CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_AP017622	Escherichia coli strain MRY15-131 plasmid pMRY15-131_2, complete sequence	0 crisprs	NA	0	0
NZ_AP017620	Escherichia coli strain MRY15-131	2 crisprs	c2c9_V-U4,DinG,DEDDh,cas3,csa3,WYL,PD-DExK	2	8
NZ_AP017621	Escherichia coli strain MRY15-131 plasmid pMRY15-131_1, complete sequence	0 crisprs	csa3	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP017620_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017620_1

1537771-1537894

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017620_1

>merge|NZ_AP017620|1|1537771-1537894|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_AP017620|1|1|1537771-1537894|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017620.1\|WP_001295403.1\|1527224_1528637_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_AP017620.1\|WP_001361449.1\|1532620_1533259_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_AP017620.1\|WP_000269501.1\|1544537_1545470_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_AP017620.1\|WP_000534305.1\|1538208_1539465_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_AP017620.1\|WP_061092687.1\|1530505_1532608_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_AP017620.1\|WP_000102278.1\|1546790_1546880_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_AP017620.1\|WP_000007283.1\|1548360_1548942_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_AP017620.1\|WP_000701040.1\|1547045_1548215_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_AP017620.1\|WP_061092688.1\|1535594_1537205_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_AP017620.1\|WP_000212678.1\|1537330_1537636_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_AP017620.1\|WP_000098896.1\|1541774_1542923_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_AP017620.1\|WP_001174942.1\|1539505_1540879_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_AP017620.1\|WP_001070010.1\|1533987_1534773_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_AP017620.1\|WP_000493947.1\|1541093_1541735_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_AP017620.1\|WP_000587589.1\|1534776_1535589_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_AP017620.1\|WP_001182363.1\|1543213_1544425_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_AP017620.1\|WP_001361451.1\|1533322_1533991_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|274451
NZ_AP017620.1\|WP_000190985.1\|1545466_1546492_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_AP017620.1\|WP_000528342.1\|1529193_1529403_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_AP017620.1\|WP_001070230.1\|1529858_1530485_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135

Protein	Function_ID	Function_description	E-value
NZ_AP017620.1\|WP_001295403.1\|1527224_1528637_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_AP017620.1\|WP_001361449.1\|1532620_1533259_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	1.48286e-120
NZ_AP017620.1\|WP_000269501.1\|1544537_1545470_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_AP017620.1\|WP_000534305.1\|1538208_1539465_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_AP017620.1\|WP_061092687.1\|1530505_1532608_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_AP017620.1\|WP_000007283.1\|1548360_1548942_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_AP017620.1\|WP_000701040.1\|1547045_1548215_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_AP017620.1\|WP_061092688.1\|1535594_1537205_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_AP017620.1\|WP_000212678.1\|1537330_1537636_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.20156e-64
NZ_AP017620.1\|WP_000098896.1\|1541774_1542923_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_AP017620.1\|WP_001174942.1\|1539505_1540879_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_AP017620.1\|WP_001070010.1\|1533987_1534773_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	2.00171e-162
NZ_AP017620.1\|WP_000493947.1\|1541093_1541735_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_AP017620.1\|WP_000587589.1\|1534776_1535589_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	6.83407e-174
NZ_AP017620.1\|WP_001182363.1\|1543213_1544425_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_AP017620.1\|WP_001361451.1\|1533322_1533991_+\|4Fe-4S-binding-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	3.27457e-75
NZ_AP017620.1\|WP_000190985.1\|1545466_1546492_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_AP017620.1\|WP_000528342.1\|1529193_1529403_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_AP017620.1\|WP_001070230.1\|1529858_1530485_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140

>NZ_AP017620.1|WP_000212678.1|1537330_1537636_-|monooxygenase
MATLLQLHFSFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_AP017620.1|WP_061092688.1|1535594_1537205_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKLMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEYGLLDRVFRLIVEEIKFADPGWSQCIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDQKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFDQM
>NZ_AP017620.1|WP_000587589.1|1534776_1535589_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATHPGERPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_AP017620.1|WP_001070010.1|1533987_1534773_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPQFWPVWLIIAGLLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDMFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_AP017620.1|WP_001361451.1|1533322_1533991_+|4Fe-4S-binding-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKKVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTAASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQENKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_AP017620.1|WP_001361449.1|1532620_1533259_+|YdhW-family-putative-oxidoreductase-system-protein
MNHQDELPLAEVSEIDEAKRQWLQGMRHPVDTVTEPEPAEILAGFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLENIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_AP017620.1|WP_061092687.1|1530505_1532608_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAIEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPGTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEDMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_AP017620.1|WP_001070230.1|1529858_1530485_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_AP017620.1|WP_000528342.1|1529193_1529403_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_AP017620.1|WP_001295403.1|1527224_1528637_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_AP017620.1|WP_000534305.1|1538208_1539465_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYSNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKANDTLLAGGTMNNLGGEDSETIVENGAIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_AP017620.1|WP_001174942.1|1539505_1540879_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>NZ_AP017620.1|WP_000493947.1|1541093_1541735_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_AP017620.1|WP_000098896.1|1541774_1542923_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_AP017620.1|WP_001182363.1|1543213_1544425_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_AP017620.1|WP_000269501.1|1544537_1545470_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_AP017620.1|WP_000190985.1|1545466_1546492_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQSHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_AP017620.1|WP_000102278.1|1546790_1546880_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_AP017620.1|WP_000701040.1|1547045_1548215_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_AP017620.1|WP_000007283.1|1548360_1548942_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_AP017620_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP017620_2

2148008-2148099

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP017620_2

>merge|NZ_AP017620|2|2148008-2148099|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_AP017620|2|2|2148008-2148099|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP017620.1\|WP_001044284.1\|2149404_2150646_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_AP017620.1\|WP_001028079.1\|2146050_2146545_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_AP017620.1\|WP_001230244.1\|2156972_2158145_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_AP017620.1\|WP_000420622.1\|2152453_2153374_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_AP017620.1\|WP_001126780.1\|2144245_2144632_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_AP017620.1\|WP_000979516.1\|2137258_2137468_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP017620.1\|WP_001361402.1\|2144639_2145440_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_AP017620.1\|WP_000024560.1\|2153373_2153679_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_AP017620.1\|WP_001120126.1\|2158274_2158967_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_AP017620.1\|WP_001063150.1\|2154426_2156973_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_AP017620.1\|WP_001240620.1\|2146565_2147894_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_AP017620.1\|WP_001001170.1\|2145449_2146040_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_AP017620.1\|WP_001151437.1\|2148522_2149119_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_AP017620.1\|WP_001297176.1\|2142450_2143542_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_AP017620.1\|WP_001143120.1\|2149139_2149367_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_AP017620.1\|WP_000209909.1\|2153830_2154430_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_AP017620.1\|WP_001307100.1\|2143541_2144234_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_AP017620.1\|WP_000191701.1\|2141524_2142163_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_AP017620.1\|WP_001361399.1\|2137522_2141485_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_AP017620.1\|WP_000535338.1\|2150938_2152195_-\|YccE-family-protein	unknown	unknown	gnl\|CDD\|182074

Protein	Function_ID	Function_description	E-value
NZ_AP017620.1\|WP_001044284.1\|2149404_2150646_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_AP017620.1\|WP_001028079.1\|2146050_2146545_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	1.07082e-105
NZ_AP017620.1\|WP_001230244.1\|2156972_2158145_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_AP017620.1\|WP_000420622.1\|2152453_2153374_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_AP017620.1\|WP_001126780.1\|2144245_2144632_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_AP017620.1\|WP_001361402.1\|2144639_2145440_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	5.36737e-141
NZ_AP017620.1\|WP_000024560.1\|2153373_2153679_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_AP017620.1\|WP_001120126.1\|2158274_2158967_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	4.708e-137
NZ_AP017620.1\|WP_001063150.1\|2154426_2156973_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_AP017620.1\|WP_001240620.1\|2146565_2147894_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_AP017620.1\|WP_001001170.1\|2145449_2146040_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	6.91729e-130
NZ_AP017620.1\|WP_001151437.1\|2148522_2149119_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_AP017620.1\|WP_001297176.1\|2142450_2143542_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_AP017620.1\|WP_001143120.1\|2149139_2149367_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_AP017620.1\|WP_000209909.1\|2153830_2154430_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	6.89272e-84
NZ_AP017620.1\|WP_001307100.1\|2143541_2144234_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	2.45431e-169
NZ_AP017620.1\|WP_000191701.1\|2141524_2142163_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.3356e-153
NZ_AP017620.1\|WP_001361399.1\|2137522_2141485_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_AP017620.1\|WP_000535338.1\|2150938_2152195_-\|YccE-family-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0

>NZ_AP017620.1|WP_001240620.1|2146565_2147894_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPGFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRIDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVIHQEP
>NZ_AP017620.1|WP_001028079.1|2146050_2146545_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCIGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_AP017620.1|WP_001001170.1|2145449_2146040_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHLDDAFFAGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL
>NZ_AP017620.1|WP_001361402.1|2144639_2145440_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_AP017620.1|WP_001126780.1|2144245_2144632_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_AP017620.1|WP_001307100.1|2143541_2144234_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
>NZ_AP017620.1|WP_001297176.1|2142450_2143542_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_AP017620.1|WP_000191701.1|2141524_2142163_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_AP017620.1|WP_001361399.1|2137522_2141485_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVELALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDERVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDGEAKTNIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPALIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_AP017620.1|WP_000979516.1|2137258_2137468_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_AP017620.1|WP_001151437.1|2148522_2149119_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_AP017620.1|WP_001143120.1|2149139_2149367_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_AP017620.1|WP_001044284.1|2149404_2150646_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGMVLLSSNVQAQTTPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVVAMEKELGKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKTNRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDTNGFCPMDKFDSVLNEAVK
>NZ_AP017620.1|WP_000535338.1|2150938_2152195_-|YccE-family-protein
MGSNIHGISCTANNYLKQAWHNIKKEHEKNQTYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECESLEKEFEEMQNDNDLSLFMRTLRTNGTEIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYGFMEYIESINACDDVFSEYCLEDENISVHPEQINTPGISDLDTGIDLSGISFIQSEINKTYELKYAPVDGDGYCLLRAILVLKQHDYSWALGSHKTQKEVYEEFIKIVDKPTIEALVDAAFCDLREDVKTLFGVDLQSDNKIQGVGSHMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFKDNKKLLALDTDASDRIKAVKNFLAVLSDSICSSFIVTSNVASISLGNESFSTDEDLECGYLMNTSNHYDVYLPPELFAQAYKLNNKERNAQLDYLTRYAI
>NZ_AP017620.1|WP_000420622.1|2152453_2153374_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFEPRKDWGKA
>NZ_AP017620.1|WP_000024560.1|2153373_2153679_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_AP017620.1|WP_000209909.1|2153830_2154430_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNKLETKIAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGSVPARRIDSLRQKTLTALREWLPEFAARCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_AP017620.1|WP_001063150.1|2154426_2156973_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSNTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLMKNQQANWWCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYQGYSSTIPIARFVDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_AP017620.1|WP_001230244.1|2156972_2158145_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_AP017620.1|WP_001120126.1|2158274_2158967_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPLTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP017620_2	2.1\|2148034\|40\|NZ_AP017620\|CRISPRCasFinder	2148034-2148073	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_AP017620_1	1.1\|1537814\|38\|NZ_AP017620\|CRISPRCasFinder	1537814-1537851	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947

1. spacer 2.1|2148034|40|NZ_AP017620|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 1.1|1537814|38|NZ_AP017620|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

541206 : 599659

Enterobacteria_phage(47.27%)

tail,tRNA,portal,head,capsid,integrase,holin,protease,terminase,lysis

attL 551357:551403|attR 600082:600128

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000912345.1\|541206_542592_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.9e-45	34.8
WP_001143508.1\|542627_543149_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190288.1\|543256_543469_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729155.1\|543470_544337_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.7e-30	37.5
WP_000776555.1\|544808_545351_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_000988384.1\|545569_546262_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_001361257.1\|546292_548902_+	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_000691076.1\|548914_549922_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_001255235.1\|549932_550448_+	fimbria assembly protein	NA	NA	NA	NA
WP_000805414.1\|550450_551083_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
551357:551403	attL	NA	NA	NA	NA
WP_061092788.1\|551416_552580_-\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	3.7e-198	86.0
WP_000488407.1\|552778_553057_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.9e-48	97.8
WP_000763385.1\|553104_553323_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	7.5e-36	100.0
WP_001386642.1\|553421_553703_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_032255841.1\|553713_554271_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	3.2e-62	62.9
WP_045173744.1\|554267_554426_-	DUF1317 family protein	A0A1U8QQC1	Enterobacteria_phage	1.8e-23	98.1
WP_024228451.1\|554422_555103_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	3.5e-132	99.6
WP_052953584.1\|555099_555885_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	2.4e-148	99.6
WP_000995439.1\|555890_556187_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.6e-49	100.0
WP_061092790.1\|556262_556469_-	hypothetical protein	K7P6H3	Enterobacteria_phage	4.2e-28	85.3
WP_061092791.1\|557024_557342_-	hypothetical protein	NA	NA	NA	NA
WP_061092792.1\|557473_557743_-	hypothetical protein	A0A2H4FNC7	Salmonella_phage	4.8e-32	75.3
WP_064767403.1\|557823_558513_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.2e-92	75.4
WP_001067459.1\|558617_558848_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	8.5e-22	68.0
WP_061092794.1\|558929_559469_+	regulator	M9NZI6	Enterobacteria_phage	7.5e-61	65.6
WP_077249156.1\|559465_560485_+	replication protein	A0A0K2FJ31	Enterobacteria_phage	6.7e-111	68.4
WP_001566186.1\|560481_561183_+	replication protein P	A0A0P0ZD31	Stx2-converting_phage	7.9e-127	97.0
WP_000145912.1\|561179_561482_+	protein ren	A0A0N6WES4	Escherichia_phage	2.6e-42	94.6
WP_001070442.1\|561549_561882_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_032139864.1\|561973_562081_+	hypothetical protein	NA	NA	NA	NA
WP_000709069.1\|562138_563665_+	recombinase family protein	Q3HQV4	Burkholderia_phage	6.1e-31	27.7
WP_001567061.1\|563776_564094_+	hypothetical protein	NA	NA	NA	NA
WP_000068668.1\|564298_565228_+	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	3.0e-57	40.0
WP_001309322.1\|565326_565428_+	hypothetical protein	NA	NA	NA	NA
WP_001053033.1\|565424_565880_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	3.7e-61	67.5
WP_000224919.1\|565879_566050_+	NinE family protein	NA	NA	NA	NA
WP_000774488.1\|566042_566333_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_001099712.1\|566329_566692_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
WP_032139865.1\|566688_566829_+	YlcG family protein	K7PHH3	Enterobacteria_phage	6.5e-09	69.8
WP_001205470.1\|566913_567270_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	2.3e-58	92.0
WP_000150292.1\|567249_568464_-	hypothetical protein	NA	NA	NA	NA
WP_000355468.1\|568466_569642_-	nucleoid-associated protein	NA	NA	NA	NA
WP_001120496.1\|569933_570260_+\|holin	phage holin, lambda family	U5P0K7	Shigella_phage	1.2e-56	99.1
WP_001518397.1\|570263_570740_+	glycoside hydrolase family protein	K7PKX1	Enterobacterial_phage	9.5e-84	96.1
WP_001228695.1\|570956_571139_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_000738423.1\|571229_571523_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
WP_001307652.1\|571885_572080_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_000453566.1\|572468_573014_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.0e-94	98.3
WP_001518400.1\|572988_574914_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
WP_000198149.1\|574910_575117_+	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001518401.1\|575113_576715_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.1
WP_001518402.1\|576695_578015_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	4.8e-234	98.6
WP_001299443.1\|578024_578357_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
WP_000063252.1\|578412_579438_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.9e-191	99.1
WP_001518405.1\|579479_579878_+	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	5.2e-51	84.1
WP_000752994.1\|579889_580243_+\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	9.0e-63	100.0
WP_001518407.1\|580254_580833_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.0
WP_000683145.1\|580829_581225_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.3e-70	100.0
WP_001518408.1\|581232_581973_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	2.4e-126	95.5
WP_001518409.1\|581988_582411_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	7.7e-69	95.0
WP_001518410.1\|582437_582827_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	3.4e-55	98.1
WP_001567091.1\|582819_585381_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	99.2
WP_000847401.1\|585377_585707_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	6.0e-53	92.7
WP_001518412.1\|585706_586405_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	9.9e-130	97.4
WP_024177847.1\|586409_587153_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-145	96.0
WP_000090882.1\|587089_587692_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	6.2e-88	85.1
WP_061092795.1\|587752_591232_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.2
WP_001228252.1\|591299_591899_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	3.4e-102	92.5
WP_061092796.1\|591963_594336_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A1X7QGG5	Escherichia_phage	7.9e-163	68.8
WP_061092797.1\|594335_594617_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	2.7e-17	47.8
WP_000235975.1\|594626_595331_+	hypothetical protein	A0A1X7QGH6	Escherichia_phage	5.4e-59	62.3
WP_016245272.1\|595341_595635_+	hypothetical protein	NA	NA	NA	NA
WP_000239881.1\|595827_596496_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001226375.1\|597034_598519_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_061092798.1\|598705_599659_-\|protease	omptin family outer membrane protease OmpT	NA	NA	NA	NA
600082:600128	attR	NA	NA	NA	NA

DBSCAN-SWA_2

953689 : 963131

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569365.1\|953689_954616_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8
WP_000783133.1\|954620_955352_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|955332_955440_-	protein YohO	NA	NA	NA	NA
WP_001240398.1\|955499_956231_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.8e-111	99.0
WP_001334139.1\|956452_958138_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	9.5e-304	99.5
WP_001308766.1\|958134_958854_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001361590.1\|958900_959371_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.5e-81	99.4
WP_001296231.1\|959411_959873_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_001361589.1\|959997_961998_-	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	94.9
WP_001292746.1\|961994_963131_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	5.9e-164	98.4

DBSCAN-SWA_3

1066237 : 1074954

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020233187.1\|1066237_1067632_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	32.2
WP_000183060.1\|1067806_1068700_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_042343238.1\|1069072_1070158_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.7e-99	53.4
WP_001023616.1\|1070157_1071057_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.2e-28	34.5
WP_023141668.1\|1071115_1071994_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.1e-107	64.1
WP_001100791.1\|1071998_1072547_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.2e-51	56.1
WP_001362820.1\|1072578_1073817_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_000735124.1\|1073826_1074954_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAI1	Catovirus	5.3e-32	30.4

DBSCAN-SWA_4

1128721 : 1240383

uncultured_Caudovirales_phage(33.33%)

transposase,plate,integrase

attL 1124320:1124379|attR 1242200:1242215

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1124320:1124379	attL	NA	NA	NA	NA
WP_061092887.1\|1128721_1129606_-\|integrase	integrase domain-containing protein	NA	NA	NA	NA
1124320:1124379	attL	NA	NA	NA	NA
WP_161971438.1\|1129675_1130029_-	hypothetical protein	NA	NA	NA	NA
WP_072275302.1\|1130389_1130746_-	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_061092889.1\|1130811_1131066_-	helix-turn-helix domain-containing protein	A0A2I7S995	Vibrio_phage	1.7e-15	61.2
WP_061092890.1\|1131062_1131524_-	hypothetical protein	NA	NA	NA	NA
WP_061092891.1\|1132136_1132472_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_085949836.1\|1132475_1133689_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.7e-103	58.4
WP_077249117.1\|1133661_1134207_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_063117468.1\|1134203_1134638_+	hypothetical protein	NA	NA	NA	NA
WP_063117471.1\|1136139_1136655_+	hypothetical protein	NA	NA	NA	NA
WP_063117478.1\|1136828_1137224_+	hypothetical protein	NA	NA	NA	NA
WP_063117472.1\|1138597_1142656_-	hypothetical protein	NA	NA	NA	NA
WP_063117473.1\|1142670_1143078_-	hypothetical protein	NA	NA	NA	NA
WP_063117474.1\|1143074_1143992_-	radical SAM protein	NA	NA	NA	NA
WP_000532923.1\|1144707_1145424_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001060216.1\|1145765_1147220_-	AMP nucleosidase	NA	NA	NA	NA
WP_063117475.1\|1148951_1150004_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_130090963.1\|1150264_1158244_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_063117477.1\|1158770_1159037_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_063117479.1\|1159061_1159628_-	hypothetical protein	NA	NA	NA	NA
WP_085949836.1\|1160243_1161457_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.7e-103	58.4
WP_077252459.1\|1161604_1165693_+	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	1.5e-23	35.6
WP_061093069.1\|1165703_1166045_+	hypothetical protein	NA	NA	NA	NA
WP_077249107.1\|1166089_1166803_+	RHS repeat-associated core domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	8.2e-23	35.5
WP_052895708.1\|1166805_1167099_+	hypothetical protein	NA	NA	NA	NA
WP_016248851.1\|1167221_1167530_-	putative addiction module antidote protein	NA	NA	NA	NA
WP_021550960.1\|1167533_1167851_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	9.3e-11	41.9
WP_072693178.1\|1167974_1169237_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.5e-70	38.8
WP_061093028.1\|1169803_1170721_+	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
1169400:1169481	attR	NA	NA	NA	NA
WP_001011018.1\|1170822_1171773_+	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
1169400:1169481	attR	NA	NA	NA	NA
WP_061093029.1\|1175840_1176674_-	DUF4225 domain-containing protein	A0A140XBD0	Dickeya_phage	3.0e-24	43.3
WP_061093030.1\|1176843_1177980_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_115314324.1\|1178086_1178461_-	RHS repeat protein	NA	NA	NA	NA
WP_164726265.1\|1178437_1178581_+	hypothetical protein	NA	NA	NA	NA
WP_061093031.1\|1178606_1179164_-	hypothetical protein	NA	NA	NA	NA
WP_096427308.1\|1179176_1180709_-	AHH domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	4.0e-22	34.0
WP_061093078.1\|1180932_1181460_-	hypothetical protein	NA	NA	NA	NA
WP_061093033.1\|1183212_1183506_-	hypothetical protein	NA	NA	NA	NA
WP_077249119.1\|1183525_1187944_-	DUF4150 domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	6.0e-23	33.7
WP_061093034.1\|1187946_1189128_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_061093035.1\|1189138_1191127_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_016159310.1\|1191340_1191859_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_061093036.1\|1192541_1193048_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_061093037.1\|1193067_1194552_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_061093038.1\|1194554_1194977_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_061093039.1\|1194981_1196805_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_061093053.1\|1196771_1197815_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_061093052.1\|1197831_1199118_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_061093040.1\|1199114_1199648_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_061093041.1\|1199650_1200994_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_061093042.1\|1201827_1204566_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.9e-84	31.1
WP_061093043.1\|1204562_1205306_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_061093044.1\|1205310_1206738_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_123056338.1\|1206846_1210278_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_061093046.1\|1210288_1211644_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_061093047.1\|1211665_1212145_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_061093048.1\|1212197_1212497_+	hypothetical protein	NA	NA	NA	NA
WP_061093049.1\|1212705_1213497_-	hypothetical protein	NA	NA	NA	NA
WP_061093050.1\|1213776_1214505_+	hypothetical protein	NA	NA	NA	NA
WP_096427310.1\|1214525_1215738_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-102	58.1
WP_072652861.1\|1216039_1217302_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	3.8e-71	37.3
WP_001302302.1\|1217644_1218442_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_021524272.1\|1218903_1219740_+	hypothetical protein	NA	NA	NA	NA
WP_021580845.1\|1219955_1220174_+	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	1.2e-09	51.9
WP_059256365.1\|1220255_1220546_+	hypothetical protein	NA	NA	NA	NA
WP_032283297.1\|1220590_1220887_+	hypothetical protein	NA	NA	NA	NA
WP_001519860.1\|1220960_1221203_+	hypothetical protein	NA	NA	NA	NA
WP_000505227.1\|1221307_1221658_+	hypothetical protein	NA	NA	NA	NA
WP_061093068.1\|1221721_1222126_-	H-NS histone family protein	NA	NA	NA	NA
WP_061093067.1\|1222283_1222763_-	DUF4756 family protein	NA	NA	NA	NA
WP_001519857.1\|1222917_1223463_-	replication/maintenance protein RepL	NA	NA	NA	NA
WP_021513673.1\|1224729_1225116_+	hypothetical protein	NA	NA	NA	NA
WP_001519853.1\|1226419_1227856_+	SIR2 family protein	NA	NA	NA	NA
WP_001519852.1\|1227872_1228484_+	TIR domain-containing protein	NA	NA	NA	NA
WP_001519851.1\|1228533_1228911_-	hypothetical protein	NA	NA	NA	NA
WP_061093011.1\|1228942_1229416_-	DUF4755 domain-containing protein	NA	NA	NA	NA
WP_021513669.1\|1229850_1230381_+	membrane lipoprotein lipid attachment site-containing protein	NA	NA	NA	NA
WP_000177655.1\|1230474_1231047_-	hypothetical protein	NA	NA	NA	NA
WP_001142313.1\|1231105_1231588_-	hypothetical protein	NA	NA	NA	NA
WP_061093010.1\|1231666_1233148_-	MobA/MobL family protein	NA	NA	NA	NA
WP_001608347.1\|1233797_1234106_+	hypothetical protein	NA	NA	NA	NA
WP_001608346.1\|1234109_1234988_-	hypothetical protein	NA	NA	NA	NA
WP_061093009.1\|1235292_1235658_+	hypothetical protein	NA	NA	NA	NA
WP_061093008.1\|1235654_1235960_+	conjugal transfer protein TraD	NA	NA	NA	NA
WP_000243502.1\|1236355_1236913_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_061093007.1\|1236965_1238429_+	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	NA	NA	NA	NA
WP_061093006.1\|1238571_1238961_-	VOC family protein	NA	NA	NA	NA
WP_061093005.1\|1239162_1240383_-\|integrase	site-specific integrase	A0A077KET4	Ralstonia_phage	6.2e-79	41.3
1242200:1242215	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2537188 : 2550116

Escherichia_phage(83.33%)

integrase

attL 2542691:2542704|attR 2551161:2551174

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368135.1\|2537188_2538121_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	2.1e-167	99.7
WP_001361863.1\|2538708_2539227_-	hypothetical protein	A0A2L1IV11	Escherichia_phage	1.4e-83	97.7
WP_001361862.1\|2539286_2547206_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV38	Escherichia_phage	0.0e+00	97.9
2542691:2542704	attL	NA	NA	NA	NA
WP_000243052.1\|2547230_2547851_-	LuxR family transcriptional regulator	A0A2L1IV08	Escherichia_phage	1.3e-117	99.0
WP_001181154.1\|2548168_2548798_-\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	5.4e-119	99.0
WP_001224627.1\|2549546_2550116_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	9.1e-49	52.2
2551161:2551174	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3193807 : 3260791

Enterobacteria_phage(33.33%)

transposase,integrase

attL 3199432:3199463|attR 3261732:3261763

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039267758.1\|3193807_3197305_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	2.7e-98	34.8
3199432:3199463	attL	NA	NA	NA	NA
WP_000422741.1\|3199516_3199942_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|3199938_3200289_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_001593684.1\|3200319_3201912_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.9e-181	63.4
WP_000612556.1\|3202007_3202355_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.8e-61	99.1
WP_001171523.1\|3202351_3202732_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000977396.1\|3203311_3204103_-	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_001313270.1\|3204121_3206092_-	TonB-dependent receptor	NA	NA	NA	NA
WP_001313273.1\|3207963_3208071_-	hypothetical protein	NA	NA	NA	NA
WP_089581225.1\|3208079_3208265_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_000803221.1\|3208435_3209752_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
WP_000551919.1\|3211246_3212590_+	esterase-like activity of phytase family protein	NA	NA	NA	NA
WP_001293447.1\|3212746_3213571_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000983423.1\|3213736_3215293_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_000859647.1\|3215292_3215982_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_000760916.1\|3216486_3216825_+	c-type lysozyme inhibitor	NA	NA	NA	NA
WP_000884152.1\|3217209_3217665_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_000919997.1\|3217726_3219085_-	YadA-like family protein	Q9MCI8	Enterobacteria_phage	5.6e-20	76.1
WP_131501864.1\|3219935_3220049_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	3.4e-08	71.4
WP_000609007.1\|3220311_3221265_-	transketolase family protein	NA	NA	NA	NA
WP_001101067.1\|3221257_3222088_-	transketolase	NA	NA	NA	NA
WP_000470229.1\|3222084_3223473_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000699820.1\|3223495_3223768_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_001317566.1\|3223846_3224290_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_001018808.1\|3224547_3225567_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.3e-17	25.8
WP_001366542.1\|3226162_3226354_+	hypothetical protein	NA	NA	NA	NA
WP_096427335.1\|3226422_3226671_+	osmoprotectant transport activator ProQ	Q2A0A1	Sodalis_phage	8.3e-07	39.1
WP_001167444.1\|3226688_3227237_-	hypothetical protein	NA	NA	NA	NA
WP_000958492.1\|3227514_3227748_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_000991578.1\|3227771_3228389_-	hypothetical protein	NA	NA	NA	NA
WP_001126822.1\|3228646_3229213_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_000792543.1\|3232943_3234992_-	TonB-dependent siderophore receptor IreA	A0A0P0I887	Acinetobacter_phage	1.1e-11	33.5
WP_153275894.1\|3235184_3236412_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	6.1e-175	98.0
WP_001075491.1\|3236523_3237255_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_000778605.1\|3237924_3238455_+	hypothetical protein	NA	NA	NA	NA
WP_001107214.1\|3239618_3240842_-	hypothetical protein	NA	NA	NA	NA
WP_000010402.1\|3240942_3241827_+	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_001282919.1\|3242029_3242710_+	WYL domain-containing protein	NA	NA	NA	NA
WP_001097304.1\|3242857_3243535_+	hypothetical protein	NA	NA	NA	NA
WP_001278282.1\|3243540_3243774_+	DUF905 family protein	NA	NA	NA	NA
WP_085949836.1\|3244198_3245412_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.7e-103	58.4
WP_000213705.1\|3246019_3246505_+	antirestriction protein	A9J566	Pseudomonas_phage	3.4e-12	31.0
WP_001186715.1\|3246520_3246997_+	RadC family protein	NA	NA	NA	NA
WP_000692345.1\|3247065_3247287_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_000086770.1\|3247305_3247950_+	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	4.5e-28	33.8
WP_001285113.1\|3247999_3248368_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000854719.1\|3248457_3248835_+	toxin	NA	NA	NA	NA
WP_000761679.1\|3248831_3249320_+	hypothetical protein	NA	NA	NA	NA
WP_000839266.1\|3249337_3249535_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_001440175.1\|3249619_3250465_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_000208386.1\|3250533_3250929_+	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
WP_001440173.1\|3250921_3251869_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_096427322.1\|3252272_3253538_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	1.2e-77	38.1
WP_096427323.1\|3253859_3255359_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_001045031.1\|3255540_3256281_-	porin family protein	NA	NA	NA	NA
WP_001275824.1\|3256390_3256867_-	hypothetical protein	NA	NA	NA	NA
WP_001330348.1\|3258175_3258478_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001049879.1\|3258775_3259117_+	hypothetical protein	NA	NA	NA	NA
WP_164523141.1\|3259578_3260791_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	7.9e-167	98.3
3261732:3261763	attR	NA	NA	NA	NA

DBSCAN-SWA_7

4069300 : 4073954

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061092936.1\|4069300_4070107_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	4.2e-47	42.1
WP_061092935.1\|4070122_4070761_-	aldolase	A0A077SK32	Escherichia_phage	6.6e-56	52.7
WP_061092934.1\|4070757_4072020_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.0e-93	45.8
WP_096427327.1\|4072676_4072880_+\|transposase	transposase	B6DZU5	Stx2-converting_phage	2.5e-33	100.0
WP_001339397.1\|4072929_4073607_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_000624622.1\|4073606_4073954_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6

DBSCAN-SWA_8

4576477 : 4622938

Burkholderia_phage(28.57%)

transposase,tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061092773.1\|4576477_4577269_+	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	2.0e-46	45.1
WP_061092772.1\|4577283_4577739_-	hypothetical protein	F6MIM0	Haemophilus_phage	2.3e-26	42.7
WP_061092771.1\|4577735_4578443_-	DUF4376 domain-containing protein	A0A0E3JQ06	Enterobacteria_phage	4.1e-14	42.4
WP_000135569.1\|4578439_4580020_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	1.3e-84	40.8
WP_000359520.1\|4580022_4580739_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.8e-22	37.2
WP_000951744.1\|4580731_4581847_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	6.9e-101	51.4
WP_001093498.1\|4581837_4582197_-	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	4.7e-35	64.2
WP_000679401.1\|4582295_4582997_-\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	4.9e-12	36.3
WP_001361462.1\|4583006_4584047_-	phage late control D family protein	A4JWL3	Burkholderia_virus	4.4e-73	44.8
WP_001269711.1\|4584034_4584244_-\|tail	tail protein X	A4JWL2	Burkholderia_virus	1.3e-16	60.3
WP_000271436.1\|4584243_4585197_-\|tail	phage tail protein	A4JWL1	Burkholderia_virus	3.3e-35	50.8
WP_001262479.1\|4585196_4587572_-\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	5.9e-57	26.1
WP_015674804.1\|4587673_4587802_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_000658214.1\|4587761_4588079_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_000907502.1\|4588129_4588654_-\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	9.5e-69	69.0
WP_000729835.1\|4588653_4590078_-\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	3.2e-191	70.4
WP_000875310.1\|4590067_4590265_-	hypothetical protein	NA	NA	NA	NA
WP_000404767.1\|4590261_4590717_-	hypothetical protein	NA	NA	NA	NA
WP_000777272.1\|4590861_4591176_-	membrane protein	Q5ZQY8	Pseudomonas_phage	9.2e-19	43.2
WP_000266448.1\|4591188_4591794_-	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	3.3e-57	57.1
WP_000758131.1\|4591796_4592084_-	membrane protein	Q6QIC8	Burkholderia_phage	1.5e-15	48.1
WP_000619864.1\|4592621_4592969_+	DNA-binding protein	Q6QIE8	Burkholderia_phage	2.2e-21	49.0
WP_001290321.1\|4593023_4594373_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000789981.1\|4594897_4596547_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000757333.1\|4596900_4597143_+	polysaccharide production threonine-rich protein	NA	NA	NA	NA
WP_001361463.1\|4597256_4597895_+	YjbF family lipoprotein	NA	NA	NA	NA
WP_000595548.1\|4597891_4598629_+	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_000745730.1\|4598628_4600725_+	YjbH domain-containing protein	NA	NA	NA	NA
WP_001328330.1\|4600771_4601050_-	hypothetical protein	NA	NA	NA	NA
WP_000202902.1\|4601264_4601675_+	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_001252058.1\|4601768_4602659_-	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_001361466.1\|4602673_4604218_-	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_000695387.1\|4604371_4605562_-	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000179165.1\|4605926_4607042_+	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	4.3e-18	31.7
WP_000973665.1\|4607113_4608454_+	maltoporin LamB	NA	NA	NA	NA
WP_170386723.1\|4608697_4609669_-\|transposase	IS30-like element ISApl1 family transposase	W5R8L2	Staphylococcus_phage	2.3e-52	39.1
WP_001361468.1\|4609768_4610689_+	maltose operon protein MalM	NA	NA	NA	NA
WP_061092770.1\|4610916_4612497_+	SopA family protein	NA	NA	NA	NA
WP_001308201.1\|4612719_4613217_+	chorismate lyase	NA	NA	NA	NA
WP_000455227.1\|4613229_4614102_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000017354.1\|4614256_4616680_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000002907.1\|4616850_4617219_+	diacylglycerol kinase	NA	NA	NA	NA
WP_000646078.1\|4617328_4617937_+	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_001562441.1\|4618009_4619335_+	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_001296638.1\|4619450_4619660_+	CsbD family protein	NA	NA	NA	NA
WP_061092769.1\|4619701_4620217_-	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_022646425.1\|4620534_4621539_+	DUF2713 family protein	NA	NA	NA	NA
WP_012602639.1\|4621900_4622938_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP017621

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6769 : 43165

Escherichia_phage(36.36%)

transposase,integrase

attL 6718:6777|attR 19193:20012

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6718:6777	attL	NA	NA	NA	NA
WP_001067855.1\|6769_7474_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001774155.1\|7524_8010_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	3.5e-49	86.2
WP_001138064.1\|8012_10979_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000427619.1\|11057_12062_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_061093065.1\|12280_12919_-	hypothetical protein	NA	NA	NA	NA
WP_000343103.1\|12918_13173_-	hypothetical protein	NA	NA	NA	NA
WP_000774874.1\|13524_14526_+	DUF4238 domain-containing protein	NA	NA	NA	NA
WP_000793307.1\|14701_15046_-	hypothetical protein	NA	NA	NA	NA
WP_001067834.1\|15631_16336_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000845048.1\|16783_17797_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_004201280.1\|17952_18426_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_001067855.1\|18495_19200_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000219391.1\|19321_20227_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
19193:20012	attR	NA	NA	NA	NA
WP_000004159.1\|20223_21462_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|21461_22046_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_096427337.1\|23099_23804_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.1
WP_001104248.1\|24720_25359_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA
WP_000069427.1\|25386_25839_-	hypothetical protein	NA	NA	NA	NA
WP_000277845.1\|25868_26330_-	hypothetical protein	NA	NA	NA	NA
WP_000830839.1\|26355_27348_-	conjugal transfer pilus assembly protein TraU	NA	NA	NA	NA
WP_001203745.1\|27344_27977_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA
WP_000214084.1\|27973_28360_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA
WP_001064268.1\|28356_30984_-	type IV secretion system protein TraC	NA	NA	NA	NA
WP_001278689.1\|31143_31365_-	conjugal transfer protein TraR	A2I309	Vibrio_virus	3.3e-07	40.8
WP_000809906.1\|31499_32015_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA
WP_001038341.1\|32011_32263_-	conjugal transfer protein TrbG	NA	NA	NA	NA
WP_001057292.1\|32259_32577_-	conjugal transfer protein TrbD	NA	NA	NA	NA
WP_000002780.1\|32573_33146_-	conjugal transfer protein TraP	NA	NA	NA	NA
WP_000146685.1\|33135_34563_-	conjugal transfer protein TraB	NA	NA	NA	NA
WP_072095570.1\|34562_35267_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA
WP_000399792.1\|35277_35844_-	type IV conjugative transfer system protein TraE	NA	NA	NA	NA
WP_000012106.1\|35865_36177_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_000340272.1\|36191_36551_-	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA
WP_001254386.1\|36584_36812_-	conjugal transfer relaxosome protein TraY	NA	NA	NA	NA
WP_000332484.1\|36905_37592_-	PAS domain-containing protein	NA	NA	NA	NA
WP_000124981.1\|37782_38166_-	relaxosome protein TraM	NA	NA	NA	NA
WP_000614936.1\|38442_39090_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_001234469.1\|39386_40208_-	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	4.4e-44	38.2
WP_000107535.1\|40328_40616_-	hypothetical protein	NA	NA	NA	NA
WP_000547939.1\|40640_40847_-	hypothetical protein	NA	NA	NA	NA
WP_042808424.1\|40848_41037_-	hypothetical protein	NA	NA	NA	NA
WP_001312861.1\|41537_41696_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_087522250.1\|41795_43165_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP017620

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP017621

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection