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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP017900 Nocardia seriolae strain UTF1 4 crisprs cas3,WYL,DinG,RT,PD-DExK,DEDDh,cas14j,c2c9_V-U4,csa3,c2c10_CAS-V-U3 0 0 23 0

Results visualization

1. NZ_AP017900
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP017900_1 2175560-2175633 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP017900_2 2981920-2982001 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP017900_3 5261369-5261483 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP017900_4 6137688-6137788 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 85500 : 140848 52 Mycobacterium_phage(28.57%) tRNA,transposase,protease NA
DBSCAN-SWA_2 157576 : 168943 8 Macacine_betaherpesvirus(100.0%) NA NA
DBSCAN-SWA_3 251608 : 280694 27 Gordonia_phage(25.0%) integrase,transposase,tRNA attL 247303:247319|attR 281383:281399
DBSCAN-SWA_4 631549 : 664898 36 Actinoplanes_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_5 949791 : 1065854 86 Tupanvirus(41.67%) transposase,protease NA
DBSCAN-SWA_6 1313316 : 1401664 87 Mycobacterium_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_7 1930551 : 2062977 109 Mycobacterium_phage(21.05%) integrase,transposase attL 1948622:1948640|attR 1995859:1995877
DBSCAN-SWA_8 2066516 : 2119792 46 Bacillus_phage(40.0%) transposase,tRNA,protease NA
DBSCAN-SWA_9 2417051 : 2503689 59 Anoxybacillus_phage(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_10 2864325 : 2913467 54 Saccharomonospora_phage(25.0%) transposase NA
DBSCAN-SWA_11 3677222 : 3723435 44 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_12 4175447 : 4217408 32 Morganella_phage(33.33%) integrase,transposase attL 4176026:4176044|attR 4219974:4219992
DBSCAN-SWA_13 4248730 : 4288593 39 Bacillus_phage(20.0%) transposase NA
DBSCAN-SWA_14 4506936 : 4548464 47 Thermobifida_phage(25.0%) transposase NA
DBSCAN-SWA_15 5038610 : 5092175 53 Bacteriophage(50.0%) transposase NA
DBSCAN-SWA_16 5135083 : 5174356 40 Tsukamurella_phage(33.33%) transposase,protease NA
DBSCAN-SWA_17 5800940 : 5860210 56 Ostreococcus_lucimarinus_virus(33.33%) transposase NA
DBSCAN-SWA_18 6265483 : 6440918 155 Gordonia_phage(11.76%) integrase,transposase,tRNA,protease attL 6309960:6309986|attR 6313672:6313698
DBSCAN-SWA_19 6488047 : 6591736 77 Mycobacterium_phage(16.67%) integrase,transposase,protease attL 6486862:6486887|attR 6542509:6542525
DBSCAN-SWA_20 6742959 : 6809633 56 Catovirus(25.0%) transposase NA
DBSCAN-SWA_21 6903087 : 6970970 60 Pseudomonas_phage(25.0%) transposase NA
DBSCAN-SWA_22 7293683 : 7398381 57 Caulobacter_phage(16.67%) transposase,bacteriocin NA
DBSCAN-SWA_23 8003219 : 8061800 55 Acinetobacter_phage(16.67%) integrase,transposase attL 8023836:8023853|attR 8060889:8060906
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage