CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP018164	Mycobacterium shigaense strain JCM 32072	4 crisprs	csa3,cas3,WYL,cas4,DEDDh,DinG	1	1	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP018164_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018164_1

332464-332582

Orphan

Consensus_repeat	Method
TGAGCCGCCGCCGATGGCGGCAGGGCCTCCTGCGCCACCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018164_1

>merge|NZ_AP018164|1|332464-332582|CRISPRCasFinder
TGAGCCGCCGCCGATGGCGGCAGGGCCTCCTGCGCCACCGCCGATGGCTGGGCTTGAGCCGCCGCCGATGGCTGGGCTTGAGCCGCCGCCGATGGCGGCAGGGCCTCCTGCGCCACCGC

>NZ_AP018164|1|1|332464-332582|CRISPRCasFinder
TGAGCCGCCGCCGATGGCGGCAGGGCCTCCTGCGCCACCGC	CGATGGCTGGGCTTGAGCCGCCGCCGATGGCTGGGCT
TGAGCCGCCGCCGATGGCGGCAGGGCCTCCTGCGCCACCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018164.1\|WP_096436528.1\|339420_340149_+\|ZIP-family-metal-transporter	unknown	unknown	gnl\|CDD\|223505
NZ_AP018164.1\|WP_096436532.1\|342294_342960_-\|DUF427-domain-containing-protein	unknown	unknown	gnl\|CDD\|377265
NZ_AP018164.1\|WP_096443910.1\|336381_337263_+\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|224857
NZ_AP018164.1\|WP_096436508.1\|326337_327762_+\|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta	unknown	unknown	gnl\|CDD\|376743
NZ_AP018164.1\|WP_096436526.1\|337268_338189_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274680
NZ_AP018164.1\|WP_170063132.1\|332665_332818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096436504.1\|324922_326023_+\|Re/Si-specific-NAD(P)(+)-transhydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|240629
NZ_AP018164.1\|WP_096436520.1\|333838_334378_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP018164.1\|WP_096436522.1\|334431_335265_-\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|379298
NZ_AP018164.1\|WP_096443908.1\|328965_330066_+\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|226326
NZ_AP018164.1\|WP_096436518.1\|333315_333816_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_AP018164.1\|WP_096436506.1\|326023_326341_+\|NAD(P)-transhydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|378941
NZ_AP018164.1\|WP_096443906.1\|323032_324253_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173844
NZ_AP018164.1\|WP_096436510.1\|327819_327945_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096436512.1\|328121_328757_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_AP018164.1\|WP_096436514.1\|330082_330823_+\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|187600
NZ_AP018164.1\|WP_096436530.1\|340218_341922_-\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|235728
NZ_AP018164.1\|WP_096436502.1\|324386_324848_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_AP018164.1\|WP_096436516.1\|330844_332188_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_AP018164.1\|WP_096436524.1\|335284_336103_-\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882

Protein	Function_ID	Function_description	E-value
NZ_AP018164.1\|WP_096436528.1\|339420_340149_+\|ZIP-family-metal-transporter	gnl\|CDD\|223505	COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism].	8.62971e-11
NZ_AP018164.1\|WP_096436532.1\|342294_342960_-\|DUF427-domain-containing-protein	gnl\|CDD\|377265	pfam04248, NTP_transf_9, Domain of unknown function (DUF427). This domain contains a beta-tent fold.	3.02368e-30
NZ_AP018164.1\|WP_096443910.1\|336381_337263_+\|thioesterase-family-protein	gnl\|CDD\|224857	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism].	1.77161e-24
NZ_AP018164.1\|WP_096436508.1\|326337_327762_+\|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta	gnl\|CDD\|376743	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit. This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.	0
NZ_AP018164.1\|WP_096436526.1\|337268_338189_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	3.69276e-84
NZ_AP018164.1\|WP_096436522.1\|334431_335265_-\|thioesterase-family-protein	gnl\|CDD\|379298	pfam13622, 4HBT_3, Thioesterase-like superfamily. This family contains a wide variety of enzymes, principally thioesterases. These enzymes are part of the Hotdog fold superfamily.	1.03965e-33
NZ_AP018164.1\|WP_096436504.1\|324922_326023_+\|Re/Si-specific-NAD(P)(+)-transhydrogenase-subunit-alpha	gnl\|CDD\|240629	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains. Transhydrogenases found in bacterial and inner mitochondrial membranes link NAD(P)(H)-dependent redox reactions to proton translocation. The energy of the proton electrochemical gradient (delta-p), generated by the respiratory electron transport chain, is consumed by transhydrogenase in NAD(P)+ reduction. Transhydrogenase is likely involved in the regulation of the citric acid cycle. Rubrum transhydrogenase has 3 components, dI, dII, and dIII. dII spans the membrane while dI and dIII protrude on the cytoplasmic/matrix side. DI contains 2 domains in Rossmann-like folds, linked by a long alpha helix, and contains a NAD binding site. Two dI polypeptides (represented in this sub-family) spontaneously form a heterotrimer with dIII in the absence of dII. In the heterotrimer, both dI chains may bind NAD, but only one is well-ordered. dIII also binds a well-ordered NADP, but in a different orientation than a classical Rossmann domain.	0
NZ_AP018164.1\|WP_096436520.1\|333838_334378_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	5.34519e-13
NZ_AP018164.1\|WP_096436524.1\|335284_336103_-\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.40876e-51
NZ_AP018164.1\|WP_096443908.1\|328965_330066_+\|diacylglycerol-kinase	gnl\|CDD\|226326	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown].	6.0351e-105
NZ_AP018164.1\|WP_096436518.1\|333315_333816_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.53487e-10
NZ_AP018164.1\|WP_096436512.1\|328121_328757_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	2.93588e-21
NZ_AP018164.1\|WP_096443906.1\|323032_324253_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	0
NZ_AP018164.1\|WP_096436502.1\|324386_324848_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	2.17762e-93
NZ_AP018164.1\|WP_096436506.1\|326023_326341_+\|NAD(P)-transhydrogenase-subunit-alpha	gnl\|CDD\|378941	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch. PNTB_4TM is the region upstream of family PNTB, pfam02233, that carries four of this transporters transmembrane regions. PNTB is the beta-subunit of pyridine nucleotide transhydrogenase. This family forms part of the Proton-translocating Transhydrogenase (PTH) Family.	4.35734e-35
NZ_AP018164.1\|WP_096436514.1\|330082_330823_+\|glucose-1-dehydrogenase	gnl\|CDD\|187600	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.76284e-105
NZ_AP018164.1\|WP_096436530.1\|340218_341922_-\|FAD-dependent-monooxygenase	gnl\|CDD\|235728	PRK06184, PRK06184, hypothetical protein; Provisional.	8.54316e-101
NZ_AP018164.1\|WP_096436516.1\|330844_332188_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	8.82344e-100

>NZ_AP018164.1|WP_096436516.1|330844_332188_+|FAD-binding-oxidoreductase
MPLETLASIVGASHVITDPDVLAGRSVDHTGRYRGRARALVRPGDAEQVADVLRVCSAAGLNVTVQGGRTSLVAGTVPEHDDVLLSTERLTAIGDVDTVERRVEAGAGATLAAVQHAAGVAGLVFGVDLAARDTATVGGMASTNAGGLRTVRYGNMAEQVLGLQVALPDGSLMRRHSLVRSDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFADLEALIEAGRAFRDVDGIAALELIDGRAAALAAEHLGVGAPVQGDWLLLVELAADHDQTERLAELLDGARLCDEPAVGVDSAAQQRLWRIRESLAEVLGVYGPPLKFDVSLPLSAIGAFAREAAALIEARVSDAVPVLFGHVGEGNLHLNVLRVPVDEEKALYGPMMDLIAQCGGNVSSEHGVGSRKRAYLEMSREAADITVMRSVKAALDPTGYLNAAVLFD
>NZ_AP018164.1|WP_096436514.1|330082_330823_+|glucose-1-dehydrogenase
MGRVDGKVALISGGAGGMGAEDARLLVEEGAKVVIGDILDDQGKALADEIGDSARYVHLDVTQPDQWDAAVATAIGEFGKLNVLVNNAGTVALGPLKSFDLAKWQKVIDVNLTGTFLGMRASVEPMIAAGGGSIINVSSIEGLRGAPMVHPYVASKWGVRGLAKSAALELAPHNIRVNSVHPGFIRTPMTAHLPEDMVTIPLGRPGEVREVATFVLFLASDESSYSTGSEFIMDGGLITDVNHKEF
>NZ_AP018164.1|WP_096443908.1|328965_330066_+|diacylglycerol-kinase
MAIRVAHVGTGNVGRLALAELVTNPQFELTGVCVSTPEKVGKDAGELCGIGLDVPVETGVKAVNDLDTLLATKPECVVYCAMGDTRLPDAMADVMRILAAGVNVVGSSPGLLQFPWGVMPDKYIGRVEDAAKQGNSSIFISGVDPGFANDLLAFALAGTCQRIEQVRCMELHDYASYDGEEVMSYMGFARPMDEIPMLLQPGILSIAWGTAIRQLAAGLGIEVDEIAESYQREPAPEDFDIAIGRVAKGTVAVLQFEIRGMVKGHPAIVIEHVTRLRPDLRPDLPRPASGDGSYRIEITGEPSYAVDIIPSSRKGDHNHAAIAGAAGRIVNAIPDVIAAPQGIRTTLDLPLVTGKGLYAPSTLVTT
>NZ_AP018164.1|WP_096436512.1|328121_328757_+|TetR/AcrR-family-transcriptional-regulator
MSSESSTANGLTRREELLAVATKLFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLAAVHDDPSWTAREALYQYTVRLLTGIAADPERAAVYFQEQPYITEWFTDEQVAEVREKEAQVYHHVHGLIDRGIASGEFYECDSHVLALGYIGMTLGSYRWLRPSGRRSAKEIAAEFSTALLRGLIRDEGVRTTSPLGP
>NZ_AP018164.1|WP_096436510.1|327819_327945_-|hypothetical-protein
MDPSPDYDGSDEIEFFMRYLTWGLRGVEDGHGYPPPAYPPV
>NZ_AP018164.1|WP_096436508.1|326337_327762_+|NAD(P)(+)-transhydrogenase-(Re/Si-specific)-subunit-beta
MNYLVTTLYIISFALFIYGLMGLTGPKTAVRGNLIAAVGMVIAVGATLIKIRHTESWVLIIAGLVVGVLLGVPPARLTKMTAMPQLVAFFNGVGGGTVALIALAEFIETKGFSAFQHGESPTVHIVVASLFAAIIGSISFWGSIIAFGKLQEIISGSPIGFGRAQQPINLLLLVAAVAAAVVIGLHAHPGTGGAPLWWMIGLLVAAGVLGLMVVLPIGGADMPVVISLLNAMTGLSAAAAGLALNNTAMIVAGMIVGASGSILTNLMAKAMNRSIPAIVAGGFGGGGVAPSGGDGGDKTVKATSAADAAIQMAYANQVIVVPGYGLAVAQAQHAVKDMASLLESKGVTVKYAIHPVAGRMPGHMNVLLAEAEVDYDAMKDMDDINDEFARTDVAIVIGANDVTNPAARNDASSPIYGMPILNVDKAKSVIVLKRSMNSGFAGIDNPLFYGEGTSMLFGDAKKSVTEVAEELKAL
>NZ_AP018164.1|WP_096436506.1|326023_326341_+|NAD(P)-transhydrogenase-subunit-alpha
MYDELLANLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEVEHPSLAVQIILFVAVVFGTLNVIGGFIVTDRMLGMFKGKKPAKADEVAK
>NZ_AP018164.1|WP_096436504.1|324922_326023_+|Re/Si-specific-NAD(P)(+)-transhydrogenase-subunit-alpha
MTEPQANAIRVGVVAESGTDERRVALVPKAVASLVNSGVAVVVESGAGERALLPDELYTQAGATIGDAWSADVVVKVAPPTADEVGKLHSGQTLIGFLAPRNAENVIGALTQAGVQAFALEAIPRISRAQAMDALSSQGNVSGYKAVLLAASESTRFFPMLTTAAGTVKPATVLVLGVGVAGLQALATAKRLGARTTGYDVRPEVADQVRSVGAQWLDIGIDAAGEGGYARELTESERAQQQQALEKAISGFDVVITTALVPGRPAPRLVTAAAVQAMKPGSVVVDLAGETGGNCELTEPGRTVVKHDVTIASPFNLPATMPEHASELYSKNITALLDLLIADGKLAPDFDDEVVAESCVTRGKDS
>NZ_AP018164.1|WP_096436502.1|324386_324848_+|nuclear-transport-factor-2-family-protein
MTESRPPFPPFTHETAIQKVQAAEDSWNTRDPEKVSLAYTPDSQWRNRSEHVVGRAEIVAFLTRKWRRELDYVLRKSLWDFHDNRIAVRFQYECHDATGQWYRSYGNELWEFAPSGLMARREASINDVPIEESERRYFGPRPAAEHGQDIPLW
>NZ_AP018164.1|WP_096443906.1|323032_324253_-|acyl-CoA-dehydrogenase-family-protein
MSAKASDYHQRLSDFMTEYVFPAEAEYDKYRDEAGPHDHTVPPIVEELKIKARAQGLWNLFLPAESGLTNLEYAPLAEITGWSLEIAPEALNCAAPDTGNMETLHLFATEEQRKQWLEPLLAGEIRSGFSMTEPAVASSDARNIETSIVRDGGDYVINGRKWWTSGASDPRCKILIVMGRTNPEAASHQQQSMVLVPIDTPGVTVVRSTTVFGFQDQPGHCEIIYDNVRVPVTNLLGEEGGGFAIAQARLGPGRIHHCMRALGGSERALALMVDRASKRVAFGRPLAEQGVVREQIAKSRNEIDQARLLCEKAAWTIDQHGNKAAHTLVSQIKAVAPQVACNVIDRAIQVHGAAGVSEDTALARMYAWHRAMRLFDGPDEVHMRTIARAELGRERSALAAAVTAHD
>NZ_AP018164.1|WP_170063132.1|332665_332818_-|hypothetical-protein
MAASASALGAMDTAYAGNADTSGNGGARQTRHPGNGGARQTRHPGNGGAR
>NZ_AP018164.1|WP_096436518.1|333315_333816_+|MarR-family-transcriptional-regulator
MVVKSDVEAPQTDFGEALRVAWWSYSQRIDAELAAIGLPGREFPLNYVFALYGHPGPMTISEMGRQFAISRQAASKITAELGRRGYIRVAASRTDQREKVVELTAKAVELVTARRSAAAALDGEICERLGSAGLTELQRAMETVGEVSMGKKRVDFGNTYRSPKLW
>NZ_AP018164.1|WP_096436520.1|333838_334378_-|TetR/AcrR-family-transcriptional-regulator
MSNPLTAETDGSTPQRILAATAEVLGRNGKSKLSLSEVAAQAGVSRPTLYRWFASKEELLSAFSAYERQVFESGLAKATAGLKGIDKLDAVLRFIVEYQHSYSGVRMVDVEPEHTIAAFAHVIPQMRDGLQRHLPGPNAAVKAATVIRIAISHYIVRSDDGEQFLAQLRHAVGIKPTVD
>NZ_AP018164.1|WP_096436522.1|334431_335265_-|thioesterase-family-protein
MTDSYYELIDPPGGLADALGEKFRATDLARGTWSAAIQHGGPVSALLVRALERCERRDDTRLSRVVIDLLGGVPSDGDLWVRSEVQRRGKQIELVTAEMLATGPDGEPRPVARASGWRLQLQDTQAIAHAAAELPRPRAEARNRNLKAKEWDRNYVHSLQWLWLTEPLTPGPGESWIKPEVDLVQGETMTQLERLFAVADCANGIGSKLDITKWTFLNTDLAVHVFRVPDGEWVGIRAETSYGPDGIGTTIGTLYDEQGAVGAIQQSVLVRRRPPRA
>NZ_AP018164.1|WP_096436524.1|335284_336103_-|SMP-30/gluconolactonase/LRE-family-protein
MIPEPLANGFCFGEGPRWFEGLLWFSDMLGEAVHTSTLSGSLTTLPLPGRSPSGLGFRPDGSLLIASSEDRQVLRYDGETVVPIADLSGLAPTNLGDMVVDDRGRAYIGSQARSGGVIIRLDPDDTARIVASDLDFPNGMVITDDRTTLIVAESVGRRLTAFTIDNDSALRDRRVFADDLDGPPDGIALDADGAVWTSMTLAHQFERIVEGGTVTDRIDMGERVAIACALGGPERRILFLLSSTDAYPQRLVGTRGSRLDAVQVAMPGAGLP
>NZ_AP018164.1|WP_096443910.1|336381_337263_+|thioesterase-family-protein
MTTESEQTEWTVQGLLDLFDVQEDGQDRFTGETGIAVGDERQVVEGTQVLAQAIVAVAKRFPDKSVRSAHAVFSRAVTVGPLVELILDVVSDGRSTATAVVAVHQNGRRCLSITVLADVPTADVIRHHLPRPDVAPPAQANHSPMPMIGRELRLVDVVDVNSPDEVGPPELYAWLRYDPIPERDDLAKALLAYFTGHLGISTTMRAHEGIGTAQAHLTVSTAPMSISVAFHEPVHWTGWLLYTHESTQVGAGMSYVRGAVHSEEGELLASFTQEALIRPLRTSDTAIDSRARF
>NZ_AP018164.1|WP_096436526.1|337268_338189_+|LLM-class-F420-dependent-oxidoreductase
MHFTITHPMHSHPYNPELVSGAGIGKVAAAAEAAGIHGFGFTDHPAPSQRWLDAGGHDALDPFVALGFAAATTTTLRLIPNIVVLPYRNPFVVAKSGATLDLLSGGRFTLAVGVGYLKREFAALGVSYDQRAELFEESLQVIRAVWTGDDISFEGKHFSARGITAHPRPLSDPHPPIWIGGNTSASRQRVALYGDGWCPFPAPPQLAQTAGTASITSTEQLSAAVDDLRRRCDAADRDWSTIDITFTNFEGGSITDDDFNADAYLHGLAKLEKLGVTWVSVHLPGDSMAHALDTLERFRTLVVEAA
>NZ_AP018164.1|WP_096436528.1|339420_340149_+|ZIP-family-metal-transporter
MAVLVALGSFITTLLGGYSALRIGSYRNLVLGLAAGLMLGAVGFDLLPEALSPGFWVLWGIPTPLLAFVSGFLVLHIVERTVGIHLGQTSNDADVSDAPGVGLLAAAGLVGHSVMDGFAIGAAFQAGTGVGAVVAVAVIGHDFADGFNTYTITSLYGNDRRRALTLLAADAVAPVAGAALTLAVTIPHRVLDVYLGFFAGFLMYLASADVLPRAHTGRRTAATLACTVGAVLFMLAVVGLAS
>NZ_AP018164.1|WP_096436530.1|340218_341922_-|FAD-dependent-monooxygenase
MADERPGSIDVLVVGAGPVGLTLAAELQRYGATCRIVDRAPQPTDKSKAVIVHARMLEHFDHLELEQTFLARGTMVHSVSFFVQSKRVAQLDFVGTDTRYPFVLCIPQDVTENILGTRLADVGVHVERSVEFLDFDQDDGGVTSRLRHPDGSIEEVRTRYLVGCDGSRSTVRDKAGITFEGLAYEEEWILADVQLETDFFVRDEASLFVELRHFLAVFPLPGDRWRLIAVRKVADPTEAAAPATVEEFETVLLKHTRRAVRVFDPIWITPFRIGHKQADRLRVGRVFIAGDAAHIHSQVGGQGMNTGLQDAINLGWKLALSVRGQAEPRLLDTYEEERLPVIRSVLWGTDLATRAFTLRRKVDQQTLNTLGRFAIGLLPVHDYLTRSISQVGINYRARGYTSPAPADGARQRQWGRRPRLVAQPGDHAPRAPHLKLLPDSPTIRLYDLLRHNGHTVVFLQGKRQTDLAGDAVVDFARELRDVFGDELHFIGVRLRDTWKASTFGFPLVHDVAAEMHKAYGATTPTVIVIRPDCYIAFRSAWQDRNTLAPFLSAYLLSTESTASLEPT
>NZ_AP018164.1|WP_096436532.1|342294_342960_-|DUF427-domain-containing-protein
MTLVAGRGPLSSDPAGRFAPPIPAGAVYIEPHPRRIQALRGGRVVIDTEQALLVHRQGRPLSYIFPAYVVAGLPSEPEPEAPGHVHVPWDAVDTWLEEGRELVHYPPNPYHRVDCRPTKRRLRVDVAGATLVDTDDTVIVFETALEPRLYVDPALVHTDLLHRSETSSYCNYKGPATYWSTGDVDDVAWCYPDPLPESLPIKGFLSFDPTRVEILAELPNP

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Crispr_ID: NZ_AP018164_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018164_2

845080-845155

Orphan

Consensus_repeat	Method
CGGGGGTCATCGGCGCCGCTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018164_2

>merge|NZ_AP018164|2|845080-845155|CRISPRCasFinder
CGGGGGTCATCGGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGCCGGCGGGGTTCATCGGCGCCGCTCCT

>NZ_AP018164|2|2|845080-845155|CRISPRCasFinder
CGGGGGTCATCGGCGCCGCTCCT	CCTCATCGCTTCGCTCTGCATCGTCGCCGG
CGGGGTTCATCGGCGCCGCTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018164.1\|WP_096437313.1\|846539_846740_-\|ferredoxin	unknown	unknown	gnl\|CDD\|379145
NZ_AP018164.1\|WP_096437321.1\|849684_850407_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293833
NZ_AP018164.1\|WP_096437319.1\|848755_849589_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096437317.1\|847981_848677_-\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|235744
NZ_AP018164.1\|WP_096437293.1\|828814_831406_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_AP018164.1\|WP_096437303.1\|839748_842136_-\|lysylphosphatidylglycerol-synthetase-family-protein	unknown	unknown	gnl\|CDD\|377103
NZ_AP018164.1\|WP_096437295.1\|834071_835166_+\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_AP018164.1\|WP_096437327.1\|851737_852166_+\|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadB	unknown	unknown	gnl\|CDD\|184249
NZ_AP018164.1\|WP_096437301.1\|837118_839740_+\|glycoside-hydrolase-family-92-protein	unknown	unknown	gnl\|CDD\|226067
NZ_AP018164.1\|WP_096437329.1\|852179_852680_+\|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadC	unknown	unknown	gnl\|CDD\|139768
NZ_AP018164.1\|WP_096437307.1\|843277_843793_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380316
NZ_AP018164.1\|WP_096437305.1\|842297_843245_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|272862
NZ_AP018164.1\|WP_096437297.1\|835162_836284_+\|galactokinase	unknown	unknown	gnl\|CDD\|179063
NZ_AP018164.1\|WP_096444037.1\|831817_833983_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|379231
NZ_AP018164.1\|WP_096437325.1\|851271_851751_+\|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadA	unknown	unknown	gnl\|CDD\|237473
NZ_AP018164.1\|WP_096437315.1\|846834_847854_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132846
NZ_AP018164.1\|WP_096437291.1\|827373_828720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096437323.1\|850520_850721_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl\|CDD\|378324
NZ_AP018164.1\|WP_096437299.1\|836544_837030_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_003898538.1\|851046_851214_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|234783

Protein	Function_ID	Function_description	E-value
NZ_AP018164.1\|WP_096437313.1\|846539_846740_-\|ferredoxin	gnl\|CDD\|379145	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I. Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins.	5.26381e-10
NZ_AP018164.1\|WP_096437321.1\|849684_850407_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293833	cd16275, BaeB-like_MBL-fold, Bacillus amyloliquefaciens BaeB and related proteins; MBL-fold metallo hydrolase domain. Bacillus amyloliquefaciens BaeB may play a role in the synthesis of the antibiotic polyketide bacillaene. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	1.97195e-75
NZ_AP018164.1\|WP_003898538.1\|851046_851214_+\|50S-ribosomal-protein-L33	gnl\|CDD\|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	1.45053e-22
NZ_AP018164.1\|WP_096437317.1\|847981_848677_-\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|235744	PRK06213, PRK06213, crotonase/enoyl-CoA hydratase family protein.	3.33799e-113
NZ_AP018164.1\|WP_096437293.1\|828814_831406_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	8.06609e-64
NZ_AP018164.1\|WP_096437303.1\|839748_842136_-\|lysylphosphatidylglycerol-synthetase-family-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	3.66326e-24
NZ_AP018164.1\|WP_096437295.1\|834071_835166_+\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.22671e-126
NZ_AP018164.1\|WP_096437327.1\|851737_852166_+\|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadB	gnl\|CDD\|184249	PRK13693, PRK13693, (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional.	7.45791e-98
NZ_AP018164.1\|WP_096437301.1\|837118_839740_+\|glycoside-hydrolase-family-92-protein	gnl\|CDD\|226067	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism].	0
NZ_AP018164.1\|WP_096437329.1\|852179_852680_+\|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadC	gnl\|CDD\|139768	PRK13691, PRK13691, (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional.	7.60993e-105
NZ_AP018164.1\|WP_096437307.1\|843277_843793_+\|nitroreductase-family-protein	gnl\|CDD\|380316	cd02139, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	3.12726e-42
NZ_AP018164.1\|WP_096437305.1\|842297_843245_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|272862	TIGR00027, Hypothetical_protein_Rv0893c/MT0917/Mb0917c., methyltransferase, TIGR00027 family. This model represents a set of probable methyltransferases, about 300 amino acids long, with essentially full length homology. Members share an N-terminal region described by Pfam model pfam02409. Included are a paralogous family of 12 proteins in Mycobacterium tuberculosis, plus close homologs in related species, a family of 8 in the archaeon Methanosarcina acetivorans, and small numbers of members in other species, including plants. [Unknown function, Enzymes of unknown specificity].	1.43515e-92
NZ_AP018164.1\|WP_096437297.1\|835162_836284_+\|galactokinase	gnl\|CDD\|179063	PRK00555, PRK00555, galactokinase; Provisional.	0
NZ_AP018164.1\|WP_096444037.1\|831817_833983_-\|FUSC-family-protein	gnl\|CDD\|379231	pfam13515, FUSC_2, Fusaric acid resistance protein-like.	8.38967e-20
NZ_AP018164.1\|WP_096437325.1\|851271_851751_+\|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadA	gnl\|CDD\|237473	PRK13692, PRK13692, (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional.	3.59796e-101
NZ_AP018164.1\|WP_096437315.1\|846834_847854_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132846	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomonas. Even though VipD shows high sequence similarity with several functional regions of ExoU (e.g. oxyanion hole, active site serine, active site aspartate), it has been shown to have no phospholipase activity. This family includes ExoU from Pseudomonas aeruginosa and VipD of Legionella pneumophila.	3.63302e-61
NZ_AP018164.1\|WP_096437323.1\|850520_850721_+\|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl\|CDD\|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	1.01457e-09

>NZ_AP018164.1|WP_096437307.1|843277_843793_+|nitroreductase-family-protein
METWDAICARRNVREYTPDPVSRDDLNRIAEAGWRAPSAKNRQPWDFVVVTDKAQLQELSTVWRGAGHIAKAPAAIALVVPVPPDERRLVTDNYDVGQATMAMMLAATDLGVGTGHSSVGDQEKARAILGVPDDYLVAFLLGIGYPADRPLRVIRKPDRRPFDEVVHHGRW
>NZ_AP018164.1|WP_096437305.1|842297_843245_+|class-I-SAM-dependent-methyltransferase
MARTDNDSWEITESVGATALGVAASRAAETESDDPLIRDPFARVFLDAAGDGVWNWFAAPQLPAELLEAEPDLALQQQAMVGYMASRTAFFDSFFLDATTAGIRQVVILAAGLDARSWRLPWPHGTTVYELDQPRVLDFKASTLAEHGAEPACNRVAVPVDLRHDWPTALRQAGFDPAAPSAWSAEGLMPYLPAAAQELLFERIQQLSAVGSRVAVEALGPKFLDPELRAKRRARMDRVRAIMADADPQREIPSTDELWYFEEREDVGSWFGRHGWDVTVTPSVELMAGYGRKPPQQVEDQVPGNLFVAAQRSKS
>NZ_AP018164.1|WP_096437303.1|839748_842136_-|lysylphosphatidylglycerol-synthetase-family-protein
MRVDGRDISVSGSLLQPVTRRTNDILRLLLATAFLATVITSTVITHTRWIALEKSISGVVGVLTPTQSDVVYLVYGLAIVALPFMILIGLIVGRQWKTLGAYAAAALLAVLPLSISSNRIAAFRWHFDVSDRLSTLPAQFLDDPRWIAMLAAVLTVSGPWLPARWRRWWWTLLLAFVPIHLAISAIVPARSLVGLGVGWFVGALIVLVVGTPALEVPLEDAVRAMAKRGFVVSRLTVVRPAGPGALVLCTGPDESGTDGGRAQIELYGPHQRSGGALRELWRKLRLRDAETAPLQASMRRAVEHRALMTIAINDAGVANTETIAFAALDRGWTLYAHKPVRGTPLDECATTTPVQKVWEALHTLHGYRISHGDLRGNEITVDDGEVLFGGFGSAEYGATDAQLQSDIAQLLVTTSALYDAKSAVGAAIDAFGKDVILRASRRLTKSAVSKRIRRAVPDPRGTISSLRVEVKRQTGADEIKTEPITRFTRSQLIQLVLLGALVYVAYPFISTVPTFFSELRTANWWWALLGLAISASTYVGAAAALWASADETVSFWRLSIAQVANTFAATTTPAGVGGLALSTRYLQKGGGLSAMRATTAVALQQSVQVIMHLALLILFSAVAGVSTNLSHFVPDATVLYLIAGVALGIVGTFLFVPTLRRWLATDLRPKIKELADDLVEVAREPKRLGLIVLGCSGTTLGAALALWASIEAFGGGATFVTCTVVTMVGGTLASAAPTPGGVGAVEAALIGGLAAFGVPAAVGVPSVLLYRVLTCWLPVFVGWPVMRWLTENEMV
>NZ_AP018164.1|WP_096437301.1|837118_839740_+|glycoside-hydrolase-family-92-protein
MRSRKAPIALVAAMVVFATFIAAAPPTAYDGEPHLVTDPAAYVNTLIGTGTGGETVGEINNFPGATVPFGMVQYSPDTVGNYAGYSYSNPRSTGFSMTHASVGCAAFGDISMLPTTRSMGPQPWNAWERISHDDSEHGAPGYYTVRFPDTGVTAELTATTRTGVGRFSYPHNGLPALFHVRSGASLAGNSRAALQIGVDNTTITGWAGSGSFCDKKNTYTVYFAMRFSQPFTTFGTWDGYAIYPGTRDRDSPYSGGYVQFPAGSTVEVRTAISYVSIDAARANLAAEGAASFQDVRGAARSQWKAALARITVAGRNAGELRTFYTSLYRSLLHPNTFSDADGRYIGFDRQIHVVANGRTQYANFSDWDTYRCLAPLQALLFPEHASDMAQSLVNDAEQSGALPRWALANVATGEMSGDSVVPLIVNLYTYGATDFDTKAALHYMVEGATKGGVGLNGYVERPGIATYLRLGYAPNTPEFGTVDASITLEWSVDDFTISRFADALGDTATAAEFQQRAQYWQNLFNPTTRYISPRSGFGLFSGGTGFFRSPSGFGQEGYDEGNAEQYVWWVPHNVAGLVTALGGRQAVAARLHRFTKRLNDGPDEPYLWAGNEPDFAVPWLYNYVGQPWNTQQTVDRVRGLFGPTPNGAPGNDDLGALASWYVWAALGLYPSTPGVPILTLSTPIFDRIEISLPAGKSIRISAPGASGPRPLRYISGLRIDGQVTGHTWLPESIIRSGGDLTYSLAAHPDKAWGTSESDAPPSFGAQSSAVTANIANPVVSARPGSTAVTVDAQRMSDGAGGYTVNGTSDDVGITVAQVSGQFDKDGSAAIPVVITVAPTVREGYYLVHLTTTVGESMRRLTVLVSVDDDSGDS
>NZ_AP018164.1|WP_096437299.1|836544_837030_-|hypothetical-protein
MADQSYAVDAGHPPSALLKLINPILGFLLRTPLAGPSRKQLMVLSFTGRKTGRQFTIPVSAHVIDNDLYALTGAVWKANFRGGAPAQVVWDGRQTAMRGELIADRATVSDLYLRCAQSYGLRRAQVLVGLKFRDRRIPTLDEFSEAVDRMHLAAVRFTPTP
>NZ_AP018164.1|WP_096437297.1|835162_836284_+|galactokinase
MTVRYAAPGRINLIGEHTDYNLGFALPIALPQRTVVTFAPDDSDAITVRSDRARTAARIPVSTTPGEVSDWAGYVAGVIWALGRAGYPVPGGAMSITSDVQMGSGLSSSAALECAALGAIAAAAGTRIDRTEQARLAQRAENEYVGAPTGLLDQLSALFGAPSTALLIDFRDVTVDPVAFDPDAGDVALLLIDSRARHRHAGGEYAARRASCERAAADLGASSLREIQDRDLSALAAVEDPVDARRARHVLTENRRVLDFVAALRDADFGAAGRLMTASHASMRDDFAITTEHLDLLADTALRAGALGARMTGGGFGGCVIALVPTSRVDPVRESVRQATEKAGFAPPLITRTRAAAGAGPAAAPDTREHPFC
>NZ_AP018164.1|WP_096437295.1|834071_835166_+|galactose-1-phosphate-uridylyltransferase
MFDIVTAPTRAKLADGRDLLFFALPGHRPVPVPDRRPLPERDPDQSQLRFDRSTGQWVIIAARRQDRTYKPPADQCPLCPGPTGLTSEVPAPDYDVVVFENRFPSLCGAGRSLGAPDGDGFVSVPGHGRTEVICFSSNHTGSFAELAPAHAVLVVQAWRHRTADLLATPGIEQVFCFENRGEEIGVTLAHPHGQIYGYPYLTPRTAAMLGQAREHRIRHGHNLFADLLAREVADGSRIVARTELFTAFVPFAARWPVEVHIYPNRFVRNLVEFGDAELDAFARLYLDVLDRFDRLYSAPLPYISALHQFADTEAQADGYFHVELMSIRRSATKLKYLAASESAMDAFIGDVMPESVAQRLRDLA
>NZ_AP018164.1|WP_096444037.1|831817_833983_-|FUSC-family-protein
MIGSDPGLLRLRMATRTTASLGCSLAVLFLLTKATGQPLTVALLGVVITMIASRSVTEPDPRQQRITMALLPLPGALSVTLATLLAPHNIAADVVFVAVVFGAVYIRRFGPRGRALGMVAFMSYFFTLYLRASVSELPWLIVAIVVGTVCTFVMTAYVLPDRPEAVLRSTIRALRARMAIVVDTTAEAVRTGHLDGRRRRHMRARTIRLNETALMVQGQIEDKANPAMLYRGVTVEQLAPWLFDAELAIEWVATAGRRAAAAADNPAAIPARTRAELVTALSMLSRAIRVPEESGLQQAARQAQRVLDQPDPADGDAEGNAAVRRLALAIINAAKATAEVRAIVEGAAAGQPVESADTPPAPPEEKESQPGLRQTTRQAIQVSVAASLAIVTGELLAPARWYWAVIAAFVIFAGTNSWGETLTKGWQRLLGTMLGVPAGVLVATLFGGDKTASLVAIFVCLFCAFYFMTVTYSLMTFWITTMLALLYGLLGQFSFGVLMLRIEETAIGAVIGIAVAILVLPTRTQTTIRKDTKAFLTSLSDLIEISTATMFGGDEVVSPTEQARQLDRNLQQFRISAKPLLAGVAGLAGRRSIRRGLQIFTACDRYGRSLARTSEQYRDPVGAEALSDAFTSAAAQTRRNIDTLIAMVDGAKGGTVDSATDDLDAAECRARHRADGAEPDPDTRRFLTAVHALRQIERSTITAAINLGARDRTQVPAPTAS
>NZ_AP018164.1|WP_096437293.1|828814_831406_-|AAA-family-ATPase
MSATCRSCGTEALAADARFCHACGSALVSAAPSRHPPSDTPLVGRGWELNTLGGILDEAMRGAGCIVSLTGPAGIGKSRLARETAAVAAARGIPVFSSYCESHTCDIPFRTLAQLLRAALEIDQRPTEVARSVIRERFAAAESDDLLLLDDLVGLRDPSVPLPEVAPDARRRRLITLINTASLARSTPAVYVVEDAHWIDEASESLLTNLLAVLPHTPSLVLITYRPEYRGALSRISGAQVVALRPLSDTQASALTTQLLGADGSVTAVAAQVTQRAAGNPFFAEEIVRDFVERGVLHGRRGEYRSRVDLADVQVPATLQATIGARIDRLDATARRTLDAAAVIGLRFDADILTTLGGEADVSALLDAEVVDQVRFGSHPEYAFRHPLIRAVAYESQLKSDRSQLHRRLAEAIETTQTSADGNAALIAEHLEAAGDARGAFTWHMRAATWSRNRDFGAARARWQRAKALADRIPEHDRDRLSMRIAPRTLLCLTDFRVGRGGDDAEFAELRELCTAADDQRSLAIGMAGLIRARFRSSHVWEAAHLATELAALLDKIGDPTLTVSLSSAVLSAKHEAGDVTAVLRFARRVIDLAEGDLGQGKLTFAVPVPTAIAMRGLARSCLAMPGWQADFDQAMAYARTLDAFSFSGVSWYAYVTPLIYGVARPHAAMLRDTADTLAMAEQTGDDLGLDLARGARGIVLIHNGGSDRATGLALLVSVCEREGAWQRSFSSMLAITEAYVAREKARRGAIDEALESARHAVEHLTAAGSLMWNMPATAALVDVLLTRRLARDVAEAEAVIERWTSATCELGVTLHEIWSLRMRAQLARARKEESDFRDFRDRYRRKAADLGFEGHVALAAAM
>NZ_AP018164.1|WP_096437291.1|827373_828720_-|hypothetical-protein
MGRRYRRGKSRGGSVAVVASAVCLTLASCSETASPPPTTTATTSTSKPPTSTAPPPPSVTGPLEKDWKTYGGTAYFGCPDKFSLSKAALDDIRPKVFDTKTGQYVTPPVPAIPAGENVTGGVCALSGTVDDLKIVYVITTNKPAQALEPQTSKATAYAFDFKSGQQAATKELQPPTPDLKLADAKEWELVATSSGVAWLNAFTDGHRASPPRTVILSASDLSATWNDPRPARVWQDVLSFQRNNEPGKTSGAELRRPTGEPILQDNDIATVDGELSDGPDKLVKLTQRDPHDPVVVSTVFFDLNAKTPIKLGDSERVSGGGLSATLSNGKLFVDALNSDNSQFGFGVWNLRTQQWDLLKKRDDAKKLSIAKLAFFDDHVYITNDGGTFAVVALTATDPVATNWSVRPFSRISGWTLVCRSETAPQSAGQCKEIVLVQDQDGHYPGPWF
>NZ_AP018164.1|WP_096437313.1|846539_846740_-|ferredoxin
MRIVVDLNRCLGYAHCVPLAPEVLKLNGEEALTYDPNPDDRQRLRVLRAAAACPVQAIIVDKLDFE
>NZ_AP018164.1|WP_096437315.1|846834_847854_+|patatin-like-phospholipase-family-protein
MSKPVDLVLSGGGVKFIGLVGAVVALMDAGYVIRRVSGVSAGSIVAAVLAAGATDGQLTGAQVKELAFSVPLQKWRDAGPVPLLGAAWGLVRDTSMFRGDVAYDWIRGELANLGVNTFGDLILDEDHLVEGRRSKLVVTVADLTAAQLVRLPWDYRRLYGLDPDEQPVADAVRASIAIPFFYPPVRLKSRLGATATTLVDGGVLSNFPIDTFDRPDAKPPRWPTFGVTVLPRLTEGFSAVMPALKPLRFFEQTALLESLLTTMLTGHDQTHLNQPWVAARAIAVESTNVGVLDFDVSRDRLEELFDKGYEAAQEFLTTWDWAAYLERFRWQVDGRPKVK
>NZ_AP018164.1|WP_096437317.1|847981_848677_-|crotonase/enoyl-CoA-hydratase-family-protein
MSGPVTYTHLDSIAVIRMDDGKVNALGPTMQQALNDAIDHADGDNAGALVIAGNERVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLASGDHRVAAHAYNIQANEVAIGMTIPYAALEILKLRLTQSAYQQATGLAKSFFGETAVASGFVDEIVLPEMVLSRAEEAARGFAELHQHAHAATKLRARADALKALRAGIDGIESEFGL
>NZ_AP018164.1|WP_096437319.1|848755_849589_-|hypothetical-protein
MGWMQDGWHGVNNVEPSTWIAWAAWAAIALAIVTLVFANRQINRNRRLAAEQARPHVGMLMEPHAADWHVIELVVKNFGRTAAYNVHFSFANPPTVAEYENSTDGYADVAELQLPRELPVLAPGQEWRMVWDSALDRREIGTGIESRFTGTVIYYDRPETPRGWRFWERERQPLRTEVVLDWDALPPVQRIELMTTHDLAKREKQKLELLRSLLTYFHYASKETSPEVFRSEIERINKAVAETQDRWRTRQLDAPTDVRLRWSNAEDDLSKHRDQSV
>NZ_AP018164.1|WP_096437321.1|849684_850407_-|MBL-fold-metallo-hydrolase
MSDSSADRLYFRQLLSGRDFAAGDMVATQMRNFAYLIGDQQTGDCVVVDPAYAAGDLLDTLEADGMHLSGMLVTHHHPDHVGGSMMGFELKGLAELLERVDVPVHVNSHEALWVSRVTGIGVGDLTTHENHDKVSIGDIEIELLHTPGHTPGSQCFLLDGRLVAGDTLFLDGCGRTDFPGGDSDEMYRSLQQLAALPGNPTVFPGHWYSEEPSASLSDVKRSNYVYRAANLHQWRMLMGG
>NZ_AP018164.1|WP_096437323.1|850520_850721_+|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MLKKVEIELDDDLVQEAIRRFHVADAREAVHLALRNLLGKADEAGEVYDEFSDPSAWLPRRNGEAG
>NZ_AP018164.1|WP_003898538.1|851046_851214_+|50S-ribosomal-protein-L33
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKFCPNCGKHQAHRETR
>NZ_AP018164.1|WP_096437325.1|851271_851751_+|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadA
MSLAASIVGKHYRYPDYYVVEREKIREYAVAVQNDETYFFDEDAAAALGYKGLPAPLTFICVFGYKAQAAFFKYANIAIEDSQVVQVDQVLRFKKPIVAGDKLYCDVTVDSVRETHGTQIIVTKNIITNDAGEVVQETYTTLAGRAGENGEKGFSDGAA
>NZ_AP018164.1|WP_096437327.1|851737_852166_+|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadB
MALREFSSVKVGDQLPEKIYPLTRQDLVNYAGVSGDLNPIHWDDEIAKIVGLDTVIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKGAELVFSGKVKSVEPESKTVTIAISATTGGKKIFGRAIASAKLA
>NZ_AP018164.1|WP_096437329.1|852179_852680_+|(3R)-hydroxyacyl-ACP-dehydratase-subunit-HadC
MALKTDVRGMSWIYPDHFEVGREQLRAFARAAKYDNPAHFDEAAAAELGYDGLIAPLTFVSIFAKIIQDDFFRNVDVGMETMQIVQVDQQFVYHRPLLVGDKIFGRMDIESVNERFGADIVVTKNTCTNQDGEVVLLAYTTLMGHEGDDSIQLRWDKESGQVVRTA

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Crispr_ID: NZ_AP018164_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018164_3

1944836-1944922

Orphan

Consensus_repeat	Method
CCCGCTGCGCCCGGCTGCGCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018164_3

>merge|NZ_AP018164|3|1944836-1944922|CRISPRCasFinder
CCCGCCGCTCCCCGCTGCGCCCGGCTGCGCCGCGCTGGCGATCACCGCGCCTAATGCAGGTGGCCCGCTGCGCCCGGCTGCGCCGCG

>NZ_AP018164|3|3|1944836-1944922|CRISPRCasFinder
CCCGCCGCTCCCCGCTGCGCCCGG	CTGCGCCGCGCTGGCGATCACCGCGCCTAATGCAGGTGG
CCCGCTGCGCCCGGCTGCGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018164.1\|WP_096438984.1\|1947887_1948667_-\|pyrimidine-reductase-family-protein	unknown	unknown	gnl\|CDD\|184482
NZ_AP018164.1\|WP_096438978.1\|1944384_1944807_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|376583
NZ_AP018164.1\|WP_096438972.1\|1940633_1942010_+\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|237009
NZ_AP018164.1\|WP_096438964.1\|1934956_1935274_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371259
NZ_AP018164.1\|WP_096438968.1\|1936662_1937958_-\|ribonuclease-D	unknown	unknown	gnl\|CDD\|223426
NZ_AP018164.1\|WP_096444273.1\|1937959_1938595_-\|DUF3000-domain-containing-protein	unknown	unknown	gnl\|CDD\|378665
NZ_AP018164.1\|WP_096438982.1\|1946303_1947863_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|312032
NZ_AP018164.1\|WP_142404447.1\|1935270_1936494_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_AP018164.1\|WP_096438997.1\|1952445_1953387_+\|cytochrome-c-oxidase-assembly-protein	unknown	unknown	gnl\|CDD\|378238
NZ_AP018164.1\|WP_096438991.1\|1950965_1951313_+\|DUF732-domain-containing-protein	unknown	unknown	gnl\|CDD\|368380
NZ_AP018164.1\|WP_096438986.1\|1948665_1949754_+\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|281902
NZ_AP018164.1\|WP_096438974.1\|1942015_1942711_+\|chlorite-dismutase-family-protein	unknown	unknown	gnl\|CDD\|225792
NZ_AP018164.1\|WP_096438993.1\|1951320_1951932_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096444276.1\|1938716_1939523_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|235991
NZ_AP018164.1\|WP_096438990.1\|1950270_1950804_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096438988.1\|1949731_1950283_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018164.1\|WP_096438976.1\|1943871_1944363_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_AP018164.1\|WP_096438999.1\|1953401_1954535_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224732
NZ_AP018164.1\|WP_096438995.1\|1952020_1952389_+\|DUF732-domain-containing-protein	unknown	unknown	gnl\|CDD\|368380
NZ_AP018164.1\|WP_096438970.1\|1939587_1940637_+\|uroporphyrinogen-decarboxylase	unknown	unknown	gnl\|CDD\|234644

Protein	Function_ID	Function_description	E-value
NZ_AP018164.1\|WP_096438984.1\|1947887_1948667_-\|pyrimidine-reductase-family-protein	gnl\|CDD\|184482	PRK14059, PRK14059, pyrimidine reductase family protein.	4.8862e-116
NZ_AP018164.1\|WP_096438978.1\|1944384_1944807_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	1.09114e-74
NZ_AP018164.1\|WP_096438972.1\|1940633_1942010_+\|protoporphyrinogen-oxidase	gnl\|CDD\|237009	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed.	0
NZ_AP018164.1\|WP_096438964.1\|1934956_1935274_-\|hypothetical-protein	gnl\|CDD\|371259	pfam10824, T7SS_ESX_EspC, Excreted virulence factor EspC, type VII ESX diderm. T7SS_ESX-EspC is a family of exported virulence proteins from largely Acinetobacteria and a few Fimicutes, Gram-positive bacteria. It is exported in conjunction with EspA as an interacting pair.ED F8ADQ6.1/227-313; F8ADQ6.1/227-313;.	2.17682e-14
NZ_AP018164.1\|WP_096438968.1\|1936662_1937958_-\|ribonuclease-D	gnl\|CDD\|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	4.4731e-102
NZ_AP018164.1\|WP_096444273.1\|1937959_1938595_-\|DUF3000-domain-containing-protein	gnl\|CDD\|378665	pfam11452, DUF3000, Protein of unknown function (DUF3000). This is a bacterial family of uncharacterized proteins.	3.90437e-90
NZ_AP018164.1\|WP_096438982.1\|1946303_1947863_-\|alpha/beta-hydrolase	gnl\|CDD\|312032	pfam08386, Abhydrolase_4, TAP-like protein. This is a family of putative bacterial peptidases and hydrolases that bear similarity to a tripeptidyl aminopeptidase isolated from Streptomyces lividans. A member of this family is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterized from Propionibacterium freudenreichii.	1.20046e-16
NZ_AP018164.1\|WP_142404447.1\|1935270_1936494_-\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.90006e-05
NZ_AP018164.1\|WP_096438997.1\|1952445_1953387_+\|cytochrome-c-oxidase-assembly-protein	gnl\|CDD\|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	3.86539e-48
NZ_AP018164.1\|WP_096438991.1\|1950965_1951313_+\|DUF732-domain-containing-protein	gnl\|CDD\|368380	pfam05305, DUF732, Protein of unknown function (DUF732). This family consists of several uncharacterized Mycobacterium tuberculosis and leprae proteins of unknown function.	1.58485e-22
NZ_AP018164.1\|WP_096438986.1\|1948665_1949754_+\|cell-division-protein-ZapE	gnl\|CDD\|281902	pfam03969, AFG1_ATPase, AFG1-like ATPase. This P-loop motif-containing family of proteins includes AFG1, LACE1 and ZapE. ATPase family gene 1 (AFG1) is a 377 amino acid yeast protein with an ATPase motif typical of the family. LACE1, the mammalian homolog of AFG1, is a mitochondrial integral membrane protein that is essential for maintenance of fused mitochondrial reticulum and lamellar cristae morphology. It has also been demonstrated that LACE1 mediates degradation of nuclear-encoded complex IV subunits COX4 (cytochrome c oxidase 4), COX5A and COX6A, and is required for normal activity of complexes III and IV of the respiratory chain. ZapE is a cell division protein found in Gram-negative bacteria. The bacterial cell division process relies on the assembly, positioning, and constriction of FtsZ ring (the so-called Z-ring), a ring-like network that marks the future site of the septum of bacterial cell division. ZapE is a Z-ring associated protein required for cell division under low-oxygen conditions. It is an ATPase that appears at the constricting Z-ring late in cell division. It reduces the stability of FtsZ polymers in the presence of ATP in vitro.	9.27522e-110
NZ_AP018164.1\|WP_096438974.1\|1942015_1942711_+\|chlorite-dismutase-family-protein	gnl\|CDD\|225792	COG3253, ywfI, Predicted heme peroxidase involved in anaerobic stress response [General function prediction only].	2.60516e-102
NZ_AP018164.1\|WP_096438995.1\|1952020_1952389_+\|DUF732-domain-containing-protein	gnl\|CDD\|368380	pfam05305, DUF732, Protein of unknown function (DUF732). This family consists of several uncharacterized Mycobacterium tuberculosis and leprae proteins of unknown function.	3.41978e-23
NZ_AP018164.1\|WP_096444276.1\|1938716_1939523_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|235991	PRK07327, PRK07327, enoyl-CoA hydratase/isomerase family protein.	1.86168e-165
NZ_AP018164.1\|WP_096438988.1\|1949731_1950283_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.68493e-15
NZ_AP018164.1\|WP_096438976.1\|1943871_1944363_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	2.74046e-29
NZ_AP018164.1\|WP_096438999.1\|1953401_1954535_-\|glycosyltransferase	gnl\|CDD\|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	1.45848e-65
NZ_AP018164.1\|WP_096438970.1\|1939587_1940637_+\|uroporphyrinogen-decarboxylase	gnl\|CDD\|234644	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated.	0

>NZ_AP018164.1|WP_096438978.1|1944384_1944807_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MTSPDTQPKLQLSDDEWRKKLTPEEFQVLRRAGTERPFTGEYTDSKTQGVYECRACGAELFRSTEKFESHCGWPSFFDPSSSDAVILRPDHSFGTTRTEVLCANCHSHLGHVFSGEGYPTPTDQRYCINSISLRLVPDEH
>NZ_AP018164.1|WP_096438976.1|1943871_1944363_+|helix-turn-helix-transcriptional-regulator
MRHDDLHLEPCSILRPLGLLGDRWTMVVLRQAFAGVRRFEDFHSVLGLSRAVLAERLARLVDAGIFERRAYRDARRTRHEYRLTDKGMDLYPVLMALRTWGDKYLAPDGPFAHYRHVECGGSAEIHLVCDRCGDELTARDVQLEAGAGLRAWALGDAAGSGPG
>NZ_AP018164.1|WP_096438974.1|1942015_1942711_+|chlorite-dismutase-family-protein
MAKIDFDALNATIRYLMFSVFSVRPGALGEQREAVIEDATRFFKQQEERGVVVRGLYDVAGLRADADFMVWTHAERVEALQATYADFRRTTSLGQVSLPVWSSVALHRPAEFNKSHIPAFLAGEEPGAYICVYPFVRSYEWYLLPDEERRRMLAEHGMAAREYKDVRANTVPAFALGDYEWLLAFEAPELHRIVDLMRELRATDARRHTREETPFFTGPRVAVEQLVNSLP
>NZ_AP018164.1|WP_096438972.1|1940633_1942010_+|protoporphyrinogen-oxidase
MSARSYCVVGGGISGLTAAYRLRQAAGDDASITLLHPDEKLGGILRTEPVAGRPMDVGAEAFVLRRPEMPALLAELGLSERQLGTTGVRPLIYSQQSLHPLPPATVVGIPSSAASMGGLVDDATVAWIDTEPTRPLSWTLGSDPAVAELVGERFGEQAVARSVDPLLSGVYAGSAATIGLRAAAPGVAAALDRGAASLTEAVRAAAPPASSAPVFGAIDGSYQVLVDELRERSRARWVRAAVQRIEPAGSGWSLRDDAGTAWEADAAILAIPAPRVARLISAVAPDSSAAASRVTSASSAVLALAVPGDTAFPECSGVLVASGERLHAKAITLSSRKWGIPGDVQFLRLSFGRFGDDLAVTATDEQLLAWAADDLATVFGLRVEPVDARMQRWIEAMPQYGPGHADLVAEIRAGLPPTLAVAGSYLDGIGVPACIGAAGRAAERVIGATGGAGAGVAR
>NZ_AP018164.1|WP_096438970.1|1939587_1940637_+|uroporphyrinogen-decarboxylase
MRARRKLPESPYLAALAGRKPHRVPVWFMRQAGRSLPEYRKLRERHSMLAACLQPEVVCEITLQPIRRHDVDAAILFSDIVVPLRAAGIDLDIVADVGPVIAHPIRTDADIDAMKPLEAQAIQPVSEAVALLVDALGEVPLIGFAGAPFTLASYLVEGGPSRNHARTKTMMLSEPASWHALMSKLADLTVAFLRGQIEAGIDAIQVFDSWAGTLSLADYRQYVLPHSARVFATLAEYRIPMTHFGVGTAELLGAMSEAGATTVGVDWRTSLTDAAARVRPGTALQGNLDPVVLLAGWPAVERAARAVVDDGRRAVDAGARGHVFNLGHGVLPETDPGVLTDLVSLVHSL
>NZ_AP018164.1|WP_096444276.1|1938716_1939523_-|enoyl-CoA-hydratase/isomerase-family-protein
MPISYDEFPSLRFELGDNGVLEVVLDSPGLNSVGPQMHRDLADVWPAIDRDPAVRAVLVRGEGKAFSSGGSFDLIDETINDYEGRIRIMREARDLVLNLVNFDKPVVSAIRGPAVGAGLVVALLADISVAGRTAKLIDGHTKLGVAAGDHATICWPLLVGMAKAKFYLLTCETLLGEEAERIGLVSACVDDDDVLATATRIAGDLAQGAQNAIRWTKRSLNSWYRMFAPTFETSLGLEFLSFSGPDVQEGLAAHREKRPARFTGGTGS
>NZ_AP018164.1|WP_096444273.1|1937959_1938595_-|DUF3000-domain-containing-protein
MTRAYDDAERERRGGAAPVTSVEPGPFREAVAAMNAVNARPEIELGPIRPPQRLAPFSYALGAEVKHPDLEIVPERSEGDAFGRLILLYDPDGADAWDGTIRLVAYIQADLDSSEAVDPLLPEVAWSWLVDALESRTDQVTALGGTVTATTSVRYGDISGPPRAHQLELRASWTATTPEVGVHVEAFCEVLEHASGLPPVGVTDLGSRSRA
>NZ_AP018164.1|WP_096438968.1|1936662_1937958_-|ribonuclease-D
MGEPAADAPGSTEPEPIPLLHPAEGVPELAVTVREIAAAAELLGGGHGSFAVDAERASGFRYSNRAYLIQIRRAGAGTVLIDPVSHGTDSLTALRPVAEVLSTDEWILHSADQDLPCLAEVGLHPPALYDTELAGRLGGFDRVNLATMVERLLGFGLVKGHGAADWSKRPLPGEWLNYAALDVELLIELRAAIAQVLADQGKADWAAQEFEYLRTAGAREAVPAVRRDRWRRTSGIHKVRDRRGLAAVRELWLTRDVIAQRRDVAPRRILPDSAIIDAALADPKTAEELVKLPVFGGRNQRRSASVWLGALQAARDSRNQPEDAEPLNGPPPAARWSRRKPEAAARLEAARAGLAEVSQRVGVPAENLISPDLVRRLCWDWEPAADPVAAVEDFLRAGQARPWQRELVVGALAEAVQPPTDARDRPDVAGT
>NZ_AP018164.1|WP_142404447.1|1935270_1936494_-|hypothetical-protein
MPSEIGGLVGSLAGIGRNIAAKDWIATGIGAGAFGMETTKIIVKGIAERRIQAEISQGLEARTNPWAAEVPIIEWGIVAITVFEYSLGLGDATKGIEFDNGRSKLDAPMKDLKAAFPDTRWEGSAADEYANQNQAQLDRVTMMRDQDKAMMDILTAEVAQLTEIRRAIAGIKDGLTGCIFVALLIKAYGSEASCLVFQKVVTAAAITATVSAIGYMEFFSGTETRPKVKKVVEEYDKIIAEMKSYLLTSQTISSALTATGAKSTVSDFRTVTGPSGTPGAPPPPGVPAPPPPVAAPRLDPPTETGQPIGGTPSATRPADHAETISGPTLLTNPVPLQPASTTRRGNGAPAEADEAARPANDPRDATVDEGAEVAGAAPGTGATQRRPLEVASPKTQQAQPISDRETR
>NZ_AP018164.1|WP_096438964.1|1934956_1935274_-|hypothetical-protein
MTNLSVTSKYLVDVLAAAQDGTRENIRGSAAAVNGVGVNVWVNHGVSCGLGNDAVVEVEVRRAEAAELMVKVATNLAVKLRAAAKAYEGTDHRAAQELNKQVIPG
>NZ_AP018164.1|WP_096438982.1|1946303_1947863_-|alpha/beta-hydrolase
MSRHATFATILVAVTALVSGCVPGLAADPRFATDSGARPQGVAPSKPAPVGPPPIAAPKNDLSWHDCTSKTFTDAGVRPAPDVQLDCANYDADLDPVNGGSGTVNIGVVRAKSNRTPKDAGPLVFTTGTDLPSSTQLPVWLSRAGTDMLQTHPIVAVDRRGIGASSPIDCRDRTDRQTMRDQAQFETGDDPVANLSDVANTATTNCTDAIAPGSSAYDDAHAASDIERLRSLWDVPAVALVGIGNGAQVALAYASSRPSKVARLILDSPVALGTNAEAVAEQQVKGQQAALDAFAAQCIAVNCALGPDPKGAVSALLADARAGKGPGGASVAEVANAITVALGFPTGDRVGTTTTLANTLAAARSGDTNQLSALINRAAGALDSDGQFVNGCSDAVNRPTPDRVRELVVAWGKLYPQFGTVAALNLVKCVHWPTNSPPPPPKDLKIDVVLLGVQSDPIVGSEGVAATAATVINATAASKRVMWQGIGHGASVYSPCAIPPLLGYLDSGKLPTTDTYCPA
>NZ_AP018164.1|WP_096438984.1|1947887_1948667_-|pyrimidine-reductase-family-protein
MPDSAAGSGPETPLTLLGSARQLDDGELPQLYAYPEQDQPWVRANFITSIDGGATADGKTGTMAGPGDRLIFHLLRELADVIVVGAGTVRIEGYSGAQLGVAPRQHRQARGQTEVPQLAIVTKSARLDRDMPVFTRTEVPPLVLTCTAAAAGAGRLLADLAEVVDCSGEDPGEVDEAALLTILASRGMHRILTEGGPMLLGAFVQRDLLDELCLTIAPYIVGGLARRIATGPGQLLTRMHCSHVLTDDAGYLYTRYVKA
>NZ_AP018164.1|WP_096438986.1|1948665_1949754_+|cell-division-protein-ZapE
MRLIAARRYSSCMHGGRVGRLVDRHPTVSPERLIAQLKPPPTFADVSFASYRPDPAEPSQAAAVAACREFCEQAVRRRAGRRKPFGKRQVLPGVGLYLDGGFGVGKTHLLASAYYQLPGDGPRPPTPKAFATFGELTQLAGVFGFVECIDLLADYTVVCIDEFELDDPGNTTLISRMLAALVERGVSLAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIDGPDYRHRGLPPAPPPPTDKEVVARAAGVPGATLDDFDALCAHLATMHPSRYLSLIEGVTAVFLTGVHGIDDQNVALRLVSLTDRLYDAGIPVVASGAKLDTVFGAEMLAGGYRKKYLRATSRLLALSAAASSAREP
>NZ_AP018164.1|WP_096438988.1|1949731_1950283_-|GNAT-family-N-acetyltransferase
MEPVTGTVRLASPDSVDTDELAAVAARTFPLACPPSIARENVASFIDTNLSAARFAEYLTDPDRVILTAQHDDRIVGYTMVVNGVGDDPDVARAVDVRPTAELSKMYVVPDFHGGGLSAMLMKHAVGAVADWHVRSMWLGVNQENVRAQRFYTKHGFRISGTRTFRVGADLREHDYVMVRELS
>NZ_AP018164.1|WP_096438990.1|1950270_1950804_-|hypothetical-protein
MAKRHRWLIVLSTLLIAAASVTATGVAAPSARAGDAPIGHIGDTLRVDTGTYIADVTVSSVAPCDPPPGFGYTRSGVPIKSFPGSTPNRADITVRAVRVPNPYIMATNFSFDGVTPYGDAYKPRATDAPDALDNVLVNAPNGAIVRGGVYWDAYRDPVSNVVLLDKKTGQHLAQWNL
>NZ_AP018164.1|WP_096438991.1|1950965_1951313_+|DUF732-domain-containing-protein
MKRLLLLLGLAAMIGTAAPAAADPADDQFLAALQASGVTYKDPGKVISAAKWVCQTVNGGEQMADVVKTVEAENPGLVQENAAKFTALAASAYCPNKLPPAPAASPAPAVPVNNG
>NZ_AP018164.1|WP_096438993.1|1951320_1951932_-|hypothetical-protein
MAAIIVLDVFVGIIAVVALIATWNQLRARLNQPGARGVVIAVDQLAPRRKNIARVQVTLRMVGPAVRYEVALDLEADGNRYEASTPKPATRPSMGCDDEEMSWGFEIADDELDSVWVIASWIDARRARLRMAALAMNLSTLETYEWKWAADWRLSAAGHWRRRRVTTTPPRTLPGMGPLELGRPPGRGRLAQVAAETATDADE
>NZ_AP018164.1|WP_096438995.1|1952020_1952389_+|DUF732-domain-containing-protein
MRRLLTLFGVATAIALAGPVYADPTPSPTPTPDPAVDADFLAQLRQAGLNYQDPAAAISAAKTVCELVDSGETDTNIVNNLQLRNPGFSGNGAARFTAIAANAYCPKYLTGEGRGPKPEDTP
>NZ_AP018164.1|WP_096438997.1|1952445_1953387_+|cytochrome-c-oxidase-assembly-protein
MRAYPGPLTAGSLVATWQPDLTSAVMIVMVTVAYTWCYRRGRGHEHPATPVQASCFGVGMALWALATIGAIGAYAYVLFWVRALQVLLLLYVVPFFLAQGKPLTVVSGALGPEGRKRFDRLLSSTLARVSAHPLTTSLAMLATPWLLYLTPWYTAALDDEWVGAPTRILLVVIGFGYFYARLQADPVPHRYSQLISLLISVGEALGDGLLGLVIWQGSLIAATYYSALHRDWGPDQRLDQTIGAGVLWILGDVVGLPFVLLLMRALSRDERAHAIRVDAELDTAAQAAESDDTAPSGLWWEHDPQLRERFRRG
>NZ_AP018164.1|WP_096438999.1|1953401_1954535_-|glycosyltransferase
MKFVVASYGSRGDVEPFAAVVRELLTRGHDVRLAVPPMMVGFVESAGIASVPFGSDAPSATVMGDVLRNIRQAWVEWGASLKALADGADLLLTGKNEQGFAANVADYYGIPHAALHFFPGDHASLGGVMGTLAKRAEQTQRRELGLPDAAEPVPESLEIQAYEEFCFPGAATEWAEHGRRRPFVGALTLELPVDADAEVLSWIAAGTPPIYFGFGSGLKLPSPAETVAVIAAATAQLGERALVCSGPDNLSQLALPDHVKVVRAVNHAAVFPACRAVVHHGGAGTTAAGLRAGVPTLVLWLSVDDQPVWAQAVDRLGVGFGRGFWSSTLDLLVADLRSLLVDERAARAREVAATMTKPAESAARAADLLEEAARAGR

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Crispr_ID: NZ_AP018164_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018164_4

2208245-2208447

Orphan

Consensus_repeat	Method
ACCGACTCCGGCACCTTCACCGATGCCGGCACCGTCACCGT	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP018164_4

>merge|NZ_AP018164|4|2208245-2208447|PILER-CR
ACTGATTCCGGCACCTTCACCGACTGGGGAACCCTGACGGTCGCGCACGGCGGCACCCTCACCGAGAATGGTTTCCTCGACGTCAATACCACCTTCACCGATGCCGGCACGGTGACGGTTAGCCCGGGTGGCAGCGTTTTGGTCGAATCCGGCGCCACCGTGACCGACTCCGGCACCTTCATCGATGCCGGCACCGTCACCGT

>NZ_AP018164|4|1|2208245-2208447|PILER-CR
ACTGATTCCGGCACCTTCACCGACTGGGGAACCCTGACGGT	CGCGCACGGCGGCACCCTCACCGAGAATGGTTTCCTCGACGTCAATACCACCTTCACCGATGCCGG
CACGGTGACGGTTAGCCCGGGTGGCAGCGTTTTGGTCGAAT	CCGGCGCCACCGTGACCGACTCCGGCACCTTCATCGATGCCGG
CACCGTCACCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018164.1\|WP_096439434.1\|2216365_2217343_-\|quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176189
NZ_AP018164.1\|WP_096439429.1\|2211937_2213056_-\|transaldolase	unknown	unknown	gnl\|CDD\|235117
NZ_AP018164.1\|WP_096439435.1\|2217362_2218055_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096439413.1\|2200854_2201640_+\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_AP018164.1\|WP_170063194.1\|2218004_2218949_-\|heme-A-synthase	unknown	unknown	gnl\|CDD\|224528
NZ_AP018164.1\|WP_096439427.1\|2210396_2211941_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_AP018164.1\|WP_096439405.1\|2196174_2196513_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018164.1\|WP_096439419.1\|2204862_2205669_+\|DUF1206-domain-containing-protein	unknown	unknown	gnl\|CDD\|377695
NZ_AP018164.1\|WP_096439407.1\|2196654_2198403_+\|DUF3556-domain-containing-protein	unknown	unknown	gnl\|CDD\|371888
NZ_AP018164.1\|WP_096439411.1\|2199610_2200858_+\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_AP018164.1\|WP_096439423.1\|2208689_2209439_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|376480
NZ_AP018164.1\|WP_096439409.1\|2198576_2199608_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_AP018164.1\|WP_096439431.1\|2213070_2215161_-\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_AP018164.1\|WP_096439421.1\|2205681_2206083_-\|ATPase	unknown	unknown	unknown
NZ_AP018164.1\|WP_096444320.1\|2219091_2219694_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP018164.1\|WP_096439425.1\|2209435_2210347_-\|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA	unknown	unknown	gnl\|CDD\|213538
NZ_AP018164.1\|WP_096439433.1\|2215428_2216343_+\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|235293
NZ_AP018164.1\|WP_096439415.1\|2201693_2201927_+\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_AP018164.1\|WP_096439417.1\|2201980_2204779_+\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|234570
NZ_AP018164.1\|WP_096444316.1\|2194769_2195585_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153249

Protein	Function_ID	Function_description	E-value
NZ_AP018164.1\|WP_096439434.1\|2216365_2217343_-\|quinone-oxidoreductase	gnl\|CDD\|176189	cd05286, QOR2, Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	4.79987e-170
NZ_AP018164.1\|WP_096439425.1\|2209435_2210347_-\|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA	gnl\|CDD\|213538	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA. The opcA gene is found immediately downstream of zwf, the glucose-6-phosphate dehydrogenase (G6PDH) gene, in a number of species, including Mycobacterium tuberculosis, Streptomyces coelicolor, Nostoc punctiforme, and Synechococcus sp. PCC 7942. In the latter, disruption of opcA was shown to block assembly of G6PDH into active oligomeric forms. [Protein fate, Protein folding and stabilization].	1.42501e-122
NZ_AP018164.1\|WP_170063194.1\|2218004_2218949_-\|heme-A-synthase	gnl\|CDD\|224528	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones].	1.68778e-57
NZ_AP018164.1\|WP_096439427.1\|2210396_2211941_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_AP018164.1\|WP_096439419.1\|2204862_2205669_+\|DUF1206-domain-containing-protein	gnl\|CDD\|377695	pfam06724, DUF1206, Domain of Unknown Function (DUF1206). This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.	1.16219e-11
NZ_AP018164.1\|WP_096439407.1\|2196654_2198403_+\|DUF3556-domain-containing-protein	gnl\|CDD\|371888	pfam12077, DUF3556, Transmembrane protein of unknown function (DUF3556). This family of transmembrane proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 576 to 592 amino acids in length.	0
NZ_AP018164.1\|WP_096439411.1\|2199610_2200858_+\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_AP018164.1\|WP_096439423.1\|2208689_2209439_-\|6-phosphogluconolactonase	gnl\|CDD\|376480	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase.	7.66984e-95
NZ_AP018164.1\|WP_096439409.1\|2198576_2199608_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	0
NZ_AP018164.1\|WP_096439431.1\|2213070_2215161_-\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_AP018164.1\|WP_096439429.1\|2211937_2213056_-\|transaldolase	gnl\|CDD\|235117	PRK03343, PRK03343, transaldolase; Validated.	0
NZ_AP018164.1\|WP_096444320.1\|2219091_2219694_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.14786e-05
NZ_AP018164.1\|WP_096439413.1\|2200854_2201640_+\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	9.56511e-141
NZ_AP018164.1\|WP_096439433.1\|2215428_2216343_+\|protoheme-IX-farnesyltransferase	gnl\|CDD\|235293	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional.	7.35229e-137
NZ_AP018164.1\|WP_096439415.1\|2201693_2201927_+\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	1.11772e-13
NZ_AP018164.1\|WP_096439417.1\|2201980_2204779_+\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
NZ_AP018164.1\|WP_096444316.1\|2194769_2195585_-\|acyltransferase-family-protein	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	1.07145e-39

>NZ_AP018164.1|WP_096439421.1|2205681_2206083_-|ATPase
MADRTERSGPERNRIKTLTQAALNADKTVEQVEGVLDGLGKTMNDLTSSLSALNKTVARLDGGLDHLESTMESLDELAKRLITLVEPVEAIVQRIDYIVSVGEAMMSPLSMTEHAVRGVLGRLRNRAPTDSQN
>NZ_AP018164.1|WP_096439419.1|2204862_2205669_+|DUF1206-domain-containing-protein
MSDTTVPVTELAQNSVFERLARAGYVVNGLLHLIVGYLAIRVACGDGGTADQTGALATLAAKPGGPLALWVAAAALLMMGLWRLVESVLGRSSDRKADGPSSDASLRLKALGLAAVYLTFAYSAFGFARGAGRPADQQNSSISARLMETTGGTIALIAVGVVIVTVGCYHIYKGASRAFVDDLKGKSGDLVRRLGVAGYVGKGVVITLTGVLVIVAACRAEPKKATGLDGALKTLGAQHYGTVLLIAAGVGLITYGLYSFVMARSTKM
>NZ_AP018164.1|WP_096439417.1|2201980_2204779_+|phosphoenolpyruvate-carboxylase
MVEVSDALAPIGAVQRTRVGREATEPMRADIRLLGAILGDTVRELNGDEVFELVERARVESFRVRRSEIDRAEISHMFDGIDIHLAIPVIRAFSHFALLANVAEDIHRERRRHIHVDAGEPPQDSSLAGTYAKLDRADLDSATIAEALRGALVSPVITAHPTETRRRTVFVTQHRITELMRRHAEGHTETGYGRSIEQELRRQVLTLWQTALIRISRLQITDEIDVGLRYYPAALFEVIPQVNAEVRAALRARWPDTEVLPGPILQPGSWIGGDRDGNPNVTAAVVRRATGSAAFTALAHYLAELTELEQELSMSARLVAVTPQLAALAEACPEEARTDEPYRRAVRLIRGRLSATAGEILDQQPRHELDLGLQRYATPAELRADLDTVDESLRSHGSALLADDRLALLREGVHVFGFHLSGLDMRQNSDVHEEVVGELLAWAGVHPDYASLPEEKRVELLTAELSTRRPLLSDRARLSELAHKELSVIEAAAHAVARYGPAAVPNYVISMCQSVSDVLEAAILLKEAGLLDASNSEPYCPVGISPLFETIDDLHNGAAILHAMLELPFYRALVAARDDWQEVMLGYSDSNKDGGYLAANWAVYRAELSLVEVARKAGIRLRLFHGRGGTVGRGGGPSYQAILAQPPGAVNGSLRLTEQGEIIAAKYAEPQLARRNLESLVAATLESTLLDVEGLGDAAEPAYAVLDEIAALAHRSYAELVHDTPGFVEYFKASTPVSEIGSLNIGSRPTSRKPTESIADLRAIPWVLAWSQSRVMLPGWYGTGSAFQQWIAAGPEEERVAVLHDLYERWPFFRGVLSNMAQVLAKSDLGLAARYAELVADESLRRRVFDKIVAEHQRTIAMHRLITGHDDLLADNAALARSVFNRFPYLEPLNHLQVELLRRYRSGDDDELVQRGILLTMNGLASALRNSG
>NZ_AP018164.1|WP_096439415.1|2201693_2201927_+|preprotein-translocase-subunit-SecG
MELALQITLVVTSVLVVLLVLLHRAKGGGLSTLFGGGVQSSLSGSTVVEKNLDRLTLFVVGIWFVCIVGMALQIKYR
>NZ_AP018164.1|WP_096439413.1|2200854_2201640_+|triose-phosphate-isomerase
MSRKPLIAGNWKMNLNHFEAIALVQKIAFALPDKYYDKVDVTVLPPYTDLRSVQTLVDGDKLRLTYGAQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHDEDDALVAAKAAAALKHELTPIICIGEHLDIREAGEHVSYCEAQLRGSLAGLTAEQIAKVVIAYEPVWAIGTGRVASSADAQEVCGAIRKELGALASPKIAETVRVLYGGSVNAKNIGDIVAQDDVDGGLVGGASLDGEQFATLAAIAAGGPLP
>NZ_AP018164.1|WP_096439411.1|2199610_2200858_+|phosphoglycerate-kinase
MTEATLPTLEDLLAEGISGRGVLVRSDLNVPLDDEGAITDPGRIIASVPTLQALLDAGARVVVTAHLGRPKNGPDAKLSLAPVAAALGERLGRHVQLAGDVVGGDALARAEGLTDGDVLLLENIRFDPRETSKDDAERLALARQLAELVGPAGAFVSDGFGVVHRKQASVYDVATLLPHYAGKLVAEEIEVLEQLCSSTRRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQGYSVGKSLLEEDMVETCRGLLDTHADVLRLPGDIVVTENFAADSPPQFVAANAIPEDLMGLDIGPGSVKRFAALLANAETIFWNGPMGVFEFPAYASGTRGIAEAIVGATGKGAFSVVGGGDSAAAVRALKIPEDAFSHISTGGGASLEYLEGKTLPGIEVLGRPQPSEGDS
>NZ_AP018164.1|WP_096439409.1|2198576_2199608_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MTVRVGINGFGRIGRNFYRALLAQQEEGPGSSGADIEVVAVNDITDNATLAHLLKFDSILGRLPHDVTLEGEDTIVVGPAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKYDGSQNIISNASCTTNCLGPLAKVLNDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVLPELKGKLDGYALRVPIPTGSATDLTVELSKAAGADEINAAFKVAAEGKLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDNQAKVVSWYDNEWGYSNRLIDLVALVGKSL
>NZ_AP018164.1|WP_096439407.1|2196654_2198403_+|DUF3556-domain-containing-protein
MGFISPELPDVDHDTWQTRPRAARLQIVTRHWVEHGFGTPYGVYLLYLIKIGLYVAIPAAVISLTPGIGGLSRIGEWWAQPIVYQKAIVFTLLFEVLGLGCGSGPLTGRFMPPIGGFLYWLRPNTIRLPAWPDKVPFTAGDTRTVIDVALYATVLIDGLWAMLAPGAGGPVTPGGDVGLLDPVQVLPMIVALTLVGLRDKTIFLAARGEHYWLKLIVFFFPFVDQIAAFKIIILGLWWGAATSKLNHHFPYVVAVMTSNNALLRSKLFTPIKHRLYLDPVNDLRPSWLPKVMAHVGGTTAEFLVPGVLVFAADGQPWRWYLIGFMVLFHLNILSNLPMGVPLEWNVFIIFSLFYLFGHYGAIRAVDLNSPLLLAILLVALAFVPIGNLFPEKVSFLPAMRYYAGNWATSIWCFRVGAEATLEANVVKSSALVVNQLAKLYDPAIAEIVSDKTAAFRAMHTHGRALNGLLPRAIDDETQYSVREGEIVAGPLVGWNFGEGHLHNEQLLAAVQRRCDFAEGDVRVIVLEGQPIHTQKQWYRIVDAKTGLIEAGYVEVADMLSRQPWPEPSDEFPVYVTRRRAAR
>NZ_AP018164.1|WP_096439405.1|2196174_2196513_+|hypothetical-protein
MAPASTAVSPAAGESDRARAAADAADQRQADYFLRLLNQNRRVVEHRIEGYRKAIAGAEAAGNIEGAGALRRMARVEEQEREALTLMIEKLHCRFPAPGTEVAAHRSRLVAR
>NZ_AP018164.1|WP_096444316.1|2194769_2195585_-|acyltransferase-family-protein
MSDSGGPEAGDPELGKFDPGLTQRLMSVLRPILKTYFRSEVRGLDGFPPGGALVVGNHSGGMFPMDVPIFSIDFYDKFGYDRPVYTLSHDILFMGFTGELFRRTGYIRANPENAAKALRSGGVVVVFPGGDYDAYRPTLSENVIDFNGRKGYVRTAIEAGVPIVPAVSIGGQETQLYLTRGTWLAERLGIKRLLRSAILPVSFGFPFGLSAVVPPNVPLPTKIVTQVLEPIHIAEQFGEDPDLDEVDEHVRSVMQEALNDLAANRRFPILG
>NZ_AP018164.1|WP_096439423.1|2208689_2209439_-|6-phosphogluconolactonase
MSNIVEVLPNSDALVEAAGSRLVDTIGAAISARGRALIVLTGGGNGIGVLKYLRAESNRVDWPKVHLFWGDERYVPESDDERNEKQAREALLDHIDIPASQVHPMAASDGEFGTDLAAAALAYEQLLAANAGPGEQIPNFDVHLLGMGPEGHINSLFPDTPAVLESTRAVVGVKDSPKPPPRRITLTLPAIQRSREVWLLVAGAGKADAVAAALGGAQPVAIPAAGAIGQETTRWLLDAEAASKLPAGQ
>NZ_AP018164.1|WP_096439425.1|2209435_2210347_-|glucose-6-phosphate-dehydrogenase-assembly-protein-OpcA
MMVDLLDASTNAINKKLDGLREESGVVTLGRVGTLIIKSNSDELLEESIEAANAATHEHPSRVIVVVPGDTDAIESRLDAQIRVGGDAGGGEVVVLRLSGPLAGHAESVVTPFLLPDIPVVVWWPDVAPAVPAQDPLGKLAIRRITDVTNSDDPMSGIKGRLPGYTAGDTDLAWARITYWRALLTSAVDQKPHEEIESALVSGLRTEPSLDVLAGWLASRIDGPVRRAVGELKVELVRKTETITLSRPQEGTTATLSRTGRPDALVPLARRETRECLAEDMRRLDPDEVYFSALEGIDKVQYL
>NZ_AP018164.1|WP_096439427.1|2210396_2211941_-|glucose-6-phosphate-dehydrogenase
MTPGADSGQWHNPLRDKDDKRLPRIAGPCALVLFGVTGDLAHKKVVPAIYDLANRGLLPPTFSLVGFGRRDWDHEAFAQVIHDDVKRYCRTPFRQAIWERLAEGLRFVRGEFDDEAAFGRLAETLDKLDAERSVGGNHAFYLAIPPKSFPVVCEQLHKSGLARPQEDRWSRVVIEKPFGHDLKSACELNQVVNSVFPEESVFRIDHYLGKETVQNILALRFANQFWDPIWNAHYVDHVQITMAEDIGLGGRAGYYDGIGAARDVIQNHLMQLLALTAMEEPVSFKPDALQAEKVKVLSATQLAQPLDQTTSRGQYAAGWQGGEQVVGLLDEEGFSKDSTTETFAAITLEVDTRRWAGVPFYLRTGKRLGRRVTEIALVFKRAPHLPFDATMTDELGANALVIRVQPDEGITLRFGSKVPGSAMEVRDVNMDFSYGSAFAEDSPEAYERLILDVLLGEPSLFPVNAEVELAWQILDPVLDYWSTHGKPDPYESGTWGPASAFEMLQRTGREWRRP
>NZ_AP018164.1|WP_096439429.1|2211937_2213056_-|transaldolase
MTQNANLAALSAAGVSVWLDDLSRQRLQSGNLQELIDTKSVVGVTTNPSIFQKALAEGDAYDSQIAELAERGADVDATIRTVTTDDVRNACDVLAPQWEASDGIDGRVSIEVDPRLAKETDKTIAQAVELWKIVDRPNLLIKIPATEAGLPAITAVLAEGISVNVTLIFSVERHRAVMDAYLAGLEKAREAGHDLSKIHSVASFFVSRVDTEIDRRLEEIGSEEALALRGQAGVANARLAYAAYQEVFESGQRYQDLRANGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVVEGDKVTGTAAGAQEIFDKLSAIGVDLTDVFLVLEDEGVQKFVESWTELLDETQKQLGSADK
>NZ_AP018164.1|WP_096439431.1|2213070_2215161_-|transketolase
MTTLEEISTLTHPHHPDDWTDLDSAAVDTVRVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRAMTHDPSDTHWLGRDRFVLSAGHSSLTLYLQLYLGGFGLELSDIESLRTWGSKTPGHPEFRHTLGVEITTGPLGQGLASSVGFAMAARYERGLFDPDAAPGESPFDHYVYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDHNEISIEDDTNIALCEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAKAVIDKPSFISLRTIIGYPAPKLMNTGKAHGAALGDEEIAAVKKILGFDPDKKFEVRDEVIAHTRKLVDRGREAHEKWQAEFDAWAQREPERKALLDRLTAEKLPEGWDADIPYWEPGSKPLATRAASGKVLTAVGPKLPELWGGSADLAGSNNTTMDGVKSFGPPSITTKDYTADWYGRTLHFGIREHAMGSILSGIVLHGPTRAYGGTFLQFSDYMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTHQPIEHLAALRAIPKLSVVRPADANETAYAWRTVLARGNGSGPVGLILTRQGVPVLEGTNLEGVARGGYVLGDAGDDEPDVVLIATGSEVQLAVDAAKLLADRDIIARVVSMPCVEWFESQPSEYRDSVLPPSVSARVAVEAGIAQPWHKLVGDTGKIVSIEHYGESADAETLFREFGFTAEAVAAAAEQVVDN
>NZ_AP018164.1|WP_096439433.1|2215428_2216343_+|protoheme-IX-farnesyltransferase
MSVRGHVAPSRVRSTVLAYLALTKPRVIELLLVTAIPAMLLAHRGAVDPLLILNTLIGGMLAAGGANTLNCVADADIDKLMKRTARRPLARAAVPTRNALALGLVLTVTSFVWLRWTTNLLSGWLAIATIAFYVFVYTLILKRRTSQNVVWGGAAGCMPVMIGWSAVTGTIGWPAVAMFAIIFFWTPPHTWALAMRYKDDYKAAGVPMLPAVATERQVTKQILVYTWLTVVATLVLALAAGWLYALVAVLAGVWFLAMAHQLYAGVRAGEPVKPLRLFLQSNNYLAVVFCALAVDSVLALPTLL
>NZ_AP018164.1|WP_096439434.1|2216365_2217343_-|quinone-oxidoreductase
MHAIEINETGGPEVLRYVDTPEPTPGAGQLLIKAEAIGVNFLDTYFRSGQYPRELPFIVGSELAGTVAALGEGAPGSFRVGDRVVSAAATGAYAEFATAPAALTAQLPDDVTSEVAASVLLKGLTAHYLLTSVYPVKSGDAVLVHAGAGGVGLILTQWAHRLGARVITTVSTPEKERLSRRAGADEVLPYPDDAAEFGQRIRSLTGGAGVEAVYDGVGASTFDASLASLAVRGTLALFGAASGPVPPFDPQRLNAAGSVFLTRPSLAHFIRTGEEFSWRAGELFEAISAGTISIEVGGRYSLAEAARAHTDLQGRKTTGSLVLLP
>NZ_AP018164.1|WP_096439435.1|2217362_2218055_+|hypothetical-protein
MKLARPDVFHPRIVLAGPSRHPAGDADDAGLVAALRRRGLHARWLAWDDPENARADLVILRAGCDGAQRRDEFLAWAASIPKLLNPPAAIAWNLGAGYLADVQSAGVPTLPRGAPGKPVALIYFGGEQSHAFTQTQVVEPEFEVWDAGHAAVAAAAERAGIRPDELLCARVDVTGGPDDVRVGALDVVAPALGWTTLDTAARELAERRFAVAVESACERLGLGPLSHRGP
>NZ_AP018164.1|WP_170063194.1|2218004_2218949_-|heme-A-synthase
MRLVDLLPNPSLRVQRLVAALVILTQGGIAVTGAIVRVTASGLGCPTWPQCFPGSFVPVAHAEVPRIHQAVEFGNRMITFAVVVAAALAVLAVTRARRRTEVLVYAWLMPVSTVVQAVIGGITVRTGLLWWTVAIHLLTSMTMVWLSVLLYVKVGEPDGNGAGVVYTQVARPLRALTALSAVNLAVVLITGTLVTAAGPHAGDRSPSRTVPRLKVQVATLVHMHSSLLVAYLALLVGLGFGLLAVGAARVVLLRLGALLALVCAQAAIGTAQYFTGVPAALVAIHVAGAAACTAATAALWASMRERTEPEPLAG
>NZ_AP018164.1|WP_096444320.1|2219091_2219694_-|TetR/AcrR-family-transcriptional-regulator
MRRSAEAARRTRERIVAASVLRSSTDGLAGLTLGSLAEALQMSKAGVVGPFGSRLALQLAVLERAGEMFTAAVVHPSLDFEAGLPRLIAVIESWCRYLADSPFPNGCFVTAASCEFDGQPGELRNTVHDLVSRWRGFLREQTTTAQAAGDLDAHFDPEDLVSALNGIAMAANQEIQLLSDSCAGARARRLMLTHVDSHRT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	1219520-1219549	0	1.0
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	2987245-2987274	0	1.0
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	2987298-2987327	0	1.0
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	1427504-1427533	1	0.967
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	2011511-2011540	2	0.933
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	2011564-2011593	2	0.933
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	3122757-3122786	2	0.933
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_AP018164.1	4795872-4795901	2	0.933

1. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 1219520-1219549, mismatch: 0, identity: 1.0

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgcttcgctctgcatcgtcgccgg	Protospacer
******************************

2. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 2987245-2987274, mismatch: 0, identity: 1.0

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgcttcgctctgcatcgtcgccgg	Protospacer
******************************

3. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 2987298-2987327, mismatch: 0, identity: 1.0

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgcttcgctctgcatcgtcgccgg	Protospacer
******************************

4. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 1427504-1427533, mismatch: 1, identity: 0.967

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgcttcgctctgcatcgtcgtcgg	Protospacer
**************************.***

5. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 2011511-2011540, mismatch: 2, identity: 0.933

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgctgcgctctgcatcgtcaccgg	Protospacer
********** **************.****

6. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 2011564-2011593, mismatch: 2, identity: 0.933

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgctgcgctctgcatcgtcaccgg	Protospacer
********** **************.****

7. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 3122757-3122786, mismatch: 2, identity: 0.933

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
ccgcatcgcttcgctctgcatcgtcaccgg	Protospacer
** **********************.****

8. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to position: 4795872-4795901, mismatch: 2, identity: 0.933

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cctcatcgctgcgctctgcatcgtcggcgg	Protospacer
********** *************** ***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NC_022043	Paracoccus aminophilus JCM 7686 plasmid pAMI5, complete sequence	186542-186571	4	0.867
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NC_011370	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence	45023-45052	6	0.8
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_CP018865	Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence	130-159	7	0.767
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	NZ_CP018865	Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence	226961-226990	7	0.767
NZ_AP018164_2	2.1\|845103\|30\|NZ_AP018164\|CRISPRCasFinder	845103-845132	30	MT613935	Pseudomonas phage Persinger, complete genome	7338-7367	8	0.733

1. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to NC_022043 (Paracoccus aminophilus JCM 7686 plasmid pAMI5, complete sequence) position: , mismatch: 4, identity: 0.867

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
cggcatcgcttcgctctgcatcggcggcgg	Protospacer
*  ******************** ** ***

2. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 6, identity: 0.8

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
gctaatcgctgcgctctgcatcgttccggg	Protospacer
 ** ****** *************. * **

3. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to NZ_CP018865 (Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence) position: , mismatch: 7, identity: 0.767

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
tggcatcgctgcgctctgcttcgtcgaccg	Protospacer
.  ******* ******** ****** * *

4. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to NZ_CP018865 (Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence) position: , mismatch: 7, identity: 0.767

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
tggcatcgctgcgctctgcttcgtcgaccg	Protospacer
.  ******* ******** ****** * *

5. spacer 2.1|845103|30|NZ_AP018164|CRISPRCasFinder matches to MT613935 (Pseudomonas phage Persinger, complete genome) position: , mismatch: 8, identity: 0.733

cctcatcgcttcgctctgcatcgtcgccgg	CRISPR spacer
aacgctggcttcgctctgcatcttcggcgg	Protospacer
  .  * *************** *** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2262303 : 2273594

Shahe_endorna-like_virus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096439475.1\|2262303_2263581_+	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	1.9e-06	40.3
WP_096444336.1\|2263808_2265113_+	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	8.9e-07	37.1
WP_162899188.1\|2265144_2265822_-	class I SAM-dependent methyltransferase	A0A1V0SEN8	Hokovirus	1.2e-23	38.9
WP_096439477.1\|2266182_2267451_+	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	4.7e-05	38.7
WP_096439478.1\|2267472_2268729_-	glycosyltransferase	A0A1L3KK54	Shahe_endorna-like_virus	5.0e-07	41.9
WP_096439479.1\|2268735_2269863_-	NAD-dependent epimerase/dehydratase family protein	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	3.7e-17	24.8
WP_096439480.1\|2270040_2270952_-	sulfotransferase family protein	NA	NA	NA	NA
WP_096444338.1\|2271477_2272311_+	class I SAM-dependent methyltransferase	A0A2R8FDY2	Brazilian_cedratvirus	4.7e-54	50.7
WP_096444340.1\|2272496_2273594_+	acyltransferase	A9YX16	Burkholderia_phage	9.4e-18	28.8

DBSCAN-SWA_2

4300549 : 4307697

Synechococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096442333.1\|4300549_4301488_+	NAD-dependent epimerase/dehydratase family protein	M4QPK0	Synechococcus_phage	7.5e-16	27.4
WP_096442335.1\|4301494_4302703_+	glycosyltransferase family 4 protein	A0A2P0VNG4	Tetraselmis_virus	3.6e-10	27.6
WP_096442337.1\|4302677_4303631_-	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	1.5e-72	44.3
WP_096442339.1\|4303644_4304961_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.6e-86	39.6
WP_142404543.1\|4305193_4305958_+	class I SAM-dependent methyltransferase	A0A0A1EL42	Mycobacterium_phage	2.0e-22	42.2
WP_096442343.1\|4306002_4307697_-	GMC family oxidoreductase	A0A1V0S9J5	Catovirus	1.2e-06	43.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP018164

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection