CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP017623	Enterococcus faecalis strain W11	3 crisprs	csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh	0	10	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP017623_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017623_1

421053-421815

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	PILER-CR
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	CRISPRCasFinder
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	CRT

11 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_AP017623_1

>merge|NZ_AP017623|1|421053-421815|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAAAAGTTGAATATGTTTCGCTTTGGTGTAAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACGATGATTGAAAATGGTTATGCTTTCGCCAGCGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACCTGCCAGAGGGTATGCTAGGGGTAGGGCTAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACGCGTACAGCCATTCGTCTGGCATCTTCAATGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAAGCACAAAAGGCTGAAGAACAAAAACAACGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACGGCATCTTTCAACACAGTGCGCTTTTCGATGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTCTTCTAGCGTTTCAATGTCAATAGTTACAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTTGATACGCTTCGTCCGTGTGATTGAGATAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAAATACCGCTAGCATTGTAGCCACCAATCTGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACGCAAAGCCTTTGGCAAACGCTCGAAGCACTGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTTAAACGTTCTATTCCCATTCGTTCCGACTGTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACG

>NZ_AP017623|1|1|421053-421749|PILER-CR
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAAAGTTGAATATGTTTCGCTTTGGTGTAA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GATGATTGAAAATGGTTATGCTTTCGCCAGC
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	CTGCCAGAGGGTATGCTAGGGGTAGGGCTA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GCGTACAGCCATTCGTCTGGCATCTTCAAT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAGCACAAAAGGCTGAAGAACAAAAACAAC
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GGCATCTTTCAACACAGTGCGCTTTTCGAT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TCTTCTAGCGTTTCAATGTCAATAGTTACA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TTGATACGCTTCGTCCGTGTGATTGAGATA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAATACCGCTAGCATTGTAGCCACCAATCT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GCAAAGCCTTTGGCAAACGCTCGAAGCACT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC

>NZ_AP017623|1|1|421053-421815|CRISPRCasFinder
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAAAGTTGAATATGTTTCGCTTTGGTGTAA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GATGATTGAAAATGGTTATGCTTTCGCCAGC
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	CTGCCAGAGGGTATGCTAGGGGTAGGGCTA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GCGTACAGCCATTCGTCTGGCATCTTCAAT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAGCACAAAAGGCTGAAGAACAAAAACAAC
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GGCATCTTTCAACACAGTGCGCTTTTCGAT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TCTTCTAGCGTTTCAATGTCAATAGTTACA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TTGATACGCTTCGTCCGTGTGATTGAGATA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAATACCGCTAGCATTGTAGCCACCAATCT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GCAAAGCCTTTGGCAAACGCTCGAAGCACT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TTAAACGTTCTATTCCCATTCGTTCCGACT
GTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACG

>NZ_AP017623|1|1|421053-421815|CRT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAAAGTTGAATATGTTTCGCTTTGGTGTAA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GATGATTGAAAATGGTTATGCTTTCGCCAGC
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	CTGCCAGAGGGTATGCTAGGGGTAGGGCTA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GCGTACAGCCATTCGTCTGGCATCTTCAAT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAGCACAAAAGGCTGAAGAACAAAAACAAC
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GGCATCTTTCAACACAGTGCGCTTTTCGAT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TCTTCTAGCGTTTCAATGTCAATAGTTACA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TTGATACGCTTCGTCCGTGTGATTGAGATA
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	AAATACCGCTAGCATTGTAGCCACCAATCT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	GCAAAGCCTTTGGCAAACGCTCGAAGCACT
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC	TTAAACGTTCTATTCCCATTCGTTCCGACT
GTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017623.1\|WP_002364834.1\|419106_419973_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_AP017623.1\|WP_002364833.1\|419969_420299_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_AP017623.1\|WP_002364832.1\|420299_420959_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_AP017623.1\|WP_002401854.1\|428757_429609_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_AP017623.1\|WP_096397535.1\|412826_414242_+\|dipeptidase-PepV	unknown	unknown	gnl\|CDD\|130941
NZ_AP017623.1\|WP_002358653.1\|407831_408404_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223477
NZ_AP017623.1\|WP_002375918.1\|424400_425918_+\|ABC-transporter-permease/substrate-binding-protein	unknown	unknown	gnl\|CDD\|270328
NZ_AP017623.1\|WP_002355509.1\|426059_426515_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_AP017623.1\|WP_096397536.1\|415092_419106_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_AP017623.1\|WP_096397538.1\|423446_424400_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
NZ_AP017623.1\|WP_002355504.1\|414386_414620_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017623.1\|WP_096397539.1\|428079_428634_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_AP017623.1\|WP_025186237.1\|408470_410021_-\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase	unknown	unknown	gnl\|CDD\|237588
NZ_AP017623.1\|WP_096397537.1\|422196_423210_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|226122
NZ_AP017623.1\|WP_033785798.1\|426548_428057_+\|phosphoglucomutase	unknown	unknown	gnl\|CDD\|215211
NZ_AP017623.1\|WP_002355518.1\|432212_432554_+\|YlbF-family-regulator	unknown	unknown	gnl\|CDD\|237467
NZ_AP017623.1\|WP_096397534.1\|410200_411850_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NZ_AP017623.1\|WP_002398138.1\|429963_432150_+\|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl\|CDD\|273955
NZ_AP017623.1\|WP_033626949.1\|411958_412693_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_AP017623.1\|WP_096397540.1\|432709_433945_+\|DNA-repair-exonuclease	unknown	unknown	gnl\|CDD\|277319

Protein	Function_ID	Function_description	E-value
NZ_AP017623.1\|WP_002364834.1\|419106_419973_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.59266e-115
NZ_AP017623.1\|WP_002364833.1\|419969_420299_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.08189e-44
NZ_AP017623.1\|WP_002364832.1\|420299_420959_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.31098e-118
NZ_AP017623.1\|WP_002401854.1\|428757_429609_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	2.48238e-91
NZ_AP017623.1\|WP_096397535.1\|412826_414242_+\|dipeptidase-PepV	gnl\|CDD\|130941	TIGR01886, Beta-Ala-Xaa_dipeptidase, dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_AP017623.1\|WP_002358653.1\|407831_408404_+\|hypothetical-protein	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	4.15912e-18
NZ_AP017623.1\|WP_002375918.1\|424400_425918_+\|ABC-transporter-permease/substrate-binding-protein	gnl\|CDD\|270328	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ChoS of Lactococcus lactis is predicted to be involved in uptake of compatible solutes such as choline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ChoS belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.06182e-168
NZ_AP017623.1\|WP_002355509.1\|426059_426515_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	1.0984e-46
NZ_AP017623.1\|WP_096397536.1\|415092_419106_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_AP017623.1\|WP_096397538.1\|423446_424400_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	4.04201e-140
NZ_AP017623.1\|WP_002355518.1\|432212_432554_+\|YlbF-family-regulator	gnl\|CDD\|237467	PRK13676, PRK13676, YlbF/YmcA family competence regulator.	2.56028e-37
NZ_AP017623.1\|WP_096397539.1\|428079_428634_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.05081e-25
NZ_AP017623.1\|WP_025186237.1\|408470_410021_-\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase	gnl\|CDD\|237588	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase.	0
NZ_AP017623.1\|WP_096397537.1\|422196_423210_-\|acyltransferase-family-protein	gnl\|CDD\|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	3.30533e-12
NZ_AP017623.1\|WP_033785798.1\|426548_428057_+\|phosphoglucomutase	gnl\|CDD\|215211	PLN02371, PLN02371, phosphoglucosamine mutase family protein.	0
NZ_AP017623.1\|WP_096397534.1\|410200_411850_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	7.06408e-136
NZ_AP017623.1\|WP_002398138.1\|429963_432150_+\|PBP1A-family-penicillin-binding-protein	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_AP017623.1\|WP_033626949.1\|411958_412693_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	6.76059e-91
NZ_AP017623.1\|WP_096397540.1\|432709_433945_+\|DNA-repair-exonuclease	gnl\|CDD\|277319	cd00840, MPP_Mre11_N, Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.07608e-49

>NZ_AP017623.1|WP_002364832.1|420299_420959_+|type-II-A-CRISPR-associated-protein-Csn2
MRVNFSLLEEPIEIEKATFLTIKDVQTFAHLVKLIYQYDGENELKLFDAQQKGLKPTELFVVTDILGYDVNSAATLKLIYGDLEAQLNDKPEVKSMIEKLTGTISQLIGYELLEHEMDLEEDGITVQELFKALGIKIETTSDTIFEKVMEITQVHRYLSKKKLLIFINACTYLTEDEVQQVVEYISLNNVDVLFLEQRVVQNRFQYILDENFYLSYEKA
>NZ_AP017623.1|WP_002364833.1|419969_420299_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRLLLMFDMPTDTASDRKAYRKFRKFLINEGFIMHQFSVYSKILLNDTANKAMLARLKQNNPQRGLITLLNVTEKQFSRMIYLHGEQDNRVANSDERIVFLGEE
>NZ_AP017623.1|WP_002364834.1|419106_419973_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
>NZ_AP017623.1|WP_096397536.1|415092_419106_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKKDYVIGLDIGTNSVGWAVMTEDYQLVKKKMPIYGNTEKKKIKKNFWGVRLFEEGHTAEDRRLKRTARRRISRRRNRLRYLQAFFEEAMTDLDENFFARLQESFLVPEDKKWHRHPIFAKLEDEVAYHETYPTIYHLRKKLADSSEQADLRLIYLALAHIVKYRGHFLIEGKLSTENTSVKDQFQQFMVIYNQTFVNGESRLVSAPLPESVLIEEELTEKASRTKKSEKVLQQFPQEKANGLFGQFLKLMVGNKADFKKVFGLEEEAKITYASESYEEDLEGILAKVGDEYSDVFLAAKNVYDAVELSTILADSDKKSHAKLSSSMIVRFTEHQEDLKKFKRFIRENCPDEYDNLFKNEQKDGYAGYIAHAGKVSQLKFYQYVKKIIQDIAGAEYFLEKIAQENFLRKQRTFDNGVIPHQIHLAELQAIIHRQAAYYPFLKENQEKIEQLVTFRIPYYVGPLSKGDASTFAWLKRQSEEPIRPWNLQETVDLDQSATAFIERMTNFDTYLPSEKVLPKHSLLYEKFMVFNELTKISYTDDRGIKANFSGKEKEKIFDYLFKTRRKVKKKDIIQFYRNEYNTEIVTLSGLEEDQFNASFSTYQDLLKCGLTRAELDHPDNAEKLEDIIKILTIFEDRQRIRTQLSTFKGQFSAEVLKKLERKHYTGWGRLSKKLINGIYDKESGKTILDYLIKDDGVSKHYNRNFMQLINDSQLSFKNAIQKAQSCEHEETLSETVNELAGSPAIKKGIYQSLKIVDELVAIMGYAPKRIVVEMARENQTTSTGKRRSIQRLKIVEKAMAEIGSNLLKEQPTTNEQLRDTRLFLYYMQNGKDMYTGDELSLHRLSHYDIDHIIPQSFMKDDSLDNLVLVGSTENRGKSDDVPSKKVVKDMKAYWEKLYAAGLISQRKFQRLTKGEQGGLTLEDKAHFIQRQLVETRQITKNVAGILDQRYNAKSKEKKVQIITLKASLTSQFRSIFGLYKVREVNDYHHGQDAYLNCVVATTLLKVYPNLAPEFVYGEYPKFQAFKENKATAKTIIYTNLMRFFTEDEPRFTKDSEILWSNSYLKTIKKELNYHQMNIVKKVEVQKGGFSKESIKPKGPSNKLIPVKNGLDPQKYGGFDSPVVAYTVLFTHEKGKKPLIKQEILGITIMEKTRFEQNPILFLEEKGFLRPRVLMKLPKYTLYEFPEGRRRLLASAKEAQKGNQMVLPEHLLTLLYHAKQCLLPNQSESLAYVEQHQPEFQEILERVVDFAEVHTLAKSKVQQIVKLFEANQTADVKEIAASFIQLMQFNAMGAPSTFKFFQKDIERARYTSIKEIFDATIIYQSTTGLYETRRKVVD
>NZ_AP017623.1|WP_002355504.1|414386_414620_+|hypothetical-protein
MSETLIVNYLIKGRVKMNVEELVQKAKDLIGEGNVEHAQQFIEEHKDELGEHYHKITAMLADTTTDGLFDKIKGLFQ
>NZ_AP017623.1|WP_096397535.1|412826_414242_+|dipeptidase-PepV
MTIDWTKEVEARKDDLLEDLQNLLRINSERDDAQATPEAPFGPGPVAGLKHMLAYGERDGFTVKNVDNYAGHIEYGEGDETLGIFGHMDVVPAGDGWETDPYEPVIKDGKIYARGASDDKGPSMAAYYAMKIIKELGLPVSKKIRFVVGSDEESGWGDMDYYFQHEEAPDFGFSPDAEFPIINGEKGNVTIRLTFRGGNGADYKLESFKSGLRENMVPGTADAVVTAASADEAASLAASFETFIKQEAKISGNAELLDKTVTFHVVGKGAHGASPQSGINAATFLATFLNDYSFAEGAYSFINTIAEFIHEDFYGEKLGVAFEDEKMGKLTMNAGIVNFDPENPENSLVTLNFRYPKGTSAEELQTKVQATVGETVTATQGDRNQEPHYVPVDDPLVATLLQVYEDHTGEKGQEQIIGGGTYGRLLKRGVAYGAMFPGYTDTMHQANEFMELDDLFRAAAIYADAIYRLAK
>NZ_AP017623.1|WP_033626949.1|411958_412693_+|rRNA-pseudouridine-synthase
MRLDKFLADVGIGSRKEIKQLLKKKVVTVNGDVVKEAKTQVNEETDQIALMGEILTYQKFFYYMLHKPQGVISATEDQRDETVIDLLTDQDYRADLFPVGRLDKDTEGLLLLTNDGQLAHQLLSPKKHVDKEYLAEVEGLVTVEDCQLFAQGFALKDGEMVKPSRLVIETINEEEGTSVVRLVIQEGKFHQVKRMLATVGKPVTYLKRLRMGELWLDETLELGEYRPLTEDELQQLQPKQSYLN
>NZ_AP017623.1|WP_096397534.1|410200_411850_+|polysaccharide-biosynthesis-protein
MINQPNSVDQPILTNQEKMVKGSAWMTASNIISRMLGAIYIIPWYAWMGEHGNEANSLFSMGYTIYALFLMISTAGIPGAIAKQTSHYNSLNEYKISRQLFYRALQLMGGLGVVFAIVMYLASPALAALSGGGPELVPTMRSLSLAVLVFPSMSVIRGYFQGNQEMMPFALSQIVEQVARVFYMLLTAFIIMKVFEGNYVTAVNQATFAAFIGMLASFAVLGYYMYKQKPLFDYLEEHSANEHEIAPKELLIETFKEAIPFIVVGSGVTVFKLVDQFTFSNFMRLFTDYSDTQLRELFGIFNANPDKLTMIVVALATSISATGLPLITEAVTLKNHRELARLISNNLQLFVFVMLPATFGMIVLAQPLYTVFYMPDALGTSLLVQACYASLFLGLYMLVSNMLMGMYENRDAMRYLGIGLAVKLIVQFPAIRLFEVYGPLLATMIGFTVSCVLILRRIRQVTRFNYKLTLRRTLLMFCITVIMMIIALIFRQFLYLFLDPTRRFQAFIIVVIVAAAGGAFYGYSVLKIRLADRLLGKNAAKLRAKFNIK
>NZ_AP017623.1|WP_025186237.1|408470_410021_-|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase
MKRLEAKKVTISLFAIRDCLEKEDLLKEFISPEGWHLTLSDTLGQREVTALSYDSRDVTAETLFFCKGLNFKEIYLENAVKDGLEIYVSEVPYEVPAQLGIIVTDIKKAMAVLSMAFYDYPQNKLKLIGFTGTKGKTTAAYFTKYILDVATQQKTALLSTMNSTLDGKTFFKSALTTPESLDLYRMMATAVANGMTHFIMEVSSQAYKTNRVYKLFFDVGIFLNITPDHISPIEHPTFDDYFYCKRQLITHSKVIVLNHEADYFPLLKETAQQQKVPAIVYGSQPASEVDYSFAVSSDDSLRFIVESPADALGLAGSYHLRLGGDFNKGNALSAAIASVLVGASKEECQQGIAATTVPGRMESLTNTNGATVYVDYAHNYDSLKNLLTFVREEHPDGRLIVLVGSTGDKAISRRKDFGRVLSELADVAVLTTDDPASEDPAKICQEIQAHITKEMPVYTVLDRGEAIAHALSLSTTADDAIVLAGKGADLYQKVNGVDEPYAGDFALAEAFINKKN
>NZ_AP017623.1|WP_002358653.1|407831_408404_+|hypothetical-protein
MKQFFQKGSKPNQLVVAFHGTGGNEYQLLTTIATLYPEASVLSYLGTEGVGEQRRFFAPLVNGALPRANFDERVTAFLEEVWQPQKLYDEVIFIGYSNGANFILGLLEKNPTIANTVILLHPSNLGYQYVSGEFATKVIVTTGAQDELSIPGQVLSLANQLKKHFPVDFLLVDGGHGLSEEEVTKIKEVL
>NZ_AP017623.1|WP_096397537.1|422196_423210_-|acyltransferase-family-protein
MENDKRIYKWDNVKLFLIFLVIFGHILDREASPSRLMETINFWIYSFHMPAFIFVSGLFSKHAIKQRKYLRLLSFVWLYLLAKLLITLANFAFANKMNFDLLNETGVPWYLLSLASFYLITIFLQRIQPKIMLPIIIVIGCASGYLPVEGFLSLGRTLGFFPFFYCGYLMDIQKLQTFLDHRKVKWAAIGVILSSFLFVNNQWSLATKFWGFLTGWASYAEISPAFEYSSFIQLFFYVAAALVSLSWFALLPKRKLPLSALGKDTLYPYLLHMPLIILLESGLQLDTLFKEWFTFRILALFFLALFILAITNMPVVKWGADYLFNPQSIMIPKKIYK
>NZ_AP017623.1|WP_096397538.1|423446_424400_+|ABC-transporter-ATP-binding-protein
MIKFQNVSKVYQENAVLSDVNLTIQQGEFFVLVGPSGSGKTTTLKMINRLIEPTTGEVALNEQAVTNYPLRELRLKIGYVLQQIALFPNLTVAENIELIPEMKKWPKEQRRERTIELLKKVQLNPEEYLHRKPAALSGGEQQRIGILRAIAAEPEVILMDEPFSALDPISRHHLQRLVKELHQELASTIVFVTHDMNEALLLGERICIMDAGKIIQVDTPEAIQKHPKNNFVGQFFKQSSPELANYCGADLTAFLEATDETIEPVPTVFMETNLKEIVQLINAQEKANLVEKQQVLGCITSKTITRFMEQLLESEGQ
>NZ_AP017623.1|WP_002375918.1|424400_425918_+|ABC-transporter-permease/substrate-binding-protein
MQALIETFFARKEEYLQALIEHMQLSFISLLFAALIAIPLAIYLTSHRKLAESLLQVTGIFQTIPSLALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGMSKKEKLFKFELQMALPFIISGIRTATVLIIGTATLAALIGAGGLGTFILLGIDRNNLSLIFIGAISSAALAVLFNYGIHWLEKANGRRLIIGGTILGLLLGGSFFWNQQTSSKEKQLTIAGKLGAEPDIIINMYKALIEENSDIQVTLKPNFGKTTFLYNALKSDEIDLYPEFTGTVIETFLKNPPQLDNQPQVVYEAARAGLKKQENLTLLKPMRYENTYAVAVKRSFAKAHQLKTISDLQKISNQLKAGFTLEFIDRQDGYKGLQEKYHLNLNVQSMEPALRYQAINNGEVNVIDAYSTDSELRQYDLVTLEDDQALFPPYQGAPLIKTATLEKYPELAEILNKLAGKISEEEMSEMNYQVNVEGQDPSIVAKDYLKEKNLLK
>NZ_AP017623.1|WP_002355509.1|426059_426515_+|arginine-repressor
MKKAERQRLIKQLIMQQEIETQDELITRLEELGVRATQATVSRDIREMSIVKTHGADGRVKYAIFSQAQGTSSEEKLRESVKDSVVRMERVQFIVILHTEMGNADVVSNFLDEVAYPEVAGTVAGADTIIVITRSEEDAEHFIERIENMIF
>NZ_AP017623.1|WP_033785798.1|426548_428057_+|phosphoglucomutase
MVELKALQNGSDIRGIALDTEEQTATLTATAVAEIAVGVVRWLQDKKQLPRKAQQRLTIAIGHDSRLTAEPIKQVLVDTFLSLGIQVIDVGLATTPAMFMATQFPTLQCDAAIMITASHLPYYFNGLKFFTAEGGAEKEDIRYILSHTDPLTANENGTLMKQELLPIYAEHLVAKIRQGIHSPEEKPLQGFRIIVDAGNGAGGFFAEQVLQVLGADTTGSQFLEPDGHFPNHVPNPDNSEAMKSIQTAVLANQADLGIIFDTDVDRSAVVDQSGEVLNRNNLIAVLAAIVLKEAPGSYIVTNSPTSSHLKTFIEEKGGQQIRYISGYRNVINKMIELNHGGFQTPLAIETSGHAAFQENYNLDDGAYVVAKILMLLPELKQNNQTLGDLIATLKQPAETNEFRFKITAEDVTCYGQQVLRDFELFVENQADFAVDRENQEGVRGNVSGQYGSGWFLLRLSLHEPLLVLQVENDQSDKNACVIEKIATFLQKYEEIDSQQIEK
>NZ_AP017623.1|WP_096397539.1|428079_428634_+|GNAT-family-N-acetyltransferase
MENVLKGKHVGFSHFREEYIEHIAKQQWDNELLRHLSWDALHPWGLEEWKDFTINKGEDDRFLFAILENTTEEFIGWVSLSDVQLKNRGANLGIAILQKEQRGKGYGFEAVSLICKFAFYELGLHKIRLAVNSNNQKAIHVYEKVGFKKEGIDREALFQDGQWLDIYNYGILQKEWLQMIKAES
>NZ_AP017623.1|WP_002401854.1|428757_429609_-|RluA-family-pseudouridine-synthase
MRLPENFSTMTVKELLENEWLVPRKVRHFLRTRKNVKINGETAAFHFPVQAGDCVTLTFEETDYVRPTIHLGEATHVKVLYEDEHLMIVNKPYGIKTHPNQPQETDTLLNHVAAYLAEKNQVPYVVHRLDKETSGAIVFAKNPFVLPILGRLLETKQIYRQYQAIVAGHFNQKEQTINQPIGRDRHDRRKRRIDPQKGDSAITHVQVVQALSNNQTAVTCVLETGRTHQIRVHLASEGHPIIGDPLYNPKSQAARLMLHASQLHLLHPFTKKQIVVTAAPGLW
>NZ_AP017623.1|WP_002398138.1|429963_432150_+|PBP1A-family-penicillin-binding-protein
MDNLKQFFSKVGVGLRHFWTWIKPYLIQFHQARKRIWKKYQINKIFLLIGLVVALGASIYLFYLAKSANVETLKSGLSESTRVYDESGEEVGKLFGQKGTFVELDNISPYIQDAVISTEDRGFYQHKGYSIKGIARAVVGKLTFGKIGGGGGGSTITQQLAKNAYLTQEQTLDRKARELFLAIEIEKKYSKKDILAMYLNNSYFGNGVWGVQDAARKYFGVDASQVTVGEAATLAGMLKGPGIYNPIDYIDNATARRNTVLQLMVDNKKLSQEEANQEASVNLASLLNDTYVGDENSYKYPYYFDAVIDEAVNRYKFKEEDILNKGYKIYTSLNQKYQDAMDATYKNDALFPPNAEDGAMVQSGSVAIDPKTGGVQALVGGRGEHVYRGFNFATQTKRSPGSSLKPISVYTPALEAGYKPDSILEDKPQDYYPAQNYSRTYSGEVPMYQALGESLNLPAVWLLHQIGLDKGYEKTEKFGIPLSEKDRYYGLALGGLQTGVSPLTMAGAYSAFANEGYKTETHLITKIVDSTGAIVVDNTKVKKEQVITKDVADGITSMLLGVFSSGSGVNAQPAGYVMAGKTGTTETNFDSSKTNDQWVIGYTPEVVIATWLGFQETSKTHYLEGSSATYASQVFNSQASGILPEVKQAQFPVADAYATGGKVVDSNDSLTGGANSNWRDNLKDFGNSVQDGASNFGDTLNEVGGQIKDGAKKVKDKIEGIFGGLLGN
>NZ_AP017623.1|WP_002355518.1|432212_432554_+|YlbF-family-regulator
MSNIYDTANQIERELRELDEFKALQAAYEEVKADEAAYTLFKEFQGFQQGLQEKQMRGEEFTDEDAEKAQSIATKVQETAVINELMQKEQAFSLVVNDLNRIIMTPVRDMYND
>NZ_AP017623.1|WP_096397540.1|432709_433945_+|DNA-repair-exonuclease
MKLLHTADLHMDRSFEGLTGIPTALAKRLREANQQLLMNIVTVATREAVDLVIFAGDTFHQSQTSISMQAQLMAALEQLKQAEIPVILTFGNHDYYKKDRYWFSFPDNVFLFEKEMVETLYFETKAGEQVAVSGFSYEHPWIDENKALEFPIKQAESDIHIGIYHGDTSRKAQQNYAPFTWKDLKATGYNYWALGHIHQPQIVSEQPLIVYPGTPQGHTKKEQSLQGVAVVTLSQNQATVQFEKVAEIDWTNEEVSLAQCRDTQSVLSYLETSLLTKWQAHQQQQLMALTLKETQHLDVTVVQAIVNGELLSYLQQQLLQKTQGDFFVYRLILQAEEPTKEPIYLAASPNLLTSLEKTYLDPVIFEDTTKELLRYPEFAGIFSMDEQWRLESLRLAHEQINEDFTIQEDPL

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Crispr_ID: NZ_AP017623_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017623_2

813171-813265

Orphan

Consensus_repeat	Method
CCAGATGCAAGCGGCGAACCAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017623_2

>merge|NZ_AP017623|2|813171-813265|CRISPRCasFinder
CCAGATGCAAGCGGCGAACCAGATAAGGATAAAGAACCAGATGCAAGTGGCGAACCAGAAAAAGACAAAGAACCAGATGCAAGTGGCGAACCAGA

>NZ_AP017623|2|2|813171-813265|CRISPRCasFinder
CCAGATGCAAGCGGCGAACCAGA	TAAGGATAAAGAACCAGATGCAAGTGGCGAACCAGAAAAAGACAAAGAA
CCAGATGCAAGTGGCGAACCAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017623.1\|WP_010777500.1\|799068_799401_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
NZ_AP017623.1\|WP_096397631.1\|807293_807878_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017623.1\|WP_002355926.1\|802329_802959_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|341387
NZ_AP017623.1\|WP_096397630.1\|802971_803784_+\|kinase/pyrophosphorylase	unknown	unknown	gnl\|CDD\|377080
NZ_AP017623.1\|WP_096397633.1\|809004_811242_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|223256
NZ_AP017623.1\|WP_002409095.1\|820844_822251_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_AP017623.1\|WP_002386206.1\|820117_820693_+\|DUF1361-domain-containing-protein	unknown	unknown	gnl\|CDD\|369208
NZ_AP017623.1\|WP_016622306.1\|799514_802160_-\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|273822
NZ_AP017623.1\|WP_010828668.1\|806382_807117_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP017623.1\|WP_002355939.1\|816154_817765_+\|aspartate-4-decarboxylase	unknown	unknown	gnl\|CDD\|163513
NZ_AP017623.1\|WP_096397634.1\|817907_818993_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017623.1\|WP_096397632.1\|807900_808956_+\|endonuclease	unknown	unknown	gnl\|CDD\|197314
NZ_AP017623.1\|WP_002361432.1\|814821_815475_+\|DUF4767-domain-containing-protein	unknown	unknown	gnl\|CDD\|374270
NZ_AP017623.1\|WP_002355945.1\|823710_823896_-\|YjzD-family-protein	unknown	unknown	gnl\|CDD\|371396
NZ_AP017623.1\|WP_002366403.1\|803854_806386_-\|bifunctional-lysylphosphatidylglycerol-flippase/synthetase-MprF	unknown	unknown	gnl\|CDD\|225451
NZ_AP017623.1\|WP_002381323.1\|822459_823656_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340949
NZ_AP017623.1\|WP_002355941.1\|819108_819912_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_AP017623.1\|WP_002381321.1\|815584_815995_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|239876
NZ_AP017623.1\|WP_172761446.1\|813834_814779_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_AP017623.1\|WP_172761444.1\|797430_798642_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226925

Protein	Function_ID	Function_description	E-value
NZ_AP017623.1\|WP_010777500.1\|799068_799401_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	1.54494e-13
NZ_AP017623.1\|WP_002355926.1\|802329_802959_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|341387	cd04617, CBS_pair_CcpN, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains of CcpN repressor. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	6.96084e-59
NZ_AP017623.1\|WP_002366403.1\|803854_806386_-\|bifunctional-lysylphosphatidylglycerol-flippase/synthetase-MprF	gnl\|CDD\|225451	COG2898, COG2898, Uncharacterized conserved protein [Function unknown].	3.74669e-120
NZ_AP017623.1\|WP_096397633.1\|809004_811242_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0
NZ_AP017623.1\|WP_002386206.1\|820117_820693_+\|DUF1361-domain-containing-protein	gnl\|CDD\|369208	pfam07099, DUF1361, Protein of unknown function (DUF1361). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.	1.11974e-32
NZ_AP017623.1\|WP_016622306.1\|799514_802160_-\|pyruvate,-phosphate-dikinase	gnl\|CDD\|273822	TIGR01828, Pyruvate_phosphate_dikinase, pyruvate, phosphate dikinase. This model represents pyruvate,phosphate dikinase, also called pyruvate,orthophosphate dikinase. It is similar in sequence to other PEP-utilizing enzymes. [Energy metabolism, Other].	0
NZ_AP017623.1\|WP_010828668.1\|806382_807117_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.11852e-26
NZ_AP017623.1\|WP_002355939.1\|816154_817765_+\|aspartate-4-decarboxylase	gnl\|CDD\|163513	TIGR03801, For_A_Pyridoxal-5-_Phosphate, aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1). [Energy metabolism, Amino acids and amines].	0
NZ_AP017623.1\|WP_002409095.1\|820844_822251_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	4.01123e-150
NZ_AP017623.1\|WP_096397632.1\|807900_808956_+\|endonuclease	gnl\|CDD\|197314	cd09080, TDP2, Phosphodiesterase domain of human TDP2, a 5'-tyrosyl DNA phosphodiesterase, and related domains. Human TDP2, also known as TTRAP (TRAF/TNFR-associated factors, and tumor necrosis factor receptor/TNFR-associated protein), is a 5'-tyrosyl DNA phosphodiesterase. It is required for the efficient repair of topoisomerase II-induced DNA double strand breaks. The topoisomerase is covalently linked by a phosphotyrosyl bond to the 5'-terminus of the break. TDP2 cleaves the DNA 5'-phosphodiester bond and restores 5'-phosphate termini, needed for subsequent DNA ligation, and hence repair of the break. TDP2 and 3'-tyrosyl DNA phosphodiesterase (TDP1) are complementary activities; together, they allow cells to remove trapped topoisomerase from both 3'- and 5'-DNA termini. TTRAP has been reported as being involved in apoptosis, embryonic development, and transcriptional regulation, and it may inhibit the activation of nuclear factor-kB. This family belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	1.26842e-08
NZ_AP017623.1\|WP_002361432.1\|814821_815475_+\|DUF4767-domain-containing-protein	gnl\|CDD\|374270	pfam15983, DUF4767, Domain of unknown function (DUF4767). This domain family is found in bacteria, and is approximately 140 amino acids in length. There is a single completely conserved residue Q that may be functionally important.	6.91999e-49
NZ_AP017623.1\|WP_002355945.1\|823710_823896_-\|YjzD-family-protein	gnl\|CDD\|371396	pfam11151, DUF2929, Protein of unknown function (DUF2929). This family of proteins with unknown function appears to be restricted to Firmicutes.	5.82555e-16
NZ_AP017623.1\|WP_096397630.1\|802971_803784_+\|kinase/pyrophosphorylase	gnl\|CDD\|377080	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase. This family of regulatory proteins has ADP-dependent kinase and inorganic phosphate-dependent pyrophosphorylase activity.	2.8082e-124
NZ_AP017623.1\|WP_002381323.1\|822459_823656_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.39054e-173
NZ_AP017623.1\|WP_002355941.1\|819108_819912_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.92206e-83
NZ_AP017623.1\|WP_002381321.1\|815584_815995_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|239876	cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate. The mammalian nm23/NDP kinase gene family can be divided into two distinct groups. The group I genes encode proteins that generally have highly homologous counterparts in other organisms and possess the classic enzymatic activity of a kinase. This group includes vertebrate NDP kinases A-D (Nm23- H1 to -H4), and its counterparts in bacteria, archea and other eukaryotes. NDP kinases exist in two different quaternary structures; all known eukaryotic enzymes are hexamers, while some bacterial enzymes are tetramers, as in Myxococcus. They possess the NDP kinase active site motif (NXXH[G/A]SD) and the nine residues that are most essential for catalysis.	7.55331e-72
NZ_AP017623.1\|WP_172761446.1\|813834_814779_+\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	3.45522e-27
NZ_AP017623.1\|WP_172761444.1\|797430_798642_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	1.07583e-59

>NZ_AP017623.1|WP_096397633.1|809004_811242_-|excinuclease-ABC-subunit-UvrA
MEWIEIKHATQNNLKNISVNIPKKQLTVVTGLSGSGKSSLVFDTLAAESRRELNDTFSSFVQNYLPKYGRPEVEKIENLPVAIVIDQKKVAGNSRSTVGTYTDIYTFLRLLFSRAGSPFVGYSDTFSFNHPDGKCPTCDGLGKITEINLHQLVDYDKSLNEGPIDFPTFTVGNWRWKRYAHSGLFDLDKKIKDYSPEELALFLYAPQQKLANPPKEWPHTALYEGIVPRMQRSILHTDEGKRHQKYLNHFVTVKRCPDCLGSRVNERVRSCKINQKSIADAVDMPLTELHSFIRSMDLSLITNIQEELLVRLEALINIGLSYLTLGRATETLSGGEAQRIKIAKYVNSALNDIMYILDEPSAGLHPKDIERISRALLNLKNKGNTVVLVEHNPQLIREADFIIDIGPFAGENGGHVQFSGTYDAFLASKTLTSQALQEPLPLNDQPRKARKSLTIEHATLHNLNNLSVEVPLGVLTVICGVAGSGKSSLAEEIYQKAQADNQEIIHLSQKSITANLRSTPMTYLNIFDKVRKLFAEENHVSPALFSYNSKGACPTCKGKGIIVSDMSFMEDVTSICETCHGTRYKEEVLHYLYNGKNIVEVLALSVKDGYDFFKDQPFALSLKNLLEVGLSYLKLNQSLSTLSGGELQRVKLADTLHQKKAIYLMDEPTDGLHLIDIQQSLQLFNRMVEEGNSLILLEHHIDVIKSADWLIELGPEGGENGGQLLFTGTPTNMLNSTHSITKGYL
>NZ_AP017623.1|WP_096397632.1|807900_808956_+|endonuclease
MKKFFKYLGSLMVLLLSIALILIGYLTFREFRPRAVEPVAINKQFSEQTIEKQQSISLVTYNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQEVDRRSQRSYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVESGLLTLSNEKITEAKRIALPNPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEGKIAQSKKLADVLSQEYAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPKHFSLAYDDQQPTVRVLNKPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYTDHQPVKMEVGLK
>NZ_AP017623.1|WP_096397631.1|807293_807878_+|hypothetical-protein
MSLIVLIGAQAVGKMTVGKALEKQLDAKLLFNHQTIDLFANYLGYTERAFQLSDSVRKELFHAFVENPATNTTKNIIFTVVIAFDQEQDFQFLEEISEIFLSKHESVYFVELVSSTAIRLERNVHPERLEAKPSKRDVDFSRKELLNTFKEHRLVSHEGELESTFPNVKITKINNSNMTPEEVATKIIATFGLT
>NZ_AP017623.1|WP_010828668.1|806382_807117_-|alpha/beta-hydrolase
MAIEKYFETIDGSQIFYQIFGKETNYPLVLLHGNGNDHTFFNYQISYFSKEYQVIAVDTRGHGRSTNTQSQLTFPLLAEDLAGIIQQEHLTKINLLGFSDGANIAMVFTHLYPDFVNKLVLNSGNVTMSGLKKYVTIATYFQYWFCRIGAFFSKKLRARLPIVALLFEDTGLTKQDLEHIPCPTLVITGSRDLIALSHSRAIADAIPDGKLVLVNKQGHLFAKNSPDIFNKTIEKFLKEMKVSK
>NZ_AP017623.1|WP_002366403.1|803854_806386_-|bifunctional-lysylphosphatidylglycerol-flippase/synthetase-MprF
MKQIIHWIKTHTGLLKTLFVIAVSIIVVAQLLSIGKTISFEQLKQIFDEIPLWKLLLMMVIGLVSVTPMLNYDLTLNRILNLKVSKRELLESSWIVNTINNIGGFGGLVSMGLRSEFYGNKTEEKKILPALTHILLFVLSGLSIYSILCFFLVQFDPKMTYLQQYWIWLLGGGLYFPLLYLILHFQKNSSFGNLDAKNRLSLVVSSFLEWTGVLITFISIGYLLDVPIPLIDIVPLYVAASIIGIASMIPGALGSFDVMMILGLSNLGVDREIIVLWLLLYRLFYYIIPFLIGCLFFTKHLSQKLDTHYRQLLKQITLEIAHKLEVVLLYFSGIMMVLLATIPEAFTQVHWLRDINPFRSHIIIQIPSIVLGFALLIMGRGIADRVKRAYYPTIILLIGAILYSFVVDFSMFSIFYLAILLFIVIFSKSELYREQLVYSWEWMTIDGFIFGLLTLLYLVIGVYNLPNFPHHRHHFVEFFLFPSERIWLSGFIAILLVMSFNFLFVRYLQGKKHQVGEFPEDSILHNILTTYGGNIDSELVFLHDKQVFLYPKEEPTVFLQFNTINNKCVVMGNPSGNKEDFPAAIDAFLKETDRFGYVPVFYETNEDSVMLLHEYGYEFIKMGEEALVNLETFTMSGKKFKGTRAVFNKITKAGYSFDVLQPPFSAEQMHELKAISDSWLDNRKEKGFSLGFFDEAYLQRNPIAVVRNAEGEMVSFANIIPSYTNEVGTIDLMRHHKEKAPSGSMDFLFIHLFEYMKTENIHYFNLGMAPLANVGQSRKSFIQERIAALIYEFGSEIYSFQGLREYKEKFASKWQPRYTLYSKSSWIVYVMIALLIVDQKNID
>NZ_AP017623.1|WP_096397630.1|802971_803784_+|kinase/pyrophosphorylase
MKKEIIVYTISDSLGETSQKLLAAASAQYPDISFLNRYNFSFVTTEEELLEILKDALKDKALVVSTLVSKQLITAAKEFSERTGLLYLDLMAPFFGLIQAKAGVDPIEEPGRRHQLDRAYFDKISAIEFAVKYDDGKNPQGFLDSDILLLGVSRTSKTPVSMYLANQGYRVSNLPLIPEVPLPPILEEMDPQKMIGLVCSPEILGQIRSSRLASLGLGNETSYTNVERIEQELAYAEEIFAKYGIPVIDVTAKSVEETAFLIKEKLDERN
>NZ_AP017623.1|WP_002355926.1|802329_802959_+|helix-turn-helix-transcriptional-regulator
MKLSKRQEQIIAVVKEHQPVSGERISDILAVSRATLRSDLSFLTLSGILKASPKVGYTYESDNMEAFFFFDVFQTKVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRASLNTNIDGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKILTYITQQAKEAAQNR
>NZ_AP017623.1|WP_016622306.1|799514_802160_-|pyruvate,-phosphate-dikinase
MKKFIYSFNETHNEGKETLGGKGANLAEMTRLGLPIPQGFTITTRCCMDYLADATFFEEHLQSEILKAVKNLETETGKSFTADNEILLVSVRSGAAFSMPGMMDTILNLGLNDQRVKKFATLTSPGFAFDCYRRLIQMFGDVVYHIPKELFDQQKERLEQELNKKITAFQEADHFALIVRYQEVFEQHQVVFPQDPVAQLFEAIKAVFDSWNNQRAVVYRNLHHIAHDLGTAVNIQEMVFGNRGLDSGTGVVFTRNPVTGENQLFGEFLLNAQGEDVVAGIRTPEPIRRLRLTMPKVYQDFRHYAELLEYHYRDMQDIEFTIENEKLYILQTRNGKRTAAATVKIALDLAKENRITKQEALLRVTPDTIDQLIHPVFDQEKRQHMERLAMGLPASPGAASGQIVFTAEKAKELTNLGKKVILVRQETSPEDIEGMVVSEAIVTSRGGMTSHAAVVARGMGTCCVTGCESLTVNEEAKQLHCGPQVILEGTIISVDGSTGEIYLGEIPTISADNNDDLQELLSWADAYADLTVRANAETTQDLETAIRFGAAGIGLARTEHMFFGEERVLEMRRLILAESEKEATYALEQLLHFQQEDFYQMLKVVQDKPMVVRLLDPPMHEFLPHEKNDIQLLAKQLQRFPVTIAKQIERLQETNPMLGHRGCRLGVTQPQIYKMQVTALFTSAIRLVKEGITVYPEVMIPLIAEKEELLYLKRILKETIDGLFEEHKMTPFPYEIGTMIELPRACLIADQLAEEADFFSFGTNDLTQMTYGFSRDDIGKFINTYREKKIITQDPFQSLDQTGVGQLIQLAVEKARRTKPNMSIGVCGEVGGDPQSITFFQTLGLNYISCSPYRVPIAKLAAAQAKILTEPAVTEEQMVLL
>NZ_AP017623.1|WP_010777500.1|799068_799401_+|antibiotic-biosynthesis-monooxygenase
MAITINIYYSGTNGGAREFAKEMIASGIVEAIRAEKGNSRYEYFFPMDDEETVLLIDSWTDQEALDKHHASPMMTRITELREKYDLHMKVERYVSDVTDPLIKDAAFIRK
>NZ_AP017623.1|WP_172761444.1|797430_798642_+|GNAT-family-N-acetyltransferase
MRGGKKMTTKRVKKMGKEEMKEMFDLVIYAFNQEPTVERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPFSYPFYRQYGYEQTFEQAEYTIKTEDWPRVKRVPGTIKRVSWADGKEVIKDVYLENQRAHSGGVIRETWWLDYTLNRASKPNNQAIYYSSEGKAEGYVIYRIAAGTFEIVEWNYLTNTAFKALAGFIGSHSGSVQSFHWINGFAGKDLNDLMPTPAASVKILPYMMARIVELQTFLEKYPFQSGEKETYSLEIEDSYGPWNEGIWTITIDEQGKATVTKGAVEKEGTAALKADIQTWTQLFLGYRSAETLSFYERLQGDATTAQRLGQRLVKGMPILEDYF
>NZ_AP017623.1|WP_172761446.1|813834_814779_+|phosphotransferase
MEAKVMRAFEKIPAFQQWQKVEAIHRGWSTDLKFKVTKNQETFLLRIFQQEELLAKQQEYQFIKKVAALGFPSSKPFLCAPIPESEQGYMLLTYLEGEDLSDVLPALSPKRQLNLGVEAGRYLNKIHKLLLPEMISQREIARNLYEKKQSQLNKYKESQFCMPYQQPIISYLEKQLPLLQQRPVVYQHGDFHVGNFIYLPTRQVGVIDFNRWDFGDPYEEFYKLQFFSRNVSPLFAYGQLQGYFAGKVPTLFWQFQKLYTFHAGLYSLVWALSFGEKEIRTMEQQYQQLLEDYNCGELLVPKWFSTIQRKGLRF
>NZ_AP017623.1|WP_002361432.1|814821_815475_+|DUF4767-domain-containing-protein
MKLNGIIMIAVVGSVLSGCGWQKSKEESQKVQTVQTNNVNTEETRAISATEVSQTTALELEQTTQTQELTELVTEEGTIWNQQKAKQLGQYMEIWGQERNQNYQAYQPGHSVAFYTIQVPDDLLSYEPKIQPAIGNNPIWLNWSETGSEGGYCLVAVYSDSATQVAQKHVYLFTLVNGEAKVYVSKEQPVEEQPYLFLKETSNTELKEQFTNLVNNL
>NZ_AP017623.1|WP_002381321.1|815584_815995_+|nucleoside-diphosphate-kinase
MEKMKETSLVIIKPDGVERKLVGKIIQRFEDKGIDLLHLKFERLTVETVKEHYEHLKDELFFPELLAYMTSGPVVVMVVVGDNVVKKVRKLVGATNPLDAESGTLRADYGLSVTKNLIHASDSVQSAKIEMQRFFG
>NZ_AP017623.1|WP_002355939.1|816154_817765_+|aspartate-4-decarboxylase
MITSDELTENLSPFELSLFLEKKLHEENHNLETLLNAGRGNPNWTAPTPREAFFLLGQFATKETLREGSEQTAGMIQPSFGRTQRFLNFLAENPSKGATFLQEIWTAEHNYFGMDKEMWLDAMLDYVIGDNYPNPVRCLKACEQPIKAYLNQELFSSEAQPFDIFAVEGGTAGICYLFDTLANNYLLEKGDRIALLLPTFAPYLEIPELPRYDFDVVKIKAEQMIIDGKTTYQYSNKEIDKLKDPSIKAVFVVNPSNPTANAMGKPTIEQIKQIVAVDNPKLMILTDDVYGTFVPAFRSLFTELPYNTACIYSYSKYFGATGWRVGTIAVSQENIFDQLLKELPVARKMELQARYATLNADTSQINFISRLVADSRDIALNHAAGLSSIQQAMMALFSLYALLKDGQAYKDEVMDICHTREKLLFRTLGIEEPLASLNTAYYCEINFRDWTEKRYGPEFSSYLTKSWTITKVLTSLAEKEKLMLLKADAFGSDKWSVRISLANLATNQYSEVGKRMIRLSEHIKEEWLRQKRQAIK
>NZ_AP017623.1|WP_096397634.1|817907_818993_+|hypothetical-protein
MKHIKGMLVFIGLFILVGCAPDQEPTKQTTSGPQETKQVKQVTVTNQTTSAVVKQAPTKNDELIANQLTFDSHEYTYEVVTGATQTTFGTTPPAKYTPEEKKEKMFWSNQPPLGLMTGNYYKNEGVFTGGNYGIVEIITEPETQRILNVEFTEFASDPYYDTRYSGVNKRLSDYPEFQASNTRTDDTLVTVVNGITYVEKQMRDENRVTGNFYTVRGSSTSAREGLMPLAAEMDTWLKEPAKETYIGYAEDLGNGLIGRLQVITEEQKIKHVSYDEYFSDEQEKITETALRPFYRQSKYYSPGYNKQTNNSFIHFVDTLTKAITTQQTLSVNEEQELQHPSFTTYQRLAEKISTFQNSLKE
>NZ_AP017623.1|WP_002355941.1|819108_819912_-|Cof-type-HAD-IIB-family-hydrolase
MKKLIAIDLDGTTLNAQSLISPKTEQTLKKAIDNGHYVSIATGRPYRMSHQFYQQLGLTTPMVNFNGALVHIPEKKWDLESEANIERDLVFDILAQKKELQLDFVAAENKETFYIDTLDGFDPKFFASKATLDNLLTAKNLRTNPTSMMVRTTPNQAEKVADTLTKQYGDYIDVRTWGGPMPILEMVAKGIQKAHGVDQVANFLSVKPADIIAFGDEHNDEEMLSYAGWGVAMNNATDKIKSVANDVTEKTNDQDGLADYLENYLDL
>NZ_AP017623.1|WP_002386206.1|820117_820693_+|DUF1361-domain-containing-protein
MWLFATHFHFMALNVLLAYIPIELSYLLNAEKRKRDWLIGFAWLIFYPNAPYLFTDFFHLETLSIYRGFNTIFANQIGDWWAFVCLTSGIVIYGLLGMKTVTTVSQKLQSYCDYRTIVVFQASLHFLSALAIYVGRFDRLHSVYLFMSPIETVKIIFFDWSLQKLMFILLMMFLQMLLFGLIQLLGKEEAM
>NZ_AP017623.1|WP_002409095.1|820844_822251_+|NCS2-family-permease
MNTFFKLKENKTTVSTEIMAGVTTFFAMSYILFVNPSILSETGMPFQAVFLATIIASIIGTLIMGLFANVPYAQAPGMGLNAFFTFTVVFGMGYTWQQALAMVFICGLINILITVTKIRKMIIKAIPESLQHAIGGGIGIFVAYVGLKNAGLLSFTVQAEPQNGVVNGSSIVPALGNFDNPAIILAVIGLVLTTILVVTNVRGAILIGIVVTTLVAIPMGVVDTASVDWHANSLGNSFKELGTTFGAAFGAEGLQSLFSDSSKIPQVLMTIIAFSLSDTFDTIGTFIGTGRRTGIFSKEDELALEDSKGFSTKMDKALFADAIATSIGAIFGTSNTTTYVESAAGIGAGGRTGLTSVVVAILFALSSLFSPLIAIVPAQATAPALILVGIMMLASFKDINWTDLEDAIPAFFASIFMGLCYSISYGIAAGFIFYAVVKVVKGKAKEVSPIIWIIDALFILNFVILAIL
>NZ_AP017623.1|WP_002381323.1|822459_823656_+|multidrug-efflux-MFS-transporter
MKIKWKQNLLVAWIGCFFTGASISLVMPFIPVYVEQLGTPKSQVELFSGLAISVTAFAAAIVAPIWGNLADRKGRKIMMIRAAAGMTITMGALAFVPNVYWLLIMRFMNGILSGYIPNATAMIASQAPKEKNGWALGTLSTGAIAGTLIAPSIGGALAQWFGMENVFIITGVILFITTLLTIFLVKEDFQPVEKKDLLTTKEIFSKMDHVSVLIGLFVTTLILQLGITSISPILTLYIRSLSGDTENVLFVSGLIVSIAGVSAIISSPTLGKIGDRIGNQKVLLGGLILSFICYIPMAFVQTPFQLGVLRFLLGFSTGALMPSINTLISKITPTEGVSRVYSYNQMCSNFGQVLGPMVGSTVAHGFGYSSVFLVTACFVLGNIGLSFFNFRKVLNKKL
>NZ_AP017623.1|WP_002355945.1|823710_823896_-|YjzD-family-protein
MRYLVVFFWTFALGQVVGYIGGALSGGSYDFKMTTILSLATAVIILLIAHFAVPKETKPVK

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Crispr_ID: NZ_AP017623_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017623_3

1700408-1700558

Orphan

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP017623_3

>merge|NZ_AP017623|3|1700408-1700558|PILER-CR
AACAACATGACTCTAAAACAAAGGCACTCGTTACTACTTCAAAGTAGTTGTTTTGGTACCATTCTAAACAACATGACTCTAAAACTGATAGTTCTGAATAGTTGTGAATTTCATTGTTTTGGTACCATTCTAAACAACATGACTCTAAAAC

>NZ_AP017623|3|2|1700408-1700558|PILER-CR
AACAACATGACTCTAAAACAAAGGCACTCGTTACTACTTCAAAGTAG	TTGTTTTGGTACCATTCTA
AACAACATGACTCTAAAACTGATAGTTCTGAATAGTTGTGAATTTCA	TTGTTTTGGTACCATTCTAAACAACATG
ACTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017623.1\|WP_002364368.1\|1694054_1695821_-\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_AP017623.1\|WP_002398605.1\|1701663_1703913_-\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078
NZ_AP017623.1\|WP_002356983.1\|1687158_1687860_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_AP017623.1\|WP_002356965.1\|1704338_1704908_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
NZ_AP017623.1\|WP_002356959.1\|1708340_1708685_-\|DUF1831-domain-containing-protein	unknown	unknown	gnl\|CDD\|370163
NZ_AP017623.1\|WP_002364369.1\|1695817_1697551_-\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|274323
NZ_AP017623.1\|WP_002362076.1\|1710054_1711029_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|235039
NZ_AP017623.1\|WP_002356966.1\|1703875_1704241_-\|DUF1033-family-protein	unknown	unknown	gnl\|CDD\|336361
NZ_AP017623.1\|WP_002360007.1\|1708752_1709898_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_AP017623.1\|WP_002356962.1\|1705572_1706811_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340949
NZ_AP017623.1\|WP_002360015.1\|1692994_1693975_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_AP017623.1\|WP_002374512.1\|1705040_1705556_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|176643
NZ_AP017623.1\|WP_002360016.1\|1691967_1692873_-\|prenyltransferase	unknown	unknown	gnl\|CDD\|235695
NZ_AP017623.1\|WP_002360017.1\|1690727_1691939_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_AP017623.1\|WP_096397853.1\|1700715_1701579_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_AP017623.1\|WP_002356976.1\|1697555_1698569_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_AP017623.1\|WP_096397852.1\|1687990_1690414_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|224588
NZ_AP017623.1\|WP_002362075.1\|1706990_1708115_-\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_AP017623.1\|WP_010822976.1\|1686291_1687041_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_AP017623.1\|WP_002356974.1\|1698565_1699984_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587

Protein	Function_ID	Function_description	E-value
NZ_AP017623.1\|WP_002364368.1\|1694054_1695821_-\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_AP017623.1\|WP_002398605.1\|1701663_1703913_-\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_AP017623.1\|WP_002356983.1\|1687158_1687860_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	5.36718e-38
NZ_AP017623.1\|WP_002356965.1\|1704338_1704908_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	2.91104e-15
NZ_AP017623.1\|WP_002356959.1\|1708340_1708685_-\|DUF1831-domain-containing-protein	gnl\|CDD\|370163	pfam08866, DUF1831, Putative amino acid metabolism. Solution of the structure of the Lactobacillus plantarum protein from this family has indicated a potential new fold with remote similarities to TBP-like (TATA-binding protein) structures. This similarity, in combination with genomic context analysis, leads us to propose an involvement in amino-acid metabolism. The potentially novel fold is an alpha + beta fold comprising two beta sheets packed against a single helix. The enzyme is present in the cytosol.	1.33245e-53
NZ_AP017623.1\|WP_002364369.1\|1695817_1697551_-\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|274323	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD.	0
NZ_AP017623.1\|WP_002362076.1\|1710054_1711029_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|235039	PRK02458, PRK02458, ribose-phosphate pyrophosphokinase; Provisional.	0
NZ_AP017623.1\|WP_002356966.1\|1703875_1704241_-\|DUF1033-family-protein	gnl\|CDD\|336361	pfam06279, DUF1033, Protein of unknown function (DUF1033). This family consists of several hypothetical bacterial proteins. Many of the sequences in this family are annotated as putative DNA binding proteins but the function of this family is unknown.	4.62165e-64
NZ_AP017623.1\|WP_002360007.1\|1708752_1709898_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	5.37018e-179
NZ_AP017623.1\|WP_002356962.1\|1705572_1706811_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.18762e-174
NZ_AP017623.1\|WP_002360015.1\|1692994_1693975_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.52576e-80
NZ_AP017623.1\|WP_002374512.1\|1705040_1705556_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|176643	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea. PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.	5.33149e-31
NZ_AP017623.1\|WP_002360016.1\|1691967_1692873_-\|prenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	8.82053e-105
NZ_AP017623.1\|WP_002360017.1\|1690727_1691939_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	1.24993e-121
NZ_AP017623.1\|WP_096397853.1\|1700715_1701579_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.29752e-26
NZ_AP017623.1\|WP_002356976.1\|1697555_1698569_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	9.60464e-103
NZ_AP017623.1\|WP_096397852.1\|1687990_1690414_-\|DNA-translocase-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	9.13039e-175
NZ_AP017623.1\|WP_002362075.1\|1706990_1708115_-\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_AP017623.1\|WP_010822976.1\|1686291_1687041_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	2.60838e-110
NZ_AP017623.1\|WP_002356974.1\|1698565_1699984_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0

>NZ_AP017623.1|WP_002356974.1|1698565_1699984_-|cytochrome-ubiquinol-oxidase-subunit-I
MFDIVTLARIQFAMTTVFHFFFVPFSIGLALVVAIMETMYVVKKEERYRKMAKFWGNIFLLSFAVGVVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFTWDKMNPKVHVTFIWLVVFGSMMSAFWILVANSFMQHPVGYVINNGRAEMVDFVAVISNPKVWYEFSHVIMGAFTLGGMAVAGMAAFQLLKKRDISFHKASMRIGLWVTLFGSIGVLLAGDLQMKALIEGQPMKFAAMEGAYEDSDDPAAWTLIAWADEREHKQVFGIDIPYMLSILSYNKLSGSVDGMDTVNKRLVEKYGDDKNYYPPVNTLFWSFRIMAGFGALMLLVAALGLFFTRKKKPSLYEKKWMLWIVALCTFAPFLANTTGWLVTELGRYPWTVYGLFTIEQSVSPNVSVASLITSNVIYFLLFAGLGSVMVYLVILELRKGPDYEAKKLAKENEPALDPFDKGVFGE
>NZ_AP017623.1|WP_002356976.1|1697555_1698569_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MSTLQLLWFVLIGVLFSGFFFLEGFDFGVGMAVQTLAHNDDEKDQVVATIGPVWDGNEVWLLTAGGAMFASFPYWYASLFSGYYLILFTILFGLIIRGVSFEFRHNMPEGKRRRMWNWTLSIGSFLVPFFFGILFISLVQGMPLDANGNMHAQFTDYFNLFSIVGGVALTLLCYLHGMNYIALKTEGPIRERARNYAEILYGVLYVGLVVFAVLMYFKTDFYEKNFAVTLILTLAIVVLTVIANVGVFKRKEMLAFLASGLTLVVLVALLFSGLFPRVMIGSEGFDLLIKDATSTPYTLKIMTWISLSILPFVLAYTAWSYYIFRKRISQTAVPEGY
>NZ_AP017623.1|WP_002364369.1|1695817_1697551_-|thiol-reductant-ABC-exporter-subunit-CydD
MIDKDILQMPKIKKILVLLAGFSFLQAVFIIGQAFFLSKAIVGLWSGGHLNQQLQSILLFFIFYLGRHVITYFRERMLDTFSYERSKELREQLLTKIFRLGPNVVQKNGTGNMVTMALEGISQTENYLQLILTKMMNMMIIPWIILAFVFTQDIRSGVTLLIVFPIIIIFMIVLGYAAQSKADKQYAAFQMLSNHFIDSLRGIDTLKLFGLSKKYAGSIYHTSERFRKATMSTLKIAILSTFALDFFTTLSVAVVAVFLGLSLLNGTILLFPALVTLILAPEFFLPIRDFSSDYHATLDGKNSFQAIQAVLALPEAEQTDVLTLDDWHQESQLSVTALNFSYEDATQEAIQSLQFSVDGRKKIGIIGASGSGKSTLINLLSGFLLPTEETSQLAINGQTIPHFLQKDWQKQILYIPQAPYIFQDTLANNIRFYTPEATDEAIQQAIQLVGLDELVKDLPEGIHTLIGESGRMLSGGQAQRVALARAFVDQKRHVLLFDEPTAHLDIETEVEMKERMLPLMNNHLVFFATHRLHWMEEMDYILVMEKGQLVEQGTLAELIEKDGYYVQLMKQMRGGRQ
>NZ_AP017623.1|WP_002364368.1|1694054_1695821_-|thiol-reductant-ABC-exporter-subunit-CydC
MMEKQPTTKDVWKNDQWVRPFLKRYKKTLYFALLLGFLTFFSAGALMFTSGYLISRAASLPENILLIYIPIVLTRAFGIGRPVFRYVERLTSHNWVLKMTSDLRLKLYNVLEKDAIFFKTKYRTGDILGLLSEDINHIQNLYLRTIFPTVIAWILYIFLVIALGFFSWWFALCMLLMLGVVVFLLPLVSVLVNGARQEKHKYAKNELYQTLTDNILGVSDWVFSQRGSEFVARYETDEANVRALDEKMKQFNRGRDFVLQLLFGVIAIAVLAWTSVRFPGNHGGAANWIGAFVLTVFPLIDAFAPLPAAAQETTIYKDSIRRFNELPEGEDDSTEAPVQPNGTSLSIEHLSFAYENQAKKVLNDLSLTIPEKQKLAILGRSGSGKSTLASLIRGDLRPTSGEILLGNIPTEAFGETMTEYIGVMHQAPYLFRTTILNNIRIGREEASEAEVWAVLEKVGLKEMVTQLPEGLQTMVDEAGLRFSGGERHRLALARILLQDTPIVLLDEPTTGLDPITEQQLLETFFEALKDKTVIWITHHLQGVTLMDQVIFIEDGQLEMSGTPEELLATNAHYQKLYRIDRGISSFEE
>NZ_AP017623.1|WP_002360015.1|1692994_1693975_+|polyprenyl-synthetase-family-protein
MNTFWKSFPDVERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLGDEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLFTEFFTLIADAMNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELFSLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGVYTLPLLFAYQAAPDVFSPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAITDIQQLPDGTAKETLLSLTELLLHRSF
>NZ_AP017623.1|WP_002360016.1|1691967_1692873_-|prenyltransferase
MNREIFFELVELKAKTASVLPFLLGICFSWYQYGRLHVGYVLIFFIAMFIFNMAVDILDNYNDYHHATEVHDYKEKTNIIGRENLSLPLIRKMIFWMILVSALMGIGLSFIVGWPLLIMGLYCYLIGIFYSSGPKPLSSLPLGEVFSGFTMGFMITLICVYINTFEVFNWSAANLWGIFLVALPNTCYIANLMLANNICDLEEDENNKRYTLVHYLGKASSLKLFVGLNTIAMLAILLAVGLGLTPPTMLLMLLTLPFVRKQTQALLKEQVKSKTFVCAVKILAVGATAQVLFFAIGLWWL
>NZ_AP017623.1|WP_002360017.1|1690727_1691939_-|NAD(P)/FAD-dependent-oxidoreductase
MNKKHVVILGAGYAGLKTLRELQKGAKDVEITLVDRNNYHYEATDLHEVAAGTQPAEKITYNIMDVVDEKMTTFIQGTVKTIDAATQTVALEDGQTINYDYLVVSLGFESESFGIPGVQEHALQMVDVKTALNVYEHIQEQMRQYKATQNEEFLKIVVCGAGFTGIELLGSLVENKPKFAEIAGVSADQIQIYCVEAVTRLLPMFNEKLANYGVQLLKDSAIHLLLGKPIKEIKPGAVVYQDNEAGDLAELSAKTIIWTTGVSGSHVVGDSGFEARRGRVMVQPDLTDANHSNVYIIGDCSAVMDTETNRPYPTTAQIALKMGAHAAKNIQAQLKGEATKPFSFKSQGSVCSVGNTRALGIVGKTDIKGYPASFMKKIIMNKALFETGGTKEMMAKGRFDLYH
>NZ_AP017623.1|WP_096397852.1|1687990_1690414_-|DNA-translocase-FtsK
MAQKRATNKKKSTTKKKTKKQQQQQERLNYMFLGLIFILFGVFGLFRLGFLGTLLANCLRLVVGNTFPFAAILLILYGLLVMIYGKDFPLKRGRPIFGAVLIYISVLLFFHAFMFRNVSGSQPDILGNTWEFLQSDLKANQVTQNVGGGMIGALLYQGTYFLVAQFGSYLIATLLLLAGIFLMSMWDFQQIVDHFQSIQDRLSHVSAKSQARQEEKEAKRAAKKEARAAERQAKIEAAAQQKLQERERMEQAAAERLTKTPVETHQPMVEEPAAPTPVQIDSFQQQNQAMPVPPIAATKPQREQEEEASDEAGVLEFEISEEAEDRDYQLPPTDLLDTIQATDQSGEYEKIEKNIGVLEQTFKSFGVDAKVVKASLGPSVTKFEVQPAVGVKVSKIVNLTDDIALALAAKDVRMEAPIPGKSLIGIEVPNSAISTVSFRDIVEAQPSHPDKLLEVPLGRDISGMVQTADLSKMPHLLIAGSTGSGKSVAINGIITGILMQAKPHEVKLMMIDPKMVELNVYNGIPHLLTPVVTNPRKAAQALQKVVQEMEFRYEKFAATGVRNITGYNQLIQQKNAEDGENRPILPFIVVIVDELADLMMVASNEVEDAIIRLAQMARAAGIHMILATQRPSVDVITGIIKANVPSRMAFAVSSGTDSRTIIDTNGAEKLLGRGDMLFLPMGENKPIRIQGAFISDQEVERVVAFVTDQQEAEYQESMMPTDEPTTSGGGEAPQDELFEEAKNLVVEMQTASISLLQRRFRIGYNRAARLVDELEAHGVIGPSEGSKPRKVFLQAESEEAATETPEQ
>NZ_AP017623.1|WP_002356983.1|1687158_1687860_-|GntR-family-transcriptional-regulator
MRRKSVLYLEVADQIKEDILSGKYPVGTFLPTETELEEMFNVSKITIRRAIEMLATEEFVEKKSGRGTTVLSNRPYNKLSKAGTFTEFLNESGQKVTKKVLQVENLTLSKEMPAYQFLGEEVVHLSRLYLIDEQPYIYFNYYLPAAMKDVSLTEYKEESLYRLMDRHAIEIYKFEDRFEVATLTEAEQKMLQTTETTGLKRIRRSLSPTGRCVEYSEAIYNTKIHPYVIEYEA
>NZ_AP017623.1|WP_010822976.1|1686291_1687041_-|ABC-transporter-ATP-binding-protein
MLEVQNLKKVYGNEIKYEALKGINLTVQDGEFIGIMGPSGSGKSTLLNLLATIDSPTDGEILLNGKNPNNLNQEQIAKFRRTELGFVFQSFNLMPTLTVEENIILPLTLDGEKVSVMKRQLAELSERLGINHLLKKRIAEISGGQAQRVAVARAMIHHPQLLLADEPTGNLDTKSSKDVMGLLQQLNEEEAATILMVTHDPLAASYCKRIVFIKDGELIDEIVQNGNQKEFYDLIMMKLAEIEGVDNEF
>NZ_AP017623.1|WP_096397853.1|1700715_1701579_-|AraC-family-transcriptional-regulator
MLANLNQAMDYIEEHLTEEVSFDELAKKTGISVYHFKRTFSFVAGMSLAEYIKKRRLAEANLALLAGEKVTDVAFKYGYQSIEGFSRAFRDWSGQAPSEVMKTQIQKTFPKFSFYIDIKGGQSMDVKLIEKPAFQIVGVSQKVPLQYQGENQAIMELAQRITPQQRAEMHTFDDIYPHQVVNASFDFQEGRTTEGGEMTHMIGFATSQENTYEDLEQLSVPAHTWAVFPNEGPFPQTLQETWAKIFSEWLPSSGYQVVAAPEISFTQYQGPAEAKYSEIWLAVTATK
>NZ_AP017623.1|WP_002398605.1|1701663_1703913_-|DNA-topoisomerase-III
MAKQNSANGKLFETHEFKEKPQGIFFKLFFYSRNLEKIELIFGIIRKDSTQKGAKLVVAKQLIIAEKPSVAKDLSRVLGANQKNKNYYEGPNVIVTWALGHLLGLKMPEDLNKEWQTWQMETLPMIPKNLGIKPLPKTGHQLKAIKQLANRKDVSEAVIATDAGREGELVARWILEYVRFNKPVKRLWISSQTDKAIKDGFKKIRPAKDYDNLYYSALARAKADWLVGLNVTRALTVKYQDNLSAGRVQTPTLAMVRQQEKTIEQFKPQTYFTISLTVESEKAKMTQKNPYALKERQEAEQLVKELSKQKGLVTDIQEKVKTENAPLPYDLTEIQREANQRFQFSAKKTLSLVQSLYETHKIVSYPRTDSKYLTTDMKGTMKERLQAIADFSPEVKGYLKNGAVVKQQKVFQNAKVTDHHGLIPTEQRPRYEKLSNDEQKIYQMIVQRFLGLFAEPNQTKQTKVTVAFGKETFVFHQNKVVVAGWKTTAEQPLSTVQWQKGMTVAPNFTINKELTSPPKPLTEGTLLGKMEKHSLGTPATRAEIIEKLIKSELMERTNSGLSVSAKGKQLLDLVNPSLVTPELTEKWEKSLEAIASGQQKSQLFLKDIEEDTKKLVREIKQSEKKYQDFSITQKKCPDCGSNLREKNTKDGKIYVCTDQECSYRRRKDPKVSNHRCPQCHKKMVIIEGKNGRSFKCKFCSITEKIPDKKERKQKMTKHEERRLMKKYSQPDEPEESALAQALKAAMNQE
>NZ_AP017623.1|WP_002356966.1|1703875_1704241_-|DUF1033-family-protein
MYQVITMYGDNEPWWFFDDWQEDIVQEKTFDNLTDAETYYVEVWQKLSQNYTYVNTKPNYLTAFWNDGEERWCEECDEDLQQYFGLALLENHHAVTFENKAEFTTISNHFGKTKFCKRKVI
>NZ_AP017623.1|WP_002356965.1|1704338_1704908_-|TetR/AcrR-family-transcriptional-regulator
MAKKRNLTKAKILESARNLAEELGVQQLTFQNLAVDLGIKYPSLYNHFKNIAEVKNALVDLLIQELNDALRRALVGKSGAEAIRIYAETYQQFAFENSAVYELLISVPKTQNQQLIEGIHETNQIILQLLAFYPFNNEERLHKSRELRSLIHGYITLRFLGYFQREEATPEESYRRMIEDFIASLEVAG
>NZ_AP017623.1|WP_002374512.1|1705040_1705556_+|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MHITNRSHLADRYGKRTSAEFLLHERPILSFPISLAAIPKEARYLSWELIDYDTIPLIGFPFIHWLAANVPVTNEIPEDFSRTALKPTIQGKNSLASPLGKQMIPALATETLPELTERYLGLSPRSGVHTYTLYVYATKNPLNLKEGFFANELHQALIDQRLAKAKFEFLY
>NZ_AP017623.1|WP_002356962.1|1705572_1706811_+|multidrug-efflux-MFS-transporter
MYELIKSKIFRPRQPWEKNLLVLWFGTFMAGIGFSLVMPFMPLYINTLGTFTHQQLNFWSGITFSSTFLVTTIVSPWWGRLADRKGRKLMLLRASLGMAIVISLMGAVTSVYQLIGLRLLQGVFSGYISNATALVATGTPKEKSGQVLGTLATGSVTGTLLGPLLGGVTASIFGYRPTFFITGTILLLVFVLSLVFVHEEFVPIEKNQAASGKQILKKLEHPHVILGMFITTLIIQASNNSISPIISLYIQQLLGGHGNVTLISGVIASIPGIATLIAAPRFGRLGDRIGSERILTIGLILAIFVYLPMAFVQNVWQLAMLRFLVGISDACLLPAVQTLITRYSPSDAAGRIFSYNQSFQATGNVIGPMIGSSVSAAFGYRGVFISTSCLVLINLLWVRRSTAELKKEKNDD
>NZ_AP017623.1|WP_002362075.1|1706990_1708115_-|tRNA-2-thiouridine(34)-synthase-MnmA
MADNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVAKVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFLDYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGGMEKSEVRAIAERAGLATAKKKDSTGVCFIGEKNFKEFLSNYLPAKKGNMVTEDGEIKGQHDGLMYYTIGQRQGLGIGGGGKTQEPWFVIGKDLTTNTLYVGQGFHHEKLYATHLEASEVHFTVDTPMPKEFDCTAKFRYRQADIPVHVSLSEDGTKATVTFKEPARAVTPGQAVVFYDGMECLGGGLIDRAYQDEKELQYV
>NZ_AP017623.1|WP_002356959.1|1708340_1708685_-|DUF1831-domain-containing-protein
MAFTTTAAVEGSTVFYKVHPSAKRYTLKDNGFTETKSGNFQLIRSLDPTPQRNEGFKLKITITADLKELKMSITTANGLKPMNIFKNEQHEMSKEKYFFLMDGLISRGVLEKVE
>NZ_AP017623.1|WP_002360007.1|1708752_1709898_-|cysteine-desulfurase
MEPIYLDHAATTPLHPTVIQAMTENMQTTFGNPSSIHQFGRKAHGLLEEVRQTIAESLQAKPHEIIFNSGGTEGDNTAILAVAFSRQKEGKHIITTAIEHPAVLRTMEYLETLGFEVTYLPVNENGQISMDQFKKSLREETILVSMMYGNNEIGNRLPIAEVGAILKNHSAIFHTDAVQAYGSEVILPHELGIDLLSISAHKINGPKGVGFLFKSDAIQLPPLLHGGEQEEKRRAGTENLAGIIGMGTAVSLLTSAEKQARKTAYQSFQTIILKALEEANIDFSINGEPTNRLAHVLNLHLKGIPSDLLLMHLDLRGIAISTGSACTAGTVDPSHVLTAMYGENSSAIKESIRISFGYGNTPEEIATFSEVLVAVIQQLKK
>NZ_AP017623.1|WP_002362076.1|1710054_1711029_-|ribose-phosphate-diphosphokinase
MTENYQDDTLRIFSLNANRPLAEKIAASVGTELGKSTVRQFSDGEIQINIEESIRGDHVYIIQATNAPVNDHLMELLILIDALKRASAKTINVILPYYGYARQDRTAKPREPITAKLVANMLVEAGATRLLTLDLHTVQVQGFFDIPVDNLFTMPLFAHYYRQQALVGEEIVIVSPKNSGVQRARSLSEYLDATLAIVDHEEIDGVRQEGYVIGNVAGKKCILVDDILNTGQTLATAAEVLMKNGAQEVYACASHGLLSEGAKATLENAPIKEISITDSVYTTADRQPATLNIISCAELMGEALLRIHENKPMSPLFRLEPKGE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MH375074	Enterococcus phage LY0323, complete genome	14191-14220	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MH355583	Enterococcus phage vB_EfaS_LM99, complete genome	25256-25285	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK721199	Enterococcus phage vB_EfaS_Ef5.1, complete genome	25294-25323	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK360024	Enterococcus phage vB_EfaS_Max, complete genome	26997-27026	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	CAJDJX010000002	Enterococcus phage Q69 genome assembly, contig: phageQ69-genome, whole genome shotgun sequence	28839-28868	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MT857001	Enterococcus phage EFA1, complete genome	26140-26169	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	KT932701	Enterococcus phage vB_EfaS_IME196, complete genome	25559-25588	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_042023	Enterococcus phage phiSHEF5, complete genome	15973-16002	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_042101	Enterococcus phage PMBT2, complete genome	26219-26248	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MH203383	Ecterococcus phage vB_EfaS_AL3, complete genome	27301-27330	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK721200	Enterococcus phage vB_EfaS_Ef5.3, complete genome	25586-25615	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_042022	Enterococcus phage phiSHEF4, complete genome	19571-19600	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MT520979	Enterococcus phage vB_EfaS-271, complete genome	27170-27199	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MH193369	Enterococcus phage LY0322, complete genome	13774-13803	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_031260	Enterococcus phage Ec-ZZ2, complete genome	4183-4212	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK721186	Enterococcus phage vB_EfaS_Ef5.2, complete genome	25777-25806	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_042021	Enterococcus phage phiSHEF2, complete genome	26175-26204	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	JX193904	Enterococcus phage EfaCPT1, complete genome	24158-24187	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_042126	Enterococcus phage vB_EfaS_AL3, complete genome	27301-27330	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	KX284704	Enterococcus phage SANTOR1, complete genome	23374-23403	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	KJ127304	Enterococcus phage AUEF3, partial genome	16779-16808	0	1.0
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	AP018715	Enterococcus phage phiM1EF22 DNA, complete sequence	102323-102352	0	1.0
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	MK721192	Enterococcus phage vB_EfaM_Ef2.3, complete genome	139569-139598	0	1.0
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	AP018714	Enterococcus phage phiEF17H DNA, complete sequence	104582-104611	0	1.0
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	NC_029026	Enterococcus phage EFLK1, complete genome	28682-28711	0	1.0
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	MN995824	UNVERIFIED: Enterococcus phage EFP1, complete genome	36007-36036	0	1.0
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	MT747435	Enterococcus phage AE4_2, complete genome	36014-36043	0	1.0
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	NC_028671	Enterococcus phage vB_EfaS_IME197, complete genome	19487-19516	0	1.0
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	KJ817854	Enterococcus phage MSF1 putative holin gene, complete cds; and muramidase GH25 gene, partial cds	809-838	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP018066	Enterococcus faecium strain E1 plasmid pE1_230, complete sequence	185009-185038	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	55789-55818	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	59349-59378	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP031028	Enterococcus faecalis strain TY1 isolate flatfish plasmid pDEF-1, complete sequence	51643-51672	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP019514	Enterococcus faecalis strain CLB21560 plasmid pB, complete sequence	24784-24813	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP036247	Enterococcus faecalis R712 plasmid pR712_01, complete sequence	6237-6266	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP028838	Enterococcus faecalis strain FC plasmid unnamed3, complete sequence	37319-37348	0	1.0
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP028722	Enterococcus faecalis strain CVM N48037F plasmid pN48037F-2, complete sequence	13544-13573	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MH193369	Enterococcus phage LY0322, complete genome	13433-13460	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MT857001	Enterococcus phage EFA1, complete genome	26483-26510	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK721190	Enterococcus phage vB_EfaS_Ef6.4, complete genome	25586-25613	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MH203383	Ecterococcus phage vB_EfaS_AL3, complete genome	27644-27671	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_042022	Enterococcus phage phiSHEF4, complete genome	19914-19941	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	KF728385	Enterococcus phage IME_EF3, complete genome	27555-27582	0	1.0
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_042126	Enterococcus phage vB_EfaS_AL3, complete genome	27644-27671	0	1.0
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	KF728385	Enterococcus phage IME_EF3, complete genome	27212-27241	1	0.967
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK721190	Enterococcus phage vB_EfaS_Ef6.4, complete genome	25243-25272	1	0.967
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	NC_042127	Enterococcus phage vB_EfaS_AL2, complete genome	14027-14056	1	0.967
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MG264739	UNVERIFIED: Enterococcus phage phiNASRA1, complete genome	2703-2732	1	0.967
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	CAJDKF010000002	Enterococcus phage vB_EfaS_159 genome assembly, contig: phage159-genome, whole genome shotgun sequence	28650-28679	1	0.967
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	KF733017	Enterococcus phage IME-EF4, complete genome	14831-14860	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	MK268686	Enterococcus phage vB_EfaH_EF1TV, complete genome	138195-138224	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	NC_009904	Enterococcus phage phiEF24C, complete genome	98350-98379	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	AP009390	Enterococcus phage phiEF24C DNA, complete genome	98350-98379	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	AB609718	Enterococcus phage phiEF24C-P2 DNA, complete genome	98350-98379	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	MK693030	Enterococcus phage vB_EfaM_Ef2.1, complete genome	136430-136459	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	CAJDJY010000002	Enterococcus phage 156 genome assembly, contig: phage156-genome, whole genome shotgun sequence	102890-102919	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	MN854830	Enterococcus phage PBEF129, complete genome	137815-137844	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	LR031359	Enterococcus phage 156, complete genome	102890-102919	1	0.967
NZ_AP017623_1	1.7\|421486\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421486-421515	30	KJ801817	Enterococcus phage ECP3, complete genome	138937-138966	1	0.967
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	GQ478088	Enterococcus phage phiFL4A, complete genome	36287-36316	1	0.967
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP028722	Enterococcus faecalis strain CVM N48037F plasmid pN48037F-2, complete sequence	10117-10146	1	0.967
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	CP002494	Enterococcus faecalis 62 plasmid EF62pC, complete sequence	26779-26808	1	0.967
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP008814	Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence	34254-34283	1	0.967
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP008814	Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence	37568-37597	1	0.967
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP046110	Enterococcus faecalis strain 133170041-3 plasmid pTEF2, complete sequence	15535-15564	1	0.967
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_042127	Enterococcus phage vB_EfaS_AL2, complete genome	13686-13713	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MG264739	UNVERIFIED: Enterococcus phage phiNASRA1, complete genome	2362-2389	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_031260	Enterococcus phage Ec-ZZ2, complete genome	3842-3869	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	KF733017	Enterococcus phage IME-EF4, complete genome	14490-14517	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK721199	Enterococcus phage vB_EfaS_Ef5.1, complete genome	25637-25664	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK721191	Enterococcus phage vB_EfaS_Ef5.4, complete genome	25819-25846	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK360024	Enterococcus phage vB_EfaS_Max, complete genome	27340-27367	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	CAJDJX010000002	Enterococcus phage Q69 genome assembly, contig: phageQ69-genome, whole genome shotgun sequence	29182-29209	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	KT932701	Enterococcus phage vB_EfaS_IME196, complete genome	25902-25929	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_042101	Enterococcus phage PMBT2, complete genome	26562-26589	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK721200	Enterococcus phage vB_EfaS_Ef5.3, complete genome	25929-25956	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MT520979	Enterococcus phage vB_EfaS-271, complete genome	27513-27540	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK982307	Enterococcus phage MSF2, complete genome	32419-32446	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	CAJDKF010000002	Enterococcus phage vB_EfaS_159 genome assembly, contig: phage159-genome, whole genome shotgun sequence	28993-29020	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK721186	Enterococcus phage vB_EfaS_Ef5.2, complete genome	26120-26147	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	JX193904	Enterococcus phage EfaCPT1, complete genome	24501-24528	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	KX284704	Enterococcus phage SANTOR1, complete genome	23717-23744	1	0.964
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	KJ127304	Enterococcus phage AUEF3, partial genome	17122-17149	1	0.964
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK721191	Enterococcus phage vB_EfaS_Ef5.4, complete genome	25476-25505	2	0.933
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK721187	Enterococcus phage vB_EfaS_Ef6.1, complete genome	25547-25576	2	0.933
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP046110	Enterococcus faecalis strain 133170041-3 plasmid pTEF2, complete sequence	12220-12249	2	0.933
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP015885	Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence	38398-38427	2	0.933
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MH375074	Enterococcus phage LY0323, complete genome	13850-13877	2	0.929
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_042023	Enterococcus phage phiSHEF5, complete genome	15632-15659	2	0.929
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MH355583	Enterococcus phage vB_EfaS_LM99, complete genome	25599-25626	2	0.929
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	NC_042021	Enterococcus phage phiSHEF2, complete genome	26518-26545	2	0.929
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK721187	Enterococcus phage vB_EfaS_Ef6.1, complete genome	25890-25917	2	0.929
NZ_AP017623_1	1.1\|421089\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421089-421118	30	MK982307	Enterococcus phage MSF2, complete genome	32076-32105	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	GQ478082	Enterococcus phage phiFL1B, complete genome	36853-36882	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	GQ478087	Enterococcus phage phiFL3B, complete genome	38182-38211	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	GQ478083	Enterococcus phage phiFL1C, complete genome	36584-36613	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	GQ478085	Enterococcus phage phiFL2B, complete genome	34691-34720	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	NC_013646	Enterococcus phage phiFL1A, complete genome	36629-36658	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	NC_013648	Enterococcus phage phiFL3A, complete genome	37483-37512	3	0.9
NZ_AP017623_1	1.9\|421618\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421618-421647	30	NC_013643	Enterococcus phage phiFL2A, complete genome	34132-34161	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP018066	Enterococcus faecium strain E1 plasmid pE1_230, complete sequence	188314-188343	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	52484-52513	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	56044-56073	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP031028	Enterococcus faecalis strain TY1 isolate flatfish plasmid pDEF-1, complete sequence	48338-48367	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP019514	Enterococcus faecalis strain CLB21560 plasmid pB, complete sequence	21479-21508	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP036247	Enterococcus faecalis R712 plasmid pR712_01, complete sequence	2311-2340	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP028838	Enterococcus faecalis strain FC plasmid unnamed3, complete sequence	33393-33422	3	0.9
NZ_AP017623_1	1.11\|421750\|30\|NZ_AP017623\|CRISPRCasFinder,CRT	421750-421779	30	NZ_CP015885	Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence	35085-35114	3	0.9
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MT119359	Enterococcus phage heks, complete genome	30267-30294	4	0.857
NZ_AP017623_3	3.2\|1700521\|28\|NZ_AP017623\|PILER-CR	1700521-1700548	28	MK125140	Enterococcus phage Nonaheksakonda, complete genome	26825-26852	4	0.857
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	CAJCJZ010000002	Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence	3812-3842	5	0.839
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	LT615366	Enterococcus phage VPE25 genome assembly, chromosome: VPE25	82165-82195	5	0.839
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	LT546029	Enterococcus phage VFW genome assembly, chromosome: VFW	81494-81524	5	0.839
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	LT546030	Enterococcus phage VPE25 genome assembly, chromosome: I	82165-82195	5	0.839
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	MT119360	Enterococcus phage nattely, complete genome	81386-81416	5	0.839
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592544	Vibrio phage 1.177.O._10N.286.45.E10, partial genome	10872-10901	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592501	Vibrio phage 1.127.O._10N.286.52.E12, partial genome	10818-10847	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592595	Vibrio phage 1.231.O._10N.261.49.F8, partial genome	9780-9809	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592514	Vibrio phage 1.143.O._10N.261.55.C8, partial genome	9781-9810	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592664	Vibrio phage 2.095.A._10N.286.46.E10, partial genome	9677-9706	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592665	Vibrio phage 2.095.B._10N.286.46.E10, partial genome	9676-9705	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MN693673	Marine virus AFVG_250M950, complete genome	17464-17493	5	0.833
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MG592494	Vibrio phage 1.119.O._10N.261.51.A9, partial genome	9781-9810	5	0.833
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NC_007110	Rickettsia felis URRWXCal2 plasmid pRF, complete sequence	24337-24367	6	0.806
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NC_019229	Rickettsia felis plasmid pRF, complete sequence	24366-24396	6	0.806
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NC_006129	Borreliella bavariensis PBi plasmid lp54, complete sequence	5681-5710	6	0.8
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP010109	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence	62325-62354	6	0.8
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	AP014286	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C155, * SEQUENCING IN PROGRESS *	9360-9389	6	0.8
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	ACSJ01000012	Clostridium phage D-1873 CLG.Contig163, whole genome shotgun sequence	5488-5517	6	0.8
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NC_048182	Edwardsiella virus pEt-SU, complete genome	90452-90482	7	0.774
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP029457	Bacillus cereus strain FORC087 plasmid pFORC087.3, complete sequence	26298-26327	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP029457	Bacillus cereus strain FORC087 plasmid pFORC087.3, complete sequence	26352-26381	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MN693317	Marine virus AFVG_25M47, complete genome	39979-40008	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	189018-189047	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	80726-80755	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP015728	Bacillus cereus strain A1 plasmid pBCA2, complete sequence	51786-51815	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP015728	Bacillus cereus strain A1 plasmid pBCA2, complete sequence	51840-51869	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MN693190	Marine virus AFVG_25M52, complete genome	27803-27832	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MN693247	Marine virus AFVG_25M51, complete genome	27587-27616	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NC_019772	Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence	17488-17517	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	11662-11691	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	112621-112650	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	308331-308360	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	NZ_CP022346	Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence	308385-308414	7	0.767
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	MT774382	CrAssphage cr10_1, complete genome	36092-36121	7	0.767
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NZ_CP007650	Lactobacillus salivarius strain JCM1046 plasmid pCTN1046, complete sequence	16402-16432	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NZ_CP027401	Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence	32898-32928	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	191809-191839	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NC_006827	Enterococcus faecalis plasmid pCF10, complete sequence	41019-41049	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	KY065497	Streptococcus phage IPP61, complete genome	11822-11852	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	MN693105	Marine virus AFVG_25M79, complete genome	23766-23796	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	HQ634190	Cyanophage Syn2 genomic sequence	39634-39664	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	MN693097	Marine virus AFVG_25M78, complete genome	25204-25234	8	0.742
NZ_AP017623_1	1.2\|421155\|31\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421155-421185	31	NC_015286	Synechococcus phage Syn19, complete genome	105526-105556	8	0.742
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NZ_CP040642	Agrobacterium sp. T29 plasmid unnamed2, complete sequence	144573-144602	8	0.733
NZ_AP017623_1	1.5\|421354\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421354-421383	30	AP014358	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C94, * SEQUENCING IN PROGRESS *	17196-17225	8	0.733
NZ_AP017623_1	1.6\|421420\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421420-421449	30	NZ_CP022750	Sphingobium hydrophobicum strain C1 plasmid p4, complete sequence	25577-25606	8	0.733
NZ_AP017623_1	1.6\|421420\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421420-421449	30	NZ_CP009453	Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence	200056-200085	8	0.733
NZ_AP017623_1	1.10\|421684\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421684-421713	30	NZ_HG938357	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence	106370-106399	8	0.733
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP012531	Stx2-converting phage Stx2a_F422 proviral DNA, complete genome	39971-40000	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG792102	Escherichia phage P13803, complete genome	41394-41423	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682385	Escherichia phage PA33, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG803184	Escherichia phage P13353 complete genome	41394-41423	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682382	Escherichia phage PA29, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KU298437	Escherichia phage phiON-2011, complete genome	41394-41423	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682389	Escherichia phage PA45, complete genome	42090-42119	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG803185	Escherichia phage P13357 complete genome	41394-41423	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682374	Escherichia phage PA8, complete genome	44650-44679	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HE664024	Escherichia phage P13374 complete proviral genome	41392-41421	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682383	Escherichia phage PA30, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG792104	Escherichia phage P13771, complete genome	41666-41695	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_000924	Enterobacteria phage 933W, complete genome	38658-38687	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	MG710528	Escherichia phage GER2, complete genome	59122-59151	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_049924	Stx2-converting phage Stx2a_F451 proviral DNA, complete genome	45967-45996	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG792105	Escherichia phage P14437, complete genome	41918-41947	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_004914	Stx2 converting phage II DNA, complete genome	8645-8674	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG792103	Escherichia phage P8983, complete genome	41796-41825	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682381	Escherichia phage PA28, complete genome	41813-41842	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682375	Escherichia phage PA11, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	MG986485	Escherichia phage SH2026Stx1, complete genome	41199-41228	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682387	Escherichia phage PA42, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AF125520	Bacteriophage 933W, complete genome	38658-38687	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KU238068	Stx converting phage vB_EcoS_P32, complete genome	39065-39094	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KU238070	Stx converting phage vB_EcoS_ST2-8624, complete genome	40013-40042	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682384	Escherichia phage PA32, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682386	Escherichia phage PA36, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP012533	Stx2-converting phage Stx2a_F723 proviral DNA, complete genome	43307-43336	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682376	Escherichia phage PA12, complete genome	38144-38173	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP000422	Enterobacteria phage VT2-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7	40013-40042	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	MT225101	Escherichia phage Lys19259Vzw, complete genome	42105-42134	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682391	Escherichia phage PA51, complete genome	38144-38173	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682388	Escherichia phage PA44, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KU977419	Stx1 converting phage AU5Stx1, complete genome	39457-39486	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	JQ011318	Escherichia phage TL-2011c, complete genome	41111-41140	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP004402	Stx2 converting phage I DNA, complete genome	8644-8673	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682372	Escherichia phage PA4, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682377	Escherichia phage PA16, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_000902	Enterobacteria phage VT2-Sakai, complete genome	37699-37728	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HM208303	Stx2 converting phage vB_EcoP_24B, complete genome	38783-38812	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP000363	Enterobacteria phage VT2-Sakai proviral DNA, complete genome	37699-37728	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KY914478	Escherichia phage ArgO145, complete genome	43077-43106	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG803182	Escherichia phage P13363 complete genome	41394-41423	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682380	Escherichia phage PA27, complete genome	40777-40806	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP005153	Stx1 converting phage DNA, complete genome	8644-8673	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP012534	Stx2-converting phage Stx2a_F765 proviral DNA, complete genome	43329-43358	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HQ424691	Enterobacteria phage VT2phi_272, complete sequence	46014-46043	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682379	Escherichia phage PA21, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682373	Escherichia phage PA5, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_049923	Stx2-converting phage Stx2a_WGPS9 proviral DNA, complete genome	33119-33148	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_029120	Shigella phage 75/02 Stx, complete genome	38093-38122	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KU977420	Stx1 converting phage AU6Stx1, complete genome	38209-38238	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	HG803183	Escherichia phage P13368 complete genome	41394-41423	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682371	Escherichia phage PA2, complete genome	44635-44664	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682378	Escherichia phage PA18, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KU238069	Stx converting phage vB_EcoS_P22, complete genome	39056-39085	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_049925	Stx converting phage vB_EcoS_P27, complete genome	39771-39800	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_018846	Escherichia phage P13374, complete genome	41392-41421	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682390	Escherichia phage PA50, complete genome	39464-39493	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_010237	Enterobacteria phage Min27, complete genome	40337-40366	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_028685	Shigella phage Ss-VASD, complete genome	43309-43338	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	KP682392	Escherichia phage PA52, complete genome	40777-40806	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	AP012529	Stx2-converting phage Stx2a_F403 proviral DNA, complete genome	40357-40386	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NZ_CP044141	Escherichia coli O157 strain AR-0430 plasmid pAR-0430-4	48305-48334	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_028660	Escherichia phage phi191, complete genome	53430-53459	9	0.7
NZ_AP017623_1	1.4\|421288\|30\|NZ_AP017623\|PILER-CR,CRISPRCasFinder,CRT	421288-421317	30	NC_049917	Escherichia phage Lys12581Vzw, complete genome	1617-1646	9	0.7

1. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MH375074 (Enterococcus phage LY0323, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

2. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MH355583 (Enterococcus phage vB_EfaS_LM99, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

3. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721199 (Enterococcus phage vB_EfaS_Ef5.1, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

4. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

5. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to CAJDJX010000002 (Enterococcus phage Q69 genome assembly, contig: phageQ69-genome, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

6. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MT857001 (Enterococcus phage EFA1, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

7. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KT932701 (Enterococcus phage vB_EfaS_IME196, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

8. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_042023 (Enterococcus phage phiSHEF5, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

9. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_042101 (Enterococcus phage PMBT2, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

10. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MH203383 (Ecterococcus phage vB_EfaS_AL3, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

11. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721200 (Enterococcus phage vB_EfaS_Ef5.3, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

12. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_042022 (Enterococcus phage phiSHEF4, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

13. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MT520979 (Enterococcus phage vB_EfaS-271, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

14. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MH193369 (Enterococcus phage LY0322, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

15. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_031260 (Enterococcus phage Ec-ZZ2, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

16. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

17. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_042021 (Enterococcus phage phiSHEF2, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

18. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to JX193904 (Enterococcus phage EfaCPT1, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

19. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_042126 (Enterococcus phage vB_EfaS_AL3, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

20. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KX284704 (Enterococcus phage SANTOR1, complete genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

21. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KJ127304 (Enterococcus phage AUEF3, partial genome) position: , mismatch: 0, identity: 1.0

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtaa	Protospacer
******************************

22. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP018715 (Enterococcus phage phiM1EF22 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttaca	Protospacer
******************************

23. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721192 (Enterococcus phage vB_EfaM_Ef2.3, complete genome) position: , mismatch: 0, identity: 1.0

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttaca	Protospacer
******************************

24. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP018714 (Enterococcus phage phiEF17H DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttaca	Protospacer
******************************

25. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_029026 (Enterococcus phage EFLK1, complete genome) position: , mismatch: 0, identity: 1.0

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttaca	Protospacer
******************************

26. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN995824 (UNVERIFIED: Enterococcus phage EFP1, complete genome) position: , mismatch: 0, identity: 1.0

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccgctagcattgtagccaccaatct	Protospacer
******************************

27. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MT747435 (Enterococcus phage AE4_2, complete genome) position: , mismatch: 0, identity: 1.0

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccgctagcattgtagccaccaatct	Protospacer
******************************

28. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_028671 (Enterococcus phage vB_EfaS_IME197, complete genome) position: , mismatch: 0, identity: 1.0

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccgctagcattgtagccaccaatct	Protospacer
******************************

29. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KJ817854 (Enterococcus phage MSF1 putative holin gene, complete cds; and muramidase GH25 gene, partial cds) position: , mismatch: 0, identity: 1.0

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccgctagcattgtagccaccaatct	Protospacer
******************************

30. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP018066 (Enterococcus faecium strain E1 plasmid pE1_230, complete sequence) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

31. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

32. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

33. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP031028 (Enterococcus faecalis strain TY1 isolate flatfish plasmid pDEF-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

34. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP019514 (Enterococcus faecalis strain CLB21560 plasmid pB, complete sequence) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

35. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP036247 (Enterococcus faecalis R712 plasmid pR712_01, complete sequence) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

36. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP028838 (Enterococcus faecalis strain FC plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

37. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP028722 (Enterococcus faecalis strain CVM N48037F plasmid pN48037F-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgact	Protospacer
******************************

38. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MH193369 (Enterococcus phage LY0322, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

39. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MT857001 (Enterococcus phage EFA1, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

40. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK721190 (Enterococcus phage vB_EfaS_Ef6.4, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

41. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MH203383 (Ecterococcus phage vB_EfaS_AL3, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

42. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_042022 (Enterococcus phage phiSHEF4, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

43. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to KF728385 (Enterococcus phage IME_EF3, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

44. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_042126 (Enterococcus phage vB_EfaS_AL3, complete genome) position: , mismatch: 0, identity: 1.0

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatagttgtgaatttca	Protospacer
****************************

45. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KF728385 (Enterococcus phage IME_EF3, complete genome) position: , mismatch: 1, identity: 0.967

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgtag	Protospacer
*****************************.

46. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721190 (Enterococcus phage vB_EfaS_Ef6.4, complete genome) position: , mismatch: 1, identity: 0.967

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgcaa	Protospacer
***************************.**

47. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_042127 (Enterococcus phage vB_EfaS_AL2, complete genome) position: , mismatch: 1, identity: 0.967

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgcaa	Protospacer
***************************.**

48. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG264739 (UNVERIFIED: Enterococcus phage phiNASRA1, complete genome) position: , mismatch: 1, identity: 0.967

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatacgtttcgctttggtgtaa	Protospacer
************.*****************

49. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to CAJDKF010000002 (Enterococcus phage vB_EfaS_159 genome assembly, contig: phage159-genome, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.967

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgcaa	Protospacer
***************************.**

50. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KF733017 (Enterococcus phage IME-EF4, complete genome) position: , mismatch: 1, identity: 0.967

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctttggtgcaa	Protospacer
***************************.**

51. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK268686 (Enterococcus phage vB_EfaH_EF1TV, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttacg	Protospacer
*****************************.

52. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_009904 (Enterococcus phage phiEF24C, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttacg	Protospacer
*****************************.

53. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP009390 (Enterococcus phage phiEF24C DNA, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttacg	Protospacer
*****************************.

54. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AB609718 (Enterococcus phage phiEF24C-P2 DNA, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaatgtcaatagttacg	Protospacer
*****************************.

55. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK693030 (Enterococcus phage vB_EfaM_Ef2.1, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaacgtcaatagttaca	Protospacer
****************.*************

56. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to CAJDJY010000002 (Enterococcus phage 156 genome assembly, contig: phage156-genome, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tctgctagcgtttcaatgtcaatagttaca	Protospacer
*** **************************

57. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN854830 (Enterococcus phage PBEF129, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaacgtcaatagttaca	Protospacer
****************.*************

58. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to LR031359 (Enterococcus phage 156, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tctgctagcgtttcaatgtcaatagttaca	Protospacer
*** **************************

59. spacer 1.7|421486|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KJ801817 (Enterococcus phage ECP3, complete genome) position: , mismatch: 1, identity: 0.967

tcttctagcgtttcaatgtcaatagttaca	CRISPR spacer
tcttctagcgtttcaacgtcaatagttaca	Protospacer
****************.*************

60. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to GQ478088 (Enterococcus phage phiFL4A, complete genome) position: , mismatch: 1, identity: 0.967

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccgctggcattgtagccaccaatct	Protospacer
**********.*******************

61. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP028722 (Enterococcus faecalis strain CVM N48037F plasmid pN48037F-2, complete sequence) position: , mismatch: 1, identity: 0.967

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgtgccgact	Protospacer
*********************** ******

62. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to CP002494 (Enterococcus faecalis 62 plasmid EF62pC, complete sequence) position: , mismatch: 1, identity: 0.967

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgtgccgact	Protospacer
*********************** ******

63. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP008814 (Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence) position: , mismatch: 1, identity: 0.967

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgaat	Protospacer
**************************** *

64. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP008814 (Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence) position: , mismatch: 1, identity: 0.967

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgtgccgact	Protospacer
*********************** ******

65. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP046110 (Enterococcus faecalis strain 133170041-3 plasmid pTEF2, complete sequence) position: , mismatch: 1, identity: 0.967

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgttccgaat	Protospacer
**************************** *

66. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_042127 (Enterococcus phage vB_EfaS_AL2, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

67. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MG264739 (UNVERIFIED: Enterococcus phage phiNASRA1, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctgaatcgttgtgaatttca	Protospacer
************** *************

68. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_031260 (Enterococcus phage Ec-ZZ2, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

69. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to KF733017 (Enterococcus phage IME-EF4, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

70. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK721199 (Enterococcus phage vB_EfaS_Ef5.1, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

71. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK721191 (Enterococcus phage vB_EfaS_Ef5.4, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

72. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

73. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to CAJDJX010000002 (Enterococcus phage Q69 genome assembly, contig: phageQ69-genome, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

74. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to KT932701 (Enterococcus phage vB_EfaS_IME196, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

75. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_042101 (Enterococcus phage PMBT2, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

76. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK721200 (Enterococcus phage vB_EfaS_Ef5.3, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

77. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MT520979 (Enterococcus phage vB_EfaS-271, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

78. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK982307 (Enterococcus phage MSF2, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

79. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to CAJDKF010000002 (Enterococcus phage vB_EfaS_159 genome assembly, contig: phage159-genome, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

80. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

81. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to JX193904 (Enterococcus phage EfaCPT1, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

82. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to KX284704 (Enterococcus phage SANTOR1, complete genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

83. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to KJ127304 (Enterococcus phage AUEF3, partial genome) position: , mismatch: 1, identity: 0.964

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtgaatttca	Protospacer
***********.****************

84. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721191 (Enterococcus phage vB_EfaS_Ef5.4, complete genome) position: , mismatch: 2, identity: 0.933

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaagcttgaatatgtttcgctttggtgtaa	Protospacer
***. *************************

85. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK721187 (Enterococcus phage vB_EfaS_Ef6.1, complete genome) position: , mismatch: 2, identity: 0.933

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
aaaagttgaatatgtttcgctctgatgtaa	Protospacer
*********************.**.*****

86. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP046110 (Enterococcus faecalis strain 133170041-3 plasmid pTEF2, complete sequence) position: , mismatch: 2, identity: 0.933

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacattctattcccattcgtgccgact	Protospacer
******.**************** ******

87. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP015885 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence) position: , mismatch: 2, identity: 0.933

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctattcccattcgtgccgatt	Protospacer
*********************** ****.*

88. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MH375074 (Enterococcus phage LY0323, complete genome) position: , mismatch: 2, identity: 0.929

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtaaatttca	Protospacer
***********.********.*******

89. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_042023 (Enterococcus phage phiSHEF5, complete genome) position: , mismatch: 2, identity: 0.929

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtaaatttca	Protospacer
***********.********.*******

90. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MH355583 (Enterococcus phage vB_EfaS_LM99, complete genome) position: , mismatch: 2, identity: 0.929

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtaaatttca	Protospacer
***********.********.*******

91. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to NC_042021 (Enterococcus phage phiSHEF2, complete genome) position: , mismatch: 2, identity: 0.929

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttctggatagttgtaaatttca	Protospacer
***********.********.*******

92. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK721187 (Enterococcus phage vB_EfaS_Ef6.1, complete genome) position: , mismatch: 2, identity: 0.929

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgataattttgaatagttgtgaatttca	Protospacer
*****.**.*******************

93. spacer 1.1|421089|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MK982307 (Enterococcus phage MSF2, complete genome) position: , mismatch: 3, identity: 0.9

aaaagttgaatatgtttcgctttggtgtaa	CRISPR spacer
gaaagttgaatatgtttcgctttgatgcaa	Protospacer
.***********************.**.**

94. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to GQ478082 (Enterococcus phage phiFL1B, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

95. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to GQ478087 (Enterococcus phage phiFL3B, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

96. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to GQ478083 (Enterococcus phage phiFL1C, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

97. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to GQ478085 (Enterococcus phage phiFL2B, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

98. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_013646 (Enterococcus phage phiFL1A, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

99. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_013648 (Enterococcus phage phiFL3A, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

100. spacer 1.9|421618|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_013643 (Enterococcus phage phiFL2A, complete genome) position: , mismatch: 3, identity: 0.9

aaataccgctagcattgtagccaccaatct	CRISPR spacer
aaataccactagcattgtagccgccaattt	Protospacer
*******.**************.*****.*

101. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP018066 (Enterococcus faecium strain E1 plasmid pE1_230, complete sequence) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

102. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

103. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

104. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP031028 (Enterococcus faecalis strain TY1 isolate flatfish plasmid pDEF-1, complete sequence) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

105. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP019514 (Enterococcus faecalis strain CLB21560 plasmid pB, complete sequence) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

106. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP036247 (Enterococcus faecalis R712 plasmid pR712_01, complete sequence) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

107. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP028838 (Enterococcus faecalis strain FC plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

108. spacer 1.11|421750|30|NZ_AP017623|CRISPRCasFinder,CRT matches to NZ_CP015885 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence) position: , mismatch: 3, identity: 0.9

ttaaacgttctattcccattcgttccgact	CRISPR spacer
ttaaacgttctctacccattcgttccgatt	Protospacer
*********** * **************.*

109. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MT119359 (Enterococcus phage heks, complete genome) position: , mismatch: 4, identity: 0.857

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttttgaattgttgtgaatacca	Protospacer
********.***** ********* .**

110. spacer 3.2|1700521|28|NZ_AP017623|PILER-CR matches to MK125140 (Enterococcus phage Nonaheksakonda, complete genome) position: , mismatch: 4, identity: 0.857

tgatagttctgaatagttgtgaatttca	CRISPR spacer
tgatagttttgaattgttgtgaatacca	Protospacer
********.***** ********* .**

111. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to CAJCJZ010000002 (Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence) position: , mismatch: 5, identity: 0.839

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaaaatggatatgcttttgcttgt	Protospacer
*************** ********.**. *.

112. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to LT615366 (Enterococcus phage VPE25 genome assembly, chromosome: VPE25) position: , mismatch: 5, identity: 0.839

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaaaatggatatgcttttgcttgt	Protospacer
*************** ********.**. *.

113. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to LT546029 (Enterococcus phage VFW genome assembly, chromosome: VFW) position: , mismatch: 5, identity: 0.839

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaaaatggatatgcttttgcttgt	Protospacer
*************** ********.**. *.

114. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to LT546030 (Enterococcus phage VPE25 genome assembly, chromosome: I) position: , mismatch: 5, identity: 0.839

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaaaatggatatgcttttgcttgt	Protospacer
*************** ********.**. *.

115. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 5, identity: 0.839

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaaaatggatatgcttttgcttgt	Protospacer
*************** ********.**. *.

116. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592544 (Vibrio phage 1.177.O._10N.286.45.E10, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

117. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592501 (Vibrio phage 1.127.O._10N.286.52.E12, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

118. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592595 (Vibrio phage 1.231.O._10N.261.49.F8, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

119. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592514 (Vibrio phage 1.143.O._10N.261.55.C8, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

120. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592664 (Vibrio phage 2.095.A._10N.286.46.E10, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

121. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592665 (Vibrio phage 2.095.B._10N.286.46.E10, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

122. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN693673 (Marine virus AFVG_250M950, complete genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaa-caaaaacaac	CRISPR spacer
cggcacaaaaggctgaagaagcaaaggcaa-	Protospacer
 .****************** ****..***

123. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG592494 (Vibrio phage 1.119.O._10N.261.51.A9, partial genome) position: , mismatch: 5, identity: 0.833

aagcacaaaaggctgaagaacaaaaacaac-	CRISPR spacer
aagcacaaacggctgaagaa-aaactcaagg	Protospacer
********* ********** ***  ***

124. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_007110 (Rickettsia felis URRWXCal2 plasmid pRF, complete sequence) position: , mismatch: 6, identity: 0.806

-gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
ttataa-tgaaaaaggttatgctttagccagt	Protospacer
  **.* ****** *********** *****.

125. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_019229 (Rickettsia felis plasmid pRF, complete sequence) position: , mismatch: 6, identity: 0.806

-gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
ttataa-tgaaaaaggttatgctttagccagt	Protospacer
  **.* ****** *********** *****.

126. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_006129 (Borreliella bavariensis PBi plasmid lp54, complete sequence) position: , mismatch: 6, identity: 0.8

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
taatagaaaacactgaagaacaaaaacaac	Protospacer
 *..* **** .******************

127. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010109 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-3, complete sequence) position: , mismatch: 6, identity: 0.8

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacaaaaaaaggctgaagagcaaaagcaat	Protospacer
**  * *************.*****.***.

128. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP014286 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S24-C155, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aaagaagaaaagctgaagaagaaaaacaac	Protospacer
**. * .***.********* *********

129. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to ACSJ01000012 (Clostridium phage D-1873 CLG.Contig163, whole genome shotgun sequence) position: , mismatch: 6, identity: 0.8

-aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
taggtac-taaggttgaagaacaaaaacaaa	Protospacer
 *.*.**  ****.****************

130. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_048182 (Edwardsiella virus pEt-SU, complete genome) position: , mismatch: 7, identity: 0.774

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
tcagattgaaaatggtcatgcgttcgccatt	Protospacer
   *************.**** ******* .

131. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029457 (Bacillus cereus strain FORC087 plasmid pFORC087.3, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacagaaaaaagccgaagaacaaaaacaag	Protospacer
**  . ****.**.***************

132. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029457 (Bacillus cereus strain FORC087 plasmid pFORC087.3, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacagaaaaaagccgaagaacaaaaacaag	Protospacer
**  . ****.**.***************

133. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN693317 (Marine virus AFVG_25M47, complete genome) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
tcacgcacaaggccgaagaacaaaaacaaa	Protospacer
  .*.** *****.***************

134. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
atgataaaaagactgaagaagaaaaacaag	Protospacer
* *   *****.******** ********

135. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
atgataaaaagactgaagaagaaaaacaag	Protospacer
* *   *****.******** ********

136. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015728 (Bacillus cereus strain A1 plasmid pBCA2, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacagaaaaaggctgaagagcaaaagcaag	Protospacer
**  . *************.*****.***

137. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015728 (Bacillus cereus strain A1 plasmid pBCA2, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacagaaaaaggccgaagaacaaaagcaag	Protospacer
**  . *******.***********.***

138. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN693190 (Marine virus AFVG_25M52, complete genome) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
gaataacaatggctgaagaacaaacacaac	Protospacer
.*..*  ** ************** *****

139. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN693247 (Marine virus AFVG_25M51, complete genome) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
gaataacaatggctgaagaacaaacacaac	Protospacer
.*..*  ** ************** *****

140. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_019772 (Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
gacaaaaacaggctgaagaagaaaaacaaa	Protospacer
.*  * ** *********** ********

141. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aagcacaaaaagctgaagaagaagctaaaa	Protospacer
**********.********* **.   **

142. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
atgataaaaagactgaagaagaaaaacaag	Protospacer
* *   *****.******** ********

143. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacagaaaaaggccgaagaacaaaagcaag	Protospacer
**  . *******.***********.***

144. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
aacagaaaaaggctgaagagcaaaagcaag	Protospacer
**  . *************.*****.***

145. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MT774382 (CrAssphage cr10_1, complete genome) position: , mismatch: 7, identity: 0.767

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
ttgaacaaaaggctgaagaacataacaaat	Protospacer
  * ****************** **  **.

146. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007650 (Lactobacillus salivarius strain JCM1046 plasmid pCTN1046, complete sequence) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
aatgagtgaaaatggttatgcttatcaaacc	Protospacer
.**** ***************** .   * *

147. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027401 (Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
aatgagtgaaaatggttatgcttatcaaacc	Protospacer
.**** ***************** .   * *

148. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
aatgagtgaaaatggttatgcttatcaaacc	Protospacer
.**** ***************** .   * *

149. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_006827 (Enterococcus faecalis plasmid pCF10, complete sequence) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
aatgagtgaaaatggttatgcttatcaaacc	Protospacer
.**** ***************** .   * *

150. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KY065497 (Streptococcus phage IPP61, complete genome) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
aatgagtgaaaatggttatgcttatcaaacc	Protospacer
.**** ***************** .   * *

151. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN693105 (Marine virus AFVG_25M79, complete genome) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgatagaagatggttatgcttgggcttat	Protospacer
****** ***.************  **. ..

152. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HQ634190 (Cyanophage Syn2 genomic sequence) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaagaaggttatgcttgggcatat	Protospacer
**********.* **********  **  ..

153. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MN693097 (Marine virus AFVG_25M78, complete genome) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgatagaagatggttatgcttgggcttat	Protospacer
****** ***.************  **. ..

154. spacer 1.2|421155|31|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_015286 (Synechococcus phage Syn19, complete genome) position: , mismatch: 8, identity: 0.742

gatgattgaaaatggttatgctttcgccagc	CRISPR spacer
gatgattgaagaaggttatgcttgggcatat	Protospacer
**********.* **********  **  ..

155. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040642 (Agrobacterium sp. T29 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gcgtacagccattcgtctggcat----cttcaat	CRISPR spacer
tggtacagccattcggctggcatgcggctg----	Protospacer
  ************* *******    **

156. spacer 1.5|421354|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP014358 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C94, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

aagcacaaaaggctgaagaacaaaaacaac	CRISPR spacer
acagccaaaaggctaaagatcaaaaacact	Protospacer
* .  *********.**** ******** .

157. spacer 1.6|421420|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022750 (Sphingobium hydrophobicum strain C1 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.733

ggcatctttcaacacagtgcgcttttcgat	CRISPR spacer
ctctatcttcaacccagtgcgctttgcgat	Protospacer
  *  ..****** *********** ****

158. spacer 1.6|421420|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009453 (Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ggcatctttcaacacagtgcgcttttcgat	CRISPR spacer
ctctatcttcaacccagtgcgctttgcgat	Protospacer
  *  ..****** *********** ****

159. spacer 1.10|421684|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938357 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141b, complete sequence) position: , mismatch: 8, identity: 0.733

gcaaagcctttggcaaacgctcgaagcact	CRISPR spacer
gcaaagccgttggcaaacgctccggcgtgt	Protospacer
******** ************* ..    *

160. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP012531 (Stx2-converting phage Stx2a_F422 proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

161. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG792102 (Escherichia phage P13803, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

162. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682385 (Escherichia phage PA33, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

163. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG803184 (Escherichia phage P13353 complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

164. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682382 (Escherichia phage PA29, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

165. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KU298437 (Escherichia phage phiON-2011, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

166. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682389 (Escherichia phage PA45, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

167. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG803185 (Escherichia phage P13357 complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

168. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682374 (Escherichia phage PA8, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

169. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HE664024 (Escherichia phage P13374 complete proviral genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

170. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682383 (Escherichia phage PA30, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

171. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG792104 (Escherichia phage P13771, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

172. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_000924 (Enterobacteria phage 933W, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

173. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG710528 (Escherichia phage GER2, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcttcttcagc	Protospacer
.. . ******* ******** ******..

174. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_049924 (Stx2-converting phage Stx2a_F451 proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

175. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG792105 (Escherichia phage P14437, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

176. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_004914 (Stx2 converting phage II DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

177. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG792103 (Escherichia phage P8983, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

178. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682381 (Escherichia phage PA28, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

179. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682375 (Escherichia phage PA11, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

180. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MG986485 (Escherichia phage SH2026Stx1, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

181. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682387 (Escherichia phage PA42, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

182. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AF125520 (Bacteriophage 933W, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

183. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KU238068 (Stx converting phage vB_EcoS_P32, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

184. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KU238070 (Stx converting phage vB_EcoS_ST2-8624, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

185. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682384 (Escherichia phage PA32, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

186. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682386 (Escherichia phage PA36, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

187. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP012533 (Stx2-converting phage Stx2a_F723 proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

188. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682376 (Escherichia phage PA12, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

189. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP000422 (Enterobacteria phage VT2-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

190. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to MT225101 (Escherichia phage Lys19259Vzw, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

191. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682391 (Escherichia phage PA51, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

192. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682388 (Escherichia phage PA44, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

193. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KU977419 (Stx1 converting phage AU5Stx1, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

194. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to JQ011318 (Escherichia phage TL-2011c, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

195. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP004402 (Stx2 converting phage I DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

196. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682372 (Escherichia phage PA4, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

197. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682377 (Escherichia phage PA16, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

198. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_000902 (Enterobacteria phage VT2-Sakai, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

199. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HM208303 (Stx2 converting phage vB_EcoP_24B, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

200. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP000363 (Enterobacteria phage VT2-Sakai proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

201. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KY914478 (Escherichia phage ArgO145, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

202. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG803182 (Escherichia phage P13363 complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

203. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682380 (Escherichia phage PA27, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

204. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP005153 (Stx1 converting phage DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

205. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP012534 (Stx2-converting phage Stx2a_F765 proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

206. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HQ424691 (Enterobacteria phage VT2phi_272, complete sequence) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

207. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682379 (Escherichia phage PA21, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

208. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682373 (Escherichia phage PA5, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

209. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_049923 (Stx2-converting phage Stx2a_WGPS9 proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

210. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_029120 (Shigella phage 75/02 Stx, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

211. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KU977420 (Stx1 converting phage AU6Stx1, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

212. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to HG803183 (Escherichia phage P13368 complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

213. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682371 (Escherichia phage PA2, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

214. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682378 (Escherichia phage PA18, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

215. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KU238069 (Stx converting phage vB_EcoS_P22, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

216. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_049925 (Stx converting phage vB_EcoS_P27, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

217. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_018846 (Escherichia phage P13374, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

218. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682390 (Escherichia phage PA50, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

219. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_010237 (Enterobacteria phage Min27, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

220. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_028685 (Shigella phage Ss-VASD, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

221. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to KP682392 (Escherichia phage PA52, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

222. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to AP012529 (Stx2-converting phage Stx2a_F403 proviral DNA, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

223. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044141 (Escherichia coli O157 strain AR-0430 plasmid pAR-0430-4) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

224. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_028660 (Escherichia phage phi191, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

225. spacer 1.4|421288|30|NZ_AP017623|PILER-CR,CRISPRCasFinder,CRT matches to NC_049917 (Escherichia phage Lys12581Vzw, complete genome) position: , mismatch: 9, identity: 0.7

gcgtacagccattcgtctggcatcttcaat	CRISPR spacer
attctcagccatacgtctggcctcttcagc	Protospacer
.. . ******* ******** ******..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

693940 : 701862

Planktothrix_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096397596.1\|693940_694999_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-17	30.5
WP_002361357.1\|694998_695955_+	ATP-binding cassette domain-containing protein	A0A1J0FA64	Only_Syngen_Nebraska_virus	4.2e-06	23.9
WP_096397597.1\|695995_697066_+	helix-turn-helix domain-containing protein	A0A288TXV8	Enterococcus_phage	1.7e-88	48.7
WP_002355797.1\|697466_697988_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.0e-14	33.3
WP_002355798.1\|698101_698302_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_002355799.1\|698362_698722_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_002393469.1\|698768_699149_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_002361363.1\|699216_699576_+	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_002368164.1\|699643_700138_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002361365.1\|700155_700671_+	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	7.7e-39	48.8
WP_096397598.1\|700686_701862_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	3.0e-86	48.0

DBSCAN-SWA_2

1059068 : 1076891

Enterococcus_phage(46.15%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002357859.1\|1059068_1061465_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.7e-19	24.1
WP_002360497.1\|1061489_1061840_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_096397697.1\|1061922_1062153_+	hypothetical protein	NA	NA	NA	NA
WP_002382232.1\|1062212_1062698_-	toxin	A0A097BY56	Enterococcus_phage	4.4e-60	70.5
WP_002357856.1\|1062732_1063215_-	helix-turn-helix transcriptional regulator	R9QTP6	Staphylococcus_phage	1.2e-20	48.6
WP_002382234.1\|1063612_1064368_+	DnaD domain protein	A0A0K0MX39	Streptococcus_phage	6.7e-31	56.0
WP_010712350.1\|1064386_1065229_+	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	1.4e-29	30.3
WP_172761423.1\|1065295_1065688_+	hypothetical protein	NA	NA	NA	NA
WP_002360491.1\|1065707_1066115_+	RinA family phage transcriptional activator	NA	NA	NA	NA
WP_002382237.1\|1066336_1066753_+	hypothetical protein	NA	NA	NA	NA
WP_002366557.1\|1066765_1067278_+\|tail	phage major tail protein, TP901-1 family	W6LP72	Streptococcus_phage	8.8e-35	49.4
WP_002357848.1\|1067312_1067672_+	hypothetical protein	A0A0F6N4J9	Staphylococcus_phage	7.6e-09	32.2
WP_002382238.1\|1067764_1068058_+	hypothetical protein	NA	NA	NA	NA
WP_096397699.1\|1068047_1070981_+	hypothetical protein	W8EBC4	Geobacillus_phage	6.9e-15	41.2
WP_010775782.1\|1070982_1071909_+\|tail	phage tail family protein	C9E2K5	Enterococcus_phage	6.9e-147	78.6
WP_096397700.1\|1071921_1073379_+\|tail	phage tail protein	C9E2K6	Enterococcus_phage	3.3e-175	47.8
WP_096397701.1\|1073411_1075247_+	hypothetical protein	A0A097BYA8	Enterococcus_phage	4.1e-143	71.7
WP_002357842.1\|1075252_1075648_+\|holin	phage holin family protein	F0PIJ6	Enterococcus_phage	2.8e-33	48.9
WP_172761419.1\|1075766_1076891_+	SH3 domain-containing protein	A0A139ZVY1	Enterococcus_phage	2.0e-76	44.3

DBSCAN-SWA_3

1514865 : 1523509

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096397803.1\|1514865_1515438_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.1e-25	35.1
WP_002357275.1\|1515434_1516466_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D8KMR0	Synechococcus_phage	2.2e-56	45.2
WP_002382407.1\|1516467_1517907_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.1e-49	33.0
WP_096397804.1\|1517882_1520102_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.5e-147	39.9
WP_033786281.1\|1520098_1520773_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_002357271.1\|1520773_1521025_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_002357270.1\|1521038_1521752_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3ELR0	Synechococcus_phage	4.3e-48	43.0
WP_096397805.1\|1521903_1523028_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_002384434.1\|1523020_1523509_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.8e-19	42.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP017623

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection