CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_AP017461	Candidatus Endomicrobium trichonymphae strain Rs-D17 plasmid pRSTT2, complete sequence	0 crisprs	NA	0	0	0
NZ_AP017460	Candidatus Endomicrobium trichonymphae strain Rs-D1 plasmid pRSTT1, complete sequence	0 crisprs	NA	0	0	0
NZ_AP017459	Candidatus Endomicrobium trichonymphae strain Rs-D17	3 crisprs	cas9,cas1,cas3,cas5,cas8c,cas7,cas4,cas2,DEDDh	1	24	2
NZ_AP017462	Candidatus Endomicrobium trichonymphae strain Rs-D17 plasmid pRSTT3, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP017459_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017459_1

42250-42351

Orphan

Consensus_repeat	Method
AAGGCACGTACTCCCTATTGCTACTACTACTACTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017459_1

>merge|NZ_AP017459|1|42250-42351|CRISPRCasFinder
AAGGCACGTACTCCCTATTGCTACTACTACTACTGCCTTTTATACCAAGATCTATCGCGTCATCAAAAGGCACGTACTCCCTATTGCTACTACTACTACTGC

>NZ_AP017459|1|1|42250-42351|CRISPRCasFinder
AAGGCACGTACTCCCTATTGCTACTACTACTACTGC	CTTTTATACCAAGATCTATCGCGTCATCAA
AAGGCACGTACTCCCTATTGCTACTACTACTACTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017459.1\|WP_015423029.1\|43941_44574_-\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|260003
NZ_AP017459.1\|WP_096525248.1\|42725_42965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525251.1\|46880_47135_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NZ_AP017459.1\|WP_015423033.1\|46614_46845_-\|KH-domain-containing-protein	unknown	unknown	gnl\|CDD\|179040
NZ_AP017459.1\|WP_096525241.1\|33068_33626_+\|SocA-family-protein	unknown	unknown	gnl\|CDD\|379096
NZ_AP017459.1\|WP_095558968.1\|31704_32976_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_AP017459.1\|WP_096525249.1\|45063_45462_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_AP017459.1\|WP_096525991.1\|27293_28199_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_AP017459.1\|WP_158302754.1\|41930_42068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525239.1\|28195_30922_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_AP017459.1\|WP_149029993.1\|48676_48859_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525242.1\|33631_34003_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_015423032.1\|46298_46610_-\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|234650
NZ_AP017459.1\|WP_096525252.1\|47466_48459_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|223268
NZ_AP017459.1\|WP_172412792.1\|37047_39354_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|372509
NZ_AP017459.1\|WP_096525250.1\|45607_46309_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_AP017459.1\|WP_096525236.1\|26201_26459_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525240.1\|30918_31518_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_AP017459.1\|WP_096525237.1\|26436_26649_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525992.1\|43609_43837_-\|YraN-family-protein	unknown	unknown	gnl\|CDD\|376717

Protein	Function_ID	Function_description	E-value
NZ_AP017459.1\|WP_015423029.1\|43941_44574_-\|ribonuclease-HII	gnl\|CDD\|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	2.04215e-116
NZ_AP017459.1\|WP_096525251.1\|46880_47135_-\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	3.85967e-29
NZ_AP017459.1\|WP_015423033.1\|46614_46845_-\|KH-domain-containing-protein	gnl\|CDD\|179040	PRK00468, PRK00468, KH domain-containing protein.	4.29493e-21
NZ_AP017459.1\|WP_096525241.1\|33068_33626_+\|SocA-family-protein	gnl\|CDD\|379096	pfam13274, DUF4065, Protein of unknown function (DUF4065). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and viruses. Proteins in this family are typically between 155 and 202 amino acids in length.	9.56779e-19
NZ_AP017459.1\|WP_095558968.1\|31704_32976_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_AP017459.1\|WP_096525249.1\|45063_45462_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	8.89392e-62
NZ_AP017459.1\|WP_096525991.1\|27293_28199_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	6.91898e-137
NZ_AP017459.1\|WP_096525239.1\|28195_30922_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_AP017459.1\|WP_015423032.1\|46298_46610_-\|PRC-barrel-domain-containing-protein	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.19527e-15
NZ_AP017459.1\|WP_096525252.1\|47466_48459_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	6.95473e-133
NZ_AP017459.1\|WP_172412792.1\|37047_39354_-\|AAA-family-ATPase	gnl\|CDD\|372509	pfam13166, AAA_13, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.	1.05271e-71
NZ_AP017459.1\|WP_096525250.1\|45607_46309_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	4.86545e-138
NZ_AP017459.1\|WP_096525240.1\|30918_31518_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	1.9009e-75
NZ_AP017459.1\|WP_096525992.1\|43609_43837_-\|YraN-family-protein	gnl\|CDD\|376717	pfam02021, UPF0102, Uncharacterized protein family UPF0102. The function of this family is unknown.	1.47785e-25

>NZ_AP017459.1|WP_158302754.1|41930_42068_-|hypothetical-protein
MKRFIMETAKESLMMLMLCSKSKSYRVAGGTNLDDCPVFEVKDKT
>NZ_AP017459.1|WP_172412792.1|37047_39354_-|AAA-family-ATPase
MKNFGSFRDFSKGTSLPEFKQANLFYGCNASGKTTLTRVFSCLNNGRFVTPELEGCELEISVNDKAINIKNFSDSHIKNKIRVFNSDFIEDNLQLKEGQAKKLYAVIGKENIDIKNDITKLEEERKALKNDKDELNVSVELSQVKKQLDNHYTTIASEIKGTLNLKQNDYKKNHFESDYKNYKSSSPSPDKITDDEKRQAVYIFTSPQKSKIDQPYIEILKNIEEVVLSTNDFNNSIELLKNPIKRKTAELKEKVIKWIEEGSCIHQEDHSKCLFCGQKISDFYWDTRANEIKEIIKKDDDLLKWEKEFEENKNKINAFSEKINSYPIYHKLKNTDFFTEELFKAYQTNIEATGKQFNDFKEYFQTLKQKIKEKSEHKDREIYFDNVDNFIDVINELKQAITNTIKSIEQNNEYVSKSNSLKSESRKKVIYYYIQTKYKDLTKLEADIKVKTENELQDTQKVKNIDKEIKDKKTLLSNLPQVIEKINVFLKNFLDTGLVLELENDSYFFKREINGQHKPAKNLSDGEKSLIAFLYFIASLESSTKNEKKNEIIVIDDPVSSFDSHNLFNIQELLTSSVIDYGQIFFLTHNFYFFAKIREALKAKFKSQIKNNAEPQTPVEIFEIENRKDSGSMLKPANKYIKTHISEYMSLIEKLNGIYNRKDDEKDLSTGNLIRRVLEVFLSFKVPNKRNLYINFQSIAGNDNKYPGLLNMANAFSHTTEISSVTDANDFSYTAGRQEIRELFEFMKDNDEKHFNGLGIKLQDKAAN
>NZ_AP017459.1|WP_096525242.1|33631_34003_+|hypothetical-protein
MGFKGITFWCDDESEKNHLRFVISDPDVYGNVLTVNMTTLYNRERADISCVLDCGDHPGIKHESFVAYQKALGVSVEKIMTKILRHCYKNTAKLTDEILRKIQEGAKKSNFLPQKLKKYFEYF
>NZ_AP017459.1|WP_096525241.1|33068_33626_+|SocA-family-protein
MNLEKTIQIVNYVLQKYDFSLNYTKLLKLLYIADRECLDRWNFTISEDNYAAMKQGMVLSGLYDFIRGNADKLSQLKWDSYFYRDNYDLRSKHIENCSYDELSEAEKEILDEVDKKYHFKPWDYLVNEVVHKFPEWKEVEDKIRNSSLKIEKEKILSVLDRDEREIKEIISSENAYEKCKNDLKG
>NZ_AP017459.1|WP_095558968.1|31704_32976_+|transcription-termination-factor-Rho
MDVSVLSKRTMAELIEIAKSFKVDSVAGLRKQELIAKIFEAQTKENKSVYDEGVLEILPDGFGFLRSPDYNYLPGPDDIYISPSQIKKFALRKGDTVAGYVRPPQSQQERYFALLQVRSINGQENLENIRDRDLFDNLTPLYPDEKMVLETKKEEISMRIIDMLVPIGKGQRVLINAAPRTGKTVLLQKIANAVTKNNPDIVLMVLLIDERPEEVTDMQRSVKGEVISSTFDEPSDRHIQVAEMVIEKAKRIVENGKHVVVLLDSITRLARAYNTAMPSSGRILSGGLDSNALQRPKRFFGAARNIEEGGSLTIIGTALVETGSRMDDVIFEEFKGTGNCEIYLDRKLADRRIFPSIDLLRSGTRKEELLLSEDEKNKMWILRKWMNSMNSIEVMEELSKRLLNSKSNKDFLKQMELSSMERL
>NZ_AP017459.1|WP_096525240.1|30918_31518_+|dephospho-CoA-kinase
MIIGLTGGIAAGKSESAKYFESLGACAIDADAIAHELTAKGMPALDELSKSFGGSILLSSGDLNRKKLADIIFSDEKAKLRIEKIIHSHIISRINEIISQNIMRSNIVIDAPLLFEVGLDRICDKSAVVRVSYNIQVERLVLRDKLNADQAKRRISSQMPMEKKVELADFVIDNSGSKENLKKRVKDLYKLLTSEVKII
>NZ_AP017459.1|WP_096525239.1|28195_30922_+|DNA-polymerase-I
MKKFFIIDGNAYIHRAYHALPPLSTSNNRQVNAVYGFVKLLLKIKNSFKPDYMAVCFDYPSKNFRHEIFKDYKANRKPLDKALISQMPIAREAVKALNVVGIEIKGYEADDLIATVTGNNKGSGVQTVIVTGDKDILQLAEDETVLIWNYSKDIMYDTKKVEEKYGVAPKQLSDIFALMGDASDNIPGIKGIGEKTAVKLIEKFGNLENVLQNADSVKGNMGKLLSHGKEQALLSRKLIELNRRVPLDYKLGEFESKDIDAGKAVSFFEKYEFKSLLAKYSVKEHELQFPVILNETHRNEEAGSGSFVTDKPVFEVVNSQERAAEVAEKIEQAGIFALKTVRSTLDSLKTRIVGISLCVENKAFYFPIGHNDLTARQVIFEDFKDIFAPLFFSDKIKKIGHDLKQERNIYSMSGVGLNNIYFDIMLASYCLNPAKSHCITDISKEYLDFTAGVGSYAWKGAKKSSFANSSIEAGAKYANSISAAVFAIYKIFDFQIKEKKLSLLFFDTEMSLVEILSEMEISGIKVDLPFLRNFNEKIVYELKIIENNIYKIAGIEFNINSQKQLSSVMFEKLNLPVIKKTKTGYSTDEEVLVELSSHEFPAEILKYRELQKLKSTYIDPLTDYCVYYGSRIHTIFNQAVTTTGRLSSTEPNLQNIPVKSAYGKEFRKAFVPERNKIFISADYSQIDLRVLAHISQDTKFIEAFKAGTDIHSATAREIFNIPEGYPLTDSLRSAAKSINFGIIYGMSPFGLSKQLNIPFGKAKEYIDGYFERYDKVKFWMEQIVKQASEDGYVRTITGRIRYIPELRSTNAQVRKAGERMALNTPVQGSSADIIKIAMISVYNEIKLKGYKSLMLLQVHDDLLFEVPDGESENMISIIKNKMENPLHLSIPIVVDIKAGRNWGEMKKI
>NZ_AP017459.1|WP_096525991.1|27293_28199_+|thioredoxin-disulfide-reductase
MYDVIIIGGGPAGLSAAIYASRARLKTLIIEKTGCGGQMTTTDLLENYPGFNGGINGFELAVKLEKQARDFGAEIIYDEVGAIEQGLSKKVITTNSAYETKTVIIAAGTYAKKMNIPGESEFMGRGVSFCAVCDAPFYRDKNVLVVGGGDSAIEEAAYISKFAKNVTVVHRRDKLRAAKILQERMKLHPNISVIYDSVPKEIFGSDSVEKVTITNVKTNESKDLIIDGIFVFTGLIPNTLFLSGVALDKTGYIITDEDMNTSSTGIFACGDIRKKQLRQVVTAASDGAQAAVSAQRCIENL
>NZ_AP017459.1|WP_096525237.1|26436_26649_+|hypothetical-protein
MNTYPKFKVFTSDDPSKLDREESLILKESTYFPKDKTAKIIALKSLKSRILRIYLLQIIYPVMNAKNIIF
>NZ_AP017459.1|WP_096525236.1|26201_26459_+|hypothetical-protein
MTPVLPIVYKEQDIDKYYNPQFIKENFVKEFVNDLLFQLFKISDFRLVDIAHSDRVWKKYFDKQEKHHKTEMLLEEIIDEYVSKI
>NZ_AP017459.1|WP_096525248.1|42725_42965_-|hypothetical-protein
MKKVVSLMLLALTFSACSQPQTALNKKIFRSMEVAYEKIEEQFKVASPNWSIITEYLDYLSTAATLKNKINSGSKQKKQ
>NZ_AP017459.1|WP_096525992.1|43609_43837_-|YraN-family-protein
MILTTNFRTNFGEIDIIAKHNDTIVFIEAKYRKSSYSGTPQEAVTAKKQQKIINSALSCLKIYIIYKNFYIFVIM
>NZ_AP017459.1|WP_015423029.1|43941_44574_-|ribonuclease-HII
MFSNIFSFDRNFYNKGFYPVAGIDEAGRGPLAGPVVAAVVILPKDSAIPYLNDSKQLSEKKREILFEIIKETALDYAVELVNNEIIDEINILQATFLAMSRAVLKLKTQPDLYLIDGNRKVHGLSFNQETIVGGDAKSACIAAASILAKVSRDKMMLEYAKQYPVYEFEKHKGYGTKKHIEALKKHGICPIHRLTFSPVNDIISQTKLNI
>NZ_AP017459.1|WP_096525249.1|45063_45462_-|50S-ribosomal-protein-L19
MSLSLLAQVQIAQKRDLGVSFKSGDQIKVHFKIVEGGNERIQIFEGIVIRIKGSGLSKTFTVRKISFGIGVERIFPIHSPRIDKIEVVRRGKVRRAKLYYLRNLSGKAARISEYSSRRNLKKETVNQVPAAN
>NZ_AP017459.1|WP_096525250.1|45607_46309_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDILTIFPGMFKGPLTESLIGKAIEKEILKINIIDIRSFSKDKHKKVDDKSFGGGCGMVMKLEPLYDAIKSTGVKKKNSTYKNPYTKPYVIYMSPQGRILSDSIVKNLAKFKQLVIICGHYEGVDERTMNYVDEEISIGDYILTGGEIPAMVLIDSTARMLTGVVKEKSSVKNDSFYNNLLDYPHYTRPAVFKGYKIPEVLLSGDHKKISEWRVEESYKRTKERRPDLLKK
>NZ_AP017459.1|WP_015423032.1|46298_46610_-|PRC-barrel-domain-containing-protein
MDSKKRDLKWKVSDILGFEVFNQNGKRLGILSDIILTGSNDVWVVKYYNEEVLIPALKNIVKEVNVIRKKIFVILPKEYEYIYSQVKLADDVLEYNGYFVYED
>NZ_AP017459.1|WP_015423033.1|46614_46845_-|KH-domain-containing-protein
MKDLVLFIAKALVDNPDQVEVREVTGEKATVLELKVAEGDRGKIIGKEGRIIKAIRVIINSASAKLDKRATVEVVE
>NZ_AP017459.1|WP_096525251.1|46880_47135_-|30S-ribosomal-protein-S16
MAVRLRLQRRGKPKRPYYRVVAIDQRAKRDGEPIEILGQYDPIAEDNKFKVNIERINYWLGVGAKASETVAALIKKNRTVEIKQ
>NZ_AP017459.1|WP_096525252.1|47466_48459_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MSLALLFHILVYIILTQWRKDIFAENTPIYIEVKVKLIDGKKISSDKRAEIKEEVAKIKQQTEKIPGLATVLVGGDPASRVYIKSKIKACEDAGIKSFHHNLDANSSKEEIIALIKKLNENSEIDGILLQLPLPQNKDAQECLNAVSPLKDVDGLHPFNAGLLNLSKSWNEIIEKNILVSCTPLGVLHILHKSGIIIEGKTAVVIGRSNLVGKPLSMLLLANNATVVMAHSKTRNLKEICKSADIVVAAVGKSKFVNKDFIKTGAVVIDVGINRTAEGLCGDVDFDAVKDMDIKITPVPGGVGPMTITMLLENTLKAFNNRKRYLSNRMP
>NZ_AP017459.1|WP_149029993.1|48676_48859_+|hypothetical-protein
MAFKVSRIKIFRSMMFGEIGFKKIESAFIMFGIYFITRLLQNILGPHPLPLIINCIRQFF

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Crispr_ID: NZ_AP017459_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017459_2

90446-90537

orTypeII

Consensus_repeat	Method
TTTAACGATGGCAACCATTGACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017459_2

>merge|NZ_AP017459|2|90446-90537|CRISPRCasFinder
TTTAACGATGGCAACCATTGACTAAAAAGTAGTGAGCGAAGCGAACGACTCTTTAATTGAATATTTCCTGTTAACGATGGCAACCATTGACT

>NZ_AP017459|2|2|90446-90537|CRISPRCasFinder
TTTAACGATGGCAACCATTGACT	AAAAAGTAGTGAGCGAAGCGAACGACTCTTTAATTGAATATTTCCT
GTTAACGATGGCAACCATTGACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017459.1\|WP_095558650.1\|82669_82855_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_015423060.1\|92399_92624_+\|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl\|CDD\|376620
NZ_AP017459.1\|WP_015423062.1\|94620_94989_+\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|379152
NZ_AP017459.1\|WP_015423058.1\|91832_91967_+\|50S-ribosomal-protein-L34	unknown	unknown	gnl\|CDD\|366117
NZ_AP017459.1\|WP_096525287.1\|98405_99821_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350795
NZ_AP017459.1\|WP_095558651.1\|94259_94493_+\|Jag-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379695
NZ_AP017459.1\|WP_096525278.1\|82222_82489_+\|DUF4065-domain-containing-protein	unknown	unknown	gnl\|CDD\|379096
NZ_AP017459.1\|WP_096525283.1\|91976_92396_+\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|376392
NZ_AP017459.1\|WP_096525281.1\|89162_90068_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_AP017459.1\|WP_186330525.1\|81884_82190_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525274.1\|76524_79530_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_AP017459.1\|WP_096525275.1\|80018_80219_+\|caspase-family-protein	unknown	unknown	gnl\|CDD\|334197
NZ_AP017459.1\|WP_096525277.1\|80650_80959_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525273.1\|75880_76525_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341131
NZ_AP017459.1\|WP_015423065.1\|97341_98202_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_AP017459.1\|WP_096525286.1\|96539_97304_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_AP017459.1\|WP_096525279.1\|83187_85821_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_AP017459.1\|WP_096525285.1\|95252_95870_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223710
NZ_AP017459.1\|WP_096525280.1\|87054_89007_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182528
NZ_AP017459.1\|WP_096525284.1\|92643_94203_+\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|234942

Protein	Function_ID	Function_description	E-value
NZ_AP017459.1\|WP_015423060.1\|92399_92624_+\|membrane-protein-insertion-efficiency-factor-YidD	gnl\|CDD\|376620	pfam01809, Haemolytic, Haemolytic domain. This domain has haemolytic activity. It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.	2.83745e-30
NZ_AP017459.1\|WP_015423062.1\|94620_94989_+\|CoA-binding-protein	gnl\|CDD\|379152	pfam13380, CoA_binding_2, CoA binding domain. This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.	2.78954e-31
NZ_AP017459.1\|WP_015423058.1\|91832_91967_+\|50S-ribosomal-protein-L34	gnl\|CDD\|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	8.74112e-07
NZ_AP017459.1\|WP_096525287.1\|98405_99821_+\|AAA-family-ATPase	gnl\|CDD\|350795	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1. Pif1 and other members of this family are RecD-like helicases involved in maintaining genome stability through unwinding double-stranded DNAs (dsDNAs), DNA/RNA hybrids, and G quadruplex (G4) structures. The members of Pif1 helicase subfamily studied so far all appear to contribute to telomere maintenance. Pif1 is a member of the DEAD-like helicases superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.15962e-49
NZ_AP017459.1\|WP_095558651.1\|94259_94493_+\|Jag-N-terminal-domain-containing-protein	gnl\|CDD\|379695	pfam14804, Jag_N, Jag N-terminus. This domain is found at the N-terminus of proteins containing pfam13083 and pfam01424, including the jag proteins.	3.80004e-14
NZ_AP017459.1\|WP_096525278.1\|82222_82489_+\|DUF4065-domain-containing-protein	gnl\|CDD\|379096	pfam13274, DUF4065, Protein of unknown function (DUF4065). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and viruses. Proteins in this family are typically between 155 and 202 amino acids in length.	0.000618819
NZ_AP017459.1\|WP_096525283.1\|91976_92396_+\|ribonuclease-P-protein-component	gnl\|CDD\|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	8.82012e-24
NZ_AP017459.1\|WP_096525281.1\|89162_90068_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.94648e-17
NZ_AP017459.1\|WP_015423065.1\|97341_98202_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	3.93003e-61
NZ_AP017459.1\|WP_096525274.1\|76524_79530_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	2.85022e-89
NZ_AP017459.1\|WP_096525275.1\|80018_80219_+\|caspase-family-protein	gnl\|CDD\|334197	pfam00656, Peptidase_C14, Caspase domain.	0.00021178
NZ_AP017459.1\|WP_096525273.1\|75880_76525_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341131	cd16961, RMtype1_S_TRD-CR_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR) and similar domains. The restriction-modification (RM) system S subunit generally consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This superfamily represents a single TRD-CR unit; in addition to type I TRD-CR units, it includes RMtype1_S_TRD-CR_like domains of various putative Helicobacter type II restriction enzymes and methyltransferases, such as Hci611ORFHP and HfeORF12890P, as well as TRD-CR-like sequence-recognition domains of the M subunit of putative type I DNA methyltransferase such as M2.CinURNWORF2828P and M.Mae7806ORF3969P.	1.46658e-23
NZ_AP017459.1\|WP_096525286.1\|96539_97304_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	2.80306e-81
NZ_AP017459.1\|WP_096525279.1\|83187_85821_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_AP017459.1\|WP_096525285.1\|95252_95870_+\|HAD-family-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.8244e-43
NZ_AP017459.1\|WP_096525280.1\|87054_89007_-\|ABC-transporter-permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	1.34774e-148
NZ_AP017459.1\|WP_096525284.1\|92643_94203_+\|membrane-protein-insertase-YidC	gnl\|CDD\|234942	PRK01318, PRK01318, membrane protein insertase; Provisional.	4.43752e-114

>NZ_AP017459.1|WP_096525281.1|89162_90068_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKFILITILLAVVATAVFLIFKFKPSKQVIDKETTLTPRNLYLELRENGVVNPRNRLEVKSSFNGRIEKILVNEGDKIKKGQIIILMSSSERASMVDAARTISEQEYEKYQNIYKPTPIIAYMDGFIILRQKEPGHDVSSNEVILAMADDLIVKAYIDETDLRYIKKGIRTKMYLDAYPDENFEGIVEHISYESKLLNNVNVYEIRIKPLKKPKAFKSGMTVTVMIIAEFKKNAPAIANTFISEIGDTKTVTVKTGNINKPTLEKREIKTGISDGIFTEILSGLNQDETVVTFKPVKEKN
>NZ_AP017459.1|WP_096525280.1|87054_89007_-|ABC-transporter-permease
MKAIEIKNLKKTYHLEKLDVPVLHGINLEIMQGEFVAIMGQSGSGKSTLLNILGLLDKPSEGSYKLAGIETLNYSNNELAALRNRYLGFIFQQFNLLPKLTLSENVSLPAIYTDSKDKEEFEDSLKLLDMVGLSERIKHRPSEVSGGQQQRAAIARSLINKPLIIFADEPTGNLDTKSAKEIIKILKDLNNTGITIVMVTHEAELADCATKIVKIQDGLIISDKKISEKSSSNPVFQKKTFKHNTFSLVKKFRDYFKEALRSLLGNKMRSILSVLGITMGVASLIAMFAIVNGAKRNITKYIENLGKPDILMVIPSLSQNDKYLKLNINDIDDLKRNVSGVRTVSGGCGREQLTIVANGKNCDTTLIGVSADYADLKNYYISDGRFFTEEENREKKKVAVLGKTVIKKLYGDENFNPTGKYVKINKTDFQVIGVLPSKSSNEWRDEDDKVIIPLNTALYRMFGIKELGFMDVQVKEDADMSEVSESIIKRLLFIHRLPADEKDAVRVINMEEIKKTLSSVTRTFTYLFGSIAFISLLIGGIGIMNIMFVSVSERTKEIGLRKAIGANNADILFQFIIESVFVCCVGGIIGILFGSGLSVIMGKFAGWTIYITPFSIGFAFCFSGLIGLIFGVWPARKASILNPIDALRHD
>NZ_AP017459.1|WP_096525279.1|83187_85821_-|alanine--tRNA-ligase
MDKLSSKIRAEFLGFFKNSGCAVVPSDSLIPAGDKTLLFTSSGMVQFKQHFLGQSKDSFTRAASCQKCFRTSDIDQVGTTARHLTFFEMLGNFSFGDYFKKEAAAWAWEFLTKNMSLPKDKLYITIYKDDDEVAGIWKNIAPANKIIKMDEKTNFWNMGETGPCGPCSEILIDLGQETGCGSPACCPECNCDRYLEIWNLVFTQFDRQPDGSLKNLPRKNIDTGMGLERLSATVNGRKNVFDTDLFMPVMENAAEILKIKNEGSNISKLRMIADHSRAVTFLISDGILPSNEGRGYVLRRILRRALRQGKFYGYNKPYINELVSDVLKIMEAAYPELSSKLSNIRSIVKTEEEKFLETLESGSEILSSIINSYKSKDINIISGKDVFKLYDTYGFPHDLTKEMAFENGLEIDEDKFKFEQKKAQEKSRVAWCGSGERDITFYSILRKKTGDTVFTGYDNYASESRVLALIKDGSEISELKTGDNGEIILSHSSFYAQSGGQSDDKGKIANNSFESIVEYIFKPAGNLFVHKVKVLKGLIKINDAVSTIIDIERRKQIARHHTAAHLLHKALREAFGGHITQAGSLVARDYFRFDFTHFSALKKDDLIKIEKRVNSIIRLNSEVRIETMAIAKARNAGAMALFGEKYGDEVRTVLIKNESGDGNYSMELCGGTHVSRTGDIGIFKIISESSAAAGVRRIEAVAGIAAENYILDEEAVIIKTSKILNASKEELVNKAHKYISDYKKLENEFKSLKSSLISGEIDSYAKEVKKINGINFLSVIADKADIKALRTISDQLKEKLKSAVLLIVSKNEDRASFILSATADCVQKGINAGKIAKAFAASINGSAGGKPDFAQGGSKDLSNLNDAVKNAHKYILL
>NZ_AP017459.1|WP_095558650.1|82669_82855_+|hypothetical-protein
MKVRKMACKFLKGKGGRSGLRVIYVFEQKEKKVTFIEMYYKSEQENENKKRLSAFIEKNFG
>NZ_AP017459.1|WP_096525278.1|82222_82489_+|DUF4065-domain-containing-protein
MYDLKSGYYYEQIKYLPKRPADLSGLSERERRHIDVTLDKYSNKSAKALSDLSHEDIPWISAKDGEVIDYESVFYRTDATSVRSYEAD
>NZ_AP017459.1|WP_186330525.1|81884_82190_-|hypothetical-protein
MATLTEPVSEIYYCSKHGKICKPVFSIMKWWKTYSKDTIKRIKEFEKLKTGTLHYCLSGDARTIDIISALSKKQKSFADILQAKNFRNILKSALCRSYRLP
>NZ_AP017459.1|WP_096525277.1|80650_80959_+|hypothetical-protein
MTSSCVIRKAKPKIDVNILRKITELFKLPAEDLKLSPEYESENPKRDDKKVKDFEILKKFCNIGLVEPVEADDMYFVAMENKFCRLTALGKYYWRLVSEGEI
>NZ_AP017459.1|WP_096525275.1|80018_80219_+|caspase-family-protein
MNKALLVGLTNYQNNTLDGTITDVNCLEKILSRHYDDTKNFDCDKIIKVSTRKELRKKLIEFFFKT
>NZ_AP017459.1|WP_096525274.1|76524_79530_+|type-I-restriction-endonuclease-subunit-R
MPIKTKEITFENEIENILLKNGYIKGNPADYDKKYALDTALLFKFLQNSQSKEWGKLVNKYGDGAEKSFLRRLGRELESKGMLYLLRNGIIDTPAKFELCFFEPASNMNETDIEHYKKNILSITRQVHYSLKSENSIDIVIFINGLPVSTIELKNPVAGQTVGNAKKQYKYDRDPRELLLSFKTRCLVHFAVDTDEIYMTTKLCGADTYFLPFNKGDGHGKGNPLNSRGYRTSYLWEDVLQKDSLLDIIRRFIHLEVKDKKENIIFPRYHQLDAVRKLIADVKANGSGKNYLIQHSAGSGKSNSIAWLAHHLQNLHDTDDKIIFNSVVVVTDRKVLDRELQDTIYQFEHIDGVVAKIDVNSKQLAEALKTGRKIIITTLQKFPFVLEEVKDLRGLKGKRFAVIIDEAHSSQTGGGSSSKLKAVLGDDTAGLSECEKLQKTADEEAKEEKNIPDSEDIIRKEMKTHGRLKNLSFFAFTATPKPATIEMFGNKGDDGKPKAFHLYSMRQAVEEGFILDVLKNYMTYTTYFRLGKAIANDPRYDKSRANKALGKFLSLHPHNLAQKTQIMVEHFRSVTKNKICGKAKAMVVTSSRLHAVRYYFEFKKYIKKMGYQKELRVLVAFSGTVSDEGKESTEQKLNNIKETELKEKFKGTDYQILLVAEKYQTGYDEPLLHTMFIDKKLGGVKAVQTLSRLNRICPGKEDTFILDFVNSAEDIKKSFKPYYKAADIEETTDANIVYDIKSKLDEFRIYWDTEIENFANVFFKPSKKQENLDFSILNSYIDPAVDRYEGKNEEEQEEFKSNLTKFVRAYSFISNIIKLDDVKMHKFFAYSKYLLRKLPKDKRDEVNLNDEITLQYYRVQKIFEGSIILEEENNPLKNYKYVSKVDTKYETASLSELIEKLNERFGTDFTVMDKVLQQFIADMEKDENLRKQAMNNSKEHFKFPFNDAFMTIVVDRMVQNKEFCERILDDEKFGKTVKELLSGYMYDRLRKTDSVKIELDN
>NZ_AP017459.1|WP_096525273.1|75880_76525_+|restriction-endonuclease-subunit-S
MELYSKYKPSGIEWIGDIPVDWEIKKLKYIAELDKENLAEKTDPDYKFEYIDIGSVSNGRIDKTTEMIFKESPSSARMVVKKGDIIVSTVRTYLRAIAYIEKHDKYICSTGFCVLTPKDIDSKYLYFYCMSEFFVQEISRNSVGVTYPAISSYAVGRVYILIPPLEKQKEIANLLDDKTEKIDNLIENITKQIKKLQEYRKSIIGEAVTGKAAI
>NZ_AP017459.1|WP_015423058.1|91832_91967_+|50S-ribosomal-protein-L34
MKRTFQPNRARRKKKIGFRARMDTSGGRRILSARRRKGRKTISA
>NZ_AP017459.1|WP_096525283.1|91976_92396_+|ribonuclease-P-protein-component
MRAENKKNLSGSLFPENSAGKKFSFTYFERLHIQKDFDKIFKNGLRLENKNIKILVYKRNDGHIIRRLGLITTKRVGAAVIRNRTKRRLREIFRTNKHFLESGLDLIFISKPGTALLDYDSLKKIILDLLKSAELYNPE
>NZ_AP017459.1|WP_015423060.1|92399_92624_+|membrane-protein-insertion-efficiency-factor-YidD
MKQIALFLIKCYKFISQFLPSICRFQPSCSTYAYQAIETYGFFKGSLLTFKRIIRCRPFCAGGFDPVPLPKKKI
>NZ_AP017459.1|WP_096525284.1|92643_94203_+|membrane-protein-insertase-YidC
MQKNSILFVTLSAFTVFIWYFFFAQPSEQSYRQMMQLQNTAAVSESGVNKFKNADLNEFQIDDIYAKEEHINIETEQYKAVLTNKGGGVLSWSVKEKNGQWVDLVFPESAPVMANFPNLTYKVVSKSAEKIVFEYASKEGWKITKIYNLSDLYMHNLNISVEKNAKTPFPQIDLKWGPGLGTDSKELKENISLTRALVYTAVKPNKLKKLKDNFEPASLCKWTAVDNRYFLVAFIPKNSMDFDKILFSRLEKKHPCSVILKAAEPKDVDKKDYSVNFYLGPKDYKYLKTYDLGLEKTVDFGFFGFLGKIAFSILVFFYKLTHNYGWAIIMLTTIIQILVLPLTLKSFKSSAAMKRVQPVIKDIQMKYKDNPQRLKAEMLNIYQSQKVNPLGGCLPMLLQLPIFWAFFTMLRNAYELRNEGWILWVKDLSAADQFMQFGSFNLNLLPLMMGIGMFFQQRMTTVTSDPTQRKIMYIMPVIFTFMFWSFPSGLVLYWLTNSLISMIEQYFIMKKDAITVKHI
>NZ_AP017459.1|WP_095558651.1|94259_94493_+|Jag-N-terminal-domain-containing-protein
MSEIEFKGKNVMEAITNGLTQLGCNKEDVKIKIVSEGSTGLFGLMGAKPAVVLISVDDSKCGNKTFFSSDYKKSAKK
>NZ_AP017459.1|WP_015423062.1|94620_94989_+|CoA-binding-protein
MDRNKLIAIVGVSENPDKTGFKIFTDLLRAGFKVAAVGIRGGAIAGKRVYKSLKDLPAKPDMILTVVPPAGTDKTVDDAIDLGIKEIWMQPGSQSETAVQRAKAVGMKVTESGCFMLVHGIW
>NZ_AP017459.1|WP_096525285.1|95252_95870_+|HAD-family-phosphatase
MDGVIADSMPYHFISWFEVLKQHNVRINPMIIFEMEGAKWDKVIKLAFKQSGIPLFQQLTQKIRKKREQIFNQYFKRYIFTGIPEFIKSLKNKGVLVGLVTGSSLKEAQKMLPEYIYKLFDTIIAGDGVKRGKPYPDPYLAAAKNLKVLSKECMVIENAPYGIKSAKAAKMYCCAIATSLSGDLLSEADIIFDTHRDLYEYFEGD
>NZ_AP017459.1|WP_096525286.1|96539_97304_+|ParA-family-protein
MSKVIAIANQKGGVGKTTTAINFTASLAYMGHESLLIDMDPQSNTTSGFGINKNNLEKNIYNVLINEVALEDILQDTIMDRLDIVPATTSLSGAEVDLVNMSDREKRLKLALEKFHKIYKYIIIDCPPSLGLLTINSLVAADTVLIPMQCEFFSLEGLGQLSETISALMQSYDLELEGVLFTMFDSRTNLADQVVEEVKKFFKEKVYETKIPRTIKLAEAPSFGKPVLLYDPSGKGSQAYIDFAKEFLLKQNME
>NZ_AP017459.1|WP_015423065.1|97341_98202_+|ParB/RepB/Spo0J-family-partition-protein
MQKKALGRGLESLIPALAANKASTDEIIIIIPLDKIKSNRFQPRNKFDEVKLQELARSIEKHGLAQPILVAASIVPGEYEIIAGERRYRASKLAGNKDIKAIVKQSADDKQRFDLALVENIQRENLDPIEEARAFKRLIEEFGHTHEQISDIVGKERSVISNALRLLSLPEDVQLLITEDKISPGHGKILAGIEDKNRIRAIVDRILNENLSVRAVEKIISELKPEKESDGQKKQEIELINLKEEIQRKLGTKVNISGTGKKGRIEIYYYSLEDLERITKELKFSC
>NZ_AP017459.1|WP_096525287.1|98405_99821_+|AAA-family-ATPase
MKKLNLDYSLLSKKTNIKNMGAEALKKVADATAAMPNTTPQEAVNMKSNIDIEINDEFKQAYDLIDKSDNCVFITGSAGSGKTTFLRYYTMRASKKTVILAPTGVAALNCGGETVHSFFYFKPDITVSKIKKKKLSEKSIYKKVETIIIDEASMLRCDILDCIDKFLRLNREKRQEPFGGVQMVFIGDLKQLPPVVKREEYHIFNSVYKSPYFLSAYSLNKCILHTVELKKIYRQRDSNFVALLNAVRDGTANDDEIAELNKKVSSQIFNRPMTVYLTTTNKKAAFINHKYLSEIEYKQVVFTAETKNIEENSKVFPAEYELVIKKNAQVMMLNNDAKNRWVNGSIGIVENIKSGGDFGKLSICIRFPNGRVENVEPYKWELFKYGWNEEKKQIETYRAGFFKQYPLRLSWAITIHKSQGKTFDNVIIDMEYGAFAPGQLYVALSRCTSFDGITLSRPLTKRDILAPAVWD

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Crispr_ID: NZ_AP017459_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017459_3

327357-335841

TypeI

I-C

Consensus_repeat	Method
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	PILER-CR
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CRISPRCasFinder
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CRT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	PILER-CR

128 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_AP017459_3

>merge|NZ_AP017459|3|327357-335841|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTATGTTGTGAGCGTTCCGCCGTTCACTGCATGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTTTGGGATCGGCCTGATTGCGGTACAGTGGTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTACTGAAGCCCAAAACTTCGAGCAGAAAATGCAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGAAATAGGTTATCGTACAAATAATGAGCAAATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGAAGTATGCTAGTCTTGGTAGTTCAATGTTCGGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCATCATAGTGCTTGTGAGTGTTTGCTTTGTTTTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGTATTTTATATCTATTCCGCCCTGTGCTTACGGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTAGCTTCGCAGGACTATGATTTTGACGACGACGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCACTTATCAGGGCAATATATAACAGTTGCGGCATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAGCTGAACGAAAGATATACACTAAGGTTCAACGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTGAGAATGTTGACTAAATTTCGTGGGTTATCTGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGGAAGCCATAATAGGTAGAGTTGTGGGTGCGGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTCAAAAGACTGCTTGAGAGCGGAAACGTTTCTGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTAATACATTCGTATCCTACTCCGTTGGCTAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTCCTGCTAAACCTCCCAACATCCCGCCTCCTCCGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGGAACGCAAACGCACGCAAGAAAAGAACTTGACGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATACAACAGACTTGAGGATATTTACCCAACAATGTTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATGTTATGGTCTGCGATTTTGGCTTTAAATGCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAGTTCTCTACAGGCAACATGTGATTTGCCTCATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGTTGCATAACTGCACCACAATACCTGCGTAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTTTCTGTAGATGTGTTTCGCTTTTTCAAATGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTTTCAGAATAATCAGGGATATTTACTATCAAAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAAATGTTATAATAAGACAAGGCACAGACACTTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGTCTGTTTGAGGCAATATGCCCAGTTCTTTCTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTAGTTTCTAAATCTTTCTGCAGTGCTTCAAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGATTGGAAAGATACAGCTCTGGACTTTATAGGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTCCCATTTCTCCTGCCCGCCCTCGTAGCCTTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGCAAAGCTGTAAACACAGAAGCCAAATGGGCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTCATATCCTTCTTTTGGTGCAATAAAGAATTGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCATCTCTAGTGCAAACAGTGCGTTTTCGTTTACCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTACAGCTTTCTGATACAAAGCATTTATAGACTGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCCTAAACAACACTTCGTTTCTTTTCATTCTCTTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCCTCTTCAGCTGTATTTTCAAAATCAAACAATTGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATTTGCCTGCTTTCAGCGTAAGTAATAGAAGGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAATACAGATACATCCGTACCTTTCTCAAATCTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTACATAATCTGCGTAAGCTAACAGCCTGTAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTGACAAATAAATAATAATATGCTTATGTGGTGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTAAATATTCCGCATACATTTCGTAATAATCGTTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAATAGTATCTCCATCCTCGCTCAATCCCATCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGTGCTCTGAACATTTTGCCATCTTCTCTCTCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGCTATAAAATTATATAACCGCTGAACTCTTCCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACAGTGTTTGTATGATTTCTCAAAATCTTAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAATCCATTGGTCTCTATCCAGTATAGGTTTATTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGCACGTAGCTTCGGCAAATGCGATTTTAGGTGTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTAAAGGCATTAAACTTGTCAAATTTTGACATAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGCGAGTGCTTTTCCAACCGTGCGAGAAAAGATTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGCTGAATCTGAAGCAACGTATCTAAATAATAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTCGTGGCAGCCCCATTTCCTCATTTACTTCTGCGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTCTATCAAGTGGTGCATATAACGCATACATTTGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGCTCTTTCTCTTGCAGTTCAGCTTGTTTTATTATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTAATGAGTTTATGTTTTAGTAAAAGTAGAAGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATAATATGAGTGTTCGCGGCGTTCCACATCAACAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGAATGCAGTTTAATGTATTGTGTGTCCGTTCCTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGGTACGGGAGGCAAAAATGACGCGGGAAGAGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGCTTTAAACCTTAATTTCAGCACTGATAAAAGGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGTTATCTCCATATACAGGTATTCAAATATTAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAATCTTGAAAAGCCCTGTAAGATTAGATATGTAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTGACAAAATTGCCGACTTTTCTGATAAATTTCGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGGATTTTGTTTCCATTGGTGAAGACCTTTCAGAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGCCAATCGGCTGTGAAATTATTGTACCGCAAGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGTAGAATCGGACGCAATAGCTTTCCACTGGACAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGGATGTTATAACATACTTAACTATCAGAGAAAAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTCCTATATGGAAGTTATATCCTAAAGTGTTGCTGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACGACAACAGAAAAGACAAGTTGACTTTTTTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGCAAAAGTGATATTAACTGTTCCTCTTCCGCCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTCTTGAATTTATTGTAAATTTAATCAGACGTAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAAATGCTTCAGGATTTCAACCCTTCGAATCCCTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCCAGATCGCTTGATAGCCAAATGGCACATTATTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATTATGCCTCGTACCGCATATCAGCAAGGTATCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGATTAGGCACAAAGAAAAAATGTGTGTATACATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGCGTACGAGCGTGAGCAGGCTCGTTTGAACGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAATAATGCTCCAGTACCTTGAGGAACATTTAAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTCGTAGTGCGGAATAATCCGTGAACAGAATTCTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGGAGCAGATGGTGTGCCTACTTTCTGGTAAAGAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTATTTGCCGATATTTTTCAATCAAGGTGCTGGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTACACCTAAACATCGTTCAGCCGCTTCCGCTTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATATTGACAAGTGCGATTGTAATAATACATTGTGGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTTAGTTTGGAAGGAAAATCCTGTAACTGGTGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTTTCAGAATAATCAGGGATATTTACTATCAAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGGAGGAAATGTTCAGAGGGCGGTGTCCCCAAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTTAAAAGTATCCATAAAGATATTCTGGAGGATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTAAAATAATCAGTGAATAACTGGTCCCCTTCTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGATAAGCGTAAGAATTGGTATGTGAGAGAGAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGACGGAAAACCGAAAGTAGACGGACAGATATGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGGTACCACGGATGAGCAGCGCCCGCAACAGAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGCAGATGGAACCGTCGGACGCTGTCAATTTTGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGATAGATATGTCAAAATTTGACAAGTTTAATGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTCCCTGTGCCTGTAAGAAACTTCGTGCCAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAGCCCTTGACAAATAAATAAAAATATGATTGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTTATTTTCAGGTGCTTGTACCTCTGGTACCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGCAAAAAGGTTTTAACATATCCAAAACAAATTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGTTACCCACTCAATATTCGAGTTAAATGCTACTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGGCGCAATATTATTCCGCTGGCAACGTTGCAGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGAAATAAAAAACAAAAGCACAGCGGAGGCAAAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGCTCAATTACAATTTAACGATTATAGATTTTCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGGAACGGTAAAAAAACGGTTCGTTTTCACCGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAACTGTGCAACACGCATTCCAGGGTAGCACTTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTGTATTGGAAATCTTTAGCTTTGCCTTCTTTAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTATCGCCAGCGTCCACCAATGTTTTAACATCGCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAATCCTGACATATCTAACTCCTCTTCCACTGACGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACTATGAATAGATATTCCGACGAATTGTTTGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAGAAAAGAAGCCTTGATAATATCGTAGAAGGGCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACTGCCACACCGTATACACTGCGTATATAATCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATTTTCGTAGTTGATATCGTGTTTCAGTTGATGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTTTGATTTTAGTAGATATGTTTCACCTGCCATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATAATCTTTATCCTCGTTTGCCGTATGAAAATCCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTAATCATAAGCATTTTAGGACATTTATTGAGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTTGTACCTTCAATTTCTGTGCAACGAGCGCCTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGATCCCGGTATCGAGCGACGGCAGAGCGCCTGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATTTTCTAAGAAATGTTCCTGATTTTCTTTTCTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAATGAATTCACGCAACTGCCGTTCGAATCGTATCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAATCCTCGTATGCTTTTGCTACTGTAATTACAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCATTAAAAACAACTGTTTTATATACTCCTCTGAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTCCAATTAGTTTCCTTTATATTTGCCTCTGCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTAATATTAAGTGTACAGGATTTGCCCTGTTTATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTAATATTAAGTGTACAGGATTTGCCCTGTTTATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAGTCCCCTTGACTTTTAAATAAAAATATGATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTGCCTACATCAATTATTATGCTGTTGTTGTGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGCGATGTTATGATCTCTATATACAGGTATTCCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAATTAAGACTGTACAATTCGTTGAGGAGAGTATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGACGGGACAGCAGATAGCCAATGTGCCAGACTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGCTCTGAATACTCCGTGCTGGCTTAAAGGTGCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGACAATTATCTACAGATTACGGGAGTTGACGGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTCTCAGATACGCTTGAGAAAGGCAAAGAACTTCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTGACGAAGTAATTGTTGATAAATTTGCTGTTGAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATACAAATTTGGCAGAGCTTTAGACTTACATTTGAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAATCCCTGATTTACAAGGCTCTCTTCCAACTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT

>NZ_AP017459|3|1|327357-332674|PILER-CR
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATGTTGTGAGCGTTCCGCCGTTCACTGCATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTTTGGGATCGGCCTGATTGCGGTACAGTGGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACTGAAGCCCAAAACTTCGAGCAGAAAATGCAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGAAATAGGTTATCGTACAAATAATGAGCAAATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GAAGTATGCTAGTCTTGGTAGTTCAATGTTCGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCATAGTGCTTGTGAGTGTTTGCTTTGTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGTATTTTATATCTATTCCGCCCTGTGCTTACGGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAGCTTCGCAGGACTATGATTTTGACGACGAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CACTTATCAGGGCAATATATAACAGTTGCGGCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGCTGAACGAAAGATATACACTAAGGTTCAAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGAGAATGTTGACTAAATTTCGTGGGTTATCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAAGCCATAATAGGTAGAGTTGTGGGTGCGGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCAAAAGACTGCTTGAGAGCGGAAACGTTTCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATACATTCGTATCCTACTCCGTTGGCTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCCTGCTAAACCTCCCAACATCCCGCCTCCTCCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAACGCAAACGCACGCAAGAAAAGAACTTGACG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAACAGACTTGAGGATATTTACCCAACAATGTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATGTTATGGTCTGCGATTTTGGCTTTAAATGCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGTTCTCTACAGGCAACATGTGATTTGCCTCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTTGCATAACTGCACCACAATACCTGCGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTTTCTGTAGATGTGTTTCGCTTTTTCAAATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAAATGTTATAATAAGACAAGGCACAGACACTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTCTGTTTGAGGCAATATGCCCAGTTCTTTCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTAGTTTCTAAATCTTTCTGCAGTGCTTCAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGATTGGAAAGATACAGCTCTGGACTTTATAGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTCCCATTTCTCCTGCCCGCCCTCGTAGCCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCAAAGCTGTAAACACAGAAGCCAAATGGGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTCATATCCTTCTTTTGGTGCAATAAAGAATTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCTCTAGTGCAAACAGTGCGTTTTCGTTTACC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACAGCTTTCTGATACAAAGCATTTATAGACTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTAAACAACACTTCGTTTCTTTTCATTCTCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTCTTCAGCTGTATTTTCAAAATCAAACAATTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTGCCTGCTTTCAGCGTAAGTAATAGAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATACAGATACATCCGTACCTTTCTCAAATCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACATAATCTGCGTAAGCTAACAGCCTGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAATAAATAATAATATGCTTATGTGGTGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAAATATTCCGCATACATTTCGTAATAATCGTTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATAGTATCTCCATCCTCGCTCAATCCCATCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTGCTCTGAACATTTTGCCATCTTCTCTCTCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCTATAAAATTATATAACCGCTGAACTCTTCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACAGTGTTTGTATGATTTCTCAAAATCTTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCCATTGGTCTCTATCCAGTATAGGTTTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCACGTAGCTTCGGCAAATGCGATTTTAGGTGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAAAGGCATTAAACTTGTCAAATTTTGACATA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGAGTGCTTTTCCAACCGTGCGAGAAAAGATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCTGAATCTGAAGCAACGTATCTAAATAATAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCGTGGCAGCCCCATTTCCTCATTTACTTCTGCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGCCCCGTGTGGGCGCGTGAATTGAAATTTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTATCAAGTGGTGCATATAACGCATACATTTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTTTCTCTTGCAGTTCAGCTTGTTTTATTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAATGAGTTTATGTTTTAGTAAAAGTAGAAGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATAATATGAGTGTTCGCGGCGTTCCACATCAACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGAATGCAGTTTAATGTATTGTGTGTCCGTTCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGTACGGGAGGCAAAAATGACGCGGGAAGAGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTTTAAACCTTAATTTCAGCACTGATAAAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTTATCTCCATATACAGGTATTCAAATATTAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCTTGAAAAGCCCTGTAAGATTAGATATGTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAAATTGCCGACTTTTCTGATAAATTTCGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGATTTTGTTTCCATTGGTGAAGACCTTTCAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCCAATCGGCTGTGAAATTATTGTACCGCAAGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTAGAATCGGACGCAATAGCTTTCCACTGGACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGATGTTATAACATACTTAACTATCAGAGAAAAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCCTATATGGAAGTTATATCCTAAAGTGTTGCTGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACGACAACAGAAAAGACAAGTTGACTTTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCAAAAGTGATATTAACTGTTCCTCTTCCGCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTTGAATTTATTGTAAATTTAATCAGACGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAAATGCTTCAGGATTTCAACCCTTCGAATCCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCAGATCGCTTGATAGCCAAATGGCACATTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTATGCCTCGTACCGCATATCAGCAAGGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GATTAGGCACAAAGAAAAAATGTGTGTATACAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGTACGAGCGTGAGCAGGCTCGTTTGAACGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATAATGCTCCAGTACCTTGAGGAACATTTAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTCGTAGTGCGGAATAATCCGTGAACAGAATTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGAGCAGATGGTGTGCCTACTTTCTGGTAAAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATTTGCCGATATTTTTCAATCAAGGTGCTGGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACACCTAAACATCGTTCAGCCGCTTCCGCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATATTGACAAGTGCGATTGTAATAATACATTGTGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTTAGTTTGGAAGGAAAATCCTGTAACTGGTGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGGAGGAAATGTTCAGAGGGCGGTGTCCCCAAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTTAAAAGTATCCATAAAGATATTCTGGAGGATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTAAAATAATCAGTGAATAACTGGTCCCCTTCTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGATAAGCGTAAGAATTGGTATGTGAGAGAGAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGACGGAAAACCGAAAGTAGACGGACAGATATGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGGTACCACGGATGAGCAGCGCCCGCAACAGAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGCAGATGGAACCGTCGGACGCTGTCAATTTTGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGATAGATATGTCAAAATTTGACAAGTTTAATGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTCCCTGTGCCTGTAAGAAACTTCGTGCCAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAGCCCTTGACAAATAAATAAAAATATGATTGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTTATTTTCAGGTGCTTGTACCTCTGGTACCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGCAAAAAGGTTTTAACATATCCAAAACAAATTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGTTACCCACTCAATATTCGAGTTAAATGCTACTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGGCGCAATATTATTCCGCTGGCAACGTTGCAGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGAAATAAAAAACAAAAGCACAGCGGAGGCAAAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGCTCAATTACAATTTAACGATTATAGATTTTCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGGAACGGTAAAAAAACGGTTCGTTTTCACCGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAACTGTGCAACACGCATTCCAGGGTAGCACTTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTGTATTGGAAATCTTTAGCTTTGCCTTCTTTAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTATCGCCAGCGTCCACCAATGTTTTAACATCGCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAATCCTGACATATCTAACTCCTCTTCCACTGACGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACTATGAATAGATATTCCGACGAATTGTTTGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAGAAAAGAAGCCTTGATAATATCGTAGAAGGGCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACTGCCACACCGTATACACTGCGTATATAATCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATTTTCGTAGTTGATATCGTGTTTCAGTTGATGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTTTGATTTTAGTAGATATGTTTCACCTGCCATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATAATCTTTATCCTCGTTTGCCGTATGAAAATCCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTAATCATAAGCATTTTAGGACATTTATTGAGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTTGTACCTTCAATTTCTGTGCAACGAGCGCCTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGATCCCGGTATCGAGCGACGGCAGAGCGCCTGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTTCTAAGAAATGTTCCTGATTTTCTTTTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATGAATTCACGCAACTGCCGTTCGAATCGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATCCTCGTATGCTTTTGCTACTGTAATTACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATTAAAAACAACTGTTTTATATACTCCTCTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTCCAATTAGTTTCCTTTATATTTGCCTCTGCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAGTCCCCTTGACTTTTAAATAAAAATATGATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTGCCTACATCAATTATTATGCTGTTGTTGTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCGATGTTATGATCTCTATATACAGGTATTCCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATTAAGACTGTACAATTCGTTGAGGAGAGTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGACGGGACAGCAGATAGCCAATGTGCCAGACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTGAATACTCCGTGCTGGCTTAAAGGTGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGACAATTATCTACAGATTACGGGAGTTGACGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCTCAGATACGCTTGAGAAAGGCAAAGAACTTCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACGAAGTAATTGTTGATAAATTTGCTGTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAAATTTGGCAGAGCTTTAGACTTACATTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATCCCTGATTTACAAGGCTCTCTTCCAACTT


>NZ_AP017459|3|3|327357-335841|CRISPRCasFinder
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATGTTGTGAGCGTTCCGCCGTTCACTGCATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTTTGGGATCGGCCTGATTGCGGTACAGTGGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACTGAAGCCCAAAACTTCGAGCAGAAAATGCAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGAAATAGGTTATCGTACAAATAATGAGCAAATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GAAGTATGCTAGTCTTGGTAGTTCAATGTTCGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCATAGTGCTTGTGAGTGTTTGCTTTGTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGTATTTTATATCTATTCCGCCCTGTGCTTACGGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAGCTTCGCAGGACTATGATTTTGACGACGAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CACTTATCAGGGCAATATATAACAGTTGCGGCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGCTGAACGAAAGATATACACTAAGGTTCAAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGAGAATGTTGACTAAATTTCGTGGGTTATCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAAGCCATAATAGGTAGAGTTGTGGGTGCGGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCAAAAGACTGCTTGAGAGCGGAAACGTTTCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATACATTCGTATCCTACTCCGTTGGCTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCCTGCTAAACCTCCCAACATCCCGCCTCCTCCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAACGCAAACGCACGCAAGAAAAGAACTTGACG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAACAGACTTGAGGATATTTACCCAACAATGTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATGTTATGGTCTGCGATTTTGGCTTTAAATGCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGTTCTCTACAGGCAACATGTGATTTGCCTCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTTGCATAACTGCACCACAATACCTGCGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTTTCTGTAGATGTGTTTCGCTTTTTCAAATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAAATGTTATAATAAGACAAGGCACAGACACTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTCTGTTTGAGGCAATATGCCCAGTTCTTTCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTAGTTTCTAAATCTTTCTGCAGTGCTTCAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGATTGGAAAGATACAGCTCTGGACTTTATAGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTCCCATTTCTCCTGCCCGCCCTCGTAGCCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCAAAGCTGTAAACACAGAAGCCAAATGGGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTCATATCCTTCTTTTGGTGCAATAAAGAATTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCTCTAGTGCAAACAGTGCGTTTTCGTTTACC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACAGCTTTCTGATACAAAGCATTTATAGACTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTAAACAACACTTCGTTTCTTTTCATTCTCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTCTTCAGCTGTATTTTCAAAATCAAACAATTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTGCCTGCTTTCAGCGTAAGTAATAGAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATACAGATACATCCGTACCTTTCTCAAATCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACATAATCTGCGTAAGCTAACAGCCTGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAATAAATAATAATATGCTTATGTGGTGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAAATATTCCGCATACATTTCGTAATAATCGTTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATAGTATCTCCATCCTCGCTCAATCCCATCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTGCTCTGAACATTTTGCCATCTTCTCTCTCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCTATAAAATTATATAACCGCTGAACTCTTCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACAGTGTTTGTATGATTTCTCAAAATCTTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCCATTGGTCTCTATCCAGTATAGGTTTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCACGTAGCTTCGGCAAATGCGATTTTAGGTGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAAAGGCATTAAACTTGTCAAATTTTGACATA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGAGTGCTTTTCCAACCGTGCGAGAAAAGATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCTGAATCTGAAGCAACGTATCTAAATAATAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCGTGGCAGCCCCATTTCCTCATTTACTTCTGCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGCCCCGTGTGGGCGCGTGAATTGAAATTTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTATCAAGTGGTGCATATAACGCATACATTTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTTTCTCTTGCAGTTCAGCTTGTTTTATTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAATGAGTTTATGTTTTAGTAAAAGTAGAAGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATAATATGAGTGTTCGCGGCGTTCCACATCAACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGAATGCAGTTTAATGTATTGTGTGTCCGTTCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGTACGGGAGGCAAAAATGACGCGGGAAGAGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTTTAAACCTTAATTTCAGCACTGATAAAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTTATCTCCATATACAGGTATTCAAATATTAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCTTGAAAAGCCCTGTAAGATTAGATATGTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAAATTGCCGACTTTTCTGATAAATTTCGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGATTTTGTTTCCATTGGTGAAGACCTTTCAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCCAATCGGCTGTGAAATTATTGTACCGCAAGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTAGAATCGGACGCAATAGCTTTCCACTGGACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGATGTTATAACATACTTAACTATCAGAGAAAAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCCTATATGGAAGTTATATCCTAAAGTGTTGCTGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACGACAACAGAAAAGACAAGTTGACTTTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCAAAAGTGATATTAACTGTTCCTCTTCCGCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTTGAATTTATTGTAAATTTAATCAGACGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAAATGCTTCAGGATTTCAACCCTTCGAATCCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCAGATCGCTTGATAGCCAAATGGCACATTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTATGCCTCGTACCGCATATCAGCAAGGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GATTAGGCACAAAGAAAAAATGTGTGTATACAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGTACGAGCGTGAGCAGGCTCGTTTGAACGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATAATGCTCCAGTACCTTGAGGAACATTTAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTCGTAGTGCGGAATAATCCGTGAACAGAATTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGAGCAGATGGTGTGCCTACTTTCTGGTAAAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATTTGCCGATATTTTTCAATCAAGGTGCTGGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACACCTAAACATCGTTCAGCCGCTTCCGCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATATTGACAAGTGCGATTGTAATAATACATTGTGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTTAGTTTGGAAGGAAAATCCTGTAACTGGTGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGGAGGAAATGTTCAGAGGGCGGTGTCCCCAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTTAAAAGTATCCATAAAGATATTCTGGAGGAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAAAATAATCAGTGAATAACTGGTCCCCTTCTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGATAAGCGTAAGAATTGGTATGTGAGAGAGAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGACGGAAAACCGAAAGTAGACGGACAGATATG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGGTACCACGGATGAGCAGCGCCCGCAACAGAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCAGATGGAACCGTCGGACGCTGTCAATTTTGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGATAGATATGTCAAAATTTGACAAGTTTAATGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTCCCTGTGCCTGTAAGAAACTTCGTGCCAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAGCCCTTGACAAATAAATAAAAATATGATTGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTTATTTTCAGGTGCTTGTACCTCTGGTACCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCAAAAAGGTTTTAACATATCCAAAACAAATTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTTACCCACTCAATATTCGAGTTAAATGCTACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGCGCAATATTATTCCGCTGGCAACGTTGCAGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGAAATAAAAAACAAAAGCACAGCGGAGGCAAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCTCAATTACAATTTAACGATTATAGATTTTCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAACGGTAAAAAAACGGTTCGTTTTCACCGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAACTGTGCAACACGCATTCCAGGGTAGCACTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTGTATTGGAAATCTTTAGCTTTGCCTTCTTTAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTATCGCCAGCGTCCACCAATGTTTTAACATCGCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATCCTGACATATCTAACTCCTCTTCCACTGAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACTATGAATAGATATTCCGACGAATTGTTTGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGAAAAGAAGCCTTGATAATATCGTAGAAGGGCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACTGCCACACCGTATACACTGCGTATATAATCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTTCGTAGTTGATATCGTGTTTCAGTTGATG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTTTGATTTTAGTAGATATGTTTCACCTGCCATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATAATCTTTATCCTCGTTTGCCGTATGAAAATCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTAATCATAAGCATTTTAGGACATTTATTGAGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTGTACCTTCAATTTCTGTGCAACGAGCGCCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GATCCCGGTATCGAGCGACGGCAGAGCGCCTGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTTCTAAGAAATGTTCCTGATTTTCTTTTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATGAATTCACGCAACTGCCGTTCGAATCGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATCCTCGTATGCTTTTGCTACTGTAATTACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATTAAAAACAACTGTTTTATATACTCCTCTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTCCAATTAGTTTCCTTTATATTTGCCTCTGCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAGTCCCCTTGACTTTTAAATAAAAATATGATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTGCCTACATCAATTATTATGCTGTTGTTGTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCGATGTTATGATCTCTATATACAGGTATTCCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATTAAGACTGTACAATTCGTTGAGGAGAGTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGACGGGACAGCAGATAGCCAATGTGCCAGACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTGAATACTCCGTGCTGGCTTAAAGGTGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGACAATTATCTACAGATTACGGGAGTTGACGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCTCAGATACGCTTGAGAAAGGCAAAGAACTTCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACGAAGTAATTGTTGATAAATTTGCTGTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAAATTTGGCAGAGCTTTAGACTTACATTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATCCCTGATTTACAAGGCTCTCTTCCAACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT

>NZ_AP017459|3|1|327357-335841|CRT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATGTTGTGAGCGTTCCGCCGTTCACTGCATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTTTGGGATCGGCCTGATTGCGGTACAGTGGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACTGAAGCCCAAAACTTCGAGCAGAAAATGCAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGAAATAGGTTATCGTACAAATAATGAGCAAATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GAAGTATGCTAGTCTTGGTAGTTCAATGTTCGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCATAGTGCTTGTGAGTGTTTGCTTTGTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGTATTTTATATCTATTCCGCCCTGTGCTTACGGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAGCTTCGCAGGACTATGATTTTGACGACGAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CACTTATCAGGGCAATATATAACAGTTGCGGCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGCTGAACGAAAGATATACACTAAGGTTCAAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGAGAATGTTGACTAAATTTCGTGGGTTATCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAAGCCATAATAGGTAGAGTTGTGGGTGCGGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCAAAAGACTGCTTGAGAGCGGAAACGTTTCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATACATTCGTATCCTACTCCGTTGGCTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCCTGCTAAACCTCCCAACATCCCGCCTCCTCCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAACGCAAACGCACGCAAGAAAAGAACTTGACG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAACAGACTTGAGGATATTTACCCAACAATGTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATGTTATGGTCTGCGATTTTGGCTTTAAATGCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGTTCTCTACAGGCAACATGTGATTTGCCTCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTTGCATAACTGCACCACAATACCTGCGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTTTCTGTAGATGTGTTTCGCTTTTTCAAATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAAATGTTATAATAAGACAAGGCACAGACACTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTCTGTTTGAGGCAATATGCCCAGTTCTTTCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTAGTTTCTAAATCTTTCTGCAGTGCTTCAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGATTGGAAAGATACAGCTCTGGACTTTATAGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTCCCATTTCTCCTGCCCGCCCTCGTAGCCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCAAAGCTGTAAACACAGAAGCCAAATGGGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTCATATCCTTCTTTTGGTGCAATAAAGAATTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCTCTAGTGCAAACAGTGCGTTTTCGTTTACC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACAGCTTTCTGATACAAAGCATTTATAGACTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTAAACAACACTTCGTTTCTTTTCATTCTCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTCTTCAGCTGTATTTTCAAAATCAAACAATTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTGCCTGCTTTCAGCGTAAGTAATAGAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATACAGATACATCCGTACCTTTCTCAAATCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACATAATCTGCGTAAGCTAACAGCCTGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAATAAATAATAATATGCTTATGTGGTGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAAATATTCCGCATACATTTCGTAATAATCGTTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATAGTATCTCCATCCTCGCTCAATCCCATCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTGCTCTGAACATTTTGCCATCTTCTCTCTCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCTATAAAATTATATAACCGCTGAACTCTTCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACAGTGTTTGTATGATTTCTCAAAATCTTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCCATTGGTCTCTATCCAGTATAGGTTTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCACGTAGCTTCGGCAAATGCGATTTTAGGTGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAAAGGCATTAAACTTGTCAAATTTTGACATA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGAGTGCTTTTCCAACCGTGCGAGAAAAGATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCTGAATCTGAAGCAACGTATCTAAATAATAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCGTGGCAGCCCCATTTCCTCATTTACTTCTGCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGCCCCGTGTGGGCGCGTGAATTGAAATTTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTATCAAGTGGTGCATATAACGCATACATTTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTTTCTCTTGCAGTTCAGCTTGTTTTATTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAATGAGTTTATGTTTTAGTAAAAGTAGAAGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATAATATGAGTGTTCGCGGCGTTCCACATCAACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGAATGCAGTTTAATGTATTGTGTGTCCGTTCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGTACGGGAGGCAAAAATGACGCGGGAAGAGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTTTAAACCTTAATTTCAGCACTGATAAAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTTATCTCCATATACAGGTATTCAAATATTAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCTTGAAAAGCCCTGTAAGATTAGATATGTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAAATTGCCGACTTTTCTGATAAATTTCGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGATTTTGTTTCCATTGGTGAAGACCTTTCAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCCAATCGGCTGTGAAATTATTGTACCGCAAGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTAGAATCGGACGCAATAGCTTTCCACTGGACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGATGTTATAACATACTTAACTATCAGAGAAAAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCCTATATGGAAGTTATATCCTAAAGTGTTGCTGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACGACAACAGAAAAGACAAGTTGACTTTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCAAAAGTGATATTAACTGTTCCTCTTCCGCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTTGAATTTATTGTAAATTTAATCAGACGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAAATGCTTCAGGATTTCAACCCTTCGAATCCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCAGATCGCTTGATAGCCAAATGGCACATTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTATGCCTCGTACCGCATATCAGCAAGGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GATTAGGCACAAAGAAAAAATGTGTGTATACAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGTACGAGCGTGAGCAGGCTCGTTTGAACGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATAATGCTCCAGTACCTTGAGGAACATTTAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTCGTAGTGCGGAATAATCCGTGAACAGAATTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGAGCAGATGGTGTGCCTACTTTCTGGTAAAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATTTGCCGATATTTTTCAATCAAGGTGCTGGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACACCTAAACATCGTTCAGCCGCTTCCGCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATATTGACAAGTGCGATTGTAATAATACATTGTGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTTAGTTTGGAAGGAAAATCCTGTAACTGGTGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGGAGGAAATGTTCAGAGGGCGGTGTCCCCAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTTAAAAGTATCCATAAAGATATTCTGGAGGAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAAAATAATCAGTGAATAACTGGTCCCCTTCTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGATAAGCGTAAGAATTGGTATGTGAGAGAGAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGACGGAAAACCGAAAGTAGACGGACAGATATG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGGTACCACGGATGAGCAGCGCCCGCAACAGAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCAGATGGAACCGTCGGACGCTGTCAATTTTGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGATAGATATGTCAAAATTTGACAAGTTTAATGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTCCCTGTGCCTGTAAGAAACTTCGTGCCAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAGCCCTTGACAAATAAATAAAAATATGATTGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTTATTTTCAGGTGCTTGTACCTCTGGTACCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCAAAAAGGTTTTAACATATCCAAAACAAATTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTTACCCACTCAATATTCGAGTTAAATGCTACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGCGCAATATTATTCCGCTGGCAACGTTGCAGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGAAATAAAAAACAAAAGCACAGCGGAGGCAAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCTCAATTACAATTTAACGATTATAGATTTTCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAACGGTAAAAAAACGGTTCGTTTTCACCGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAACTGTGCAACACGCATTCCAGGGTAGCACTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTGTATTGGAAATCTTTAGCTTTGCCTTCTTTAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTATCGCCAGCGTCCACCAATGTTTTAACATCGCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATCCTGACATATCTAACTCCTCTTCCACTGAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACTATGAATAGATATTCCGACGAATTGTTTGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGAAAAGAAGCCTTGATAATATCGTAGAAGGGCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACTGCCACACCGTATACACTGCGTATATAATCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTTCGTAGTTGATATCGTGTTTCAGTTGATG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTTTGATTTTAGTAGATATGTTTCACCTGCCATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATAATCTTTATCCTCGTTTGCCGTATGAAAATCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTAATCATAAGCATTTTAGGACATTTATTGAGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTGTACCTTCAATTTCTGTGCAACGAGCGCCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GATCCCGGTATCGAGCGACGGCAGAGCGCCTGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTTCTAAGAAATGTTCCTGATTTTCTTTTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATGAATTCACGCAACTGCCGTTCGAATCGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATCCTCGTATGCTTTTGCTACTGTAATTACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATTAAAAACAACTGTTTTATATACTCCTCTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTCCAATTAGTTTCCTTTATATTTGCCTCTGCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAGTCCCCTTGACTTTTAAATAAAAATATGATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTGCCTACATCAATTATTATGCTGTTGTTGTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCGATGTTATGATCTCTATATACAGGTATTCCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATTAAGACTGTACAATTCGTTGAGGAGAGTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGACGGGACAGCAGATAGCCAATGTGCCAGACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTGAATACTCCGTGCTGGCTTAAAGGTGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGACAATTATCTACAGATTACGGGAGTTGACGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCTCAGATACGCTTGAGAAAGGCAAAGAACTTCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACGAAGTAATTGTTGATAAATTTGCTGTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAAATTTGGCAGAGCTTTAGACTTACATTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATCCCTGATTTACAAGGCTCTCTTCCAACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT

>NZ_AP017459|3|2|334626-335841|PILER-CR
	GTATGTTGTGAGCGTTCCGCCGTTCACTGCATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTTTGGGATCGGCCTGATTGCGGTACAGTGGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACTGAAGCCCAAAACTTCGAGCAGAAAATGCAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGAAATAGGTTATCGTACAAATAATGAGCAAATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GAAGTATGCTAGTCTTGGTAGTTCAATGTTCGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCATAGTGCTTGTGAGTGTTTGCTTTGTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGTATTTTATATCTATTCCGCCCTGTGCTTACGGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAGCTTCGCAGGACTATGATTTTGACGACGAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CACTTATCAGGGCAATATATAACAGTTGCGGCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGCTGAACGAAAGATATACACTAAGGTTCAAC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGAGAATGTTGACTAAATTTCGTGGGTTATCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAAGCCATAATAGGTAGAGTTGTGGGTGCGGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCAAAAGACTGCTTGAGAGCGGAAACGTTTCTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATACATTCGTATCCTACTCCGTTGGCTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCCTGCTAAACCTCCCAACATCCCGCCTCCTCCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGAACGCAAACGCACGCAAGAAAAGAACTTGACG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAACAGACTTGAGGATATTTACCCAACAATGTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATGTTATGGTCTGCGATTTTGGCTTTAAATGCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAGTTCTCTACAGGCAACATGTGATTTGCCTCAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTTGCATAACTGCACCACAATACCTGCGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTTTCTGTAGATGTGTTTCGCTTTTTCAAATGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAAATGTTATAATAAGACAAGGCACAGACACTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTCTGTTTGAGGCAATATGCCCAGTTCTTTCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTAGTTTCTAAATCTTTCTGCAGTGCTTCAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGATTGGAAAGATACAGCTCTGGACTTTATAGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTCCCATTTCTCCTGCCCGCCCTCGTAGCCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCAAAGCTGTAAACACAGAAGCCAAATGGGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTCATATCCTTCTTTTGGTGCAATAAAGAATTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATCTCTAGTGCAAACAGTGCGTTTTCGTTTACC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACAGCTTTCTGATACAAAGCATTTATAGACTGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTAAACAACACTTCGTTTCTTTTCATTCTCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCTCTTCAGCTGTATTTTCAAAATCAAACAATTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTGCCTGCTTTCAGCGTAAGTAATAGAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATACAGATACATCCGTACCTTTCTCAAATCTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTACATAATCTGCGTAAGCTAACAGCCTGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAATAAATAATAATATGCTTATGTGGTGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAAATATTCCGCATACATTTCGTAATAATCGTTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATAGTATCTCCATCCTCGCTCAATCCCATCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTGCTCTGAACATTTTGCCATCTTCTCTCTCTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCTATAAAATTATATAACCGCTGAACTCTTCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACAGTGTTTGTATGATTTCTCAAAATCTTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCCATTGGTCTCTATCCAGTATAGGTTTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCACGTAGCTTCGGCAAATGCGATTTTAGGTGTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAAAGGCATTAAACTTGTCAAATTTTGACATA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGAGTGCTTTTCCAACCGTGCGAGAAAAGATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGCTGAATCTGAAGCAACGTATCTAAATAATAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCGTGGCAGCCCCATTTCCTCATTTACTTCTGCG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGCCCCGTGTGGGCGCGTGAATTGAAATTTTC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTATCAAGTGGTGCATATAACGCATACATTTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTTTCTCTTGCAGTTCAGCTTGTTTTATTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTAATGAGTTTATGTTTTAGTAAAAGTAGAAGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATAATATGAGTGTTCGCGGCGTTCCACATCAACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGAATGCAGTTTAATGTATTGTGTGTCCGTTCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGTACGGGAGGCAAAAATGACGCGGGAAGAGTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTTTAAACCTTAATTTCAGCACTGATAAAAGGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGTTATCTCCATATACAGGTATTCAAATATTAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATCTTGAAAAGCCCTGTAAGATTAGATATGTAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACAAAATTGCCGACTTTTCTGATAAATTTCGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGATTTTGTTTCCATTGGTGAAGACCTTTCAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCCAATCGGCTGTGAAATTATTGTACCGCAAGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTGTAGAATCGGACGCAATAGCTTTCCACTGGACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GGATGTTATAACATACTTAACTATCAGAGAAAAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCCTATATGGAAGTTATATCCTAAAGTGTTGCTGT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AACGACAACAGAAAAGACAAGTTGACTTTTTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CGCAAAAGTGATATTAACTGTTCCTCTTCCGCCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTCTTGAATTTATTGTAAATTTAATCAGACGTAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAAATGCTTCAGGATTTCAACCCTTCGAATCCCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CCAGATCGCTTGATAGCCAAATGGCACATTATTA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTATGCCTCGTACCGCATATCAGCAAGGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GATTAGGCACAAAGAAAAAATGTGTGTATACAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GCGTACGAGCGTGAGCAGGCTCGTTTGAACGAG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATAATGCTCCAGTACCTTGAGGAACATTTAAAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTTCGTAGTGCGGAATAATCCGTGAACAGAATTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGGAGCAGATGGTGTGCCTACTTTCTGGTAAAGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	GTATTTGCCGATATTTTTCAATCAAGGTGCTGGC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TACACCTAAACATCGTTCAGCCGCTTCCGCTTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATATTGACAAGTGCGATTGTAATAATACATTGTGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTTAGTTTGGAAGGAAAATCCTGTAACTGGTGA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CTTTCAGAATAATCAGGGATATTTACTATCAAAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGGAGGAAATGTTCAGAGGGCGGTGTCCCCAAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTTAAAAGTATCCATAAAGATATTCTGGAGGATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTAAAATAATCAGTGAATAACTGGTCCCCTTCTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGATAAGCGTAAGAATTGGTATGTGAGAGAGAATGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTGACGGAAAACCGAAAGTAGACGGACAGATATGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGGTACCACGGATGAGCAGCGCCCGCAACAGAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGCAGATGGAACCGTCGGACGCTGTCAATTTTGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGATAGATATGTCAAAATTTGACAAGTTTAATGCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTCCCTGTGCCTGTAAGAAACTTCGTGCCAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAGCCCTTGACAAATAAATAAAAATATGATTGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATTTATTTTCAGGTGCTTGTACCTCTGGTACCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTGCAAAAAGGTTTTAACATATCCAAAACAAATTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGTTACCCACTCAATATTCGAGTTAAATGCTACTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAGGCGCAATATTATTCCGCTGGCAACGTTGCAGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGAAATAAAAAACAAAAGCACAGCGGAGGCAAAAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCGCTCAATTACAATTTAACGATTATAGATTTTCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGGAACGGTAAAAAAACGGTTCGTTTTCACCGTAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAACTGTGCAACACGCATTCCAGGGTAGCACTTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTTGTATTGGAAATCTTTAGCTTTGCCTTCTTTAAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTATCGCCAGCGTCCACCAATGTTTTAACATCGCCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAAATCCTGACATATCTAACTCCTCTTCCACTGACGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACTATGAATAGATATTCCGACGAATTGTTTGAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCAGAAAAGAAGCCTTGATAATATCGTAGAAGGGCTTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATAACTGCCACACCGTATACACTGCGTATATAATCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTATTTTCGTAGTTGATATCGTGTTTCAGTTGATGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGTTTGATTTTAGTAGATATGTTTCACCTGCCATTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATATAATCTTTATCCTCGTTTGCCGTATGAAAATCCAGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATTTAATCATAAGCATTTTAGGACATTTATTGAGAGGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATCTTGTACCTTCAATTTCTGTGCAACGAGCGCCTCGTCGCGCCCCGTGTGGGCGCGTGAATTGAAATGATCCCGGTATCGAGCGACGGCAGAGCGCCTGTGTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TATTTTCTAAGAAATGTTCCTGATTTTCTTTTCT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AATGAATTCACGCAACTGCCGTTCGAATCGTATC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATCCTCGTATGCTTTTGCTACTGTAATTACA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CATTAAAAACAACTGTTTTATATACTCCTCTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTCCAATTAGTTTCCTTTATATTTGCCTCTGCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TAATATTAAGTGTACAGGATTTGCCCTGTTTATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAGTCCCCTTGACTTTTAAATAAAAATATGATT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ATTGCCTACATCAATTATTATGCTGTTGTTGTG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGCGATGTTATGATCTCTATATACAGGTATTCCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AAATTAAGACTGTACAATTCGTTGAGGAGAGTAT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	AGACGGGACAGCAGATAGCCAATGTGCCAGACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGCTCTGAATACTCCGTGCTGGCTTAAAGGTGCA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TGACAATTATCTACAGATTACGGGAGTTGACGG
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TCTCAGATACGCTTGAGAAAGGCAAAGAACTTCC
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	TTGACGAAGTAATTGTTGATAAATTTGCTGTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	ACAAATTTGGCAGAGCTTTAGACTTACATTTGAA
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT	CAATCCCTGATTTACAAGGCTCTCTTCCAACTT
GTCGCGCCCCGTGTGGGCGCGTGAATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017459.1\|WP_096525436.1\|324368_325220_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_AP017459.1\|WP_096525444.1\|342917_343373_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_AP017459.1\|WP_096525435.1\|322375_324385_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_AP017459.1\|WP_096525443.1\|340815_341004_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|376355
NZ_AP017459.1\|WP_096525434.1\|319195_321640_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP017459.1\|WP_096525440.1\|335954_337172_-\|MiaB/RimO-family-radical-SAM-methylthiotransferase	unknown	unknown	gnl\|CDD\|223694
NZ_AP017459.1\|WP_015423241.1\|341618_342053_+\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_AP017459.1\|WP_172412812.1\|317902_318775_+\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|238576
NZ_AP017459.1\|WP_096526004.1\|321641_322376_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_AP017459.1\|WP_015423242.1\|342155_342839_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_AP017459.1\|WP_015423092.1\|338849_340049_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
NZ_AP017459.1\|WP_096525432.1\|315403_317233_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_AP017459.1\|WP_172412813.1\|337550_337694_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017459.1\|WP_096525438.1\|325846_326881_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_AP017459.1\|WP_096525442.1\|337390_337597_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|349957
NZ_AP017459.1\|WP_096525439.1\|326890_327181_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP017459.1\|WP_015423238.1\|340551_340704_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|234783
NZ_AP017459.1\|WP_096525437.1\|325224_325863_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP017459.1\|WP_096525433.1\|317577_317913_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NZ_AP017459.1\|WP_015423240.1\|341016_341547_+\|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl\|CDD\|180161

Protein	Function_ID	Function_description	E-value
NZ_AP017459.1\|WP_096525436.1\|324368_325220_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	8.26613e-101
NZ_AP017459.1\|WP_096525444.1\|342917_343373_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	3.7172e-44
NZ_AP017459.1\|WP_096525435.1\|322375_324385_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	8.57124e-94
NZ_AP017459.1\|WP_096525443.1\|340815_341004_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	5.27254e-09
NZ_AP017459.1\|WP_096525434.1\|319195_321640_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.29921e-56
NZ_AP017459.1\|WP_096525440.1\|335954_337172_-\|MiaB/RimO-family-radical-SAM-methylthiotransferase	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	5.85752e-115
NZ_AP017459.1\|WP_015423241.1\|341618_342053_+\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	8.37875e-80
NZ_AP017459.1\|WP_172412812.1\|317902_318775_+\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	3.02526e-73
NZ_AP017459.1\|WP_096526004.1\|321641_322376_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	9.2661e-82
NZ_AP017459.1\|WP_015423242.1\|342155_342839_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	2.87504e-124
NZ_AP017459.1\|WP_015423092.1\|338849_340049_+\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
NZ_AP017459.1\|WP_096525432.1\|315403_317233_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_AP017459.1\|WP_096525438.1\|325846_326881_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_AP017459.1\|WP_096525442.1\|337390_337597_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|349957	cd18084, RsmE-like, SPOUT superfamily RNA methyltransferase RsmE-like. 16S rRNA m3U1498 methyltransferase RsmE modifies nucleotides during ribosomal RNA maturation in a site-specific manner. The Escherichia coli member is specific for U1498 methylation. RsmE is a member of the SPOUT (SpoU-TrmD) methyltransferase (MTase) superfamily, a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.03413e-08
NZ_AP017459.1\|WP_096525439.1\|326890_327181_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.34143e-29
NZ_AP017459.1\|WP_015423238.1\|340551_340704_+\|50S-ribosomal-protein-L33	gnl\|CDD\|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	1.32213e-12
NZ_AP017459.1\|WP_096525437.1\|325224_325863_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	1.30187e-36
NZ_AP017459.1\|WP_096525433.1\|317577_317913_+\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	3.91995e-28
NZ_AP017459.1\|WP_015423240.1\|341016_341547_+\|transcription-termination/antitermination-factor-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	7.62134e-79

>NZ_AP017459.1|WP_096525439.1|326890_327181_+|CRISPR-associated-endonuclease-Cas2
MLVLISYDISTIDAGGQKRLRRVSKECLDYGQRVQYSVFECEVDPTQWIFLKDKLLNTVNLKKDSIRFYMLGSDWKRKIEHYGCKKPVDLHGTLII
>NZ_AP017459.1|WP_096525438.1|325846_326881_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLFSTLYVSTQGAYISKERENIVVSLQSKELFRAPVHLINSVVCFGNIMCSPFLLGLCAENNASVSYFTEYGRFIAKVQSPVSGNVLLRKQQYKYSDDGKFCLETAQSVLLGKLSNSRTVINRALRDHEDKISDSDKLKQVSDGLRRAIANVFNAENVDVLRGMEGDAAVAYFSVFNKLILNHKEEFFMPGRNRRPPKDRVNCLLSFVYTLLVHDVSSALEGVGLDPQVGFLHKDRPGRPSLSLDIMEEFRSVIADRLVLTLINLSQVNANGFSESPSGGVIMDDENRKIVIDAYRKRKEEEIFHPFFKENIHIGLLYHAQALLFARYIRGDIDAYPPFIWK
>NZ_AP017459.1|WP_096525437.1|325224_325863_+|CRISPR-associated-protein-Cas4
MYCEDDLLHIRGVQQLSYCKRRCALLFIEQQWSDNFFTAKGIVMHDKAHVEKIEHKKGVVIERDIYLKSYELGLIGKSDVVEFHRSGNKLIPFPVEYKSGKAKSDNVDKVQLCAQALCLEEMMNVTIESGAIFYGKTRNRLNVEFNKSLREETFALAQEFHSLVDSRETPKPEYSKKCYNCSFEELCLPEIFDKQKSVKKYLKKIVNNEKTI
>NZ_AP017459.1|WP_096525436.1|324368_325220_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTLLSKKIDFVVIFKVKSANPNGDPLNENMPRTLADGIGEVTDVCIKRKIRNRLLDMNKDIFVQSDDYKKDKYSSLQERANKEIGEISKTSDFSTKACEKWMDVRAFGQVFAYEKGSSIGIRGPVTIRTAFSKEPIIVISDQITKSVNGKSNKKGNDSDDEGMASDRMGMKHWIREAIYVFYGAMNPQLAEKTAFTDEDAKDIKDVLPKLFEKDASSARPEGSMEILKVIWFEHNSPAGQYSSAKVHGSIKIDNSGNIENEKDLENGTVESIKGLKAEIIQGW
>NZ_AP017459.1|WP_096525435.1|322375_324385_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWFQRLYETYGNCVAAQGEFEIAPVAHTNKVCNIEITLNEKAEFIKAEFIKAEFIEAITPIPTTDDNNCLWPLAVDIKTYQKEKDKQGKELKVTYKKLLKEWSDTADIKIQIVNKYIQKNTLIQDLEKKGILWLSEDGKFIEKPKKDITDKYKIFQYVKKQKDAFIRWIVDTGEGLNRNTWEDEAIIESWINFRKQKENKKYKSEIEKTYRKIDKENNIVSRLTDDKICYISGEITDCITTNHPFANGTSKLIAVGDDLVFKGIFEEYYEALSVSFDVSQKAHNTLKWLISKEREQAYRNYPQIIVAFTINGKNGNVGLIFGEDFVKSAKGYRIDFEKFEEDEKIVKTSLQSRKHKIDFEKFEEDEKIVLLEMNAASPGRACITYYKELLGSQYLKNIKNWHKKYCWQFLKRKNKNSQKKEYQYFCGTPSINTIANSYFYKKDKYSAEKSEQNIKRKLIRDLMPSVLENKNIPEYIEKHFIEKASNPVVLNNIQWKTILSIACSIYKGNHLYYDENKKEEDCLMSVDENCKDRNYLYGRLLAVIDDAEKSALLKQNKENSNAKETIRSTNAQRLMRQFSIKPFETWKFLYEKFNDAYKKRLSGDWIDKRIADIKDKFTSIEEFENNLKLTGLYLLGYFHQLKTIENERGAAIQNKNKKEKEFSNDTAK
>NZ_AP017459.1|WP_096526004.1|321641_322376_+|type-I-C-CRISPR-associated-protein-Cas5
MPKNAIEFKVYGKYALFTDPITKLGGEKCSYQIPTYEAIKGITESIYWKPTFIWIIDKVRVMKSIEMEAKGVRTLKYHGVVGLYYYTYLRDVEYQVQAHFEWNVNESNLIQDRIDGKHFAIANRSLENGGRRDIFIGTRECQGYVEPCKFGEGDSDYDNNNLLSFGSMFYNFGYPNETGKKELITRIWLDANMKKGTVDFNDKKNNIKERIVKPMQQENQYVLDKNILKVNTEYENIFGNMEVK
>NZ_AP017459.1|WP_096525434.1|319195_321640_+|CRISPR-associated-helicase/endonuclease-Cas3
MISEKQPLLFYAHLSKSKDDKNKRQELNTHLTEVAEMSQKNASKIGMRNIGYCLGLLHDLGKYSELYQDYLLGERGDISRGDIDHSTAGAQYFNEFIKASMQDDNKLKNFLSEQIELCCVSHHSGLIDMIDIRGKNNFDKRLNKKYYYKETVSIEDIKKNIEKDVVDKINNIANNDLLYEIEQIKSKIDKNSKNEIYRTFSYGMLARFLLSCLIDADHTNSADFERGKKIKNKLVDWNIISEKLEKAIDELNDKNKSSENIKEIRKQISDDCAIAGQTYQKGCYKLEVPTGGGKTLASFRFAVEMAKKCNAGIDRIIYCIPFTTIIEQNANTIRKIVEADKSDKGNIVLEHHSNISQTSYDKGKEEEFNPTELYMQSWDIPIIFTTNVQILEVLFGRRTSDTRKLHQLANSIIIFDEVQSLPIKCVHLFNNAINYLVDFCNTTVVLCTATQPLLDNVDPERGCLKLSEKPDIIQNRNCVFDSLKRVEVKPEIKDVDYTSEEIASKAAEFVNDNENCLVICNTTKSAKEIFEIIKGRVDYEVYHLSARMMPIHRKIVLRAIKRKLNKRKKIAVVSTQVIEAGIDIDFNCGIRALAGLDSIIQAAGRINRNGTLKTNDGNNKKGKLYVYNFNENLGILDDIKRGKDTAEIILRRHPNADLLDNKIIKDYYDDFFYQKKQRKDMQFLICNENTELDLLSENCKYNGKYNLTLNQSFKEASNNFKVIDNIASPVCIEIKRVRKIIDKINSSFDSKERYKLIKKLHKYRVNIYPSQFKNSTAIKPISNDLDIYSISDCYYDKNFGITEEAALDKGGACV
>NZ_AP017459.1|WP_172412812.1|317902_318775_+|NAD(P)H-hydrate-dehydratase
MPFENTMKEKEIRSFASKLKRKPDSYKYNYGHVLVIAGSNTMPGSGILCCLGALRSGSGLVTYAVRDNFLDQACAISKPEVMFFVYRTATDILDFIKSRKVTSIVIGPGLKADNSVLCKFIKEIIYAVNIPVILDASGLACFNGIAGELKTTNAKLIITPHLGEFSKLLNIQSAVIENDRKKIVADFAEVNSLICVLKGSNTFVSCGKKNYKNNTGTPAMATAGSGDVLSGIISSFVNVTDDVFEAVTFAVFIHGLAGEIAEKDKGMTGVIASDIAENICYAIKQIMMKR
>NZ_AP017459.1|WP_096525433.1|317577_317913_+|holo-ACP-synthase
MNVGIDIEEVERFVKYVRDKKFLERIFAKEEISYSIPRKNAAQYLAARFAAKEAVWKALSTRNKKFTIADISVRNTKDGKPQVYIKNKKYKRIDISLSHTDKYVAAVAIAF
>NZ_AP017459.1|WP_096525432.1|315403_317233_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIFGYIGKKNAVDIIFKGLEKLEYRGYDSAGIAVVIDKELCIRRSVGKLCNLGLSLKENPISANIGIGHTRWATHGSPSKENAHPHTDTAKTVVIVHNGIIENYVELKAELQKDGYEFKSETDTEVIAHLIKKYCKGNLFCAVQKTLSRVKGSYALGIVSKDEYDKIICARKDASLIIGVGVGENFMASDIPALLPYTRDMIFLENGDIAEITAEKVVVKNIKGDIINREIKNIRWDTVQAEKDGYKHFMLKEIFEQPRTIEDTFRGRIYPDEGRVYIEEVKLKEEYIKNISNIYIVACGTSYHSGLVSKFLFESFAKIPTEVDIASEFRYRDVILDEKTLVVVISQSGETADTLAALRLAKSKGCQTLAVCNVVGSSISREAMYVIYTHCGPEIGVASTKAFTGQVTALYVLALDWAYKREALTIKELKKYLKELWEIPLKINEFLKNAESVHDIAKVFANKRDFLYLGRHINYPVALEGALKIKEISYIHAEGYAAGEMKHGPIALIDKSMPIVAIVIKGRIYEKIISNIEEAKARGGTIIAVADQSDKEIGNKSNYVIYVPETDEFVSPLMTVIPLQLLAYYISLILGCDVDQPRNLAKSVTVE
>NZ_AP017459.1|WP_096525440.1|335954_337172_-|MiaB/RimO-family-radical-SAM-methylthiotransferase
MKKYYIHTFGCKVNQYESQLISEKFRKDNFECTQKPEEADIIIFNSCTVTADADKKLEYFLRKATKLPNRPKIMLTGCIVKNKNIDIKNLFPDIEIIKDKTKLFIEPQKQKVSGFDRHSRAFLKIQDGCKSFCSYCIVPYVRSTLWSKPENEVLSEIKNLVKSGYSEIVLTGIHTGKYDGGLSDLLEKIIKIPLAFRVRISSVELNEIDDKFIELIETNAEKICRHLHVPLQSGSDEILKQMNRNYSTKEFEKKVSKIMRILPDLALTTDIITGFPGETEKHHKETCDFVKQILFARFHIFRYSYRQETKASTFGNKVPTIEIKSRSKDIFEIDSIKRKDFLNKNIGTKRKAVKTGKNKLLTDNYITVKQQTEAWNVECGIMKASGNKKKQSGIFEVEITDTSEI
>NZ_AP017459.1|WP_096525442.1|337390_337597_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MKSHLLILKTSFSKNKSERYKKISVAASSQCERNDIMKINEPLDFKTACKNAAADKKSINILSLRKRK
>NZ_AP017459.1|WP_172412813.1|337550_337694_-|hypothetical-protein
MSSLHKMSDFIVKASQRRQFEWLIEKHAEIEVSEIAPVNTKNQFFKK
>NZ_AP017459.1|WP_015423092.1|338849_340049_+|elongation-factor-Tu
MGKEKFERSKPHVNIGTIGHVDHGKTTLTAAITKVLGDKGLAKYISYDEVARASESQGRRDASKIVTIAVSHVEYSTVNRHYAHIDCPGHADYVKNMITGAAQMDGAILVVSALDGPMPQTREHILLARQVNVPAVVVFLNKCDAVEDKELLDLVEMEVRDLLTKYNFPGESTPIIRGSALGALEGKQDGVDSIMSLMEAVDNTIPLPARDVDKPFLMSVEDVFSITGRGTVATGRVEKGRVRVGENVDIVGIQETRKSVVTGIEMFRKLLDEAQAGDNIGMLLRGIEKNQVERGQVIAYPGSIKPHKKFRGQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGIAHLPEGVEMVIPGDNVTMDIELIMPVAMETQLRFAIREGGKTVGSGVVTEIVE
>NZ_AP017459.1|WP_015423238.1|340551_340704_+|50S-ribosomal-protein-L33
MAERVIITLACSVCKNRNYYFDRAKNHEGKLALKKFCKNCGKRTDHKETK
>NZ_AP017459.1|WP_096525443.1|340815_341004_+|preprotein-translocase-subunit-SecE
MNLIRTFIQFFKESYYELTKVTWLGKKEVVGTTIIVIIFVIIMSIFVSVVDLFLGTVVGIIL
>NZ_AP017459.1|WP_015423240.1|341016_341547_+|transcription-termination/antitermination-factor-NusG
MANQWYVVHVYSGHEYKVKKGLEMTVANLNMQDTISQILVPTEEVIEVKQNKKKIKKRKFYPGYIFVEMTINNSTYWLIRNTAGVTGFLGGVKPIPISQFEVENILNTVANPDTSKPRPAVSFEKEENIRIIEGPFKHFIGIVEEVNHERGKLRVMVTIFGRHTPVELGFLQVEKM
>NZ_AP017459.1|WP_015423241.1|341618_342053_+|50S-ribosomal-protein-L11
MPPKKIKAMIKLQIPAGGANPSPPVGPALGQQGVNIMDFCKQFNERTKSMEQGMTIPAVITVFEDRSFTFITKIPPVPVLIKKAAGVAKASGVPNRNKAGKITATQVEEIAKQKMPDLNANGDLNAAKLMIEGTARSMGIDIVK
>NZ_AP017459.1|WP_015423242.1|342155_342839_+|50S-ribosomal-protein-L1
MGKRLSEASKLVDKNMVYKLTEAVILVKETAKAKFDETIEIHIKLGIDPKRSDQMVRGTISIPHGIGRTRKIAVLAKGEKQKEAEAAGADIIGSDDLIEDISKGKLGSGFDVLVATPDVMKDLSRVAKILGPKGLMPNPKSGTVTFEIGKTVEELKKGRVEYKNDSFGIIHVPVGKASFEKEKLENNIKTLLEAVAKAKPLSSKGQYIKSISISSTMGPGIFVEQKI
>NZ_AP017459.1|WP_096525444.1|342917_343373_+|ribosome-maturation-factor-RimP
MRKVQEIEDLLAPVAAREKIEIVDVQYSKKAGDWVARIFIDKDSGVTISDCENISCIFGAFLDESDILKDSHVLEISSPGFKRVLKSEKSFRRFIGSKTRIRTFKPINNQRNFLGTLLNFDDGRIKINDVTNGVVEIEFSDIRKANIEADI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP017459_1	1.1\|42286\|30\|NZ_AP017459\|CRISPRCasFinder	42286-42315	30	NZ_AP017459.1	94847-94876	0	1.0

1. spacer 1.1|42286|30|NZ_AP017459|CRISPRCasFinder matches to position: 94847-94876, mismatch: 0, identity: 1.0

cttttataccaagatctatcgcgtcatcaa	CRISPR spacer
cttttataccaagatctatcgcgtcatcaa	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP017459_3	3.71\|332015\|33\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	332015-332047	33	MK765620	Tortoise microvirus 68 isolate 68_SP_146, complete genome	224-256	5	0.848
NZ_AP017459_3	3.71\|332015\|33\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	332015-332047	33	MH572461	Microviridae sp. isolate SD_MC_53, complete genome	203-235	6	0.818
NZ_AP017459_3	3.25\|328974\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	328974-329007	34	NC_004629	Pseudomonas phage phiKZ, complete genome	126463-126496	7	0.794
NZ_AP017459_3	3.45\|330293\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330293-330326	34	MN694028	Marine virus AFVG_250M137, complete genome	27363-27396	7	0.794
NZ_AP017459_3	3.82\|332741\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	332741-332774	34	AP014858	Vibrio phage RYC DNA, complete sequence	157432-157465	7	0.794
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP037431	Lactobacillus plantarum strain EM plasmid pEM2, complete sequence	3043-3076	7	0.794
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP018212	Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence	45850-45883	7	0.794
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP035145	Lactobacillus plantarum strain SRCM103357 plasmid unnamed2	19122-19155	7	0.794
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	KX229736	Campylobacter phage PC5, complete genome	79654-79688	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	KX879627	Campylobacter phage vB_CjeM_Los1, complete genome	19007-19041	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	NC_042112	Campylobacter phage CP81, complete genome	109143-109177	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	MH107028	Campylobacter phage CP39, partial genome	87524-87558	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	NC_015464	Campylobacter phage NCTC12673, complete genome	66921-66955	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	KF148616	Campylobacter phage CP8, complete genome	19532-19566	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	NC_016562	Campylobacter phage CPX, complete genome	19298-19332	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	KX236333	Campylobacter phage PC14, complete genome	101914-101948	7	0.8
NZ_AP017459_3	3.126\|335644\|35\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335644-335678	35	JX569801	Campylobacter phage CP30A, complete genome	68613-68647	7	0.8
NZ_AP017459_1	1.1\|42286\|30\|NZ_AP017459\|CRISPRCasFinder	42286-42315	30	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	64846-64875	8	0.733
NZ_AP017459_3	3.47\|330425\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330425-330458	34	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	50176-50209	8	0.765
NZ_AP017459_3	3.71\|332015\|33\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	332015-332047	33	MH572320	Microviridae sp. isolate SD_SC_51, complete genome	218-250	8	0.758
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP028979	Lactobacillus plantarum strain LQ80 plasmid pLQ802, complete sequence	54809-54842	8	0.765
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP021933	Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence	35198-35231	8	0.765
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP031177	Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence	5228-5261	8	0.765
NZ_AP017459_3	3.105\|334262\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	334262-334295	34	NZ_CP028242	Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence	67137-67170	8	0.765
NZ_AP017459_3	3.115\|334921\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334921-334954	34	CP016947	Yersinia enterocolitica strain YE1 plasmid unnamed2, complete sequence	47815-47848	8	0.765
NZ_AP017459_3	3.115\|334921\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334921-334954	34	NZ_CP016942	Yersinia enterocolitica strain YE3 plasmid unnamed1, complete sequence	84647-84680	8	0.765
NZ_AP017459_3	3.115\|334921\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334921-334954	34	NZ_CP016938	Yersinia enterocolitica strain YE6 plasmid unnamed1, complete sequence	87253-87286	8	0.765
NZ_AP017459_3	3.115\|334921\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334921-334954	34	NZ_CP016934	Yersinia enterocolitica strain YE7 plasmid unnamed1, complete sequence	34528-34561	8	0.765
NZ_AP017459_3	3.115\|334921\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334921-334954	34	NZ_CP016941	Yersinia enterocolitica strain YE5 plasmid unnamed2, complete sequence	47465-47498	8	0.765
NZ_AP017459_3	3.115\|334921\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334921-334954	34	NZ_CP016932	Yersinia enterocolitica strain YE165 plasmid unnamed1, complete sequence	40988-41021	8	0.765
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NC_017021	Rickettsia amblyommatis str. GAT-30V plasmid pMCE_3, complete sequence	20965-20997	8	0.758
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NZ_CP012422	Rickettsia amblyommatis strain Ac37 plasmid pRAMAC23, complete sequence	14148-14180	8	0.758
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NC_013937	Candidatus Rickettsia amblyommii AaR/SC plasmid pRAM23, complete sequence	14271-14303	8	0.758
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NZ_CP015015	Rickettsia amblyommatis isolate An13 plasmid unnamed_1, complete sequence	19894-19926	8	0.758
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NZ_CP040365	Bacillus flexus isolate 1-2-1 plasmid punnamed2, complete sequence	4685-4717	8	0.758
NZ_AP017459_3	3.128\|335777\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335777-335809	33	NZ_CP019084	Paludisphaera borealis strain PX4 plasmid PALBO2, complete sequence	23199-23231	8	0.758
NZ_AP017459_1	1.1\|42286\|30\|NZ_AP017459\|CRISPRCasFinder	42286-42315	30	NZ_AP017657	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence	41109-41138	9	0.7
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	AP014274	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C43, * SEQUENCING IN PROGRESS *	21170-21203	9	0.735
NZ_AP017459_3	3.37\|329763\|35\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329763-329797	35	KY921761	Bacillus phage BeachBum, complete genome	20852-20886	9	0.743
NZ_AP017459_3	3.37\|329763\|35\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329763-329797	35	KY821088	Bacillus phage Harambe, complete genome	21482-21516	9	0.743
NZ_AP017459_3	3.69\|331883\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	331883-331916	34	MN693687	Marine virus AFVG_250M95, complete genome	22727-22760	9	0.735
NZ_AP017459_3	3.69\|331883\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	331883-331916	34	MN693611	Marine virus AFVG_250M96, complete genome	22718-22751	9	0.735
NZ_AP017459_3	3.69\|331883\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	331883-331916	34	MN694746	Marine virus AFVG_250M97, complete genome	22738-22771	9	0.735
NZ_AP017459_3	3.69\|331883\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	331883-331916	34	MN694410	Marine virus AFVG_250M98, complete genome	15495-15528	9	0.735
NZ_AP017459_3	3.80\|332609\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	332609-332642	34	AP014106	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C34-MedDCM-OCT-S43-C23, * SEQUENCING IN PROGRESS *	16789-16822	9	0.735
NZ_AP017459_3	3.82\|332741\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	332741-332774	34	NZ_CP019039	Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence	33938-33971	9	0.735
NZ_AP017459_3	3.89\|333204\|32\|NZ_AP017459\|CRISPRCasFinder,CRT	333204-333235	32	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	420442-420473	9	0.719
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024110	Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence	74333-74366	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024106	Bacillus cytotoxicus strain CH_23 plasmid pCh23_67, complete sequence	19151-19184	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024118	Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence	620-653	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024103	Bacillus cytotoxicus strain CH_25 plasmid pCh25_67, complete sequence	56653-56686	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024108	Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence	30805-30838	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024100	Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence	10107-10140	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024122	Bacillus cytotoxicus strain CH_1 plasmid pCh1_67, complete sequence	16663-16696	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024115	Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence	17770-17803	9	0.735
NZ_AP017459_3	3.96\|333666\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333666-333699	34	NZ_CP024097	Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence	34965-34998	9	0.735
NZ_AP017459_3	3.102\|334063\|33\|NZ_AP017459\|CRISPRCasFinder,CRT	334063-334095	33	NC_048041	Vibrio phage vB_VpS_PG07, complete genome	8205-8237	9	0.727
NZ_AP017459_3	3.25\|328974\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	328974-329007	34	NZ_CP054145	Deefgea sp. D17 plasmid unnamed2, complete sequence	6585-6618	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	NZ_KT601170	Staphylococcus sciuri strain wo28-3 plasmid pwo28-3, complete sequence	9464-9497	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	MT119361	Enterococus phage vipetofem, complete genome	81926-81959	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	NZ_KX982169	Staphylococcus sciuri strain wo27-9 plasmid pWo27-9, complete sequence	49935-49968	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	NZ_KX982171	Staphylococcus sciuri strain wo28-1 plasmid pWo28-1, complete sequence	54243-54276	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	LT615366	Enterococcus phage VPE25 genome assembly, chromosome: VPE25	3362-3395	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	LT546029	Enterococcus phage VFW genome assembly, chromosome: VFW	3282-3315	10	0.706
NZ_AP017459_3	3.33\|329500\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	329500-329533	34	LT546030	Enterococcus phage VPE25 genome assembly, chromosome: I	3362-3395	10	0.706
NZ_AP017459_3	3.90\|333268\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333268-333301	34	MN693262	Marine virus AFVG_25M29, complete genome	47469-47502	10	0.706
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	72491-72523	10	0.697
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	MF153391	Escherichia phage ST2, complete genome	39095-39127	10	0.697
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	MN693594	Marine virus AFVG_25M65, complete genome	328-360	10	0.697
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	KY295895	Escherichia phage G AB-2017, complete genome	17560-17592	10	0.697
NZ_AP017459_3	3.5\|327654\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	327654-327687	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	17015-17048	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349320	Cyanophage S-RIM12 isolate RW_29_1109, complete genome	135551-135584	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349314	Cyanophage S-RIM12 isolate RW_07_1112, complete genome	135552-135585	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349316	Cyanophage S-RIM12 isolate RW_22_0110, complete genome	135554-135587	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349312	Cyanophage S-RIM12 isolate RW_04_0709, complete genome	135236-135269	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349315	Cyanophage S-RIM12 isolate RW_14_0101, complete genome	135246-135279	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349317	Cyanophage S-RIM12 isolate RW_25_0210, complete genome	135394-135427	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	NC_015285	Prochlorococcus phage Syn33, complete genome	135546-135579	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349309	Cyanophage S-RIM12 isolate Np_22_1112, complete genome	135389-135422	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349319	Cyanophage S-RIM12 isolate RW_28_1109, complete genome	134265-134298	11	0.676
NZ_AP017459_3	3.54\|330888\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	330888-330921	34	KX349307	Cyanophage S-RIM12 isolate Np_14_0310, complete genome	134271-134304	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010611	Phaeobacter inhibens strain P92 plasmid pP92_a, complete sequence	212839-212872	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010675	Phaeobacter gallaeciensis strain P75 plasmid pP75_b, complete sequence	145942-145975	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010791	Phaeobacter gallaeciensis strain P63 plasmid pP63_x_draft, complete sequence	145942-145975	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010631	Phaeobacter inhibens strain P78 plasmid pP78_b, complete sequence	145942-145975	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010716	Phaeobacter piscinae strain P18 plasmid pP18_a, complete sequence	212839-212872	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010638	Phaeobacter gallaeciensis strain P73 plasmid pP73_b, complete sequence	145942-145975	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP010662	Phaeobacter inhibens strain P74 plasmid pP74_a, complete sequence	212839-212872	11	0.676
NZ_AP017459_3	3.86\|333006\|34\|NZ_AP017459\|CRISPRCasFinder,CRT	333006-333039	34	NZ_CP014803	Salipiger profundus strain JLT2016 plasmid pTPRO7, complete sequence	67677-67710	11	0.676
NZ_AP017459_3	3.114\|334855\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334855-334888	34	NZ_CP020898	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence	207709-207742	11	0.676
NZ_AP017459_3	3.114\|334855\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334855-334888	34	NZ_CP013633	Rhizobium sp. N324 plasmid pRspN324c, complete sequence	350205-350238	11	0.676
NZ_AP017459_3	3.114\|334855\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334855-334888	34	NC_010996	Rhizobium etli CIAT 652 plasmid pB, complete sequence	340060-340093	11	0.676
NZ_AP017459_3	3.114\|334855\|34\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	334855-334888	34	NZ_CP017243	Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence	347789-347822	11	0.676
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NZ_CP029460	Clostridium novyi strain 150557 plasmid pCN2, complete sequence	9087-9119	11	0.667
NZ_AP017459_3	3.118\|335119\|33\|NZ_AP017459\|CRISPRCasFinder,CRT,PILER-CR	335119-335151	33	NZ_CP029460	Clostridium novyi strain 150557 plasmid pCN2, complete sequence	62619-62651	11	0.667
NZ_AP017459_3	3.66\|331684\|34\|NZ_AP017459\|PILER-CR,CRISPRCasFinder,CRT	331684-331717	34	HQ634193	Cyanophage P-RSM6 genomic sequence	138896-138929	12	0.647

1. spacer 3.71|332015|33|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MK765620 (Tortoise microvirus 68 isolate 68_SP_146, complete genome) position: , mismatch: 5, identity: 0.848

gattaggcacaaagaaaaaatgtgtgtatacat	CRISPR spacer
gattaggcacaaagaaaaaataagtgtcgagat	Protospacer
*********************. ****  * **

2. spacer 3.71|332015|33|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MH572461 (Microviridae sp. isolate SD_MC_53, complete genome) position: , mismatch: 6, identity: 0.818

gattaggcacaaagaaaaaatgtgtgtatacat	CRISPR spacer
gattaggcacaaagaagaaatgagtagtaacat	Protospacer
****************.***** **.   ****

3. spacer 3.25|328974|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 7, identity: 0.794

attagtttctaaatctttctgcagtgcttcaaat-	CRISPR spacer
gatagtttctaaatctttcttaagtgc-ccagata	Protospacer
. ******************  ***** .**.**

4. spacer 3.45|330293|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MN694028 (Marine virus AFVG_250M137, complete genome) position: , mismatch: 7, identity: 0.794

tttaaaggcattaaacttgtcaaattttgacata	CRISPR spacer
tctaaagtcattaaacttgtcaagttgtaaagta	Protospacer
*.***** ***************.** *.* .**

5. spacer 3.82|332741|34|NZ_AP017459|CRISPRCasFinder,CRT matches to AP014858 (Vibrio phage RYC DNA, complete sequence) position: , mismatch: 7, identity: 0.794

ttttaaaagtatccataaagatattctggaggat	CRISPR spacer
ttttaaaagtatacataaggatatgtatgaggct	Protospacer
************ *****.***** .  **** *

6. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP037431 (Lactobacillus plantarum strain EM plasmid pEM2, complete sequence) position: , mismatch: 7, identity: 0.794

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttgaat	Protospacer
*  * ** ************** *********

7. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP018212 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence) position: , mismatch: 7, identity: 0.794

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttgaat	Protospacer
*  * ** ************** *********

8. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP035145 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed2) position: , mismatch: 7, identity: 0.794

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttgaat	Protospacer
*  * ** ************** *********

9. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

10. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to KX879627 (Campylobacter phage vB_CjeM_Los1, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

11. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_042112 (Campylobacter phage CP81, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

12. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

13. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_015464 (Campylobacter phage NCTC12673, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

14. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to KF148616 (Campylobacter phage CP8, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

15. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_016562 (Campylobacter phage CPX, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

16. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to KX236333 (Campylobacter phage PC14, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

17. spacer 3.126|335644|35|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to JX569801 (Campylobacter phage CP30A, complete genome) position: , mismatch: 7, identity: 0.8

ttgacgaagtaattgttgataaatttgctgttgaa---	CRISPR spacer
gttacgatgtaattgttgataactttgc---tgaattt	Protospacer
 * **** ************** *****   ****

18. spacer 1.1|42286|30|NZ_AP017459|CRISPRCasFinder matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 8, identity: 0.733

cttttataccaagatctatcgcgtcatcaa	CRISPR spacer
cacgggcaccaagctctatcgcttcatcaa	Protospacer
* .  ..****** ******** *******

19. spacer 3.47|330425|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.765

ctgctgaatctgaagcaacgtatctaaataataa	CRISPR spacer
aagcttcttatgaagcaactaatctaaataataa	Protospacer
  ***   * *********  *************

20. spacer 3.71|332015|33|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MH572320 (Microviridae sp. isolate SD_SC_51, complete genome) position: , mismatch: 8, identity: 0.758

gattaggcacaaagaaaaaatgtgtgtatacat	CRISPR spacer
gattagggacaaagaaaaaatgagtatcaagga	Protospacer
******* ************** **.*  * .

21. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP028979 (Lactobacillus plantarum strain LQ80 plasmid pLQ802, complete sequence) position: , mismatch: 8, identity: 0.765

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttaaat	Protospacer
*  * ** ************** *******.*

22. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP021933 (Lactobacillus plantarum strain TMW 1.1478 plasmid pL11478-1, complete sequence) position: , mismatch: 8, identity: 0.765

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttaaat	Protospacer
*  * ** ************** *******.*

23. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP031177 (Lactobacillus brevis strain UCCLB556 plasmid pUCCLB556_C, complete sequence) position: , mismatch: 8, identity: 0.765

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttaaat	Protospacer
*  * ** ************** *******.*

24. spacer 3.105|334262|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP028242 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

tattttcgtagttgatatcgtgtttcagttgatg	CRISPR spacer
ttgtatcttagttgatatcgtggttcagttaaat	Protospacer
*  * ** ************** *******.*

25. spacer 3.115|334921|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to CP016947 (Yersinia enterocolitica strain YE1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

attccaattagtttcctttatatttgcctctgcc	CRISPR spacer
aataaatttagttttctttttatttgcctcttct	Protospacer
* *  * *******.**** *********** *.

26. spacer 3.115|334921|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016942 (Yersinia enterocolitica strain YE3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

attccaattagtttcctttatatttgcctctgcc	CRISPR spacer
aataaatttagttttctttttatttgcctcttct	Protospacer
* *  * *******.**** *********** *.

27. spacer 3.115|334921|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016938 (Yersinia enterocolitica strain YE6 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

attccaattagtttcctttatatttgcctctgcc	CRISPR spacer
aataaatttagttttctttttatttgcctcttct	Protospacer
* *  * *******.**** *********** *.

28. spacer 3.115|334921|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016934 (Yersinia enterocolitica strain YE7 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

attccaattagtttcctttatatttgcctctgcc	CRISPR spacer
aataaatttagttttctttttatttgcctcttct	Protospacer
* *  * *******.**** *********** *.

29. spacer 3.115|334921|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016941 (Yersinia enterocolitica strain YE5 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

attccaattagtttcctttatatttgcctctgcc	CRISPR spacer
aataaatttagttttctttttatttgcctcttct	Protospacer
* *  * *******.**** *********** *.

30. spacer 3.115|334921|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016932 (Yersinia enterocolitica strain YE165 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

attccaattagtttcctttatatttgcctctgcc	CRISPR spacer
aataaatttagttttctttttatttgcctcttct	Protospacer
* *  * *******.**** *********** *.

31. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_017021 (Rickettsia amblyommatis str. GAT-30V plasmid pMCE_3, complete sequence) position: , mismatch: 8, identity: 0.758

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tgaaacccttgacttttttataaaaatatgata	Protospacer
 ..  ************  *************

32. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012422 (Rickettsia amblyommatis strain Ac37 plasmid pRAMAC23, complete sequence) position: , mismatch: 8, identity: 0.758

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tgaaacccttgacttttttataaaaatatgata	Protospacer
 ..  ************  *************

33. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_013937 (Candidatus Rickettsia amblyommii AaR/SC plasmid pRAM23, complete sequence) position: , mismatch: 8, identity: 0.758

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tgaaacccttgacttttttataaaaatatgata	Protospacer
 ..  ************  *************

34. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015015 (Rickettsia amblyommatis isolate An13 plasmid unnamed_1, complete sequence) position: , mismatch: 8, identity: 0.758

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tgaaacccttgacttttttataaaaatatgata	Protospacer
 ..  ************  *************

35. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040365 (Bacillus flexus isolate 1-2-1 plasmid punnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tgttccagatgaattttaaataaaaaaatgatt	Protospacer
 . ***   *** ************* ******

36. spacer 3.128|335777|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019084 (Paludisphaera borealis strain PX4 plasmid PALBO2, complete sequence) position: , mismatch: 8, identity: 0.758

caatccctgatttacaaggctctcttccaactt	CRISPR spacer
caatccctgattttcacggctctcgtgaagttc	Protospacer
************* ** ******* *  *..*.

37. spacer 1.1|42286|30|NZ_AP017459|CRISPRCasFinder matches to NZ_AP017657 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence) position: , mismatch: 9, identity: 0.7

cttttataccaagatctatcgcgtcatcaa	CRISPR spacer
gaccggcaccaagctctatcgcttcatcaa	Protospacer
  .. ..****** ******** *******

38. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to AP014274 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S30-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
actcttcagctgtatattcaagatcagcagataa	Protospacer
 ************** *****.****.  .** .

39. spacer 3.37|329763|35|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KY921761 (Bacillus phage BeachBum, complete genome) position: , mismatch: 9, identity: 0.743

ttgacaaataaataataatatgcttatgtggtgta	CRISPR spacer
ttgacaaataaacaataatatactttcttgacaaa	Protospacer
************.********.*** . **... *

40. spacer 3.37|329763|35|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KY821088 (Bacillus phage Harambe, complete genome) position: , mismatch: 9, identity: 0.743

ttgacaaataaataataatatgcttatgtggtgta	CRISPR spacer
ttgacaaataaacaataatatactttcttgacaaa	Protospacer
************.********.*** . **... *

41. spacer 3.69|331883|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MN693687 (Marine virus AFVG_250M95, complete genome) position: , mismatch: 9, identity: 0.735

ccagatcgcttgatagccaaatggcacattatta	CRISPR spacer
agaatttacttgaaagccaaatgtcacattatca	Protospacer
  *. *..***** ********* ********.*

42. spacer 3.69|331883|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MN693611 (Marine virus AFVG_250M96, complete genome) position: , mismatch: 9, identity: 0.735

ccagatcgcttgatagccaaatggcacattatta	CRISPR spacer
agaatttacttgaaagccaaatgtcacattatca	Protospacer
  *. *..***** ********* ********.*

43. spacer 3.69|331883|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MN694746 (Marine virus AFVG_250M97, complete genome) position: , mismatch: 9, identity: 0.735

ccagatcgcttgatagccaaatggcacattatta	CRISPR spacer
agaatttacttgaaagccaaatgtcacattatca	Protospacer
  *. *..***** ********* ********.*

44. spacer 3.69|331883|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MN694410 (Marine virus AFVG_250M98, complete genome) position: , mismatch: 9, identity: 0.735

ccagatcgcttgatagccaaatggcacattatta	CRISPR spacer
agaatttacttgaaagccaaatgtcacattatca	Protospacer
  *. *..***** ********* ********.*

45. spacer 3.80|332609|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to AP014106 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C34-MedDCM-OCT-S43-C23, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

ctttcagaataatcagggatatttactatcaaaa	CRISPR spacer
atttctgaaaaatcagggatatttagccataaca	Protospacer
 **** *** *************** .  .** *

46. spacer 3.82|332741|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP019039 (Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttttaaaagtatccataaagatatt-------ctggaggat	CRISPR spacer
ttttaaaaatatccataaggatattgcttttcct-------	Protospacer
********.*********.******       **

47. spacer 3.89|333204|32|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

attccctgtgcctgtaagaaact-------tcgtgccag	CRISPR spacer
attccctgtgcgtataagaaactataaagatc-------	Protospacer
*********** *.*********       **

48. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024110 (Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

49. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024106 (Bacillus cytotoxicus strain CH_23 plasmid pCh23_67, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

50. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024118 (Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

51. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024103 (Bacillus cytotoxicus strain CH_25 plasmid pCh25_67, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

52. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024108 (Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

53. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024100 (Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

54. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024122 (Bacillus cytotoxicus strain CH_1 plasmid pCh1_67, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

55. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024115 (Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

56. spacer 3.96|333666|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP024097 (Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence) position: , mismatch: 9, identity: 0.735

cgctcaattacaatttaacgattatagattttcc	CRISPR spacer
tcctttttcgcaatttaatgattatatattttcc	Protospacer
. **.  *..********.******* *******

57. spacer 3.102|334063|33|NZ_AP017459|CRISPRCasFinder,CRT matches to NC_048041 (Vibrio phage vB_VpS_PG07, complete genome) position: , mismatch: 9, identity: 0.727

aactatgaatagatattccgacgaattgtttga	CRISPR spacer
gcctatgtataaatattccgacgaattagagaa	Protospacer
. ***** ***.***************.   .*

58. spacer 3.25|328974|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054145 (Deefgea sp. D17 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

attagtttctaaatctttctgcagtgcttcaaat	CRISPR spacer
ttgctcttttaaatctttctgcagtgctgcattc	Protospacer
 *   .**.******************* **  .

59. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT601170 (Staphylococcus sciuri strain wo28-3 plasmid pwo28-3, complete sequence) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
attgttgagctgtattttcaaattcaaaatgatc	Protospacer
 .* ** *************** *****  . *

60. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to MT119361 (Enterococus phage vipetofem, complete genome) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
gaagatgatgtgtatttacaaaaccaaacaattg	Protospacer
     * *  ******* *****.**********

61. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX982169 (Staphylococcus sciuri strain wo27-9 plasmid pWo27-9, complete sequence) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
attgttgagctgtattttcaaattcaaaatgatc	Protospacer
 .* ** *************** *****  . *

62. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX982171 (Staphylococcus sciuri strain wo28-1 plasmid pWo28-1, complete sequence) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
attgttgagctgtattttcaaattcaaaatgatc	Protospacer
 .* ** *************** *****  . *

63. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to LT615366 (Enterococcus phage VPE25 genome assembly, chromosome: VPE25) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
aaagatgatgtgtatttacaaaaccaaacaattg	Protospacer
     * *  ******* *****.**********

64. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to LT546029 (Enterococcus phage VFW genome assembly, chromosome: VFW) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
aaagatgatgtgtatttacaaaaccaaacaattg	Protospacer
     * *  ******* *****.**********

65. spacer 3.33|329500|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to LT546030 (Enterococcus phage VPE25 genome assembly, chromosome: I) position: , mismatch: 10, identity: 0.706

cctcttcagctgtattttcaaaatcaaacaattg	CRISPR spacer
aaagatgatgtgtatttacaaaaccaaacaattg	Protospacer
     * *  ******* *****.**********

66. spacer 3.90|333268|34|NZ_AP017459|CRISPRCasFinder,CRT matches to MN693262 (Marine virus AFVG_25M29, complete genome) position: , mismatch: 10, identity: 0.706

aagcccttgacaaataaataaaaatatgattgta	CRISPR spacer
agaaatttgacaagtaaataaaagtatgatataa	Protospacer
*..  .*******.*********.******   *

67. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 10, identity: 0.697

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
taaattattttacttttaaataataatatgata	Protospacer
 *. .. .** ************ ********

68. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to MF153391 (Escherichia phage ST2, complete genome) position: , mismatch: 10, identity: 0.697

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tcgaatagttgacttttcactaaaaatatgata	Protospacer
  *  .  ********* * ************

69. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to MN693594 (Marine virus AFVG_25M65, complete genome) position: , mismatch: 10, identity: 0.697

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
taactgatttgacattttaataaaaatatgata	Protospacer
 *...  .***** *** **************

70. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to KY295895 (Escherichia phage G AB-2017, complete genome) position: , mismatch: 10, identity: 0.697

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tcgaatagttgacttttcactaaaaatatgata	Protospacer
  *  .  ********* * ************

71. spacer 3.5|327654|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 11, identity: 0.676

gaagtatgctagtcttggtagttcaatgttcgga	CRISPR spacer
ttagtatactattcttggtagttcaaaaatgtat	Protospacer
  *****.*** ************** . *  .

72. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349320 (Cyanophage S-RIM12 isolate RW_29_1109, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

73. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349314 (Cyanophage S-RIM12 isolate RW_07_1112, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

74. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349316 (Cyanophage S-RIM12 isolate RW_22_0110, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

75. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349312 (Cyanophage S-RIM12 isolate RW_04_0709, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

76. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349315 (Cyanophage S-RIM12 isolate RW_14_0101, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

77. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349317 (Cyanophage S-RIM12 isolate RW_25_0210, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

78. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to NC_015285 (Prochlorococcus phage Syn33, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

79. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349309 (Cyanophage S-RIM12 isolate Np_22_1112, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

80. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349319 (Cyanophage S-RIM12 isolate RW_28_1109, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

81. spacer 3.54|330888|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to KX349307 (Cyanophage S-RIM12 isolate Np_14_0310, complete genome) position: , mismatch: 11, identity: 0.676

agaatgcagtttaatgtattgtgtgtccgttcct	CRISPR spacer
agtatccagtttaatgtattgtgtaatatcccga	Protospacer
** ** ******************. .  ..*

82. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010611 (Phaeobacter inhibens strain P92 plasmid pP92_a, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

83. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010675 (Phaeobacter gallaeciensis strain P75 plasmid pP75_b, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

84. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010791 (Phaeobacter gallaeciensis strain P63 plasmid pP63_x_draft, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

85. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010631 (Phaeobacter inhibens strain P78 plasmid pP78_b, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

86. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010716 (Phaeobacter piscinae strain P18 plasmid pP18_a, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

87. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010638 (Phaeobacter gallaeciensis strain P73 plasmid pP73_b, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

88. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP010662 (Phaeobacter inhibens strain P74 plasmid pP74_a, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

89. spacer 3.86|333006|34|NZ_AP017459|CRISPRCasFinder,CRT matches to NZ_CP014803 (Salipiger profundus strain JLT2016 plasmid pTPRO7, complete sequence) position: , mismatch: 11, identity: 0.676

tggtaccacggatgagcagcgcccgcaacagaaa	CRISPR spacer
tatctgtccgggtgagcagcgcccgccacagatc	Protospacer
*. .  . ***.************** *****

90. spacer 3.114|334855|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 11, identity: 0.676

cattaaaaacaactgttttatatactcctctgaa	CRISPR spacer
tcagcaaaacaactgttttatatgctgctgccca	Protospacer
.    ******************.** ** .  *

91. spacer 3.114|334855|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013633 (Rhizobium sp. N324 plasmid pRspN324c, complete sequence) position: , mismatch: 11, identity: 0.676

cattaaaaacaactgttttatatactcctctgaa	CRISPR spacer
tcagcaaaacaactgttttatatgctgctgccca	Protospacer
.    ******************.** ** .  *

92. spacer 3.114|334855|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 11, identity: 0.676

cattaaaaacaactgttttatatactcctctgaa	CRISPR spacer
tcagcaaaacaactgttttatatgctgctgccca	Protospacer
.    ******************.** ** .  *

93. spacer 3.114|334855|34|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017243 (Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence) position: , mismatch: 11, identity: 0.676

cattaaaaacaactgttttatatactcctctgaa	CRISPR spacer
tcagcaaaacaactgttttatatgctgctgccca	Protospacer
.    ******************.** ** .  *

94. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029460 (Clostridium novyi strain 150557 plasmid pCN2, complete sequence) position: , mismatch: 11, identity: 0.667

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tttattattttactttttaataaaaatatgata	Protospacer
    .. .** ****** **************

95. spacer 3.118|335119|33|NZ_AP017459|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029460 (Clostridium novyi strain 150557 plasmid pCN2, complete sequence) position: , mismatch: 11, identity: 0.667

aagtccccttgacttttaaataaaaatatgatt	CRISPR spacer
tttattattttactttttaataaaaatatgata	Protospacer
    .. .** ****** **************

96. spacer 3.66|331684|34|NZ_AP017459|PILER-CR,CRISPRCasFinder,CRT matches to HQ634193 (Cyanophage P-RSM6 genomic sequence) position: , mismatch: 12, identity: 0.647

cgcaaaagtgatattaactgttcctcttccgcca	CRISPR spacer
gtcaaaagtgttaataactgttcctcactatgtg	Protospacer
  ******** ** ************ ..   ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

757037 : 763055

Staphylococcus_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096525726.1\|757037_757709_-	FAD-dependent thymidylate synthase	K9MCR9	Sulfolobus_virus	2.2e-41	46.6
WP_096525727.1\|757718_759008_-	adenylosuccinate synthase	A0A285PX35	Cedratvirus	7.8e-64	35.2
WP_096525728.1\|759356_759818_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.9e-37	56.8
WP_096525729.1\|760001_761213_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-109	50.4
WP_096525730.1\|761244_761862_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-34	40.5
WP_096525731.1\|761987_763055_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.2e-40	33.4

DBSCAN-SWA_2

789821 : 801535

Pseudomonas_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096525748.1\|789821_790583_-	uracil-DNA glycosylase	A0A2I6PIA1	Pseudomonas_phage	9.1e-20	33.9
WP_096525749.1\|790530_791184_-	phosphopantothenoylcysteine decarboxylase	Q9HH70	Methanothermobacter_phage	6.2e-17	32.7
WP_015423560.1\|791183_791720_-	phosphopantothenoylcysteine decarboxylase	A0A1V0QGA1	Shearwaterpox_virus	3.8e-20	34.1
WP_145971075.1\|791752_791953_-	hypothetical protein	NA	NA	NA	NA
WP_158302820.1\|792007_792637_-	guanylate kinase	A0A240FAU9	Liberibacter_phage	9.8e-12	30.1
WP_096525750.1\|792882_793497_-	XTP/dITP diphosphatase	A0A0P0A1X5	Cassava_brown_streak_virus	3.7e-11	34.2
WP_096525751.1\|793738_796390_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.6e-159	40.7
WP_096525752.1\|796545_797247_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_096525753.1\|797312_798083_+	hypothetical protein	NA	NA	NA	NA
WP_096525754.1\|798109_798439_+	hypothetical protein	NA	NA	NA	NA
WP_015423566.1\|798925_801535_+	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	4.8e-121	36.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP017459

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection