEQADMLQAAQLFDVILVEADGAHQQLLKAPAGHEPCIPQSSKCVIALTGGLVINNPADPEQIHRWPIFADLCGIKAGDRLNISVFERFIAHPDGMFKGTPPHALRVWFINRLYQIDNALLGSLTALLKARPELSTIWIGAVQESPPITHQLCQSQTT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP017469_4	4.22\|2792668\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792668-2792699	32	MN855766	Bacteriophage sp. isolate 10, complete genome	24467-24498	0	1.0
NZ_AP017469_4	4.21\|2792608\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792608-2792639	32	MT135176	Aeromonas phage vB_AsoM_yong, complete genome	268-299	1	0.969
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	MT135176	Aeromonas phage vB_AsoM_yong, complete genome	2570-2601	1	0.969
NZ_AP017469_2	2.1\|1065862\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder	1065862-1065893	32	MN855766	Bacteriophage sp. isolate 10, complete genome	27797-27828	2	0.938
NZ_AP017469_2	2.5\|1065863\|31\|NZ_AP017469\|CRT	1065863-1065893	31	MN855766	Bacteriophage sp. isolate 10, complete genome	27797-27827	2	0.935
NZ_AP017469_4	4.22\|2792668\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792668-2792699	32	MN855938	Bacteriophage sp. isolate 495, partial genome	4360-4391	2	0.938
NZ_AP017469_4	4.1\|2791408\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2791408-2791439	32	NZ_CP015380	Hafnia alvei strain HUMV-5920 plasmid unnamed, complete sequence	27014-27045	3	0.906
NZ_AP017469_4	4.25\|2792850\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792850-2792881	32	MN855766	Bacteriophage sp. isolate 10, complete genome	18999-19030	3	0.906
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	120191-120217	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	449087-449113	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	196153-196179	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	199338-199364	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	185528-185554	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	417486-417512	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	185528-185554	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	417486-417512	3	0.889
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	145852-145878	3	0.889
NZ_AP017469_4	4.21\|2792608\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792608-2792639	32	MT843275	Serratia phage vB_SspM_BZS1, complete genome	24676-24707	4	0.875
NZ_AP017469_4	4.21\|2792608\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792608-2792639	32	MN855664	Bacteriophage sp. isolate 275, complete genome	3133-3164	4	0.875
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	351153-351179	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	221647-221673	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	214204-214230	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	220964-220990	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	439224-439250	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	434871-434897	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	424246-424272	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	424246-424272	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	373993-374019	4	0.852
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	380753-380779	4	0.852
NZ_AP017469_4	4.21\|2792608\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792608-2792639	32	NC_016158	Escherichia phage HK639, complete genome	26205-26236	5	0.844
NZ_AP017469_4	4.25\|2792850\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792850-2792881	32	MT135176	Aeromonas phage vB_AsoM_yong, complete genome	43207-43238	5	0.844
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	351258-351284	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	86672-86698	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	214099-214125	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	211581-211607	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	482610-482636	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	439329-439355	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	162621-162647	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	165804-165830	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	424351-424377	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	152004-152030	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	426865-426891	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	424351-424377	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	152004-152030	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	426865-426891	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	380858-380884	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	112329-112355	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	383376-383402	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1171189-1171215	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	54908-54934	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	124319-124345	5	0.815
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	261697-261723	5	0.815
NZ_AP017469_4	4.21\|2792608\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792608-2792639	32	MK047640	Phage NV18, complete genome	29593-29624	6	0.812
NZ_AP017469_4	4.27\|2792970\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792970-2793001	32	NC_015693	Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequence	41037-41068	6	0.812
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NC_010945	Streptococcus phage PH15, complete genome	14322-14353	6	0.812
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	86745-86771	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	120295-120321	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	211476-211502	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	448983-449009	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	482537-482563	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	211396-211422	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	162694-162720	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	196257-196283	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	165877-165903	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	199442-199468	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	152077-152103	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	185640-185666	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	152077-152103	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	185640-185666	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	112402-112428	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	145956-145982	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	383481-383507	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	383561-383587	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1413600-1413626	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	999201-999227	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	125063-125089	6	0.778
NZ_AP017469_8	8.1\|4069219\|27\|NZ_AP017469\|CRISPRCasFinder	4069219-4069245	27	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	924182-924208	6	0.778
NZ_AP017469_4	4.3\|2791528\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791528-2791559	32	NZ_CP041954	Klebsiella pneumoniae strain KP2 plasmid pKP2_8, complete sequence	8555-8586	7	0.781
NZ_AP017469_4	4.3\|2791528\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791528-2791559	32	NZ_CP031139	Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete sequence	10343-10374	7	0.781
NZ_AP017469_4	4.3\|2791528\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791528-2791559	32	NZ_CP032306	Salmonella enterica subsp. enterica serovar Braenderup strain FORC93 plasmid unnamed2, complete sequence	7893-7924	7	0.781
NZ_AP017469_4	4.13\|2792128\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792128-2792159	32	MN693940	Marine virus AFVG_250M588, complete genome	37416-37447	7	0.781
NZ_AP017469_4	4.13\|2792128\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792128-2792159	32	NZ_CP021670	Bacillus licheniformis strain SRCM100141 plasmid pBL141-2 sequence	17795-17826	7	0.781
NZ_AP017469_4	4.13\|2792128\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792128-2792159	32	NZ_CP014843	Bacillus licheniformis strain SCDB 14 plasmid pSCDB14, complete sequence	49699-49730	7	0.781
NZ_AP017469_5	5.2\|2852489\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852489-2852520	32	NZ_CP028161	Lactococcus lactis subsp. lactis strain 14B4 plasmid p14B4, complete sequence	42613-42644	7	0.781
NZ_AP017469_5	5.2\|2852489\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852489-2852520	32	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	219349-219380	7	0.781
NZ_AP017469_6	6.3\|2861316\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2861316-2861347	32	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	208177-208208	7	0.781
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP033799	Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed3, complete sequence	26986-27017	7	0.781
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP022534	Enterobacter hormaechei strain MS7884A plasmid pMS7884B, complete sequence	58139-58170	7	0.781
NZ_AP017469_6	6.20\|2862336\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862336-2862367	32	MK765665	Tortoise microvirus 108 isolate 108_SP_3, complete genome	2244-2275	7	0.781
NZ_AP017469_4	4.2\|2791468\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791468-2791499	32	AP014230	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C91-MedDCM-OCT-S26-C130, * SEQUENCING IN PROGRESS *	15674-15705	8	0.75
NZ_AP017469_4	4.14\|2792188\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792188-2792219	32	MH595538	Vibrio phage BONAISHI, complete genome	116090-116121	8	0.75
NZ_AP017469_4	4.22\|2792668\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792668-2792699	32	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	26770-26801	8	0.75
NZ_AP017469_4	4.22\|2792668\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792668-2792699	32	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	109824-109855	8	0.75
NZ_AP017469_4	4.24\|2792790\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792790-2792821	32	CP016196	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence	113763-113794	8	0.75
NZ_AP017469_6	6.7\|2861556\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2861556-2861587	32	MN536026	Pseudomonas phage vB_Pae-SS2019XI, complete genome	29941-29972	8	0.75
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_KX912253	Enterobacter asburiae strain H162620587 plasmid pJF-587, complete sequence	101582-101613	8	0.75
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP034768	Enterobacter sp. N18-03635 plasmid pFRI-6, complete sequence	5710-5741	8	0.75
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP022141	Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence	38706-38737	8	0.75
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	CP032294	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 plasmid unnamed3, complete sequence	22259-22290	8	0.75
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	CP053317	Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence	74993-75024	8	0.75
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP020054	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0065 plasmid unitig_1, complete sequence	14061-14092	8	0.75
NZ_AP017469_6	6.20\|2862336\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862336-2862367	32	LR597642	Escherichia phage Evi genome assembly, chromosome: 1	15787-15818	8	0.75
NZ_AP017469_6	6.21\|2862396\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862396-2862427	32	KY065473	Streptococcus phage IPP32, complete genome	2995-3026	8	0.75
NZ_AP017469_2	2.7\|1065983\|31\|NZ_AP017469\|CRT	1065983-1066013	31	NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	670653-670683	9	0.71
NZ_AP017469_4	4.2\|2791468\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791468-2791499	32	KC139519	Salmonella phage FSL SP-030, complete genome	31958-31989	9	0.719
NZ_AP017469_4	4.2\|2791468\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791468-2791499	32	KC139514	Salmonella phage FSL SP-039, complete genome	31958-31989	9	0.719
NZ_AP017469_4	4.2\|2791468\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791468-2791499	32	GU169904	Staphylococcus phage SA1, complete genome	5642-5673	9	0.719
NZ_AP017469_4	4.5\|2791648\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791648-2791679	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1250488-1250519	9	0.719
NZ_AP017469_4	4.5\|2791648\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791648-2791679	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1259959-1259990	9	0.719
NZ_AP017469_4	4.5\|2791648\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791648-2791679	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	831017-831048	9	0.719
NZ_AP017469_4	4.22\|2792668\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792668-2792699	32	KT995479	Bacillus phage BM5, complete genome	44909-44940	9	0.719
NZ_AP017469_6	6.1\|2861196\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2861196-2861227	32	GU233956	Bacillus phage 11143, partial sequence	4060-4091	9	0.719
NZ_AP017469_6	6.2\|2861256\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2861256-2861287	32	NZ_CP022549	Sphingorhabdus sp. YGSMI21 plasmid unnamed, complete sequence	35234-35265	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP039192	Piscirickettsia salmonis strain Psal-160 plasmid unnamed2, complete sequence	39186-39217	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038926	Piscirickettsia salmonis strain Psal-011 plasmid unnamed3, complete sequence	28143-28174	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038814	Piscirickettsia salmonis strain Psal-001 plasmid unnamed3, complete sequence	28407-28438	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP006906	Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence	53279-53310	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP033944	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-7, complete sequence	18634-18665	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP033944	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-7, complete sequence	51010-51041	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP013764	Piscirickettsia salmonis strain PM21567A plasmid p2PS2, complete sequence	81319-81350	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP013758	Piscirickettsia salmonis strain AY6492A plasmid p1PS1, complete sequence	20955-20986	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038916	Piscirickettsia salmonis strain Psal-010a plasmid unnamed3, complete sequence	28754-28785	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038970	Piscirickettsia salmonis strain Psal-068 plasmid unnamed3, complete sequence	28385-28416	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP039208	Piscirickettsia salmonis strain Psal-182 plasmid unnamed4, complete sequence	20634-20665	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP039183	Piscirickettsia salmonis strain Psal-158 plasmid unnamed2, complete sequence	29516-29547	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038935	Piscirickettsia salmonis strain Psal-025 plasmid unnamed3, complete sequence	32040-32071	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP012416	Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3, complete sequence	73363-73394	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP039067	Piscirickettsia salmonis strain Psal-107 plasmid unnamed2, complete sequence	29515-29546	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038889	Piscirickettsia salmonis strain Psal-004 plasmid unnamed3, complete sequence	28755-28786	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP039217	Piscirickettsia salmonis strain Psal-104a plasmid unnamed3, complete sequence	26939-26970	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038940	Piscirickettsia salmonis strain Psal-026 plasmid unnamed3, complete sequence	29989-30020	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038879	Piscirickettsia salmonis strain Psal-002 plasmid unnamed3, complete sequence	25708-25739	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	NZ_CP038884	Piscirickettsia salmonis strain Psal-003 plasmid unnamed3, complete sequence	28753-28784	9	0.719
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	MK448707	Streptococcus phage Javan227, complete genome	7810-7841	9	0.719
NZ_AP017469_6	6.18\|2862216\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862216-2862247	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	785594-785625	9	0.719
NZ_AP017469_6	6.19\|2862276\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862276-2862307	32	MN693105	Marine virus AFVG_25M79, complete genome	12224-12255	9	0.719
NZ_AP017469_6	6.20\|2862336\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862336-2862367	32	GU943038	Uncultured phage MedDCM-OCT-S08-C620 genomic sequence	5338-5369	9	0.719
NZ_AP017469_6	6.22\|2862456\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862456-2862487	32	MN694269	Marine virus AFVG_250M1052, complete genome	34855-34886	9	0.719
NZ_AP017469_4	4.7\|2791768\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791768-2791799	32	NZ_CP046705	Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence	226374-226405	10	0.688
NZ_AP017469_4	4.7\|2791768\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2791768-2791799	32	NC_004349	Shewanella oneidensis MR-1 megaplasmid, complete sequence	47099-47130	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024195	Klebsiella pneumoniae isolate KSB1_5D plasmid unnamed4, complete sequence	1423-1454	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP023842	Klebsiella pneumoniae strain 4/1-2 plasmid p4_1_2.3, complete sequence	6512-6543	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP029585	Klebsiella pneumoniae strain DA33140 plasmid pDA33140-9, complete sequence	4426-4457	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	CP052267	Klebsiella pneumoniae strain E16KP0287 plasmid pE16K0287-2, complete sequence	1747-1778	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024044	Klebsiella pneumoniae strain QS17-0029 plasmid pMRSN479404_4.7, complete sequence	989-1020	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024560	Klebsiella pneumoniae strain INF164 plasmid unnamed4, complete sequence	1266-1297	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024532	Klebsiella pneumoniae strain INF157 plasmid unnamed4, complete sequence	3918-3949	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024525	Klebsiella pneumoniae strain INF158 plasmid unnamed4, complete sequence	3175-3206	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024553	Klebsiella pneumoniae strain INF163 plasmid unnamed4, complete sequence	3364-3395	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024574	Klebsiella pneumoniae strain INF274 plasmid unnamed4, complete sequence	2868-2899	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024574	Klebsiella pneumoniae strain INF274 plasmid unnamed4, complete sequence	7539-7570	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP021700	Klebsiella pneumoniae strain AR_0158 plasmid tig00003569alt, complete sequence	7462-7493	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP024567	Klebsiella pneumoniae strain INF278 plasmid unnamed4, complete sequence	2553-2584	10	0.688
NZ_AP017469_5	5.3\|2852549\|32\|NZ_AP017469\|CRISPRCasFinder,CRT	2852549-2852580	32	NZ_CP033778	Klebsiella pneumoniae strain FDAARGOS_531 plasmid unnamed4	888-919	10	0.688
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	MN693308	Marine virus AFVG_25M475, complete genome	12950-12981	10	0.688
NZ_AP017469_6	6.16\|2862096\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862096-2862127	32	MN693437	Marine virus AFVG_25M476, complete genome	12942-12973	10	0.688
NZ_AP017469_6	6.18\|2862216\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862216-2862247	32	NC_016037	Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence	63246-63277	10	0.688
NZ_AP017469_6	6.20\|2862336\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862336-2862367	32	NZ_CP014491	Escherichia coli strain G749 plasmid pG749_3, complete sequence	6414-6445	10	0.688
NZ_AP017469_6	6.20\|2862336\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862336-2862367	32	NZ_CP014491	Escherichia coli strain G749 plasmid pG749_3, complete sequence	6726-6757	10	0.688
NZ_AP017469_6	6.21\|2862396\|32\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862396-2862427	32	KT339177	Lactococcus phage GE1, complete genome	19389-19420	10	0.688
NZ_AP017469_6	6.23\|2862516\|33\|NZ_AP017469\|PILER-CR,CRISPRCasFinder,CRT	2862516-2862548	33	AP014693	Ralstonia phage RSL2 DNA, complete sequence	188860-188892	10	0.697
NZ_AP017469_4	4.27\|2792970\|32\|NZ_AP017469\|CRISPRCasFinder,CRT,PILER-CR	2792970-2793001	32	MN693492	Marine virus AFVG_25M361, complete genome	7468-7499	11	0.656

1. spacer 4.22|2792668|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MN855766 (Bacteriophage sp. isolate 10, complete genome) position: , mismatch: 0, identity: 1.0

cgtatgtatccgcaacaacaatcatttcaccg	CRISPR spacer
cgtatgtatccgcaacaacaatcatttcaccg	Protospacer
********************************

2. spacer 4.21|2792608|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MT135176 (Aeromonas phage vB_AsoM_yong, complete genome) position: , mismatch: 1, identity: 0.969

ggcatacatgggcgagctggttagttcaagct	CRISPR spacer
ggcatacatgggcgagctggttagttcaggct	Protospacer
****************************.***

3. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to MT135176 (Aeromonas phage vB_AsoM_yong, complete genome) position: , mismatch: 1, identity: 0.969

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
tccacgcttatctctgcattaattcagcgcga	Protospacer
***************************** **

4. spacer 2.1|1065862|32|NZ_AP017469|PILER-CR,CRISPRCasFinder matches to MN855766 (Bacteriophage sp. isolate 10, complete genome) position: , mismatch: 2, identity: 0.938

tttggtcggtgcgccaatcttccagaagttaa	CRISPR spacer
tcttgtcggtgcgccaatcttccagaagttaa	Protospacer
*.* ****************************

5. spacer 2.5|1065863|31|NZ_AP017469|CRT matches to MN855766 (Bacteriophage sp. isolate 10, complete genome) position: , mismatch: 2, identity: 0.935

ttggtcggtgcgccaatcttccagaagttaa	CRISPR spacer
cttgtcggtgcgccaatcttccagaagttaa	Protospacer
.* ****************************

6. spacer 4.22|2792668|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MN855938 (Bacteriophage sp. isolate 495, partial genome) position: , mismatch: 2, identity: 0.938

cgtatgtatccgcaacaacaatcatttcaccg	CRISPR spacer
cgtaagtatccgcaacaacaatcatttcacct	Protospacer
**** **************************

7. spacer 4.1|2791408|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP015380 (Hafnia alvei strain HUMV-5920 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

ggtgtgttgcgttgtgtttccataccgactat	CRISPR spacer
agtgtgttgcgttgtgtttccatacagcctat	Protospacer
.************************ * ****

8. spacer 4.25|2792850|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MN855766 (Bacteriophage sp. isolate 10, complete genome) position: , mismatch: 3, identity: 0.906

ctgtcccagagaattaccgcaggccactgata	CRISPR spacer
ctgtcccagagaattacctcaggccactcatg	Protospacer
****************** ********* **.

9. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

10. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

11. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

12. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

13. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

14. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggagggt	Protospacer
*** ***.***************** *

15. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

16. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggagggt	Protospacer
*** ***.***************** *

17. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

18. spacer 4.21|2792608|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 4, identity: 0.875

ggcatacatgggcgagctggttagttcaagct	CRISPR spacer
gacacacatgggcgagctggttaattcaagca	Protospacer
*.**.******************.*******

19. spacer 4.21|2792608|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MN855664 (Bacteriophage sp. isolate 275, complete genome) position: , mismatch: 4, identity: 0.875

ggcatacatgggcgagctggttagttcaagct	CRISPR spacer
ggcatacatgggcaagctggttaattcagtct	Protospacer
*************.*********.****. **

20. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

21. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactcctccccctgcgaagcgggggga	Protospacer
******************* **.**

22. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

23. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggaaggt	Protospacer
*** ***.***************.* *

24. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

25. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggaaggt	Protospacer
*** ***.***************.* *

26. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

27. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

28. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggaaggt	Protospacer
*** ***.***************.* *

29. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

30. spacer 4.21|2792608|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 5, identity: 0.844

ggcatacatgggcgagctggttagttcaagct	CRISPR spacer
ggcatacctgggcgagctggttaattcagtcc	Protospacer
******* ***************.****. *.

31. spacer 4.25|2792850|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MT135176 (Aeromonas phage vB_AsoM_yong, complete genome) position: , mismatch: 5, identity: 0.844

ctgtcccagagaattaccgcaggccactgata	CRISPR spacer
ctgtcccagaggattaccgcaggccaccaagc	Protospacer
***********.***************..*

32. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

33. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

34. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

35. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggc	Protospacer
*.****..***************** .

36. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

37. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

38. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

39. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

40. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

41. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

42. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctccctcccctgcgaaggggagggt	Protospacer
 .****..***************** *

43. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

44. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

45. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctccctcccctgcgaaggggagggt	Protospacer
 .****..***************** *

46. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

47. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

48. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggc	Protospacer
*.****..***************** .

49. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

50. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

51. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

52. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

53. spacer 4.21|2792608|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 6, identity: 0.812

ggcatacatgggcgagctggttagttcaagct	CRISPR spacer
gccacacatgggcgagctggttaattcagtcc	Protospacer
* **.******************.****. *.

54. spacer 4.27|2792970|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NC_015693 (Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequence) position: , mismatch: 6, identity: 0.812

tgtaaggagtggaatatggc-tttagggcgtgt	CRISPR spacer
tgtaaggggtggaatatggcgtttgaggcagg-	Protospacer
*******.************ ***..***. *

55. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NC_010945 (Streptococcus phage PH15, complete genome) position: , mismatch: 6, identity: 0.812

cgtta-gtgccagaatttttaaaaacagcagat	CRISPR spacer
-atgacatgccagaatttttaaaaaaaggagat	Protospacer
 .* * .****************** ** ****

56. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

57. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

58. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctcctccccctgcgaagggggaggc	Protospacer
..********************..* .

59. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

60. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

61. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctcaccctgcgaaggggtggga	Protospacer
 .****** ************* **

62. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

63. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

64. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

65. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

66. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

67. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

68. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

69. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

70. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

71. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

72. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctcctccccctgcgaagggggaggc	Protospacer
..********************..* .

73. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctcaccctgcgaaggggtggga	Protospacer
 .****** ************* **

74. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggga	Protospacer
  ***************** **.**

75. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggag	Protospacer
  ***************** **.**

76. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggga	Protospacer
  ***************** **.**

77. spacer 8.1|4069219|27|NZ_AP017469|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggga	Protospacer
  ***************** **.**

78. spacer 4.3|2791528|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041954 (Klebsiella pneumoniae strain KP2 plasmid pKP2_8, complete sequence) position: , mismatch: 7, identity: 0.781

---cggactaatagccgcgttaggtaaaacaactt	CRISPR spacer
gtatggac---aagctgggttaggtaaaacaactt	Protospacer
   .****    ***.* *****************

79. spacer 4.3|2791528|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031139 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete sequence) position: , mismatch: 7, identity: 0.781

---cggactaatagccgcgttaggtaaaacaactt	CRISPR spacer
gtatggac---aagctgggttaggtaaaacaactt	Protospacer
   .****    ***.* *****************

80. spacer 4.3|2791528|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032306 (Salmonella enterica subsp. enterica serovar Braenderup strain FORC93 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

---cggactaatagccgcgttaggtaaaacaactt	CRISPR spacer
gtatggac---aagctgggttaggtaaaacaactt	Protospacer
   .****    ***.* *****************

81. spacer 4.13|2792128|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MN693940 (Marine virus AFVG_250M588, complete genome) position: , mismatch: 7, identity: 0.781

gttattacgattgcattaaagatcgcatggtt	CRISPR spacer
gttattacaattgcattaaagatagctggaag	Protospacer
********.************** **  *.

82. spacer 4.13|2792128|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021670 (Bacillus licheniformis strain SRCM100141 plasmid pBL141-2 sequence) position: , mismatch: 7, identity: 0.781

gttattacgattgcattaaagatcgcatggtt----	CRISPR spacer
gttattaggattgcattaaggat----tggtccaga	Protospacer
******* ***********.***    ****.

83. spacer 4.13|2792128|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014843 (Bacillus licheniformis strain SCDB 14 plasmid pSCDB14, complete sequence) position: , mismatch: 7, identity: 0.781

gttattacgattgcattaaagatcgcatggtt----	CRISPR spacer
gttattaggattgcattaaggat----tggtccaga	Protospacer
******* ***********.***    ****.

84. spacer 5.2|2852489|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP028161 (Lactococcus lactis subsp. lactis strain 14B4 plasmid p14B4, complete sequence) position: , mismatch: 7, identity: 0.781

ataaatcataagatgtataattgattgaaata---	CRISPR spacer
ttaaatcataagaagtataaatga---aattacct	Protospacer
 ************ ****** ***   ** **

85. spacer 5.2|2852489|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 7, identity: 0.781

----ataaatcataagatgtataattgattgaaata	CRISPR spacer
tattataga----aagatgtatatttgatggaaata	Protospacer
    ***.*    ********** ***** ******

86. spacer 6.3|2861316|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 7, identity: 0.781

cgacacagggcgtggcgctggattcgatgctc	CRISPR spacer
tgccgccgagcgtggcgccggatgcgatgctc	Protospacer
.* *.* *.*********.**** ********

87. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033799 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgtagtgccagtattcttaaaaacaggcgag	Protospacer
*  ********* ***.**********  **

88. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022534 (Enterobacter hormaechei strain MS7884A plasmid pMS7884B, complete sequence) position: , mismatch: 7, identity: 0.781

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgtagtgccagtattcttaaaaacaggcgag	Protospacer
*  ********* ***.**********  **

89. spacer 6.20|2862336|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MK765665 (Tortoise microvirus 108 isolate 108_SP_3, complete genome) position: , mismatch: 7, identity: 0.781

tgatttttatgtttactgtttattgcaatatt	CRISPR spacer
tgatttttatatttaatgtttattgcccccgt	Protospacer
**********.**** **********  .  *

90. spacer 4.2|2791468|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to AP014230 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C91-MedDCM-OCT-S26-C130, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tcacgtcagttaaatacggcgttcctgatgtt	CRISPR spacer
ttggttcttttaaatacggagttcttgatgtt	Protospacer
*..  **  ********** ****.*******

91. spacer 4.14|2792188|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MH595538 (Vibrio phage BONAISHI, complete genome) position: , mismatch: 8, identity: 0.75

atgatgcgcgatttggacgcactgcgtttcat	CRISPR spacer
ctgatgcgcgatttaaacgcactgcatcgccc	Protospacer
 *************..*********.*. * .

92. spacer 4.22|2792668|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 8, identity: 0.75

cgtatgtatccgcaacaacaatcatttcaccg	CRISPR spacer
cgacattttctgcaacagcaatcatttcacca	Protospacer
**    * **.******.*************.

93. spacer 4.22|2792668|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 8, identity: 0.75

cgtatgtatccgcaacaacaatcatttcaccg	CRISPR spacer
cgacattttctgcaacagcaatcatttcacca	Protospacer
**    * **.******.*************.

94. spacer 4.24|2792790|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to CP016196 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttactttgtattcgccgacttcacgaatggca	CRISPR spacer
ttgagttgtattcgccgaattcacgtataaaa	Protospacer
**.  ************* ****** **.. *

95. spacer 6.7|2861556|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MN536026 (Pseudomonas phage vB_Pae-SS2019XI, complete genome) position: , mismatch: 8, identity: 0.75

tcgcgagagttgatttcgatgccgtataggac	CRISPR spacer
tggcgagagttgtttgcgatgccgtgatgaaa	Protospacer
* ********** ** *********.  *.*

96. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX912253 (Enterobacter asburiae strain H162620587 plasmid pJF-587, complete sequence) position: , mismatch: 8, identity: 0.75

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgcagtgccagtattcttaaaaacaggcgag	Protospacer
*  .******** ***.**********  **

97. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034768 (Enterobacter sp. N18-03635 plasmid pFRI-6, complete sequence) position: , mismatch: 8, identity: 0.75

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgcagtgccagtattcttaaaaacaggcgag	Protospacer
*  .******** ***.**********  **

98. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022141 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgcagtgccagtattcttaaaaacaggcgag	Protospacer
*  .******** ***.**********  **

99. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to CP032294 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgcagtgccagtattcttaaaaacaggcgag	Protospacer
*  .******** ***.**********  **

100. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to CP053317 (Salmonella enterica subsp. salamae serovar 6,8:a:z52 strain 62-3163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgcagtgccagtattcttaaaaacaggcgag	Protospacer
*  .******** ***.**********  **

101. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020054 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0065 plasmid unitig_1, complete sequence) position: , mismatch: 8, identity: 0.75

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ccgcagtgccagtattcttaaaaacaggcgag	Protospacer
*  .******** ***.**********  **

102. spacer 6.20|2862336|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to LR597642 (Escherichia phage Evi genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.75

tgatttttatgtttactgtttattgcaatatt	CRISPR spacer
tgatttttttgtttgctgtttattaaaaacac	Protospacer
******** *****.*********. **   .

103. spacer 6.21|2862396|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to KY065473 (Streptococcus phage IPP32, complete genome) position: , mismatch: 8, identity: 0.75

tctgatttttcgtttagatgctccatgatatt	CRISPR spacer
gatgatttttcgtctagttgctccatcgagtt	Protospacer
  ***********.*** ******** . .**

104. spacer 2.7|1065983|31|NZ_AP017469|CRT matches to NZ_CP042825 (Rhizobium sp. WL3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

atgctaggccaaggatttcgccttgtctcat	CRISPR spacer
cgaaaaatccgaggatttcgccttgtctcac	Protospacer
  .  *. **.*******************.

105. spacer 4.2|2791468|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to KC139519 (Salmonella phage FSL SP-030, complete genome) position: , mismatch: 9, identity: 0.719

tcacgtcagttaaatacggcgttcctgatgtt	CRISPR spacer
caacgtcagataaagacggcgttcctatcgcg	Protospacer
. ******* **** ***********. .*.

106. spacer 4.2|2791468|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to KC139514 (Salmonella phage FSL SP-039, complete genome) position: , mismatch: 9, identity: 0.719

tcacgtcagttaaatacggcgttcctgatgtt	CRISPR spacer
caacgtcagataaagacggcgttcctatcgcg	Protospacer
. ******* **** ***********. .*.

107. spacer 4.2|2791468|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to GU169904 (Staphylococcus phage SA1, complete genome) position: , mismatch: 9, identity: 0.719

tcacgtcagttaaatacggcgttcctgatgtt	CRISPR spacer
caacgtcagataaagacggcgttcctatcgcg	Protospacer
. ******* **** ***********. .*.

108. spacer 4.5|2791648|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgtcagcggttcgtctctgtggccattt	CRISPR spacer
ttcgacattgcggttcgtctctgtggcgtttt	Protospacer
 * *   . ******************  ***

109. spacer 4.5|2791648|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgtcagcggttcgtctctgtggccattt	CRISPR spacer
ttcgacattgcggttcgtctctgtggcgtttt	Protospacer
 * *   . ******************  ***

110. spacer 4.5|2791648|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 9, identity: 0.719

atggtgtcagcggttcgtctctgtggccattt	CRISPR spacer
ttcgacattgcggttcgtctctgtggcgtttt	Protospacer
 * *   . ******************  ***

111. spacer 4.22|2792668|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to KT995479 (Bacillus phage BM5, complete genome) position: , mismatch: 9, identity: 0.719

cgtatgtatccgcaacaacaatcatttcaccg	CRISPR spacer
ttgctaattccgcaacagcaatcattttaccg	Protospacer
.   *.  *********.*********.****

112. spacer 6.1|2861196|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to GU233956 (Bacillus phage 11143, partial sequence) position: , mismatch: 9, identity: 0.719

----cttggaaaaaacaagtaaatgcatctatggat	CRISPR spacer
atatttt----aaatcaagtaaatgaatctatggta	Protospacer
    .**    *** ********** ********

113. spacer 6.2|2861256|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022549 (Sphingorhabdus sp. YGSMI21 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttctatcgcgtaggtttcgcgcttttgatac	CRISPR spacer
attgatccgcgtttgtttcgcgcttttgatgt	Protospacer
.**   .*****  ****************..

114. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039192 (Piscirickettsia salmonis strain Psal-160 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

115. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038926 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

116. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038814 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

117. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006906 (Clostridium baratii str. Sullivan plasmid pCBJ, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
atgaagtgccagaaattttaaaagcagctcaa	Protospacer
    ********** ********.****  *

118. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033944 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-7, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

119. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033944 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-7, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

120. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013764 (Piscirickettsia salmonis strain PM21567A plasmid p2PS2, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

121. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013758 (Piscirickettsia salmonis strain AY6492A plasmid p1PS1, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

122. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038916 (Piscirickettsia salmonis strain Psal-010a plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

123. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038970 (Piscirickettsia salmonis strain Psal-068 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

124. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039208 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

125. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039183 (Piscirickettsia salmonis strain Psal-158 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

126. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038935 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

127. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012416 (Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

128. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039067 (Piscirickettsia salmonis strain Psal-107 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

129. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038889 (Piscirickettsia salmonis strain Psal-004 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

130. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039217 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

131. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038940 (Piscirickettsia salmonis strain Psal-026 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

132. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038879 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

133. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038884 (Piscirickettsia salmonis strain Psal-003 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
caacttagccaaaatttttacaaacagcagaa	Protospacer
*. .   ****.******** **********

134. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MK448707 (Streptococcus phage Javan227, complete genome) position: , mismatch: 9, identity: 0.719

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
tcttgtcaccagaatttttaaaacaagcagaa	Protospacer
. **. ..***************  ******

135. spacer 6.18|2862216|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagtgcataaaaaagcccctgcatatattga	CRISPR spacer
taatcaaataaaaaagcccctgaataaattca	Protospacer
. * .. *************** *** *** *

136. spacer 6.19|2862276|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MN693105 (Marine virus AFVG_25M79, complete genome) position: , mismatch: 9, identity: 0.719

ttaaactgttgctgctataatgcaagccaaaa	CRISPR spacer
taatttaactgctgcaataatgcaaaccaaaa	Protospacer
* *  . ..****** *********.******

137. spacer 6.20|2862336|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to GU943038 (Uncultured phage MedDCM-OCT-S08-C620 genomic sequence) position: , mismatch: 9, identity: 0.719

tgatttttatgtttactgtttattgcaatatt	CRISPR spacer
tttattttatgtttaatgtttattccaccagc	Protospacer
*   *********** ******** ** .* .

138. spacer 6.22|2862456|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MN694269 (Marine virus AFVG_250M1052, complete genome) position: , mismatch: 9, identity: 0.719

gtttaatgcctggatagccatctgctcatggt	CRISPR spacer
tactaatccctggagagccatctgctgttcgg	Protospacer
  .**** ****** ***********  * *

139. spacer 4.7|2791768|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046705 (Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence) position: , mismatch: 10, identity: 0.688

ttcgcttgctcaaaacaaatgactaatatttt	CRISPR spacer
tgtccttgctaaacacaaatgactaatgacgg	Protospacer
* . ****** ** *************. .

140. spacer 4.7|2791768|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to NC_004349 (Shewanella oneidensis MR-1 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ttcgcttgctcaaaacaaatgactaatatttt	CRISPR spacer
cattcggaatcataacaaatgcctaatatttt	Protospacer
. . *  . *** ******** **********

141. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024195 (Klebsiella pneumoniae isolate KSB1_5D plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

142. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP023842 (Klebsiella pneumoniae strain 4/1-2 plasmid p4_1_2.3, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

143. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP029585 (Klebsiella pneumoniae strain DA33140 plasmid pDA33140-9, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

144. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to CP052267 (Klebsiella pneumoniae strain E16KP0287 plasmid pE16K0287-2, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

145. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024044 (Klebsiella pneumoniae strain QS17-0029 plasmid pMRSN479404_4.7, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

146. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024560 (Klebsiella pneumoniae strain INF164 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

147. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024532 (Klebsiella pneumoniae strain INF157 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

148. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024525 (Klebsiella pneumoniae strain INF158 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

149. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024553 (Klebsiella pneumoniae strain INF163 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

150. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024574 (Klebsiella pneumoniae strain INF274 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

151. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024574 (Klebsiella pneumoniae strain INF274 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

152. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP021700 (Klebsiella pneumoniae strain AR_0158 plasmid tig00003569alt, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

153. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP024567 (Klebsiella pneumoniae strain INF278 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

154. spacer 5.3|2852549|32|NZ_AP017469|CRISPRCasFinder,CRT matches to NZ_CP033778 (Klebsiella pneumoniae strain FDAARGOS_531 plasmid unnamed4) position: , mismatch: 10, identity: 0.688

tccacgcttatctctgcattaattcagcgaga	CRISPR spacer
atagcatccatctctgcatgaattgagcgaga	Protospacer
 . .*....********** **** *******

155. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MN693308 (Marine virus AFVG_25M475, complete genome) position: , mismatch: 10, identity: 0.688

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ttgaagtgccacaattttttaaaacaggcgca	Protospacer
.   ******* ******* *******  *

156. spacer 6.16|2862096|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to MN693437 (Marine virus AFVG_25M476, complete genome) position: , mismatch: 10, identity: 0.688

cgttagtgccagaatttttaaaaacagcagat	CRISPR spacer
ttgaagtgccacaattttttaaaacaggcgca	Protospacer
.   ******* ******* *******  *

157. spacer 6.18|2862216|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NC_016037 (Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence) position: , mismatch: 10, identity: 0.688

ccagtgcataaaaaagcccctgcatatattga	CRISPR spacer
gtcctcttgaaaaaagccgctgcatataatga	Protospacer
 .  * .  ********* ********* ***

158. spacer 6.20|2862336|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014491 (Escherichia coli strain G749 plasmid pG749_3, complete sequence) position: , mismatch: 10, identity: 0.688

tgatttttatgtttactgtttattgcaatatt	CRISPR spacer
tgatttttatgttctctgtttatgttctcgta	Protospacer
*************. ********  .  ..*

159. spacer 6.20|2862336|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014491 (Escherichia coli strain G749 plasmid pG749_3, complete sequence) position: , mismatch: 10, identity: 0.688

tgatttttatgtttactgtttattgcaatatt	CRISPR spacer
tgatttttatgttctctgtttatgttctcgta	Protospacer
*************. ********  .  ..*

160. spacer 6.21|2862396|32|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to KT339177 (Lactococcus phage GE1, complete genome) position: , mismatch: 10, identity: 0.688

tctgatttttcgtttagatgctccatgatatt	CRISPR spacer
gttgattttttgtttagatgctacaccactag	Protospacer
 .********.*********** **. *.

161. spacer 6.23|2862516|33|NZ_AP017469|PILER-CR,CRISPRCasFinder,CRT matches to AP014693 (Ralstonia phage RSL2 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

tgaatcatttaaaattcctaatggatgggttga	CRISPR spacer
tgaaccatttaaaattcctattggggatatgac	Protospacer
****.*************** ***. . .* .

162. spacer 4.27|2792970|32|NZ_AP017469|CRISPRCasFinder,CRT,PILER-CR matches to MN693492 (Marine virus AFVG_25M361, complete genome) position: , mismatch: 11, identity: 0.656

tgtaaggagtggaatatggctttagggcgtgt	CRISPR spacer
cataaggagtagattatggctttagatttaag	Protospacer
..********.** ***********. .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

823660 : 833870

uncultured_Mediterranean_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025801558.1\|823660_824422_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.9e-66	50.8
WP_025801557.1\|824415_825048_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.5e-36	51.5
WP_025801556.1\|825455_826433_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.6e-05	35.2
WP_025801555.1\|826485_827472_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.0e-31	37.0
WP_096386430.1\|827546_830105_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.7e-25	20.5
WP_157743835.1\|830369_833870_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	9.1e-99	54.2

DBSCAN-SWA_2

1599519 : 1611080

Escherichia_phage(62.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096387058.1\|1599519_1600863_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	4.8e-80	41.0
WP_025800951.1\|1600971_1602264_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.1e-92	43.8
WP_043492488.1\|1602747_1605192_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-213	49.1
WP_025800953.1\|1605202_1605823_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	59.6
WP_096387061.1\|1605824_1606685_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.6e-26	36.0
WP_096387064.1\|1606798_1607413_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	1.9e-28	39.2
WP_096387067.1\|1607412_1608000_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	1.1e-25	37.4
WP_043492326.1\|1608116_1609256_+	MFS transporter	NA	NA	NA	NA
WP_025800958.1\|1609331_1609787_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_025800959.1\|1610339_1611080_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5

DBSCAN-SWA_3

1681374 : 1757049

uncultured_Caudovirales_phage(40.0%)

plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172863863.1\|1681374_1683120_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_025801009.1\|1683328_1683787_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_025801010.1\|1683922_1684978_-	porin OmpA	NA	NA	NA	NA
WP_025801011.1\|1685335_1685845_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_096387125.1\|1686066_1686690_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_096387128.1\|1686776_1688912_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_025801014.1\|1688923_1689370_-	YccF domain-containing protein	NA	NA	NA	NA
WP_096387131.1\|1689580_1691635_+	DNA helicase IV	A7KV33	Bacillus_phage	3.2e-19	27.0
WP_043492573.1\|1691679_1692138_-	methylglyoxal synthase	NA	NA	NA	NA
WP_096387134.1\|1692242_1692752_-	DUF2057 family protein	NA	NA	NA	NA
WP_096387137.1\|1692953_1693370_+	CoA-binding protein	NA	NA	NA	NA
WP_025801019.1\|1693426_1693747_-	heat shock protein HspQ	NA	NA	NA	NA
WP_040045938.1\|1693904_1695098_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_043492578.1\|1695206_1695485_+	acylphosphatase	NA	NA	NA	NA
WP_025801022.1\|1695485_1695815_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_008813056.1\|1696000_1696663_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	8.1e-41	48.1
WP_172863837.1\|1697817_1706214_+	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA
WP_043492603.1\|1706376_1707372_-	glutaminase A	NA	NA	NA	NA
WP_096387143.1\|1709057_1709375_-	DUF4387 domain-containing protein	NA	NA	NA	NA
WP_025802701.1\|1709371_1710745_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA
WP_025802703.1\|1710746_1711991_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
WP_025802707.1\|1711990_1713436_-	methylaspartate mutase subunit E	NA	NA	NA	NA
WP_096387146.1\|1713450_1714842_-	glutamate mutase L	NA	NA	NA	NA
WP_025802711.1\|1714838_1715285_-	methylaspartate mutase subunit S	NA	NA	NA	NA
WP_096387149.1\|1715887_1716748_-	GHMP kinase	NA	NA	NA	NA
WP_096387152.1\|1716834_1717617_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_096387154.1\|1718368_1719904_+	cobyric acid synthase	NA	NA	NA	NA
WP_096387157.1\|1719929_1720688_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_096387160.1\|1720710_1721775_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_025802722.1\|1721807_1722731_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_096387163.1\|1722892_1724539_+	fumarate hydratase	NA	NA	NA	NA
WP_096387166.1\|1724555_1725146_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_043492645.1\|1725710_1726355_+	hypothetical protein	NA	NA	NA	NA
WP_025802730.1\|1727324_1727825_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_038502127.1\|1727850_1729404_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_096387169.1\|1729422_1730772_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_096387171.1\|1730768_1731428_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_096387174.1\|1731440_1733150_+	OmpA family protein	NA	NA	NA	NA
WP_025802740.1\|1733237_1733729_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_096387177.1\|1733936_1736687_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	3.4e-93	33.4
WP_096387180.1\|1736680_1739191_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.4e-21	35.4
WP_096387183.1\|1739394_1740198_+	hypothetical protein	NA	NA	NA	NA
WP_096388729.1\|1740252_1741056_+	hypothetical protein	NA	NA	NA	NA
WP_096388730.1\|1741110_1741914_+	hypothetical protein	NA	NA	NA	NA
WP_096387186.1\|1741971_1742748_+	hypothetical protein	NA	NA	NA	NA
WP_096387189.1\|1742803_1743559_+	hypothetical protein	NA	NA	NA	NA
WP_096387192.1\|1743602_1744376_+	hypothetical protein	NA	NA	NA	NA
WP_096387195.1\|1744530_1746516_+	hypothetical protein	A0A077K801	Ralstonia_phage	3.8e-49	29.0
WP_096387198.1\|1746521_1746782_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_096387201.1\|1746781_1748230_+	hypothetical protein	NA	NA	NA	NA
WP_096387204.1\|1748252_1751597_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_061554280.1\|1751596_1753189_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_096387207.1\|1753266_1755030_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_096387210.1\|1754993_1756079_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_096387213.1\|1756059_1756608_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_043492680.1\|1756611_1757049_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

2131072 : 2144972

Tupanvirus(22.22%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025801264.1\|2131072_2133010_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.6e-129	37.7
WP_025801265.1\|2133005_2133548_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	8.8e-17	33.7
WP_025801266.1\|2133646_2133844_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_004089950.1\|2133886_2134243_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_121626058.1\|2134373_2134418_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_025801267.1\|2134709_2135693_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	1.7e-34	38.0
WP_096387509.1\|2135707_2138095_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	6.6e-08	28.9
WP_004089944.1\|2138099_2138396_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	3.2e-13	40.0
WP_025801269.1\|2138479_2138677_+	protein DsrB	NA	NA	NA	NA
WP_096387511.1\|2138735_2139761_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_080723944.1\|2139763_2140549_+	vitamin B12 ABC transporter ATP-binding protein BtuD	W5SAS9	Pithovirus	2.7e-06	26.1
WP_025801272.1\|2140832_2141981_+	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	C7U074	Ostreococcus_tauri_virus	1.2e-23	27.8
WP_040045172.1\|2142012_2142990_+	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	A8CG95	Salmonella_phage	1.5e-38	33.9
WP_096387513.1\|2142989_2144972_+	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	A0A2K9KZK0	Tupanvirus	9.6e-21	25.4

DBSCAN-SWA_5

2497968 : 2555289

Enterobacteria_phage(24.32%)

plate,tRNA,terminase,head,capsid,portal,tail,integrase,lysis

attL 2501067:2501081|attR 2536325:2536339

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072309757.1\|2497968_2499237_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.1e-166	67.7
WP_072309758.1\|2499236_2499656_-	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	2.2e-39	58.8
WP_072309760.1\|2500526_2501072_+	hypothetical protein	NA	NA	NA	NA
2501067:2501081	attL	NA	NA	NA	NA
WP_157743844.1\|2501090_2501606_-\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	1.9e-29	40.6
WP_096387768.1\|2501613_2503278_-\|tail	phage tail protein	S4TP62	Salmonella_phage	8.1e-29	26.7
WP_096387770.1\|2503270_2503822_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	8.3e-31	39.0
WP_096387772.1\|2503814_2504729_-\|plate	baseplate J/gp47 family protein	D5LGZ3	Escherichia_phage	4.5e-66	45.7
WP_096387774.1\|2504712_2505063_-	GPW/gp25 family protein	D4HTV2	Vibrio_phage	2.1e-24	52.3
WP_096387776.1\|2505096_2506221_-	late control protein D	R9TNM7	Vibrio_phage	2.2e-38	34.1
WP_096387778.1\|2506223_2506439_-\|tail	tail protein X	R9TR63	Vibrio_phage	2.8e-11	52.9
WP_096387780.1\|2506413_2506890_-\|tail	phage tail protein	D4HTW5	Vibrio_phage	1.7e-16	36.3
WP_096387782.1\|2509007_2509304_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_046360401.1\|2509358_2509865_-\|tail	phage major tail tube protein	A0A1B2LRS4	Wolbachia_phage	2.9e-14	32.7
WP_166493271.1\|2509864_2511328_-\|tail	phage tail sheath subtilisin-like domain-containing protein	K4HZC3	Acidithiobacillus_phage	5.5e-74	37.1
WP_096387786.1\|2511364_2511979_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	7.9e-14	37.9
WP_096387788.1\|2511971_2512511_-	hypothetical protein	R9TNK0	Vibrio_phage	6.9e-14	29.0
WP_166493272.1\|2512519_2513179_-	hypothetical protein	R9TR34	Vibrio_phage	3.3e-18	35.2
WP_096387790.1\|2513180_2513555_-	hypothetical protein	NA	NA	NA	NA
WP_096387792.1\|2513562_2513946_-	hypothetical protein	K7P7M3	Enterobacteria_phage	3.4e-07	32.6
WP_096387794.1\|2513983_2515021_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.2e-132	68.2
WP_096387795.1\|2515096_2515423_-\|head	head decoration protein	E4WL24	Enterobacteria_phage	2.1e-29	60.4
WP_096387796.1\|2515433_2516726_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	5.2e-124	58.2
WP_096387798.1\|2516712_2518308_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.3e-225	73.2
WP_072307257.1\|2518304_2518511_-	gpW family protein	K7PM10	Enterobacteria_phage	8.4e-13	53.8
WP_096387800.1\|2518512_2520429_-\|terminase	phage terminase large subunit family protein	K7PGW7	Enterobacteria_phage	6.6e-293	74.0
WP_096387802.1\|2520400_2520901_-\|terminase	terminase small subunit	O64316	Escherichia_phage	3.7e-62	73.2
WP_072307254.1\|2521113_2521551_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046459177.1\|2522080_2522329_+	DUF883 family protein	NA	NA	NA	NA
WP_096388758.1\|2522982_2523429_-\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	3.5e-19	39.9
WP_166493273.1\|2523449_2523977_-	glycoside hydrolase family protein	K7PLY1	Enterobacteria_phage	6.9e-67	68.0
WP_096387806.1\|2523976_2524246_-\|lysis	lysis protein	Q7Y3V4	Yersinia_phage	1.2e-14	45.3
WP_072308778.1\|2524783_2525077_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_155403083.1\|2525174_2525333_+	hypothetical protein	NA	NA	NA	NA
WP_072308777.1\|2525435_2525669_-	hypothetical protein	NA	NA	NA	NA
WP_096387808.1\|2525903_2526599_-	hypothetical protein	A0A1W6JP37	Morganella_phage	4.2e-40	40.8
WP_096387810.1\|2526619_2527618_-	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	5.6e-78	45.3
WP_096387812.1\|2527614_2528262_-	phage N-6-adenine-methyltransferase	K7PGU4	Enterobacteria_phage	9.9e-92	71.4
WP_130992435.1\|2528264_2528537_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_096387816.1\|2528539_2529406_-	conserved phage C-terminal domain-containing protein	U5P0A0	Shigella_phage	5.3e-32	73.1
WP_072308768.1\|2529402_2529582_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_096387818.1\|2529762_2530296_-	DNA-binding protein	A0A0P0ZE62	Stx2-converting_phage	6.2e-15	34.8
WP_096387820.1\|2530335_2530548_-	helix-turn-helix transcriptional regulator	K7PMD5	Enterobacterial_phage	2.1e-22	69.1
WP_096387822.1\|2530657_2531311_+	LexA family transcriptional regulator	K7PH71	Enterobacterial_phage	1.2e-81	69.8
WP_096387824.1\|2531676_2532021_+	hypothetical protein	NA	NA	NA	NA
WP_096387826.1\|2532013_2532622_+	3'-5' exoribonuclease	A0A0H4IPM9	Stenotrophomonas_phage	9.8e-17	31.4
WP_096387828.1\|2532693_2532945_+	excisionase	NA	NA	NA	NA
WP_096387830.1\|2532919_2534053_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	3.9e-160	74.5
WP_025797012.1\|2534164_2535418_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.7e-19	88.9
WP_096387832.1\|2535659_2536286_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_096387834.1\|2536358_2536811_+	NUDIX hydrolase	A0A1B0V161	Roseobacter_phage	4.9e-05	50.0
2536325:2536339	attR	NA	NA	NA	NA
WP_096387836.1\|2537090_2537711_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_096387838.1\|2537712_2539728_+	hydrogenase 4 subunit B	NA	NA	NA	NA
WP_172863866.1\|2539744_2540689_+	respiratory chain complex I subunit 1 family protein	NA	NA	NA	NA
WP_043493856.1\|2540704_2542144_+	hydrogenase 4 subunit D	NA	NA	NA	NA
WP_025797022.1\|2542155_2542806_+	hydrogenase 4 membrane subunit	NA	NA	NA	NA
WP_096387842.1\|2542810_2544397_+	hydrogenase 4 subunit F	NA	NA	NA	NA
WP_172863845.1\|2544350_2546138_+	hydrogenase large subunit	NA	NA	NA	NA
WP_025797025.1\|2546148_2546700_+	hydrogenase 4 subunit H	NA	NA	NA	NA
WP_043493569.1\|2546696_2547473_+	NADH-quinone oxidoreductase subunit B family protein	NA	NA	NA	NA
WP_096387846.1\|2547472_2547913_+	HycH family protein	NA	NA	NA	NA
WP_172625182.1\|2547979_2549917_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_043493574.1\|2550278_2551136_+	formate transporter FocA	NA	NA	NA	NA
WP_096387850.1\|2551324_2552050_+	hypothetical protein	NA	NA	NA	NA
WP_025797035.1\|2552148_2552733_+	fasciclin domain-containing protein	NA	NA	NA	NA
WP_043493578.1\|2552791_2553355_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_040046565.1\|2553351_2554035_+	anti-sigma factor	NA	NA	NA	NA
WP_096387852.1\|2554185_2555289_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_6

3132556 : 3148945

Cronobacter_phage(58.82%)

integrase,tail,coat

attL 3129581:3129596|attR 3149023:3149038

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3129581:3129596	attL	NA	NA	NA	NA
WP_096388194.1\|3132556_3133543_+	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	8.4e-26	29.0
WP_096388195.1\|3133575_3135549_-	hypothetical protein	F1C5A8	Cronobacter_phage	2.0e-50	70.6
WP_096388196.1\|3135605_3138071_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	4.7e-259	53.9
WP_096388197.1\|3138018_3138450_-	hypothetical protein	F1C5F2	Cronobacter_phage	1.6e-42	64.0
WP_096388198.1\|3138453_3138924_-	DUF1833 family protein	F1C5F1	Cronobacter_phage	1.1e-44	55.2
WP_096388199.1\|3138926_3139424_-	hypothetical protein	F1C5F0	Cronobacter_phage	5.5e-58	65.2
WP_096388200.1\|3139425_3141657_-	tape measure protein	A0A1B1W284	Salmonella_phage	1.5e-78	41.4
WP_096388201.1\|3141713_3142100_-	hypothetical protein	NA	NA	NA	NA
WP_096388202.1\|3142175_3142877_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	1.8e-46	45.2
WP_096388203.1\|3142931_3143684_-	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	5.8e-59	50.6
WP_096388204.1\|3143751_3144132_-	hypothetical protein	G0ZNE4	Cronobacter_phage	1.3e-14	36.0
WP_096388205.1\|3144128_3144500_-	hypothetical protein	G0ZNE3	Cronobacter_phage	2.4e-34	56.9
WP_096388206.1\|3144501_3144846_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	4.4e-30	56.6
WP_172863849.1\|3144842_3145013_-	hypothetical protein	I6R0P9	Salmonella_phage	3.7e-14	60.7
WP_096388207.1\|3145012_3145393_-	hypothetical protein	F1C5E2	Cronobacter_phage	3.1e-29	55.3
WP_096388208.1\|3145395_3145635_-	hypothetical protein	NA	NA	NA	NA
WP_096388209.1\|3145646_3146738_-\|coat	phage coat protein	F1C5E1	Cronobacter_phage	1.0e-141	69.7
WP_096388210.1\|3147460_3147679_+	hypothetical protein	NA	NA	NA	NA
WP_072008181.1\|3147675_3147939_+	hypothetical protein	A0A1V0E5M4	Salmonella_phage	2.2e-10	45.9
WP_096388211.1\|3147877_3148945_+\|integrase	tyrosine-type recombinase/integrase	Q9G075	Enterobacteria_phage	1.9e-103	51.7
3149023:3149038	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP017469

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection