CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP018254	Calothrix sp. NIES-3974	50 crisprs	PD-DExK,cas14j,csa3,Cas14c_CAS-V-F,WYL,csx18,cas1,cas2,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,cas3,csx1,cas6,csm5gr7,csm4gr5,csm2gr11,csx19,csx10gr5,c2c9_V-U4,RT,cas4,csc1gr5,csc2gr7,cas10d,csx3,csm6	6	11	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP018254_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_1

76631-76743

Orphan

Consensus_repeat	Method
ATCATGGGGAGGTAGGAGACAGGAGGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_1

>merge|NZ_AP018254|1|76631-76743|CRISPRCasFinder
ATCATGGGGAGGTAGGAGACAGGAGGGGAAGGGTAATCCAACTTTCATAATTATCCCATTTTCTCTGAATCAGTGAAGTTGTGTATCATGGGGAAGTAGGAGACAGGAGGGGA

>NZ_AP018254|1|1|76631-76743|CRISPRCasFinder
ATCATGGGGAGGTAGGAGACAGGAGGGGA	AGGGTAATCCAACTTTCATAATTATCCCATTTTCTCTGAATCAGTGAAGTTGTGT
ATCATGGGGAAGTAGGAGACAGGAGGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096619909.1\|86422_87250_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_AP018254.1\|WP_096619897.1\|74915_75584_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_AP018254.1\|WP_157780603.1\|87419_87875_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096619885.1\|68188_68758_+\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NZ_AP018254.1\|WP_096619893.1\|72820_73288_+\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|335963
NZ_AP018254.1\|WP_096619907.1\|84602_85955_+\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240532
NZ_AP018254.1\|WP_096619883.1\|65267_67763_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|226857
NZ_AP018254.1\|WP_096619901.1\|76916_79922_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018254.1\|WP_096619891.1\|71656_72604_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377730
NZ_AP018254.1\|WP_096619889.1\|71138_71417_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_AP018254.1\|WP_096619895.1\|73438_74911_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|273593
NZ_AP018254.1\|WP_096619887.1\|69084_70812_+\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl\|CDD\|236020
NZ_AP018254.1\|WP_096619913.1\|87900_88713_+\|aminotransferase-class-IV	unknown	unknown	gnl\|CDD\|223193
NZ_AP018254.1\|WP_096619903.1\|81546_82557_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133016
NZ_AP018254.1\|WP_096619881.1\|63871_64987_+\|YjgP/YjgQ-family-permease	unknown	unknown	gnl\|CDD\|367632
NZ_AP018254.1\|WP_096619905.1\|83035_84244_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_AP018254.1\|WP_096619915.1\|88830_90675_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|273520
NZ_AP018254.1\|WP_096619917.1\|90910_91123_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096619879.1\|62679_63408_+\|LPS-export-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213185
NZ_AP018254.1\|WP_172892822.1\|80372_81365_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096619909.1\|86422_87250_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	3.48982e-08
NZ_AP018254.1\|WP_096619897.1\|74915_75584_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.20213e-85
NZ_AP018254.1\|WP_096619885.1\|68188_68758_+\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	2.96087e-86
NZ_AP018254.1\|WP_096619893.1\|72820_73288_+\|BON-domain-containing-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	1.1383e-10
NZ_AP018254.1\|WP_096619907.1\|84602_85955_+\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240532	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	2.04308e-58
NZ_AP018254.1\|WP_096619883.1\|65267_67763_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|226857	COG4449, COG4449, Predicted protease of the Abi (CAAX) family [General function prediction only].	0
NZ_AP018254.1\|WP_096619901.1\|76916_79922_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	6.78371e-27
NZ_AP018254.1\|WP_096619891.1\|71656_72604_+\|hypothetical-protein	gnl\|CDD\|377730	pfam06897, DUF1269, Protein of unknown function (DUF1269). This family consists of several bacterial and archaeal proteins of around 200 residues in length. The function of this family is unknown. The family carries a repeated glycine-zipper sequence- motif, GxxxGxxxG, where the x following the G is frequently found to be an alanine. As glycine-zippers occur in membrane proteins, this family is likely to be found spanning a membrane.	3.60455e-05
NZ_AP018254.1\|WP_096619889.1\|71138_71417_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.52231e-09
NZ_AP018254.1\|WP_096619895.1\|73438_74911_+\|HAMP-domain-containing-protein	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	1.20082e-51
NZ_AP018254.1\|WP_096619887.1\|69084_70812_+\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl\|CDD\|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NZ_AP018254.1\|WP_096619913.1\|87900_88713_+\|aminotransferase-class-IV	gnl\|CDD\|223193	COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism].	2.28054e-41
NZ_AP018254.1\|WP_096619903.1\|81546_82557_+\|glycosyltransferase	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	9.17454e-24
NZ_AP018254.1\|WP_096619881.1\|63871_64987_+\|YjgP/YjgQ-family-permease	gnl\|CDD\|367632	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.	4.32243e-83
NZ_AP018254.1\|WP_096619905.1\|83035_84244_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.10435e-48
NZ_AP018254.1\|WP_096619915.1\|88830_90675_+\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_AP018254.1\|WP_096619879.1\|62679_63408_+\|LPS-export-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213185	cd03218, ABC_YhbG, ATP-binding cassette component of YhbG transport system. The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.	1.93537e-147

>NZ_AP018254.1|WP_096619897.1|74915_75584_+|response-regulator-transcription-factor
MNRILIAEDESRIAAFLEKGLRSHNFTTTVAEDADSASNMAMSGEFDLLILDLGLPGKDGLEVLEEVRGQGEKIPVIILTARDDIQDKVAGFEAGADDYLTKPFRFEELLMRVKARLRNHNDNQRQEELVLRVGDIILDVRSRKVKIKGRSTELPAREFTLAETFFRHPGQIFSREQLLDRVWGYDYDPGSNIVDVYVGYLRKKLGNDLIETVRGIGYRLRT
>NZ_AP018254.1|WP_096619895.1|73438_74911_+|HAMP-domain-containing-protein
MKILVEARTRILLWYLLLMSVFIGIAIPTIRQRLYLKVQERVEHDLRDEIEDFENVVKNGFQAEDEQDIEKLKRLRADKIIWTPPKNKEELREVFDIHFAEELPEDDVYFIAIINGEFYKSTPRALPEIIDRRSDFMQKWKRLQQRSQNEIQVNDPQIESILYIAHPFRIPDGTTGVFVVAHVTAGERKEAREALQVMMEVVAIVFILASFMAWWVAGRVLKPLRTLRETAQSISETNLTKRIPIHGQGEIADLAKTFNGMMDRLELTFAAQRDFINDAGHELRTPITIIRGHLELMGDDPQEQRETIALVMDELDRMNRFVDDLLLLAKAERPDFLQLETVNVANFTEELFLKATALAPRNWKLGGIGRGNVVIDRQRITQAVMNLAQNATQYTSKDDNITIGSGVSKGKVRFWVADTGAGIPSADQKRIFERFARGTSGRRRSEGAGLGLAIVKVVAEAHRGQVYLKSQLGTGSTFTIVMPVEPPPEV
>NZ_AP018254.1|WP_096619893.1|72820_73288_+|BON-domain-containing-protein
MKKSIILIFSSFLFLGLAGCDTFRTATNAPDRVTDEVQAPTAQEAQDAQADATSETRRRQLDADIQAREERNNLLNDGAATNRSDSDLASQVRSKLEANLPASALVVESENGNVTISGTVPTQQQYERIPNLAKEIKGVNNVTLNVAVAPAQPEN
>NZ_AP018254.1|WP_096619891.1|71656_72604_+|hypothetical-protein
MEQHQRAVGAFARHTDTKLALTELQQANFPMDKVSVIAKDAKNKDDIAGVEVKEHIGNKADEGAVAGAVAGGTVGGVTGLLVGLGLLAIPGIGPIMLAGAEATAIASALAGGAIGTAAGSLTGALIGLGIPDDKAKVYSDLVDNGYYLIIVNGDSREIAIAEMILRNRGIEHWDTFHPVPSANANNSSATLNGRYKYAVGHFFLRQDAEKAVTELRMNDFPMQNVSIFAKPSVGVSEIHEIPITTSNYDFAVLEIPHHQIENYQRRVELGDYLLALHGTDIQLAAAQNILQRNGIQNYEVFTPKVTNQTAPAGTI
>NZ_AP018254.1|WP_096619889.1|71138_71417_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MDIIAWLVLGLIAGALAKLFYPGRQGGGIISTIALGIFGALIGGYLGQVLFGSGAAAAASAGALSLGSIFFAVLGAMLLIFIWGLLTRRTTV
>NZ_AP018254.1|WP_096619887.1|69084_70812_+|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MNFRNVNEVWGYVFAEVLFRLGLRTVVICPGSRSTPLTMAFAGHPQIEAIPVLDERSGAFLALGRGLVTGVPTAVVCTSGTAGANFYPAVIEASESRVPLLLLTADRPPELRFCHSGQTIDQVKLFGNYPNWYGELNIPGVDRENLTCLRQTLVYAWERCLLPIPGVVHLNVPFRDPLAPVGDGVDLRGVEKVLDDDFFQHLNLQDVPVNFPTKLPLSVVGEWKKVQRGIIIAGVARPQHPEQYCQAIAGFSRFLNFPVLAEGLSPVRNHADLFDHLVCSYDSILRRPDFANSLVPDVVIQVGELPTSKVLRGWLQKHQCRTWVIDPTYHNLDALHNPTTHLRIHVEEIALPDIDTDNSGADNFDYQQKWLELEFKTQQHLQQIISQTTDLFAGKAPWLLSQYLPPNTNIFIANSMAVRDVEFFWQPNSSRLRPFFNRGANGIDGTLSTALGVAHRQSSSVLLTGDLALLHDTNGFLIRHQFIGHLTIILINNNGGGIFEMLPISQFDPPFTDYFLTPQQIDFSLLCQTYGVEYHLITSWSDFQTKLNPLPTQGIRVLELPTNGKFDANWRREYL
>NZ_AP018254.1|WP_096619885.1|68188_68758_+|6,7-dimethyl-8-ribityllumazine-synthase
MAVFEGNFTSSQSLRFALVIGRFNDLITTKLLEACQDCLKRHGVDVNPHGQQVDYVWVPGSFEIPLVARQLALSQKYDAIICLGAVIRGQTPHFDYVSAEVSKGIAAASFQTGVPVVFGVLTTDTMQQALERAGIKGNHGWDYAMTALEMATLMRQIRKGMGNNAYPNPQSLPASFTANYDSIATESKE
>NZ_AP018254.1|WP_096619883.1|65267_67763_-|CPBP-family-intramembrane-metalloprotease
MFPVTRKPSLRFSILILLTILLIWLLSVSVARSQAKQSNYAVHIARDFNQSGFYPLNQNPGSHYKPVADWVGRLILPTREELGDGLDWVWMEVESAPGSASGLVGKVVRLQWQKNPDLETYLQGVRRDINFSESVIQSQQQGIIHPSRLNQVRNVGVLRSLAGANPLDDAIVAFRGNTVVIQDAESKTNTPILEIDSEPVLVAARFYGLVKIIKPVPSPVFQNSAKSHQKPSPEYFLVQHYNPTSQKFDGTTEIIRIPQQTIDTRGFAPSTPRQIEKSPGGTDGWYIYGAKDVNNIFVARAIVPATLFALSPRQTIVGTEAGINYIKHLNWRNTPNQKGKLNTVLVLPDDQSATTWQEGDKAIVLHLFGGIGGEKAEPLGVVETITGHFAFGIAEVIRDEFTNKLRFDIKYYQIYAHNPDGIISGIHNWDYYMGNLQHGWLHTRPVSDVLIKFAPVTQDYDFDGVKLSPIQEFQKQLQIAIARYRTGDGTGGATVSPATSCVQDSNQALYATIQVIKQQIATNPQIQTWLQTNPDHPQTQRFQQLVQLGQSLEQQLTPLGIIRADWQSQASMLAGTGRGEDIQPFRDGSIWAGLTTWRTMMPRQSHDDIARIFLQQGATLQFLRTNQVGGWQSTIKPLAPTVFFGQIKIPQTDISPLPVLLNRLLASLLIPTTRDLGIVAIALIFFSVITIPIGFKFNFLHLQYWSGNWLQKLLLSLRCLFLPALLEELFFRVLLLPHPIETTNWYIWGMWGIFGLFLFIIYHQITAKYLSLAARAIFSHPIFFSLATLLGITCTITYALTGSLWTIVFIHWIVVMVWLVFMGGMGKFSNS
>NZ_AP018254.1|WP_096619881.1|63871_64987_+|YjgP/YjgQ-family-permease
MDRYLLRELLPPFLFGVGAFASLVLAIDSLMELMRKLVESGLPIGVAVKVVFLQLPKSVVFAFPMSTLLATLMTYSKLSSESELIALRSCGVSVYRMVVTAVMLSLMVTGLTFVFNEQIVPAANFEAATTLDAALKSERPSFKRENIYYPEYRQFRDEQGNKQRILTRLFYADQFDGQRMKGLTIIDRSQEGLNQIIVAESGEWNPTENIWDFYNGTAYLVSPDRSYRNIVRFQHQKVELPSAPLDLAQRSRDYEEMNIAQSLEQLELERLAGDEQKIRKLKVRIQQKMALPFACLVFGLVGSAVGTIPQRTGRAASFGLSLVVIFTYYLALVTTRALGDGGILSPIVAAWSPNVFGLTAGLFLLVRIANR
>NZ_AP018254.1|WP_096619879.1|62679_63408_+|LPS-export-ABC-transporter-ATP-binding-protein
MKIVLENIQKSYGKRVIVNRVNVCVGQGEVVGLLGPNGAGKTTTFYITTGLEKPDQGRVWLDNLDITSLPMHRRARLGIGYLAQEASVFRQLTVRDNLLLVMEQTQVPRWEWAMRMDNLLREFRLEKVANSKGIQLSGGERRRTELARALAAGREGPKFLLLDEPFAGVDPIAVAEIQQIVDKLRDRNMGILITDHNVRETLAITDRAYIMREGQILASGGADELYANPLVRQYYLGDNFQA
>NZ_AP018254.1|WP_096619901.1|76916_79922_-|pentapeptide-repeat-containing-protein
MNLNLRNWLGEHYRPRANLLLFLSADASGVSIRIIRDMEAKSLVIFDICSFAEVLEQPLELAWAEIPAYTELTLQLLRAFSRKKTLTRNEGTWLAFQIAYLKALAEVLQVEIQQQKSWLDRALFPREVTNATTTGISLQPPVKLEHPRLVAVLKTLYPGKLTDTQAEQALELLSDSLLAQQMQNAVITWLIANGAEEMEAKLISQRIAIALTGHLLTVVAENAAALPQLQKFLRLGNICPRNQVPVNFIAKANRRVQPGGMQGDWIDLPRERYRGQLIRDLAKPLYGEFFALPDIYVPPKGVPIGETTISGLPISSVDLFAWLQGELADFRSITWIEAESGCGKTSFLRMFAAHVARHLYPEWMPIVVRLRDIQIGTDFLASIASGFPETLAEQVQFWLDSESIKCLVLLDGLEELPKKQRQILVRQLLQFQSHSLHKFAITARCGEFEQLEQTTNLTLVRRVLIQPFQQEEWKQWFQNWAKVQSLNIAQGFFGFLKTVGAFTSIHAERSSLPQIMVFVSQPLMLYLLAVLHREGLLEETLLQTATTTAKHRGGFFLWEIGMRLQRWLLGYPENGGVKTALVREGMAHIYGNTYPHNRLYNYSQARQLYRWIQQLALQNWRSQRYITTPDQQFLLPNFLLQHSPTHPQQIEFSHPYLQKLITATAIASELSTTIHPQADPKDYAQFCYDLFGCHLIDWELQELILETLRRQPPRHGILAILREKLLEFWQEYQRSTWLDQGIAHRTLEKYHKYGNSTQIEAIHAYVGINTFFLLSSLHQETKTTFFPGGIPNTSDFNPHAIAELIARTNLIAIHTFSDRTHANGLQAVDLSHMNLSGTLLNFAHLNSVNLSNANLTDTNLTGADLTGADLTNANLTGANLTGANLSHTNLIGANLSGANLTEVIFNTTNLTNACLAGAILSESDRETARLQGAIFSQEDFFVIKRLLSQHELSSYASEYGHSTSIWMGVSGMVAIETSEGEILSEEEYEDETVVNNYEQEV
>NZ_AP018254.1|WP_172892822.1|80372_81365_-|hypothetical-protein
MMTTHQHAIVCCVESGWLECQTIRMIESLRRWGGVFADAPVLAVIPRFGPPLSRSTLAAFEQLQVEHVWLKNRDRYPWDKFLNKPYAVLTAENHFQTDSIIWLDGDLLIVDEPHLLHLGENEDFVACASDRNIGTTGVNDPNEPYWRSVCQATGIDIEALPWITTEREGANIRLYWNGGVFAYRRSCQFAQHYLDTCLQVFDAQIASQNSGVFFNEQISLGLAMFKAGLRWRSLPESHNYAMGSKTHDTWYVQEYLQAAKIIHYHDAMWPWFWDTFINCLEQTHPDVANWLKPQGAMSNQAPLQWRILRKALDSMRKGRQTAYLRKCKVV
>NZ_AP018254.1|WP_096619903.1|81546_82557_+|glycosyltransferase
MKSLGVVVIGRNEGMRLVRCLESLLAENSPNLNLHIVYVDSGSTDGSIIQAQSLGVEVVELDLSIPFTAARARNAGLEFLVCRHPQLEFVQFVDGDCRIAPGWLERGIKELEKHPEIVVVCGRRREEYPEKSIYNRLCDIEWNTPVGEAKSCGGDAMMRVTALQRVGGFNPSLIAGEEPELCVRLREAGGKIWRIDGDMTYHDAQMTKFSQWWKRSLRAGHAYAEGAWLHGNTSQRHWLKETVSIWIWGFVIPCLAMITAWWTQGWSLVLLLVAYIWLGYKVYRSTRDRSFNRTDACYYAIACTVGKFPQIQGQIQFFLSRILNRQNTLVEYKSAS
>NZ_AP018254.1|WP_096619905.1|83035_84244_+|glycosyltransferase-family-4-protein
MKIAYLVNQYPKVSHSFIRREIEAIETHNVEVFRFSIRSCATELVDPLDQEELSKTKVILERGVWGLFTAFIFVFLTRPLAFFPALQLAVKLGWRSDVGILKHLIYFAEACVLFRWLKPIQVSHLHVHFGTNSTTVALLCHRLGGPKYSFTAHGPEEFDRARSISLSEKIHDARFVVAISEFGRSQLYRYCDYTQWEKTHVIRCGLNSELFQTSATPVPDNYHLVCVGRLCEQKGQLLLINAVQKLREQGIIVYLTLVGDGEMRQPIEALIMTLNLQQQVKITGWANQTQVQEYIRDSRVFVLPSFAEGLPVVIMEAFLMERPVISTYVAGIPELVKNQFNGWLVPPGSVTALVDAIKKAINTSPEELQKMGNMGKQAVLENHDIRHTAKQLIELFKRGENR
>NZ_AP018254.1|WP_096619907.1|84602_85955_+|oligosaccharide-flippase-family-protein
MVTKLKSKTVRGAAWTIAGYGTSQLIRFGGNIILTRLLAPQYFGFMAVVNTLLIGIELLSDLGIGQSIIQHKRGDDPEFLNTAWTLQIVRGVGIWLLCLAMTIPVTNYYGDRRLLWMFPLMGLGSVILGFMSTAYVQLNRHMDLRKVVSFDITIQTLSLGILIILAFFFKNIWIFAVAGLAGNILRTLGSHWMIAGKLPRFAWEKDALRDLISFGKWMFVATALMFLAEQSDKLIVGKLLSLEVLGVYSIAATLANMPREVIKSLSYRVIFPTISAQTDLSRSELRTKIAQKRQKALLAVAIGLALLVNIGDGVIAFLYDQRYTAAIWMMPILCSGIWFSVLFYTLSPALVALGQPVYVAQSNLMRFLMISVGLPLAYTQWGVVGAIATIALSDFPLYLAINYGLWREKLSCFRQDMQSTLVYIAALLIFMLIRVVCGLGTPFDSIPPLS
>NZ_AP018254.1|WP_096619909.1|86422_87250_+|pentapeptide-repeat-containing-protein
MNSPEPERYVNQNLRRRSFRGENLRNADFRGADLRGCDFSYCNLTGANLSRVRVGKTPADALLVTVITLIVVIAAFHAMSQMLFAVMGLTPEDDSWKYVLALIISLAIAVIFAAMRHWLEYRRIATILSGAASSALLGFYYGGVFSNKNLQIAAITAAISAIIIAVFSYFGSGLVAIAVSVAGCVASYGLTFFVGVWAIIHLSGQSWLWGICLSLLTLILMAIALVNLLLAYREISHFRITSFRGANLTNTNFEGVNLSHANTSGAIFSKHGSIG
>NZ_AP018254.1|WP_157780603.1|87419_87875_+|hypothetical-protein
MLLNRFLPKIQAPEVMGVKGTFPTLVSWWEGLYSWLVMVMSFLMTFTFVIPAVPILNESRDSSLISGQLGMIFPLLWLFSAAFLFQVEYLYKNLLIQSYTNHQNQSKKSRLSNPDSSHLIEQELNQMRTNLGMTVVHKKNQPNQTNRHTQK
>NZ_AP018254.1|WP_096619913.1|87900_88713_+|aminotransferase-class-IV
MKQYYWYKGKLVNSSQIQISLDNPGLLYGATVFTTLRVYEHNLDHHLTDWSSHCERIKNSLNFFGWNQPDWKQVRNGAKLLQEYFPVLRITIFPDGGELITGRVLPQNLPQMQTDGIAARMVDGSLYRSFPQHKTGNYLAAWWAKISVCNSQPNCQEAILIDEVGNWLETSTGNLWGWGQGCWWTPPLTGKILPGIGRSHIYSYLQTQNQTIRENPWTPEIINQLETLAYTNSVVEIIPIHTVIHPCQQLQYNPHHASLEILRRFFTTST
>NZ_AP018254.1|WP_096619915.1|88830_90675_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MNNKRWRNAGLYALLFIVVIALGTAFFDKQAPSRETWRYSEFIQQVENNKVAQVRLSADRSTAIAKTESGNQVFVNLIEDDPTLIDTLTKHGVDISVLPPSDEGAWFKVLSSFFFPVLLLVGLFFLLRRAQSGPGSQAMNFGKSRARVQMEPQTQVTFGDVAGIDQAKLELNEVVDFLKNADRFTAVGAKIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKSNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAALLRPGRFDRQVVVDRPDYSGRVEILRVHARGKTLAKDVDIERIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEINDAIDRVLAGPEKKDRVMSDRRKKLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMDSGLFSRSYLENQMAVALGGRIAEELVFGEEEVTTGASGDLQQVARVAKQMVTRYGMSDRLGQVALGRQQGNMFLGRDIMSERDFSEETAAAIDEEVRKLVDIAYNRAKEVLVKNRHILDKLAEMLVEKETVDAEELQELLASNDVQTASFA
>NZ_AP018254.1|WP_096619917.1|90910_91123_-|hypothetical-protein
MNNEKTLDRKQFVGNLKQGVWFFGVSSWMFGITDRSIASFADGYLSALDLTQLFTAATFFVAWLFLKPVK

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Crispr_ID: NZ_AP018254_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_2

264811-264919

Orphan

Consensus_repeat	Method
CCGTCGGAAAATACTCACTACTACTTTGGTTTCATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_2

>merge|NZ_AP018254|2|264811-264919|CRISPRCasFinder
CCGTCGGAAAATACTCACTACTACTTTGGTTTCATCGCTGCTCTTCCCCTATCGCACTACGGGTGGGGAGAGCCGTCGGAAAATACTCACTACTACTTTGGTTTCATCG

>NZ_AP018254|2|2|264811-264919|CRISPRCasFinder
CCGTCGGAAAATACTCACTACTACTTTGGTTTCATCG	CTGCTCTTCCCCTATCGCACTACGGGTGGGGAGAG
CCGTCGGAAAATACTCACTACTACTTTGGTTTCATCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780612.1\|267128_267284_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620068.1\|261759_262503_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275319
NZ_AP018254.1\|WP_096620079.1\|274237_275251_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|235124
NZ_AP018254.1\|WP_096620080.1\|275393_275651_+\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|274017
NZ_AP018254.1\|WP_096620065.1\|254722_255895_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270690
NZ_AP018254.1\|WP_172892736.1\|256049_256313_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620067.1\|258130_258790_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_AP018254.1\|WP_096625777.1\|259531_259930_+\|photosystem-II-protein-Psb27	unknown	unknown	gnl\|CDD\|274406
NZ_AP018254.1\|WP_096620072.1\|267298_267835_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620075.1\|270509_271103_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP018254.1\|WP_172892737.1\|260145_261615_+\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_AP018254.1\|WP_096620066.1\|256783_257050_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620077.1\|272605_273196_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_AP018254.1\|WP_157780613.1\|273349_273571_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620069.1\|262794_263127_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620074.1\|269357_270029_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018254.1\|WP_096620076.1\|271076_272303_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|272992
NZ_AP018254.1\|WP_096620071.1\|265053_266997_-\|sulfite-reductase,-ferredoxin-dependent	unknown	unknown	gnl\|CDD\|131097
NZ_AP018254.1\|WP_096620070.1\|263462_263894_+\|low-molecular-weight-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223471
NZ_AP018254.1\|WP_096625781.1\|264231_264810_-\|DUF2459-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620068.1\|261759_262503_+\|hypothetical-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	8.58735e-06
NZ_AP018254.1\|WP_096620080.1\|275393_275651_+\|glutaredoxin-3	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	5.17474e-41
NZ_AP018254.1\|WP_096620065.1\|254722_255895_-\|phosphotransferase	gnl\|CDD\|270690	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family. This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	6.73447e-12
NZ_AP018254.1\|WP_096625777.1\|259531_259930_+\|photosystem-II-protein-Psb27	gnl\|CDD\|274406	TIGR03044, possible_photosystem_II_Psb27_protein, photosystem II protein Psb27. Members of this family are the Psb27 protein of the cyanobacterial photosynthetic supracomplex, photosystem II. Although most protein components of both cyanobacterial and chloroplast versions of photosystem II are closely related and described together by single models, this family is strictly bacterial. Some uncharacterized proteins with highly divergent sequences, from Arabidopsis, score between trusted and noise cutoffs for this model but are not at this time assigned as functionally equivalent photosystem II proteins. [Energy metabolism, Photosynthesis].	2.2908e-66
NZ_AP018254.1\|WP_096620067.1\|258130_258790_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	3.32157e-68
NZ_AP018254.1\|WP_172892737.1\|260145_261615_+\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	9.67038e-12
NZ_AP018254.1\|WP_096620075.1\|270509_271103_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.58402e-13
NZ_AP018254.1\|WP_096620077.1\|272605_273196_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	8.34706e-27
NZ_AP018254.1\|WP_096620074.1\|269357_270029_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.06329e-11
NZ_AP018254.1\|WP_096620076.1\|271076_272303_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	7.69091e-174
NZ_AP018254.1\|WP_096620071.1\|265053_266997_-\|sulfite-reductase,-ferredoxin-dependent	gnl\|CDD\|131097	TIGR02042, Sulfite_reductase, ferredoxin-sulfite reductase. Distantly related to the iron-sulfur hemoprotein of sulfite reductase (NADPH) found in Proteobacteria and Eubacteria, sulfite reductase (ferredoxin) is a cyanobacterial and plant monomeric enzyme that also catalyzes the reduction of sulfite to sulfide. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_AP018254.1\|WP_096620070.1\|263462_263894_+\|low-molecular-weight-phosphatase-family-protein	gnl\|CDD\|223471	COG0394, Wzb, Protein-tyrosine-phosphatase [Signal transduction mechanisms].	3.57376e-23
NZ_AP018254.1\|WP_096620079.1\|274237_275251_+\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	2.49217e-10

>NZ_AP018254.1|WP_096625781.1|264231_264810_-|DUF2459-domain-containing-protein
MSLFFLVILAIIGLIAGILLASPAIIIPPVEPVQPVTAYVVDVGLHARLVLPDEEGGLVQYAYGDWHYFALHQQDWGSGIAALLIPTQGTLGRRKYQDIAEFKQGIGNHITVLNFAVSGVQAKKLQKSLEQRFQQNMNTQVFNPVNQMNFVKDDMEYTIYHNSNHELVVWLEDLDCRVEGFVLLANFQVKSS
>NZ_AP018254.1|WP_096620070.1|263462_263894_+|low-molecular-weight-phosphatase-family-protein
MDKILFLCTGNYYRSRFAEHLFNYYAHKQELDWFADSRGLAIERGINNVGAISIYAKNALQERGIIITEDERFPTAVTLADFHSASRVIALDESEHRPLMSDRFPEWEDKIEYWLVHDVDKTVATTALGQIEQQVLLLLRQLG
>NZ_AP018254.1|WP_096620069.1|262794_263127_+|hypothetical-protein
MLKRYYLLGLTALGLIIPSVALADPNSVVIQTIPVEQTGNSPDCMNTTNTDLFSNMPTTTTISINKQTQSISGRHSSAEVYQSSVSTNSGRVVQNDTLCVFPFGVPGLPR
>NZ_AP018254.1|WP_096620068.1|261759_262503_+|hypothetical-protein
MVLRRYLLIGVCLGSLMAACQPESSPVSESTTSTATPTPDATIPNAPAPTITLKVPSDSPPTTPAPITVTPTPTPNPNISTPQPTTPATPTPQPSPQIISKAGNIYQNPDLGIKFEYPPDYVVQVNQPQKSVDIWQSQDYQAFKAGKFDNSAPPGNLNITVEDNLQKLPVNEWIAQNPTFDSPGNFSPKTVAGLQAVAFRSVGLLEFEHIVIPIEDGSRMIVISHPEGEEHQQAFQRVVSTLQISRK
>NZ_AP018254.1|WP_172892737.1|260145_261615_+|family-10-glycosylhydrolase
MVKKSRLGWHILFGFISFLLVPWIDNTSSSAQAVNEFCQLSPAAVREKENLRIASFKGDKSAQSRYQNLLKQHAQIIRDCRRRTWPQNQAVWLRLYPCDIAGGAIEQIMDRVVNQGYNQVYVETFYDGRVLLPLRSNPTVWPSVIQTAGAEHVDLLATAIQRGRERGLKVYSWMYTTNFGFSYAQREDREDVIARNGKGQTSLYVVDNGTQVFIDPYHPQARRDYYLMVQEVLRRRPDGILFDYIRYPRQAGTNSIATRVTDLWLYSPATQQALLQRVQNRKGWELVRRFLAQGYVSASDINQVDQLFPQEGEPMWQGRTQNSSKALTNAQRQPQLQWDLWQLSVAHTMQGIVDFLEMAAYPAQQLGIPAGAVFFPYGNQIVGRGYDSRLQPWDRFPRNLEFHAMSYANCGSHTCITDEVQRVVNTVRPGTKVIPAIAGNWGTSIGNRPPLEVQMRALRRYANRIEGISHFAYSWQFPQHDRDRKFCRI
>NZ_AP018254.1|WP_096625777.1|259531_259930_+|photosystem-II-protein-Psb27
MKRYFSRLLALVLVVVVGLMGCSSDPTALTGDYRQDTLAVVNILRSAIELPNDAPNKAAIQAEARKKINDFAARYQRDGSVANLNSFTTMRTALNSLAGHYSSYPNRPVPEKLKTRLEQEFKQVENALQRGA
>NZ_AP018254.1|WP_096620067.1|258130_258790_+|NAD(P)H-dependent-oxidoreductase
MTTAVSAADTVLQQLKWRYATKKFDPSKKIPDDIWKVLEQSLVLAPSSFGLQPWKFFVVRNPEIRQALLPHSWGQKQVVDASHLVVFAIKKDVDDADVDRYVRRMAEVQGVPVENLEKFAQVVKGFLNNPPYPLDKNEWSARQVYIALAQFMTTAAMLGVDTCPMEGFVPDQYNQVLGLTAQGYSAVVVCPAGYRASDDPQAQRPKVRYKTEDVVDYID
>NZ_AP018254.1|WP_096620066.1|256783_257050_-|hypothetical-protein
MASIKVAELRPAGSELFQDSESFMNELNEMDTLSVHGGYDSGYGVFTNYLFLGYKDHLAYDINKYAIGVIAGLASKFNFSGYYYPSYY
>NZ_AP018254.1|WP_172892736.1|256049_256313_-|hypothetical-protein
MNMARIEVQDLHILRSDAKSFINEISDLDASHIHGGRNRLGRREIFLLNLFSIWMEGFITLAAMDYIFRLASNFSPTNSPRRRFPFP
>NZ_AP018254.1|WP_096620065.1|254722_255895_-|phosphotransferase
MIKFTLSSQNLDEYLIEKNICTPSELTNIDIQQKKAKNFNLLVSFNTGRKLLVKQEPINREGKTLGEFHREWLIHNFCQKFSETAEIRNWISEALYFDQENSIIIFNYLQNYRDVSTFYLDENKFPTEIAASIGWALAAIHRRTFTNQTYQNFFAENSIEGVKNFNTDLCRDLERITPEVFGSIPDEGIRFFSLYQKFDSLGKAIAELREAFLPCCLAHNDLKLNNILLADNWQEITPENESIVRIIDWERSSWGDPAFDLGTIVANYLQIWLFSLVVSSSMAIEESLKLATIPLEQLQPSIAALAVAYFSNFPEIVECRPHFLNRVIQFTGLNLIQSIQAMIQHQKTFGNPGICMLQVAKSLICRPEESVSTVFSSAAVELAEKSYSRV
>NZ_AP018254.1|WP_096620071.1|265053_266997_-|sulfite-reductase,-ferredoxin-dependent
MVNSAPPAPTRKPSKVEGIKERSNFLREPVATELLQDTNHFSEEAVQILKFHGSYQQDNRDNRVKGQEKDYQMMLRTRNPGGFIPPQLYLALDRLADEYGNGTLRATTRQGFQLHGILKQNLKATIATIVHNLGSTLGACGDLNRNVMAPPAPFKTKPEYNYAWEYANNIADLLTPQTGAYYEIWLDGEKVVSAEENPAVKAARQQNGTGTIIHNSEEPIYGTHYMPRKFKIAVTVPGDNSIDLYTQDLTLVVITDSDGKLEGFNVFAGGGLGRTHNKEETFARVADPICYVDQADVYSLVKAIVATQRDYGDRTDRRHARLKYLIHDWGVSKFKHQVEAFFGKPLQPFRTLPAFKYEDFLGWNKQGDGKLFLGISIVNGRIKDEGSLQLKTALREIIEKYELPMRVTPHQNVLLYDIPPKHKSAIQAILDRCGVIADPSKIDSLVRYSMACPALPTCGLAITESERAIPDVLERIRTLLNKLGLKKEHFVIRMTGCPNGCARPYMAELGFVGSSPESYQVWLGGCPHQTRLAQPYTDKMHINDLESLLEPLFVFFKKSRQKGESFGDFCARVGLDTLREFASNYHPKSDKNNMLAGKVHYRVGIRDALYSELKAASARQGKSMTDIAEVAIRTYLQNLEDANNVHD
>NZ_AP018254.1|WP_157780612.1|267128_267284_+|hypothetical-protein
MISCNPVGIKQNILILPRQKAGLIEKQPSDMPKALSFADRNLINKNHLFRE
>NZ_AP018254.1|WP_096620072.1|267298_267835_-|hypothetical-protein
MKGLLKNFVAISALSSLAVMPLFLNAGEAAASPRKGTDASYIGAGFSAGVTNGGQDGDAATFGGNIHGRLKLGNTPFSARGQINFSDETSAIIPHVTVDVPIGGRTNAFVGAGYQFVEKDGRPTPSGNKDSVAVVAGVESQVSNNVLLYSNVTSGINAYRNSSASSVSINGGVGFKFR
>NZ_AP018254.1|WP_096620074.1|269357_270029_-|GNAT-family-N-acetyltransferase
MTNGLTTRTATNADIPFLARIEYEASLPPLNRCFWEDLLEDTQTSALALIEAVMRAGASNWGEVTDFLILEENGKPVAAAAGYEPNQEDYCPLRISRLAKVAQELNWSEETMAIFRDRYELLWGGNYRPFFLTPHAPWIIENVAVLPEARGRGLGKILLKALLEKGRSQHYTHAGIMVINGNEIARRTYESIGFKPYQTFYGDYFSEQFNIPFPGVTKFGFCY
>NZ_AP018254.1|WP_096620075.1|270509_271103_+|TetR/AcrR-family-transcriptional-regulator
MSSKLTKAEQTLRTRRAIIERSRYLFATKGYAATGTEEIIEGLGITRGALYHQFGDKLGVFKAVVAEAYDEMTDYIGHKIEGLEDSWEQLVVGCQAFLEIAQRGDLQRIVYIEAPAVLAADTLVEFDQYGFGLLHQGIQVVVEEGKLHTIDVEGFAHLVNGALNELAIWVAKSKDRERLKTAQALVEALLNSHRTTS
>NZ_AP018254.1|WP_096620076.1|271076_272303_-|NAD(P)/FAD-dependent-oxidoreductase
MGTLQIIVIGGGAAGFFGAIAAAKSHPHPQVTILEASPQVLGKVRISGGGRCNVTHACFEPKLLVQNYPRGNKALLGAFSRFQAQDTVTWFQKHGVHLKTEADGRMFPITDTSETITSCLVNAANAAKIKIQTRTPVNRVTYHRGKYEITLKSGEKQECDRLLMATGSNPIGYQIAQSLGHTIISPVPSLFTFNVRDTQLNQLAGISLPNVKIKLSVPDHPGLEQTGAFLITHWGFSGPVILKLSAWGARILHQHRYQAKLQINFLPHLSPEEIRQQLIQTKEEVPRKTMFLYRGVEIPHRLWQYLLSRANIQEQVRWAEVSKRQINQLITELTQGQYLVSGKGVFKDEFVTCGGVDLKEINFKTMESKISPGLYFAGEILDIDGITGGFNFQSAWTTGYLAGCAMAI
>NZ_AP018254.1|WP_096620077.1|272605_273196_-|flavodoxin-family-protein
MSNIAIVYFSGSGHTHLMAEAIATGANQVPSTQVELLRIQGEDITNGRWRNDEYMAKLNQADGIIFGSPTYMGGVAAQFKAFIDAASEAWFQQAWKDKIAGGFTHSSSQSGDKQGTLLYMAINAAQHSMIWVNAGDMPSHYLGKDDGVNRLGSFMGVMGYTPMDTNGKPAEIYEGDRLTAINYGKRIAEIVQRFQK
>NZ_AP018254.1|WP_157780613.1|273349_273571_+|hypothetical-protein
MNGICKIGKDICNHFTGYKGKIKNAIADSVKTQLSSTQVKDKMASVTKQGLSSLNLPPIKSVKMEGGFVKVTY
>NZ_AP018254.1|WP_096620079.1|274237_275251_+|PEP-CTERM-sorting-domain-containing-protein
MKKSIYLKTIVGLTAVSVSLLNVNPAMAKNGNGNGNGNKASTTTSSSTPSTTTSTTTTSTPSTTTSTTTTSTSSGAKCSLTDIIFAGISATSCYNASGNDTGTVDLTKSLSSSFNLGSGLNWSLQGKSDGSSNIGFTAQQDQTSGSLSFTDLFTSGHTDGLSTFVITLKAANSYAAYLFENVNLSSLSSLTGTFNTIGTSVNGRGNAQALSHASIFVANYTPYVAPPKPPEPPVAQPPVAQPPVAQPPVAQPPVAQPPVEQPPVAQPPVEQPPVEQPPAPIVPEQPSSPPPSTTVVNPKNPVQKVPEPATTAALGLMALGALKMKKKLNLENSQVAE
>NZ_AP018254.1|WP_096620080.1|275393_275651_+|glutaredoxin-3
MTSRVEIYTWSSCPFCIRAKNLLKRKGVDFIEYGIDGDEEARNAMAIRANGRRSLPQIFINDVHVGGCDDIYALDAQGKLDMMLV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP018254_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_3

272500-272601

Orphan

Consensus_repeat	Method
CTACTAAAAAACTTTTACAGCAGACCCTTGTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_3

>merge|NZ_AP018254|3|272500-272601|CRISPRCasFinder
CTACTAAAAAACTTTTACAGCAGACCCTTGTCAAAATATTCCCTACCCCCTACTCCCCATTCCCTACCTCTACTAAAAAACTTTTACAGCAGACCCTTGTCA

>NZ_AP018254|3|3|272500-272601|CRISPRCasFinder
CTACTAAAAAACTTTTACAGCAGACCCTTGTCA	AAATATTCCCTACCCCCTACTCCCCATTCCCTACCT
CTACTAAAAAACTTTTACAGCAGACCCTTGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780612.1\|267128_267284_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620068.1\|261759_262503_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275319
NZ_AP018254.1\|WP_096620080.1\|275393_275651_+\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|274017
NZ_AP018254.1\|WP_096620079.1\|274237_275251_+\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|235124
NZ_AP018254.1\|WP_096620069.1\|262794_263127_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780613.1\|273349_273571_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780614.1\|276955_277267_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620075.1\|270509_271103_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_AP018254.1\|WP_096620083.1\|277343_278789_+\|carotenoid-oxygenase-family-protein	unknown	unknown	gnl\|CDD\|226196
NZ_AP018254.1\|WP_096620077.1\|272605_273196_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_AP018254.1\|WP_096620085.1\|280130_280736_+\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|224001
NZ_AP018254.1\|WP_096620081.1\|275918_276884_+\|glutathione-synthase	unknown	unknown	gnl\|CDD\|235371
NZ_AP018254.1\|WP_096620072.1\|267298_267835_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620074.1\|269357_270029_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP018254.1\|WP_096620084.1\|278914_280084_+\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NZ_AP018254.1\|WP_096620076.1\|271076_272303_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|272992
NZ_AP018254.1\|WP_157780615.1\|280908_283125_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_AP018254.1\|WP_096620071.1\|265053_266997_-\|sulfite-reductase,-ferredoxin-dependent	unknown	unknown	gnl\|CDD\|131097
NZ_AP018254.1\|WP_096620070.1\|263462_263894_+\|low-molecular-weight-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223471
NZ_AP018254.1\|WP_096625781.1\|264231_264810_-\|DUF2459-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620068.1\|261759_262503_+\|hypothetical-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	8.58735e-06
NZ_AP018254.1\|WP_096620080.1\|275393_275651_+\|glutaredoxin-3	gnl\|CDD\|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	5.17474e-41
NZ_AP018254.1\|WP_096620079.1\|274237_275251_+\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	2.49217e-10
NZ_AP018254.1\|WP_096620081.1\|275918_276884_+\|glutathione-synthase	gnl\|CDD\|235371	PRK05246, PRK05246, glutathione synthetase; Provisional.	5.78969e-174
NZ_AP018254.1\|WP_096620083.1\|277343_278789_+\|carotenoid-oxygenase-family-protein	gnl\|CDD\|226196	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.12759e-175
NZ_AP018254.1\|WP_096620077.1\|272605_273196_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	8.34706e-27
NZ_AP018254.1\|WP_096620085.1\|280130_280736_+\|triacylglycerol-lipase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	2.54028e-29
NZ_AP018254.1\|WP_096620075.1\|270509_271103_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.58402e-13
NZ_AP018254.1\|WP_096620074.1\|269357_270029_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.06329e-11
NZ_AP018254.1\|WP_096620084.1\|278914_280084_+\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	1.37585e-82
NZ_AP018254.1\|WP_096620076.1\|271076_272303_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	7.69091e-174
NZ_AP018254.1\|WP_157780615.1\|280908_283125_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.53027e-58
NZ_AP018254.1\|WP_096620071.1\|265053_266997_-\|sulfite-reductase,-ferredoxin-dependent	gnl\|CDD\|131097	TIGR02042, Sulfite_reductase, ferredoxin-sulfite reductase. Distantly related to the iron-sulfur hemoprotein of sulfite reductase (NADPH) found in Proteobacteria and Eubacteria, sulfite reductase (ferredoxin) is a cyanobacterial and plant monomeric enzyme that also catalyzes the reduction of sulfite to sulfide. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_AP018254.1\|WP_096620070.1\|263462_263894_+\|low-molecular-weight-phosphatase-family-protein	gnl\|CDD\|223471	COG0394, Wzb, Protein-tyrosine-phosphatase [Signal transduction mechanisms].	3.57376e-23

>NZ_AP018254.1|WP_096620076.1|271076_272303_-|NAD(P)/FAD-dependent-oxidoreductase
MGTLQIIVIGGGAAGFFGAIAAAKSHPHPQVTILEASPQVLGKVRISGGGRCNVTHACFEPKLLVQNYPRGNKALLGAFSRFQAQDTVTWFQKHGVHLKTEADGRMFPITDTSETITSCLVNAANAAKIKIQTRTPVNRVTYHRGKYEITLKSGEKQECDRLLMATGSNPIGYQIAQSLGHTIISPVPSLFTFNVRDTQLNQLAGISLPNVKIKLSVPDHPGLEQTGAFLITHWGFSGPVILKLSAWGARILHQHRYQAKLQINFLPHLSPEEIRQQLIQTKEEVPRKTMFLYRGVEIPHRLWQYLLSRANIQEQVRWAEVSKRQINQLITELTQGQYLVSGKGVFKDEFVTCGGVDLKEINFKTMESKISPGLYFAGEILDIDGITGGFNFQSAWTTGYLAGCAMAI
>NZ_AP018254.1|WP_096620075.1|270509_271103_+|TetR/AcrR-family-transcriptional-regulator
MSSKLTKAEQTLRTRRAIIERSRYLFATKGYAATGTEEIIEGLGITRGALYHQFGDKLGVFKAVVAEAYDEMTDYIGHKIEGLEDSWEQLVVGCQAFLEIAQRGDLQRIVYIEAPAVLAADTLVEFDQYGFGLLHQGIQVVVEEGKLHTIDVEGFAHLVNGALNELAIWVAKSKDRERLKTAQALVEALLNSHRTTS
>NZ_AP018254.1|WP_096620074.1|269357_270029_-|GNAT-family-N-acetyltransferase
MTNGLTTRTATNADIPFLARIEYEASLPPLNRCFWEDLLEDTQTSALALIEAVMRAGASNWGEVTDFLILEENGKPVAAAAGYEPNQEDYCPLRISRLAKVAQELNWSEETMAIFRDRYELLWGGNYRPFFLTPHAPWIIENVAVLPEARGRGLGKILLKALLEKGRSQHYTHAGIMVINGNEIARRTYESIGFKPYQTFYGDYFSEQFNIPFPGVTKFGFCY
>NZ_AP018254.1|WP_096620072.1|267298_267835_-|hypothetical-protein
MKGLLKNFVAISALSSLAVMPLFLNAGEAAASPRKGTDASYIGAGFSAGVTNGGQDGDAATFGGNIHGRLKLGNTPFSARGQINFSDETSAIIPHVTVDVPIGGRTNAFVGAGYQFVEKDGRPTPSGNKDSVAVVAGVESQVSNNVLLYSNVTSGINAYRNSSASSVSINGGVGFKFR
>NZ_AP018254.1|WP_157780612.1|267128_267284_+|hypothetical-protein
MISCNPVGIKQNILILPRQKAGLIEKQPSDMPKALSFADRNLINKNHLFRE
>NZ_AP018254.1|WP_096620071.1|265053_266997_-|sulfite-reductase,-ferredoxin-dependent
MVNSAPPAPTRKPSKVEGIKERSNFLREPVATELLQDTNHFSEEAVQILKFHGSYQQDNRDNRVKGQEKDYQMMLRTRNPGGFIPPQLYLALDRLADEYGNGTLRATTRQGFQLHGILKQNLKATIATIVHNLGSTLGACGDLNRNVMAPPAPFKTKPEYNYAWEYANNIADLLTPQTGAYYEIWLDGEKVVSAEENPAVKAARQQNGTGTIIHNSEEPIYGTHYMPRKFKIAVTVPGDNSIDLYTQDLTLVVITDSDGKLEGFNVFAGGGLGRTHNKEETFARVADPICYVDQADVYSLVKAIVATQRDYGDRTDRRHARLKYLIHDWGVSKFKHQVEAFFGKPLQPFRTLPAFKYEDFLGWNKQGDGKLFLGISIVNGRIKDEGSLQLKTALREIIEKYELPMRVTPHQNVLLYDIPPKHKSAIQAILDRCGVIADPSKIDSLVRYSMACPALPTCGLAITESERAIPDVLERIRTLLNKLGLKKEHFVIRMTGCPNGCARPYMAELGFVGSSPESYQVWLGGCPHQTRLAQPYTDKMHINDLESLLEPLFVFFKKSRQKGESFGDFCARVGLDTLREFASNYHPKSDKNNMLAGKVHYRVGIRDALYSELKAASARQGKSMTDIAEVAIRTYLQNLEDANNVHD
>NZ_AP018254.1|WP_096625781.1|264231_264810_-|DUF2459-domain-containing-protein
MSLFFLVILAIIGLIAGILLASPAIIIPPVEPVQPVTAYVVDVGLHARLVLPDEEGGLVQYAYGDWHYFALHQQDWGSGIAALLIPTQGTLGRRKYQDIAEFKQGIGNHITVLNFAVSGVQAKKLQKSLEQRFQQNMNTQVFNPVNQMNFVKDDMEYTIYHNSNHELVVWLEDLDCRVEGFVLLANFQVKSS
>NZ_AP018254.1|WP_096620070.1|263462_263894_+|low-molecular-weight-phosphatase-family-protein
MDKILFLCTGNYYRSRFAEHLFNYYAHKQELDWFADSRGLAIERGINNVGAISIYAKNALQERGIIITEDERFPTAVTLADFHSASRVIALDESEHRPLMSDRFPEWEDKIEYWLVHDVDKTVATTALGQIEQQVLLLLRQLG
>NZ_AP018254.1|WP_096620069.1|262794_263127_+|hypothetical-protein
MLKRYYLLGLTALGLIIPSVALADPNSVVIQTIPVEQTGNSPDCMNTTNTDLFSNMPTTTTISINKQTQSISGRHSSAEVYQSSVSTNSGRVVQNDTLCVFPFGVPGLPR
>NZ_AP018254.1|WP_096620068.1|261759_262503_+|hypothetical-protein
MVLRRYLLIGVCLGSLMAACQPESSPVSESTTSTATPTPDATIPNAPAPTITLKVPSDSPPTTPAPITVTPTPTPNPNISTPQPTTPATPTPQPSPQIISKAGNIYQNPDLGIKFEYPPDYVVQVNQPQKSVDIWQSQDYQAFKAGKFDNSAPPGNLNITVEDNLQKLPVNEWIAQNPTFDSPGNFSPKTVAGLQAVAFRSVGLLEFEHIVIPIEDGSRMIVISHPEGEEHQQAFQRVVSTLQISRK
>NZ_AP018254.1|WP_096620077.1|272605_273196_-|flavodoxin-family-protein
MSNIAIVYFSGSGHTHLMAEAIATGANQVPSTQVELLRIQGEDITNGRWRNDEYMAKLNQADGIIFGSPTYMGGVAAQFKAFIDAASEAWFQQAWKDKIAGGFTHSSSQSGDKQGTLLYMAINAAQHSMIWVNAGDMPSHYLGKDDGVNRLGSFMGVMGYTPMDTNGKPAEIYEGDRLTAINYGKRIAEIVQRFQK
>NZ_AP018254.1|WP_157780613.1|273349_273571_+|hypothetical-protein
MNGICKIGKDICNHFTGYKGKIKNAIADSVKTQLSSTQVKDKMASVTKQGLSSLNLPPIKSVKMEGGFVKVTY
>NZ_AP018254.1|WP_096620079.1|274237_275251_+|PEP-CTERM-sorting-domain-containing-protein
MKKSIYLKTIVGLTAVSVSLLNVNPAMAKNGNGNGNGNKASTTTSSSTPSTTTSTTTTSTPSTTTSTTTTSTSSGAKCSLTDIIFAGISATSCYNASGNDTGTVDLTKSLSSSFNLGSGLNWSLQGKSDGSSNIGFTAQQDQTSGSLSFTDLFTSGHTDGLSTFVITLKAANSYAAYLFENVNLSSLSSLTGTFNTIGTSVNGRGNAQALSHASIFVANYTPYVAPPKPPEPPVAQPPVAQPPVAQPPVAQPPVAQPPVEQPPVAQPPVEQPPVEQPPAPIVPEQPSSPPPSTTVVNPKNPVQKVPEPATTAALGLMALGALKMKKKLNLENSQVAE
>NZ_AP018254.1|WP_096620080.1|275393_275651_+|glutaredoxin-3
MTSRVEIYTWSSCPFCIRAKNLLKRKGVDFIEYGIDGDEEARNAMAIRANGRRSLPQIFINDVHVGGCDDIYALDAQGKLDMMLV
>NZ_AP018254.1|WP_096620081.1|275918_276884_+|glutathione-synthase
MKLAFIIDPIHKLDPCHDTSVALMEAAHVLGHEVWITQAEYLSVINNQAYAYVQRAELTPIELVDDRWIAVADWYRLSPQEFTPLANFDAVFMRTDPPVNIPYLFATYILDYIDPNQTLVINHPQGIRAANEKMYALQFTQAIPETIVSADKKVIREFLEAKGAAILKPLGNKAGEGILFLQPGDRNFNSILELSTHQGSVPVMVQEYLPAAKDGDKRIILLNGEPIGAINRLSSGADFRNNMATGGTVAATEITEREYEICSQLAPKLREDGLIFVGIDVIGGYLTEVNVTSPTGIREIDRFNGVRLGQKVIEWINSQIK
>NZ_AP018254.1|WP_157780614.1|276955_277267_+|hypothetical-protein
MEKVLLSTQTQPLPDAIRWLLCGAAALCWFSMAIFHRLGLIRFCRLRAKYRLIAGIIAIAIAFLGHGLLPIVVIGSLMLVAGLQVVQDILTARPQTRLLEPQI
>NZ_AP018254.1|WP_096620083.1|277343_278789_+|carotenoid-oxygenase-family-protein
MTAISNIQTQTNKWSQAILKPAQEFDSTPLSVISGEIPTGLRGTLYRNGPGCLQRGGVPVGHWFDGDGAILAVNFHRGGVAATYRFVQTQGYQREVAANRYLYGNYGMTAPGNFWQRLFTPVKNTANTSVLALPDKLLALWEAGKPYALDLETLATLGEDDLGALQSQWSYSAHYKRDGKTGEIWNFGLTPGLNSQLRIYRSHPSGKISKAVSHQVGGIPLIHDFVMAGEYLIFLVPPVRLNLWSIMLGQKSYSDALTWQPNQGTQVLVFDRQNLQLVAKSVTDAWFQWHFANGYVDTDGLVRIDFVQYQDFQTNQYLQQVATGNTHTLAVSCLSRVYLQPQTAKVVKVEKILDDHCEFPSVPPVNVGKYSRHTYLSAYRPGTNTQTEIFNAIARFDHKTSGFCIADMGENRYPSEPIFVSNNENPEQGWILTVVYDGNLDSSQVWIYDCDRLQDEPVCRLQLPSFIPPSFHGTWKPVSGI
>NZ_AP018254.1|WP_096620084.1|278914_280084_+|chromate-efflux-transporter
METLPRENKLIELAKLFFKQGIIGFGGPAAHIAMMEEEVVNRRNWLTREHFLDLVGATNLIPGPNSTEMAIHIGYTYAQWPGLIIAGVCFIFPAVLLTGLAAWIYVSFGTLPQVAPLLYGIKPAVLAVIGAAVWRLGKTAFKKRILILIALAVVVAVFMGVNEVLALILGGIGGMVILRSISPPVAAILSPLSSTLVVNVSSSTNPPNYSLWQLGLVFLKIGCVLYGSGYVLVAFLQSELVQGLGWLTQKQLLDAIAIGQFTPGPVLSTATFIGYVIGGLPGAIVATIGIFLPSFVLVALLNPIVPKLRASKYMSAFLDAINASAIALMIAVTIQLGREILFPGNQFDWFASLIFLVSAIIIIRWRLNAAWLVFGGAIFGWVYKMFVAV
>NZ_AP018254.1|WP_096620085.1|280130_280736_+|triacylglycerol-lipase
MPISPSPNPVLLVHGITDTGKVFTKMANQLRLAGFSTHDLDLIPNNGDEPLEVLAKQVQEYCQRSFSHQQKFDIVAFSMGGIVSRYYLQRLGGLDLVERFITISSPHQGTILAYASNKPGCVQMRPNSAFLRDLNSDIDQLKKLDFTSIWTPYDLMILPPRSSKMPFGREIIIPAFTHPWMLTDNRCIQAIINVLKQTRID
>NZ_AP018254.1|WP_157780615.1|280908_283125_-|polysaccharide-biosynthesis-tyrosine-autokinase
MNTSGNPLYPSLVHNNGNNGDNNIPPYGTVMSFTEIVEEDNNIRDFLEVLRRRSLIIVGVSTAVMSGVVGLTLQQETIYEGRFQLLVEPVKDDSLPKITDPNQGSGQKSELDYETQIEVLKSPELMKGIVKQIQVTYPEVDQKTLLGNLTINRVGETKIIEVRYRNTNPDKVKTILDKVSNAYLEYSREDRQSNLKQGLNFVKREQQGVQTRVDRLQRQLQIFRQRNNFIDPDSQQAQIANQIKLLSEQRLNIEQRLAKAQSEYSRLQTVDGAQAVLRDADTYKNIVNQIRQAEAEIAKELTRFREDSIQIEILRERRENLLPLLEQEARRILGIRMAEAATELQTLQRQQQQLLQTQSFLERQIKQLPILAREYTELQQKLKVATESLNRLSETREKLQIEVAQKETQWRIVEEAVQPENPTSPNIPRNVILGLVASTLMGISAALILEKLDTTYHSVDALKEKTKLPLLGTIPFQRKLNSKKRNKRLPGNQQQEDLPLTSLSRRRVGVGNGYGYDESSKFLDALRVLYTNIQLLSCDRPISSLVISSALPGDGKSTLAFHLALTACAMGRRVLLVDANLRRPTIHDLAQTSNLGGLSSLIAGSLPAQEAIVPMPGVTELSILSAGPTPPDPAKLLSSMKMRQLMEEFKRHYDLVIYDTPPLAGLADASLLASATDGMILAVSMEKTDRKILQQTLESLKMSQIPLLGMVANRVKNDLLGDNYYSYHVDVPGIEVEV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP018254_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_4

459474-459554

Orphan

Consensus_repeat	Method
GGATTACTCTTTGTCAGGAGTGTACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_4

>merge|NZ_AP018254|4|459474-459554|CRISPRCasFinder
GGATTACTCTTTGTCAGGAGTGTACACCGCAACAACCCTACCTAATACGATTTGGGATTAATCTTTGTCAGGAGTGTACAC

>NZ_AP018254|4|4|459474-459554|CRISPRCasFinder
GGATTACTCTTTGTCAGGAGTGTACAC	CGCAACAACCCTACCTAATACGATTTG
GGATTAATCTTTGTCAGGAGTGTACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620197.1\|448494_449178_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_AP018254.1\|WP_096625813.1\|464285_464561_-\|DUF1049-domain-containing-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892742.1\|449219_449396_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620204.1\|458472_459441_-\|cobalamin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|377002
NZ_AP018254.1\|WP_096620200.1\|452145_453225_-\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_AP018254.1\|WP_096620206.1\|460658_461072_+\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372980
NZ_AP018254.1\|WP_096620211.1\|468832_470491_-\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_AP018254.1\|WP_096620203.1\|456950_458159_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340833
NZ_AP018254.1\|WP_096620202.1\|454807_455647_+\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_AP018254.1\|WP_096620210.1\|468360_468579_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620199.1\|451075_452020_-\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
NZ_AP018254.1\|WP_096625811.1\|455993_456911_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_AP018254.1\|WP_096620212.1\|471284_472148_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|238182
NZ_AP018254.1\|WP_096620198.1\|449910_450756_-\|glycerol-acyltransferase	unknown	unknown	gnl\|CDD\|153249
NZ_AP018254.1\|WP_096625815.1\|464717_465527_+\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl\|CDD\|378929
NZ_AP018254.1\|WP_096620207.1\|461287_463315_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
NZ_AP018254.1\|WP_096620201.1\|453628_454648_+\|agmatine-deiminase-family-protein	unknown	unknown	gnl\|CDD\|377332
NZ_AP018254.1\|WP_096620208.1\|463913_464282_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620205.1\|459694_460138_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_AP018254.1\|WP_096620209.1\|466134_467697_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620197.1\|448494_449178_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	1.56331e-28
NZ_AP018254.1\|WP_096625815.1\|464717_465527_+\|PD-(D/E)XK-nuclease-family-protein	gnl\|CDD\|378929	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	1.47612e-11
NZ_AP018254.1\|WP_096620204.1\|458472_459441_-\|cobalamin-biosynthesis-protein	gnl\|CDD\|377002	pfam03186, CobD_Cbib, CobD/Cbib protein. This family includes CobD proteins from a number of bacteria, in Salmonella this protein is called Cbib. Salmonella CobD is a different protein. This protein is involved in cobalamin biosynthesis and is probably an enzyme responsible for the conversion of adenosylcobyric acid to adenosylcobinamide or adenosylcobinamide phosphate.	1.30554e-117
NZ_AP018254.1\|WP_096620200.1\|452145_453225_-\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_AP018254.1\|WP_096620206.1\|460658_461072_+\|AbrB-family-transcriptional-regulator	gnl\|CDD\|372980	pfam14250, AbrB-like, AbrB-like transcriptional regulator. This family of DNA-binding proteins is likely to act as a transcriptional regulator. This family does not include E.coli AbrB, which belongs to pfam05145.	1.50627e-38
NZ_AP018254.1\|WP_096620211.1\|468832_470491_-\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.27044e-153
NZ_AP018254.1\|WP_096620203.1\|456950_458159_-\|glycosyltransferase	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	3.93072e-177
NZ_AP018254.1\|WP_096620202.1\|454807_455647_+\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	3.63173e-149
NZ_AP018254.1\|WP_096620199.1\|451075_452020_-\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	8.71834e-156
NZ_AP018254.1\|WP_096625811.1\|455993_456911_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	1.99484e-92
NZ_AP018254.1\|WP_096620212.1\|471284_472148_-\|universal-stress-protein	gnl\|CDD\|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	2.25257e-19
NZ_AP018254.1\|WP_096620198.1\|449910_450756_-\|glycerol-acyltransferase	gnl\|CDD\|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	7.16779e-30
NZ_AP018254.1\|WP_096620207.1\|461287_463315_-\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	2.6217e-109
NZ_AP018254.1\|WP_096620201.1\|453628_454648_+\|agmatine-deiminase-family-protein	gnl\|CDD\|377332	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase. Peptidyl-arginine deiminase (PAD) enzymes catalyze the deimination of the guanidino group from carboxy-terminal arginine residues of various peptides to produce ammonia. PAD from Porphyromonas gingivalis (PPAD) appears to be evolutionarily unrelated to mammalian PAD (pfam03068), which is a metalloenzyme. PPAD is thought to belong to the same superfamily as aminotransferase and arginine deiminase, and to form an alpha/beta propeller structure. This family has previously been named PPADH (Porphyromonas peptidyl-arginine deiminase homologs). The predicted catalytic residues in PPAD are Asp130, Asp187, His236, Asp238 and Cys351. These are absolutely conserved with the exception of Asp187 which is absent in two family members. PPAD is also able to catalyze the deimination of free L-arginine, but has primarily peptidyl-arginine specificity. It may have a FMN cofactor.	5.88126e-116
NZ_AP018254.1\|WP_096620205.1\|459694_460138_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	8.4301e-48
NZ_AP018254.1\|WP_096620209.1\|466134_467697_+\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	1.07568e-33

>NZ_AP018254.1|WP_096620204.1|458472_459441_-|cobalamin-biosynthesis-protein
MSYGVLVVVIAAILDYLIADPIGWLHPVQVMGWFISQLSQLAFKYCQTPLTQRIAGILLGLIVIIGSLLISLGITRIAHQLHPRCGIFIESVMLASCFAGKGLRNAANLVISPLIAGDIDQARTILSQYVGRDTENLSSAEIYRAVLETVTENATDGVTAPLFYAIVGLFIPTIGAVPMAFAYKASSTLDSMIGYRQPPYTYLGTFSAKLEDFFTWLPCRFTVLTLGLISLRPLQVWRICQRDAPNDPSPNSGWSECVYAAILGVQVGGKNTYRGVVKEKPLLGDNLRPITSDVINQALDLTRTCVLVWLGLLVIWGVGSRK
>NZ_AP018254.1|WP_096620203.1|456950_458159_-|glycosyltransferase
MPSNYALVHEWLTPKATGGSELVVREILNHIDADLYALIDFESTNPDSYLYQKTIGTTFLQHFPGARQGVQKYLPLLPLAIEQLDLRQYEVILSSSHAVAKGLLTTPDQLHICYCHSPMRYAWDLTFDYLKASRIGRGVPGWFVRMLLHQLRQWDVVSANRVDYFIANSQHTRRRIWRCYHRHAEVIYPPVQVDKFPLVEEKEEFYLTVSRLVSYKQVSLIVNAFNQNQKPLVIIGTGPEMGKIRSIAKSNIQIMGWQPDEVVKQYMGKAKAFVYAACEDFGIALVEAQASGTPVIAYGVGGAAETVRDLRYSPPHTGTGILFSEQTEAALIEAVELFEAHRHQFDPEYARSHAVQFDASCFARNYLEYVDKCKQKQQKFPFSGSFAMLSQNNGCNSIRKKA
>NZ_AP018254.1|WP_096625811.1|455993_456911_-|sugar-transferase
MTAQSSLLSGKRFPKQPNSTADRSTVTDKGGFNQGSASQSLTRAKSGNRRLPSIRRVLTYRRMARWQKPLWIGMSPANWKQGQALSNLKLVPKHPAFPDINGEFAKRLFDIVFSLFVLVVFSPVYLIIALIIALSSPGPIFYVQERVGKNHRRFNCIKFRTMVCNADAVLSEMMENCPHLRAEFEDCFKLKQDPRITPIGRFLRITSLDEFPQFWNVLKGDMSVVGARPLVPEELPKYGHHIDEILTYRPGITGLWQVSGRNDIPYPRRVQIDLHYTRFRTFLLDLQIVIKTIGVVLIPKNNGAY
>NZ_AP018254.1|WP_096620202.1|454807_455647_+|N-carbamoylputrescine-amidase
MKLGIIQSSFAPKTEDNVAKMTIAIRKAAQEGAQVILMPELFANHYFPQRERGEYFALAQPRDDHSFLGVFQELAAELQVVLPVSFFERDRTAYFNSVVVFDADGKDLGVYRKAHIPDGPWYEEKYYFAPGDTGFRCYDTRYGKIGVAICWDQWFPECARAMALMGAGLLLYPSAIGSEPEEAGAINTSALWRRVMVGHAVANSVYIGAANRVGQEGEMDFYGTSFIADYRGEIIADGGGEDNCIITAELDFHAQGEFQAEMGFFRDRRPDLYGSLLGR
>NZ_AP018254.1|WP_096620201.1|453628_454648_+|agmatine-deiminase-family-protein
MPAQWMPHQLTILAFPFQEEEWQGGLLPVRREFMGFLQQIVVDEPVLLIVAPGEEASFTELQGALQLDLAHAGNLRVVTLPLNDVWMRDIAPIHLISKNTQQLIAVKWQFNGWGGKFSHHHDSEVGYQLMELTGVSNFFDVPIILEGGAVEVDGRGNGMTTRSCLLNPNRSGLDEGEFSQIIKDYFGLEKLVWLDQGLVGDHTDGHIDMVARFTPSGHILINHTENPHNPHYQVLQENYQQLSREFDGSCLLCLPLPEQTIEFAVDGDFTELSCANYANFYTTSRSVIVPAFADPADEVAHQIISGCFPNHQVVSLPARSILQYGGGIFNCLAQQVPQG
>NZ_AP018254.1|WP_096620200.1|452145_453225_-|GDP-mannose-4,6-dehydratase
MTQKKRALITGITGQDGSYLSEFLLEQGYEVHGIIRRTSTFNTDRIDHVYEDPHKEGARLFLHYGDLTDGTTLRRILEEVQPVEIYNLGAQSHVRVSFDSPEYTVDSVGMGVLRLLEAIRDYQQRTGIQVRFYQAGSSEMFGLVQAVPQKEDTPFYPRSPYACAKVYGHWQTVNYRESYNLFACNGILFNHESPRRGETFVTRKITMAVARIVAGRQNKLYMGNLDAKRDWGYAKDYVRAMWLMLQQDEPDDYVIATGETHTVREFLDLAFNYVNLNWQDYVEFDERYLRPAEVDLLIGDATKARQKLGWTPSVTFEQLVALMVEADLRALGLSSPNNKLADVVKDNAMVRQELGVLHF
>NZ_AP018254.1|WP_096620199.1|451075_452020_-|GDP-L-fucose-synthase
MSALQLQDKRILVTGGAGFLGRQVIEQLCQAGATRDKITIVRSRDCDLRKMENCQRAADQQDVIIHLAAHVGGIGLNREKPAELFYDNLMMGAQLIHAAYETGVEKFVCVGTICAYPKFTPVPFKEDDIWNGYPEETNAPYGIAKKALLVQLQSYRQQYGCNGIYLLPVNLYGPEDNFDPRSSHVIPALIRKVHEAQVRGDKQLPVWGDGSPTREFLYSEDAARGIVMGTQFYNSSEPVNLGTGYEISIKDLINLICKLMDFDGEIIWETDKPNGQPRRCLDTQRAKKEFGFTAQVGFEEGLKNTIDWWRKNAQ
>NZ_AP018254.1|WP_096620198.1|449910_450756_-|glycerol-acyltransferase
MSIPQNTNATKPGWSLEKRDPEFIKSMLPVMGWLYENYFRVQASGWENIPRNEKILLVGSHSGGLAAPDMLMMMYDWFRIFGVESPVYGLMHPKAWIVDNPISQMAAKSGAIIAHPKMARAAFASGASVLVYPGGAQDVFRPHAMRHQIYFAGRKGFIKLALRENVPIIPIISVGAHDTLFVLADIYPILAQLNSWGIPWLGGFDPEVFPIYLGLPWGLGIGPLPNIPLPSKIYTHVCPGIKFPHYGHQAACDRAYVDECYNLVVETMQAELDKLVAISKL
>NZ_AP018254.1|WP_172892742.1|449219_449396_+|hypothetical-protein
MTDNTTRKGFWQAIIEIPQKVINFISGGVKRIFTPADDNYPEVGPQPFEGEPAEKKNY
>NZ_AP018254.1|WP_096620197.1|448494_449178_+|Hsp20/alpha-crystallin-family-protein
MSLIHWEPLKELNTLRQQMNRLFDEIMHPESTQGIFPKMDNLAWNPAIELKETDQDIILKIQVPGIDAKDLDIQVSENAVAIAGEYEEEKTSDTKGYYRSEFSYGKFQRIVPLPVNVKQEQVAANIKDGIVTLTIPKAEKSPRNVVKVDLSVQEKAREAMAEERLHQEHLQANMQERATEELARNNTEHIDEAARAAMVEKRLHQEHLEETMHTRAAKEVGIDPVAK
>NZ_AP018254.1|WP_096620205.1|459694_460138_-|Rrf2-family-transcriptional-regulator
MKLTTKGHYSVKALLDLSLQVPGVPVTTKAIATRQDIPAPYLEKLLIEMRRAGLVKSIRGSVGGYLLAKPPSQITIGEILEAVGENISHIPQMSHLPHHAEDWVTLSLWRRLNQKLKEALYNITLADLYYDARSWQASLGEEASFII
>NZ_AP018254.1|WP_096620206.1|460658_461072_+|AbrB-family-transcriptional-regulator
MAKQKKIEPLVGEELLKKVKELESLSKEEKAKQCGYYTVTKNGIERVNMMKFLNALIDAEGIQLDTSGGANGRGGRSASYRISVQSNGNLLIGSAYTKQMGLHPGDEFIITLGKKHIRLRQVDSEEREDDETVEATA
>NZ_AP018254.1|WP_096620207.1|461287_463315_-|chloride-channel-protein
MNTLPPDKFRKSNQQIRNSPPLDSVFASLTHFLNRVQISPETVVLVLGVIIGSSTGMGVVTFHYLIQLFSYTLYEQLLLVIGGWGMWTLAVVPVIGGIAVGLMRWRSQDFGPSLSSLIAVSQGNSLQRPLRPVMKMVAAAFSLGSGASLGPEGPSVEIGANFGMLLSQILKVSRERQRLLLGAGAAAGLAAGFNAPIAGVFFALEVVLGATSLATSAVSVVVLAAVLAALIAQIGLGSQPAFALTAYQTRGLLELPLYLGLGLAASQVSLAYTQALKFAKASFAGKVSYLSWLGRIPRYFHPTLGGVIVGVVALQFPQILGIGYSTIQAMLQGMDMSWQLLAGLLICKLLMTAISAGSGFVGGVFAPAMFLGATLGVFYAKVIHLLIPQVSMYMAAPPAYAMVGMAAVLAASVRAPLTSILLLFELTHDYRIVLPLMAAVGLSFWLVETIKPRTDANSNLQQIGLSELGDDHAEIIHQITVAQAMQTNPMILPATMNILETAVEMSRSRIRSALVIDEQKQLIGIISLEDINRYLTIWQENPQPPSIPILKDICTTEIIYAYSDESLFEALNRMTLRGLHQLPVVKRNHHESILGLLERSQIPLACNLTLTRNLLANFPVVVLENEHQNPPLTQLEYQAVEKTNLAEPRIDIHVPELEATNLVLQPNPTPSLDNN
>NZ_AP018254.1|WP_096620208.1|463913_464282_+|hypothetical-protein
MNTHIFDNHYLTCPLCHHHIDSEKVKTCVGLFSCPYCQEKFVISKSGHYVRDPFVFKQVALATTLRRQSHPLARIIRDLLFMQRPVVAFLLGTAVLLGTLTLTQQRTNQDFQPSSNQEQSGK
>NZ_AP018254.1|WP_096625813.1|464285_464561_-|DUF1049-domain-containing-protein
MNSVVGIIISLIVAIWVSAIAIIAFQNPNNVSLKFLGMESIQLPFGVLLSFCASGGMVGMAILELILRASNSRHNLSRDDDPDFFTDDEVY
>NZ_AP018254.1|WP_096625815.1|464717_465527_+|PD-(D/E)XK-nuclease-family-protein
MSNLERPFASYHLWSLVVPNQGQQHWHCQMRRGFMKARQNEPEVQALRSQITAAQQIGLLAQQGVYEFHRNRDLFVVADGVERVASILELDGLSVQVRTRVLNILHRYYTKPILRRKRILLMTRGDEGFPKPIWIIRKNYRFRLYAMMDCVVMEPDNTLHILDFKTGKSPFDQRQALVYLLAARYLYPGYRMIASFYNLENSHKSEVIRVSNRELDQVEGELALIATKHYQDVQKYKNSGQFSQIFPPNPGKHCRYCPFHRICEFAQLD
>NZ_AP018254.1|WP_096620209.1|466134_467697_+|EAL-domain-containing-protein
MTSTPKFHLSFARQQENPSHGSIPGDSTESTNVISVSTNYLHNFLEPYEVFIHKLVKSLQSEGNSSRLTGVLIPEVVLDIVSHISGAEFAFLIRYTEAEEWQILSQSHLSKYNHSDTDLSNFSDDLKNQFLSTIHAEVIFDPACHGTYKFYEQGREYKAFAVIPMQSQVEAIVVGGLPVDSHFLTDIYGRIIASFYQAAANFTSASIFGLEQNLSPVNLANLVEAQILDDLKSNLGFVSPSLYQRRFELFCDRLRQMVVYFEPVLHLDPNDLFICGWEALARNPESLCAPFELFHAAELWGSRFIVELDQHFLKVATSSYRQSRPPKQRRASDMVPLSVNVYPESLMHPEYFQTLHKIIHEGVITPRNLILEISEKTELPQFIDGIKLHNPLQAFKNRLLEFVRTFNIRFAIDDFGVGHASVSRLAGLNASHIKIDREILFHQPSPIIIKFVHELAAANTLSPARVIVEGVDETSPFSLNLLRKMGVTYIQGHLVGKPEPEIYRLSQEKYLELQKRLFSE
>NZ_AP018254.1|WP_096620210.1|468360_468579_+|hypothetical-protein
MNSINFQLMNRTELRKYISKHPEDRQAFHTYMDLLSQEPCLVNGNVNDLQDMQKVTQIIEQVTSIKQGNKNS
>NZ_AP018254.1|WP_096620211.1|468832_470491_-|SulP-family-inorganic-anion-transporter
MSINPINKINFRNWRGDLFGGITAAIVALPLALAFGVASGAGAIAGLHGAIIVGFFAALCGGTPAQVSGPTGPMTVVVTSVIATLVRRYPDTGLAMAFTVIMLGGLLQILFGVMRLGQYITLMSYTVISGFMSGIGVIIILLELPPILGHEGSGGVVTTLQKLPTYISNPNWIAVGLGLLTLVIVFAVPPKLNRVLPSPLLALVVVTIISVILFKDANIARIGEIPRGLPSLKMPTFTLPELDDMLRYGLMLGVLGAIDSLLTSLVADNITRTQHDSDKELIGQGIGNMLAGLFGGLPGAGATMRTVVNVQAGGRTPLSGMIHALVLLLVVFWAGPLTAQIPNAVLAGLLLKVGIDILDWGFIKRAPRLSLKGTGLMYLVLFLTVFVDLITAVLVGAFIANVLTIKRLTDVQSDNIQVITDSTERDKLTPAEQKILTEAKGDILLLKLGGPMSFGAAKSISRRMSFVQNYHVLVLDLTEVPHIGVTAALAIESIVEDAIAHHRHIWIVATSPQVRWRLEQLDLQRFWEVRQGENRCQALESAYNLIQRGSLT
>NZ_AP018254.1|WP_096620212.1|471284_472148_-|universal-stress-protein
MKQILLCTDGSVFSQNSYRYAAWLATRFRAAINVLYVTDMRHQSTEEIGSLRGSMDVNTSDMLMKQLVALEHEKAKLYNQRAKLILQDAEEALTRGGVEAVQTVHKTGFLVDYVPELEPEVDLIVLGKRGETAEFASGHLGSNVERIIRASRKPCLITSRQFQPIERFLLAYDGSKSCQQILQLLQLSPAFQGLEMHIVTVARNREDTTANSHLEFAQAQAILAGFTPITSLMVDNPEHAIADYIEANNIHLLLMGAYGHSRIRHLVIGSTTAQILRSSNIPVLVFR

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Crispr_ID: NZ_AP018254_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_5

518056-518160

Orphan

Consensus_repeat	Method
GCGAAGCGTTGCCACAGGCTATTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_5

>merge|NZ_AP018254|5|518056-518160|CRISPRCasFinder
GCGAAGCGTTGCCACAGGCTATTACAAATTACGAATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTACAAATTACGTACGCGAAGCGTTGCCGCAGGCTATTAC

>NZ_AP018254|5|5|518056-518160|CRISPRCasFinder
GCGAAGCGTTGCCACAGGCTATTAC	AAATTACGAATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTACAAATTACGTAC
GCGAAGCGTTGCCGCAGGCTATTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620251.1\|525249_526197_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566
NZ_AP018254.1\|WP_096620250.1\|523102_523855_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620244.1\|516309_517245_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465
NZ_AP018254.1\|WP_096625823.1\|527814_528249_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625819.1\|515346_515736_+\|STAS-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379507
NZ_AP018254.1\|WP_096620247.1\|520198_520534_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237862
NZ_AP018254.1\|WP_096620252.1\|526928_527654_+\|G-D-S-L-family-lipolytic-protein	unknown	unknown	gnl\|CDD\|238873
NZ_AP018254.1\|WP_096620249.1\|522158_522725_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620248.1\|521428_521968_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_AP018254.1\|WP_096620243.1\|515732_516296_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|366841
NZ_AP018254.1\|WP_096620241.1\|510945_513417_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018254.1\|WP_096620245.1\|519098_519383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620239.1\|506468_508370_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_AP018254.1\|WP_096620246.1\|519385_519697_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620238.1\|504250_505450_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015
NZ_AP018254.1\|WP_096620242.1\|513773_515030_+\|competence/damage-inducible-protein-A	unknown	unknown	gnl\|CDD\|234789
NZ_AP018254.1\|WP_096620240.1\|508617_510762_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173820
NZ_AP018254.1\|WP_096620237.1\|502453_504028_+\|DUF1565-domain-containing-protein	unknown	unknown	gnl\|CDD\|284923
NZ_AP018254.1\|WP_096625821.1\|520888_521257_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620236.1\|500617_501715_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340832

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620251.1\|525249_526197_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.96986e-115
NZ_AP018254.1\|WP_096620244.1\|516309_517245_-\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	3.71012e-174
NZ_AP018254.1\|WP_096625819.1\|515346_515736_+\|STAS-like-domain-containing-protein	gnl\|CDD\|379507	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 99 and 341 amino acids in length. This domain is distantly related to the STAS domain.	6.86367e-12
NZ_AP018254.1\|WP_096620252.1\|526928_527654_+\|G-D-S-L-family-lipolytic-protein	gnl\|CDD\|238873	cd01835, SGNH_hydrolase_like_3, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	1.56775e-75
NZ_AP018254.1\|WP_096620248.1\|521428_521968_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	5.07623e-47
NZ_AP018254.1\|WP_096620243.1\|515732_516296_+\|PIN-domain-containing-protein	gnl\|CDD\|366841	pfam01850, PIN, PIN domain.	2.07456e-06
NZ_AP018254.1\|WP_096620241.1\|510945_513417_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	8.14508e-81
NZ_AP018254.1\|WP_096620247.1\|520198_520534_+\|hypothetical-protein	gnl\|CDD\|237862	PRK14948, PRK14948, DNA polymerase III subunit gamma/tau.	0.0049745
NZ_AP018254.1\|WP_096620239.1\|506468_508370_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_AP018254.1\|WP_096620238.1\|504250_505450_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	5.18667e-138
NZ_AP018254.1\|WP_096620242.1\|513773_515030_+\|competence/damage-inducible-protein-A	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	0
NZ_AP018254.1\|WP_096620240.1\|508617_510762_+\|S8-family-serine-peptidase	gnl\|CDD\|173820	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.54814e-52
NZ_AP018254.1\|WP_096620237.1\|502453_504028_+\|DUF1565-domain-containing-protein	gnl\|CDD\|284923	pfam07602, DUF1565, Protein of unknown function (DUF1565). These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterized domains such as pfam00395 and pfam03422.	2.433e-37
NZ_AP018254.1\|WP_096620236.1\|500617_501715_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340832	cd03802, GT4_AviGT4-like, UDP-Glc:tetrahydrobiopterin alpha-glucosyltransferase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.	2.3486e-153

>NZ_AP018254.1|WP_096620244.1|516309_517245_-|cysteine-synthase-A
MGIAGDVTELIGKTPLVRLNRIPQAQGCVAEIVLKLEGMNPAASVKDRIGANMVLVAEQAGLIAPGKTVLVEPTSGNTGIALAMVAAARGYEIILTMPETMSMERRAMLRAYGAKLELTPGSEGMKGAIKRAEEIVASMPNGYMLQQFKNPANPQIHRQTTAEEIWIDTDGKVDFVVAGVGTGGTITGIAEVLKQRKPSFQAVAVEPVQSPVISGGSPGPHKIQGIGAGFIPDVLRTDLLDEVIQVSDEDAIAYGRKLAREEGLLSGISSGANLAAAIQVGKRPENAGKLIVVIQPSFGERYLSTVMFQDL
>NZ_AP018254.1|WP_096620243.1|515732_516296_+|PIN-domain-containing-protein
MSRTVYPIESYKFTSEDGVLFDANIWMYIYGPPSHISSQYRYAYTSALRRIRGAGCRIVLDALVLSEFINAYARFFYNKLPNDQKPGDFKIFRNSINFKPVAEQIARRAKKILDKSEPAKSHFESKEIISILSEYAGGEADFNDQVLAELCRANDLKLVTHDADFTASNITILTANPRLLSQQQGEG
>NZ_AP018254.1|WP_096625819.1|515346_515736_+|STAS-like-domain-containing-protein
MSLSTLPAPHAENSVTICVTDVLGDVYCVVCEDGKRVYEHIARAFLAGKHVCLSFKNGEEISSAFLAEVFLRLYTSFSEAKIENSLSLVDVEPEDAADIACVIHDVKDYLKDPQRFREAMIEVLGDDLE
>NZ_AP018254.1|WP_096620242.1|513773_515030_+|competence/damage-inducible-protein-A
MSAEIICVGTELLLGDILNSNAQYLAQQLAQLGIPHHFQTVVGDNKDRIKQVIDIAIKRASILIFTGGLGPTPDDLTCETIAEFFHTPLIEHPEIIEDIRAKFAVRGRVMSPSNRKQALIPQGAQILPNPTGTAPGMIWNPRPHLHILTFPGVPSEMHRMWTDTAIPYLCSQGWGTEIIYSRSLRFWGIGESALAEKVSSFFDLTNPTVAPYAGKGEVRLRISAKAKTVADAQALILPVEEEIKQIAGLDFYGVDDDTLATVVGEMLKQRQQTLSVAESCTGGGLGQMLTEISGSSEYFWGGIISYANSVKIQQLGVNPDDIHHYGAVSAEVAKAMAIGVKQRLGTSWGLSITGIAGPTGGTDSKPVGLVYIGLAAPDGSILSQEHRFGSNRDRNFIRFLSANAALDLLRRYLAGKLA
>NZ_AP018254.1|WP_096620241.1|510945_513417_+|CHAT-domain-containing-protein
MFKWNLILIFLPLFLGNSLPGYAQNFISINPREAIYRVSVANNRQQSADTALRKGIELMEKNVFLAAQGELEQALKIYTQNGDKQGQTEALIQLATLNFYQEKFWQAQQFINQAESTIDRTSNNQQRQRLLTIQGLISLETGEYLKGLNYLQRAETGIRDIAASNLNRIGLGMAYRYLGWYQKSQLYLELAVRSPGNQNRRALALNTLGDVLFDLGNYEPAVEKYQQALSTYLSVGNRLGAARAQRNLAKIKLILGQTPAAQKLYAEAEQQAKAIGATGLQVVILNELGLVYLQTGNKTKALENLQQALAITRRERITPVVSLINLGFYYRSQKQYEQAINYYEQGLAWAKKNGDRLNETKALNALGETQLEMKQLPQAIATLQRGISVFESLRPGLRDEQKISLFETQSYAYGLLQTALIAKGDVKTALSVAEKARARAFAEQLAIRLSQSHSTPIDLTIPSGEQIQATAKKLNSTLVIYSIIHNSQGQEQKLFTWVVNPQGEIKFHSQDIHQLNLANITPDTASRDRGLTSLVQQTRNGIVKRNFQEPNSIHGQKSYQILIQPIVNLLPQQTDAKIIFIPQGSLNLVPFAALVDNQGKYLIEKYTISTAPSLQILSLINQKPPHKSPSPPLIIGNPEPMPQDLSPLPGAEAEAKAIAQLLQTSAITGKNATEAEVLAKLPSAGIIHLATHGLFDEKQGLQSALALVSSPGQDGMLTALEVLDLKLQAEMAVLSACDTGRGQITGDGVVGLARAFMVAGVPRVIVSLWAVPDEPTAELMKEFYHQKLNTPDRVTALRQAMLKTMKKYPEPVNWAAFTLIGQH
>NZ_AP018254.1|WP_096620240.1|508617_510762_+|S8-family-serine-peptidase
MKPNLPPIFLISSLFISSFAPLIAIHPAIAQTNPSPSEELFYTFKGEKIRLRQRQDAIAVAFKQVTTRGTSSSSPLIFQLEQDLQKTGVRGGGSKPQVSSLGTNYAIVNIPRGVSVSTIQANIQQQPYVQGTLPVLTRENSQETIVLPQEIILRFAPEMSQRDRDRILAEHDLKLVRSLRYAKNFYLVRPNNSIGTRILGLSEKLGQIRGVSSATPNFIQSVPTSPVRLDSIFGRSRSANKQLKTSKSILPAEDYLGFQWHLDSTPLQQCLQQNASLEQLPDCLKSKSSRDQGKNVSQRTDLRVKEAWVRSPNKGKDVVVAVIDSLIQWNHPDLQANLHTITAADQCPGEKHGWDFSEPPPLNNPNPCAIGDNDTRANPLELTILKRRFQETFQLSDAEFLARYPRYAEAVRGYFPGISPRAAAAKLREYFRLEIGSEYHGTWVSGVIAAKPSTSQGLIGVAPNAKIVPVRVFGLNGSIFIESYLEALAYAAARGADVINLSLGAMMPNDSEQQLIQQILQEKPNLVIVASSGNSNYPQVGFPAGYDGVLSVGASNLQGNRAAYSNYGIGLDVIAPGGDIETPGWFGGIATTGGTWMEAYWQGLPAAQQRWGPVIDNRGRYWWVQGTSFSAPAVSGVVALMKGEDRKKTLNRDRILQILQSTASYQPLTLTPQEVEQYQMLKQRGLVQSAEDAQRFFFGRGLINAEAAVDAVVR
>NZ_AP018254.1|WP_096620239.1|506468_508370_+|molecular-chaperone-DnaK
MAKVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAFAKNGDTLVGQIAKRQAVMNPENTFYSVKRFIGRKYEEVTNETTEVSYKVIRSGDNVKLDCPGAGKQFAPEEISAKVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGIEVLRIINEPTAASLAYGFDKKSNETILVFDLGGGTFDVSILEVGDGVFEVLATSGDTHLGGDDFDKKIVDYLAEEFKKQEGIDLRKDRQALQRLTEAAEKAKIELSSVTQAEINLPFITATQDGPKHLEMVLTRAKFEELCSDLIDRCRVPVENALRDAKLSKDSIDEVVLVGGSTRIPAVQQLVKNMLGKEPNQTVNPDEVVAVGAAIQAGVLAGDVTGILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDGQTNVEIHVLQGEREMAADNKSLGTFRLDGIPPAPRGVPQIEVVFDIDANGILNVTAKDKGTGKEQSISITGASTLDKADVERMVRDAEQNAAADKERREKIDRKNQADSLAYQAEKQIQELGDKVPAADKEKINGLVKELKDAVAKEDDDTIKRLMPELQQALFQVGSNIYQQQGTGDAGTDGSSAGSTGSTSGGDDVIDADFTETK
>NZ_AP018254.1|WP_096620238.1|504250_505450_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MDTSSLFLAADAWRLSLNGESIDLPPSDSGSGVGTDFDRAMMRRCLELALKAKGCTSPNPMVGAVVVRDGKVVGEGFHPKAGEPHAEVFALRSAGELARGATVYVSLEPCNHYGRTPPCSQALVKAGVAKVVVGMVDPNPLVAGGGIKTLRDAGIEVVVGVEEAACRKLNEGFVHRILCQRPLGILKYAMTLDGKIATTTGHSAWVTSPETRKVVHEIRVGCDAVVVGGNTVRKDNPYLTSHQVGKRNPLRVVMSRTLDLPVDAHLWQTEEAATLVLTEPTANSGLRGQLEASGVEVVNLTPLTPGNVMQYFYERGFCNVLWECGGQLAAKAIADGSIQKILAFIAPKIIGGNSHTPTPVGDLGLTQMTQALNLHDITVRAIASDLLIEGYLSPQNNSP
>NZ_AP018254.1|WP_096620237.1|502453_504028_+|DUF1565-domain-containing-protein
MTNTIYVNPVTGNDSGNAGNSPQAPFKTITRALRGAVPGTTIQLSNGTYNTDSGEVYPLTPPEGVKILGNEANKGSGILIQGSGNFLSRTFARQNVTFVLTNRSELRGVTVTNPETRGTGVWIESTAPIVANCTLTKCKREGIFITGEGNPQILHNNLIENDANGIAIANNAKGIIQGNTCLRTGFGIVVNGAATPSLIGNRTTENRTGLIFYDDSRPALRDNISDRNTQDGMTLLGNVQVDFGSTSSPGGNIFRDNGQFDIQNASNNQLVSVGNQVNPSRTRGNIQFVDTQTPTPVPPPNPTPVPIPVPPPNPTPEPAPVPIPVPTPTPTPPSSNLTDISGHWAEKFIRELNQREIIIGFRDRTFKPDATITRAQFAALIVKAFNPRPIRQGKKFRDVSDNFWANEVIQKAYESGFLSGYPDNTFHPNQNIPRVQVIVSLVNGAGVNAAYSQNLTRFDDYTDIPAYAKEQVLIALNNRIIVNYPNLNKLNPNRDATRAEVTVMVYQVLAGQNRVAAISSPYLV
>NZ_AP018254.1|WP_096620236.1|500617_501715_-|glycosyltransferase-family-4-protein
MKIAQIAPPWEQVPPITYGGIELVVSRLTDELVRRGHDVTLFASGDSQTLAKLEAVTPRALRFDREIREPMMYELAETSQVYQRAVEFDIIHSHVGVWSLPLAAMVDTPTVHTLHGRFTRDNSRVFSQHKNQPFISISNAQRQLDLNYVGTVYNGICVEEFPFIEKPQQPPYLAFLGRFSPEKGPQHAIKIAIATGWHLKLAGKVDVVDREFFESEIAPHIDGKQIEFLGELNHTQKAELLGNASATLFPITWDEPFGLVMIESMATGTPVIAMKMGSVPEVIAHGESGFICESYEEMASLIPAALQLDRKKCRSWVVENFSVATMVDGYEAIYEQILKYRHPGNWSLQSLKASLESLMTLKFER
>NZ_AP018254.1|WP_096620245.1|519098_519383_+|hypothetical-protein
MNQTDSQTNPEIPQERLHEYFELIDKLLTCPNGQEPEILEANSTLLDAGLIQTMLRVSAIFAHEGNSDGAEFLVHVARELSKALGFYPDLSVKE
>NZ_AP018254.1|WP_096620246.1|519385_519697_+|hypothetical-protein
MQLSATEAQQIALEFLLQDWNIPDAISDWFVVISSRLMGQYWYIVEIGIAGLPDRWYIQVYDTGECDPNYTFVSPIKSTEIDTDLGEFPAIIAEVLSSERNSR
>NZ_AP018254.1|WP_096620247.1|520198_520534_+|hypothetical-protein
MITEDLLAKEFSRIIKQYYPSMGELLDGCYVKVITSYWGRPPKRLRYVGIYCSEELMPKIQEKKEYLREIAENMGLMQVVFLNATRLLRDPKSRLKQADPRLWLELHYVAA
>NZ_AP018254.1|WP_096625821.1|520888_521257_+|hypothetical-protein
MNKAFLPPDDLPPVQLTPHDKFMRVEFERGIGRCFYQACDQITQALLSNCQWYVTLNANLVTLIIDCPDIVAYWHIVSNIPQLGNHLQRISPEAKIRVYPPTGKGMPFEISVNEISAYRDWL
>NZ_AP018254.1|WP_096620248.1|521428_521968_-|NAD(P)H-dependent-oxidoreductase
MVKIVGIAGSLRTDSYSQVALRLAAQRVSALGAEVEILDLREMNLPFCDGGDEYPDYPDVEKLRKAFHDADGLILVTPEYHGSISGVLKNALDLMSFDQLAGKVAGMISILGGQSNSNALNDLRVIMRWVHSWVIPEQIAIGQAWKAFDQDGKLLDEKLSQRFDQFAQSLVDNTQKLRQ
>NZ_AP018254.1|WP_096620249.1|522158_522725_+|hypothetical-protein
MEVQTSFLLSIGSLTGWLFGHQSLSGMMNILAWVSSHPLWSVVIGLLSIAVVWSIIRAIVRGIESISVTILQTPLKLIWQGIKLIFQGLGKGVWFGWKKLTTKSSEETETSGDKEVDGTVETAVKVDVVPIQLQTQQRLAEISMRLVQIQKEQTELLKEAAMLMEGNQVEHHLLTPLNGSIQPQDVKN
>NZ_AP018254.1|WP_096620250.1|523102_523855_+|hypothetical-protein
MRANSIDDVLIFLDEIIHTSKAERSRIGFFAALYRQVTLKILAGMNHGFFDDNQRMNHFSAEFANRYFDALIGYREGEFVTKSWEIAFTATNQTDVIILQHLLLGINAHINLDLGIVAAQICPGDKLKDFQHDFQGINTLLIDILEDVQGVVNQFSPLLDILDRVGGRKDEEIIKFSFKKARAQAWKVAEYFAVLSADEQIKRIQELDEKIAFLGQIIISPSRIIDKALDLIKMQEDDDVVKIIDGLNLV
>NZ_AP018254.1|WP_096620251.1|525249_526197_-|NAD-dependent-epimerase/dehydratase-family-protein
MAKKIVTGAGGFIGSHLTDTLLQQGHEVIGIDEFNDYYDTNLKRKNIAHLQDHPQFELIEAEIQTLDWHKLLADVDVVYHQAAQAGVRASWGQGFRMYTERNINATQVILEAAKDAKNLQRFVFASTSSVYGDAETLPTHEGICPAPVSPYGITKLAAERLCMLYHKNFGVPFVSLRYFTVYGPRQRPDMAFHKFFKAVLDNQAIPIYGDGEQTRDFTFVSDAVAANLAAANAPDAVGEIFNIGGGSRVVLSQVLQTMEEIVGQPIQRNHIGKAMGDARHTAADISKAQKLLGWQPQISLRDGLTQEWEWIQRLY
>NZ_AP018254.1|WP_096620252.1|526928_527654_+|G-D-S-L-family-lipolytic-protein
MHLLEASANMEHLLISKQQQPLKIVVLGDSLVYGFGDPEGGGWVERLRREWMCPQRPGHILYNLGVRGDRTSQVAQRLETEFRHRGELRNRVPDLIILSVGVNDSARVGRLDGKPYTELSRFETQIGDLLDHASQLCPVLFVGMVPVNEEKMPFLDCLYYNHADQYIYKEITRQACCDRRIPYLDIFQQWMAHSQDWINARLSNDGLHPNALGYQTLLNAVKNWDAIPTQYSSKTLCQASI
>NZ_AP018254.1|WP_096625823.1|527814_528249_+|hypothetical-protein
MTPTLFGRWQTRLLLLGTVGILISLPFAMGIIGPGANSVYYWILGYVAIFGLAWDILYNQIQKYRWDRDWPAAYQLMAGIWEMVFVFCGVKLFGFLPIPIPKEELDSLAFLSHYSLVWLGVFICSQSVMRIIFPRWRFRGGQWL

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Crispr_ID: NZ_AP018254_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_6

570165-570235

Orphan

Consensus_repeat	Method
GGTTGACGTTGAAGGGTTTGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_6

>merge|NZ_AP018254|6|570165-570235|CRISPRCasFinder
GGTTGACGTTGAAGGGTTTGCACCTGCTCTTCTTTTTTCTCCTCAACTGCTTGACGTTGAAGGGTTTGCAC

>NZ_AP018254|6|6|570165-570235|CRISPRCasFinder
GGTTGACGTTGAAGGGTTTGCAC	CTGCTCTTCTTTTTTCTCCTCAACT
GCTTGACGTTGAAGGGTTTGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620277.1\|566446_567088_+\|restriction-endonuclease-subunit-R	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625829.1\|573675_575433_-\|DUF4157-domain-containing-protein	unknown	unknown	gnl\|CDD\|379338
NZ_AP018254.1\|WP_157780623.1\|560929_561199_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620273.1\|554984_556712_-\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_AP018254.1\|WP_096620286.1\|591214_591703_-\|GPW/gp25-family-protein	unknown	unknown	gnl\|CDD\|377431
NZ_AP018254.1\|WP_096620281.1\|575853_578073_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620282.1\|578126_582818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780622.1\|551097_551382_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620285.1\|587497_591193_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274051
NZ_AP018254.1\|WP_096620272.1\|553602_553977_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892743.1\|562676_565157_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NZ_AP018254.1\|WP_096620287.1\|591812_592106_-\|PAAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|269823
NZ_AP018254.1\|WP_096620274.1\|557651_560234_-\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|223385
NZ_AP018254.1\|WP_096620268.1\|549043_550315_+\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|223834
NZ_AP018254.1\|WP_096620284.1\|586914_587373_-\|carbohydrate-binding-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620270.1\|551804_553025_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|274425
NZ_AP018254.1\|WP_157780624.1\|572490_573555_+\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275380
NZ_AP018254.1\|WP_096620283.1\|582822_586740_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274051
NZ_AP018254.1\|WP_096620279.1\|572092_572338_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368573
NZ_AP018254.1\|WP_096620276.1\|565173_566241_-\|YbjN-domain-containing-protein	unknown	unknown	gnl\|CDD\|341116

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620285.1\|587497_591193_-\|hypothetical-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	0.0050417
NZ_AP018254.1\|WP_096620273.1\|554984_556712_-\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	0
NZ_AP018254.1\|WP_096620286.1\|591214_591703_-\|GPW/gp25-family-protein	gnl\|CDD\|377431	pfam04965, GPW_gp25, Gene 25-like lysozyme. This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.	6.59477e-30
NZ_AP018254.1\|WP_096625829.1\|573675_575433_-\|DUF4157-domain-containing-protein	gnl\|CDD\|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	4.60254e-38
NZ_AP018254.1\|WP_172892743.1\|562676_565157_+\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	8.11078e-121
NZ_AP018254.1\|WP_096620287.1\|591812_592106_-\|PAAR-domain-containing-protein	gnl\|CDD\|269823	cd14738, PAAR_2, proline-alanine-alanine-arginine (PAAR) domain. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family, where it forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). The T6SS is responsible for translocation of a wide variety of toxic effector molecules, allowing predatory cells to kill prokaryotic as well as eukaryotic prey cells. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes. It has been shown that PAAR proteins are essential for T6SS-mediated secretion and target cell killing by Vibrio cholerae (encodes two PAAR proteins) and Acinetobacter baylyi (encodes three PAAR proteins); inactivation of all these PAAR genes results in inactivation of Hcp secretion as well as T6SS-dependent killing of E. coli.	1.00909e-37
NZ_AP018254.1\|WP_096620274.1\|557651_560234_-\|M1-family-metallopeptidase	gnl\|CDD\|223385	COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism].	3.21417e-177
NZ_AP018254.1\|WP_096620268.1\|549043_550315_+\|lipid-A-disaccharide-synthase	gnl\|CDD\|223834	COG0763, LpxB, Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane].	6.8785e-11
NZ_AP018254.1\|WP_096620270.1\|551804_553025_-\|glycosyltransferase	gnl\|CDD\|274425	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.	4.86278e-64
NZ_AP018254.1\|WP_157780624.1\|572490_573555_+\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.97741e-42
NZ_AP018254.1\|WP_096620276.1\|565173_566241_-\|YbjN-domain-containing-protein	gnl\|CDD\|341116	cd17033, DR1245-like, possible type III secretion system (T3SS) chaperone protein DR1245 found in Deinococcus radiodurans. This family includes a possible type III secretion system (T3SS) chaperone protein DR1245 found in Deinococcus radiodurans, a bacterium that is exceptionally resistant to the lethal effects of ionizing radiation (IR), ultraviolet light and other DNA-damaging agents. DR1245, a protein of unknown function conserved only in the Deinococcaceae, and with strong structural homology to YbjN proteins and T3SS chaperones, may display some chaperone activity towards DdrB, a protein found to be highly up-regulated following irradiation; DR1245 may also bind to other substrates.	8.55132e-15
NZ_AP018254.1\|WP_096620279.1\|572092_572338_+\|hypothetical-protein	gnl\|CDD\|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	0.000109798
NZ_AP018254.1\|WP_096620283.1\|582822_586740_-\|hypothetical-protein	gnl\|CDD\|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	0.00208198

>NZ_AP018254.1|WP_096620277.1|566446_567088_+|restriction-endonuclease-subunit-R
MVRTIAARNVKLYDLKVKFGLQRVHDESFFREWLDNLPELTDVEKQALDRLQRNYLYLLEYPVMESIVKLSNKMVVLSPLLDLAGFYEPPFRVDGETNVQVSAEDEGEVIQGSIDVLVIQEQFWVTVIEAKNSEFSLTKAIPQALAYMLASPNPERPLFGAVLNGSEFLFIKLVRGEVPQYGLSDVFSLLNRGNDLYPVLRIFKQFANLIAIA
>NZ_AP018254.1|WP_096620276.1|565173_566241_-|YbjN-domain-containing-protein
MQNSTNPEIENSTAPHIASQIFDRAIATLTHDDNQLIECDLICQIPLDVYQIIEKQGLFNFKPEFCSQSVTFTTDSNITLKVTLHPDRFPDLKEHTTTPETTRQYLQELSHNQPDDPLLNFDNWFILSAQQGNLSYTTLWDTLNPSKLAAGEIPKAELTESLSKFFVNIAETEFNKAFGQLGQDILADLSNLFLLDNQEVSNHPVTNIMVAFFTNDDWTFTKIQGKPILQMGYQGENGQFICYARANENPQQFAFYAIFPMLTPEDRKLAIAEFITRANYGMVIGNFEFNFDSGEILYKTSIDVEGDRLTAALIKRLVYTNIAIADRYLPSIQAVIDGTSPTEAIQTIEQQNLTS
>NZ_AP018254.1|WP_172892743.1|562676_565157_+|CHAT-domain-containing-protein
MNADEIQFRADNYTYIQQIKKGQYLYEVGRFSEAVQIWLQVKPNLDQSYQALVYSYLALAEQNLGQTKLAETYIQRGLSLIKTAHNQFIYAQILNHYGEVLYRQGKLEMAVEIWQQAQNIYERLGDKSGELGTQINQARALQGLGMYRRARNLLESLSISWQKQPVSSLQIDGLISLGNILRLTGSFKTAQINLEQALVLAQKSHDIQRQLLALFNLGNLAADQQEFARAIDYYQQILDSPEQNANPELKLSTQVKLLGLLIKTQAYNQVKEIIPPLQTQLQQQPLTQTIVYIQIELGRYLARLKQLIPAVETLTQAAKNARIIGNPRAESYALGELGKIYEQNRQWSEAKKLTQQALNLVSATTAPEIAYEWEWQMGRLSNYTGAKAEAIIHYRQALTILRSLRQDLAVISSDIQFSFRDRVEPVYRQFVDLLLTPSIPTSQANLLEARQTIEDLQIAELTNFFRQACVDDQPRNINQIDTNAAVIYPIILSDRLEVILSLPGKPLSHYATFIPQPQIEQDIQTMRQSLRRTSFLQERQAIAEKIYTWLIQPIIPQIKQSQIKTLVFVLDGSLRNIPVSALFDGKQYLIENYQIALALATPKGKIAPSGQRFNSPPLSQYQSKVLLAGLSQSNRGFTSLPGVKTEIEKIYNLFRNTQPRRTIQTLLDQEFTTQALTQKISNQSYNIIHLATHGQFSSQAENNFILTNDGKLDISTLDQIISQRQLSDPSSLQLLVLSACQTAQGDNRATLGLAGVTVRSGADSTLASLWTINDESTPLFMVQFYEQLLTPGVSKAEALRQAQLYLLQHTQYNHPYFWASFILIGS
>NZ_AP018254.1|WP_157780623.1|560929_561199_-|hypothetical-protein
MLQQISTSSGQPCINLLNAALLSPQYIFTAFDKNCDGETATPRSPSSGLTVASKFIIDTTYAIISVKQDFEIATPASRSAARLPSVAMM
>NZ_AP018254.1|WP_096620274.1|557651_560234_-|M1-family-metallopeptidase
MLHSYFDTEKPHHKSFELPGARPHYNPDRPGQVKHIFLDLDLDIPHSRYSGTCTITLVPIRDGVKSVTLDAVDLTIGSIQVNQVPQRYDYDGEKLTIYLETATEINVPLEIAIAYSNQNPQRGIYFIHPDPYYPHKPVQVWTQGEDEDSRFWFPCFDYPGQLSTSEIRVCVPQDFMAVSNGELIKTEELAEKKIYHWLQKEVHPTYLMTLTVGRFSEIRDAWHDKPVTYYVEKGREADAKRSMGKTPRMMEFLSEKYGYPYPYAKYAQVCVDDFIFGGMENTSTTVLTDRCLLDERAAIDNRNSESLVVHELAHQWFGDLLVIKHWSHAWVKEGMATYSETMWTEYEYGREEAAYYRLQDMRSYLAEDADRYRRPMVTHVYREAIELYDRHIYEKGACVYHMIRSELGEELFWPAIQQFVRDNAHKTVETVDLLRAIETATGRNLLFLFDQYVYRGGHPDYEVSYSWDGESHLAKLTVKQTQPGKHNLFDLRIPIGFGYQDGEGLVALQQFTVRIHEAEQSFYFPLTEKPLFISFDIGNNYLKTVTLKYPVVELKAQLELDPDPLSRIFAAQALAKKGGLEALTALTKALHQDKFWGVRVEVAKQIAKIKLDQSLDALLSALGDTNPYVRKAVVEALSQIKTHQSYQALKNLLKNGDRSYYVEAAAAKGLGAVTTGFDSDKSQPDKVIKHLTKVLAEKAGWNEVVRSGAIAGLAELKTSSAALDIILEYTKLGVPQPLRLAAIRALGQISTGQASPDVERVLNRLSELAQESFFLTQVAVCTSLGKMETPKAITILRSLSHQTPDGRVRRLADEEINRIQEKIGKDTALRQLRTEIDQLKQQNQELRSRLEELEAKSKSC
>NZ_AP018254.1|WP_096620273.1|554984_556712_-|AarF/ABC1/UbiB-kinase-family-protein
MGQYQPAQLNRYSPDAIARYYRYRPWRAWGRALKIIWYFAGFILALLMDRWFNREEANKYKRAARLREILTDLGPTFIKVGQALSTRPDLVRKDFLEELIKLQDQLPAFDNAIAYHIIETQLERSIDEVFRELSPTPVAAASLGQVYRGRLVTGEEVAVKVQRPHLRSVLTLDLYLLRWAAQTFGWLLPLNLGHDLTLIIDEFGSKLFEEIDYLNEARNAEKFASNFRDDPHVKVPMIYWQYTTNRVLTLEWINGFKLNDTEQIRAAGVDPEAVIEIGVTSGLKQLLEHGFFHADPHPGNLFAMPDGRMAYIDFGMMDQLDEMTKETLVDSIVHLVNKDYAELAEDYVRLGFLTPDTDIRPIIPALEAVWSDAIGKNVGEFNFKTITDKYSEIMFDYPFRVPAKFALIIRSLITQEGIALSLNENFRIVEVAYPYVAQRLLTGESPELRRRLINILFKDNKFQWERLENLINIARTDGDFDVLPTAKLGLQYLFSDEGKYLRRQLIFALTEDDRLHTEEVERLWNLVKNDLKPDRIFGAAVNFLAEVSRESVAAIIPKTKLLAIFGIPTATNSKQ
>NZ_AP018254.1|WP_096620272.1|553602_553977_-|hypothetical-protein
MYYFPSQPPYLLLAFGLFTAVTSGAALSGTLQSLVGAWQNAGAENSEIQLTKKPLIFPFLGITLGVGVFLVSGLEIFGFPPLLAYGVGLPMGILTCLLIWLQLGSMMTFMQSRGMSSLDLDSMS
>NZ_AP018254.1|WP_096620270.1|551804_553025_-|glycosyltransferase
MRILMLSSTFPYPPSRGGTEIRTFNLIKYLHFKHDITLVTQRHEGVSDTEVEELRQWVRELIVEPLINDSNSSRNWLGKVNRFATSLITATPANVLHRYSPRIQAIVDKYVLEQKCDVITCEHSVNEIYIRPEFRHRLKTVVDIHSSVYGWTRDHLSAGASANVLRDRLYLNLILNRYERRYSRKFSHLVVTTQDDKSEFLKLRPDLDIQVIPNGVDLDLFPERGYDQGGHRLIFVGAMDASHNIDAAKFFALEVFPHIRDRYPDASFSIVGARPVSEIQELGNRPGVIVTGKVASMVDYLHQSTVCVVPLRTGFGIKNKTLEAMSAGVPVVGSDRGLEGLVVDDGKVPLRALRANQPQEYVQAICQLFENSALRQELAQNARQMVEMEFTWESAGKRYEQVLIGN
>NZ_AP018254.1|WP_157780622.1|551097_551382_+|hypothetical-protein
MNSNLCKLLTLLCSIAVFAIASPCCAQTNPTNGETDTTPTADISATASTRNPDTPLTAQSTENPDTPAPVAAAPANPRIPIPSKLFPFVPSMQQ
>NZ_AP018254.1|WP_096620268.1|549043_550315_+|lipid-A-disaccharide-synthase
MTSVDILILSNGPGEITTWVRPVVKALRQTLGHDRNTLRISVILSPCPNASGKEAQIALSYPEVDRAQGAEGFFRFLISGETQEKWDWRKQGIIIFLGGDQFFPVIIGKRMGYKTIVYAEWEARWHRFIDRFAVMKADVAAKVKPQYTHKFTVIGDLMAETDFQRPSNDNYNQSIATTHLIGILPGSKAAKLAQGVPLTLAIAEHIYAKKPETKFIIPVAPTLDLEKLASFANLDTNPVGKYFNFQGASLITDNLQQPILQTSQGLSVELHTHHPAYDRLARCSICLTTVGANTAELGSLAVPMIVLLPTQQLDAMRSWDGLPGILANLPGVGSSFAKLINWWFLRRKGLLAWPNIWAQKEIVPELVGKLQPQIVAEMVIDYLDHPQRLEAMRDQLRQSRGEPGAATKLVAIVQEEMERMGSI
>NZ_AP018254.1|WP_096620279.1|572092_572338_+|hypothetical-protein
MQLLSRPVSSFSTYENCRDRIQNGDIIAFSGNDIFSDLIRRVTNSCYSHVGIVLDVNMNGAFGQSILIVESTTEVSQRRDA
>NZ_AP018254.1|WP_157780624.1|572490_573555_+|leucine-rich-repeat-domain-containing-protein
MEMEKRELLEMIARADKEEWEELDLSDKGITELPKEIGTLTHLTQLYISENELTYLPPEIGNLINLTKLELQNNQLSELPVEIGQLINLSHLYLWNNQLSQLPSCLDLLVNLTAVDVSENQISQLPLELFHLPILQRLNLGSNPSLIIPEDVVNLANLTHLELGSNNLQQLPPVIGKLTSLQQLNLSYNQFTHLPAEILQLTNLTQLDLSHNSLEQLDPEIGKLVKIQRLNLGSNRLTQLPPELGNLTNLWELDLGLNQLSQLPPEIGHLTNLTVFNLSFNQLTQLPPDFTKLTNLRELGLISNQLTELPPDMENLTNLTRLLLEKNNFPFDIPPEVHQLSPAEKIKYILQKQK
>NZ_AP018254.1|WP_096625829.1|573675_575433_-|DUF4157-domain-containing-protein
MPAFDSEVTTNGEVQRKLINSPQHSPVLPIQAKLTIGEPGDKYEQEADRVASQVVEQINTPAPAQSTQGQMVQRQGGEEEESQAKPEITALQPQGENKQELQAKSNLQHGEASTDLTSAINTVRGGGQPLDAGLQRSMGQVMGADFSRVRVHTDTQADQLNRSIQAKAFTTGQDVFFRQGAYEPGSRGGQELIAHELTHVVQQNGGVVMRSPQMQEQLQPHPDKKTPARIVQTQNTQVIQLATDPVGNFASYDAANLQIVSNNTTANPTEAKVLNSGIQGPVSAPQDPGGFATLTHDDYEQMTGTSHPPKRTMYNLDLNWDRDYGNTKRQYTRMHAVNSFLAQNSNVSGNIFSGRQSYNKKHEQRAEGFAKGFVDEQSWQVVAGDTLVNTLNSTDKIGKNAAGKLYYKPGINNNFPVAFVDNSTPIVGNDGAKYSGVNVDKLSSVCVIEYIVKPTYGLNLATVKTSITNSLNPLYQNLNIAPNEDGTPGKTETIDSNGILNTAANALVNTYATSMTIDIINWVFNPNGITANTDVATNAVPWKDNPVRPLINISPDPPQPGAKVEFRFWDSSNRKLTSRPAAFDI
>NZ_AP018254.1|WP_096620281.1|575853_578073_-|hypothetical-protein
MSKQRHIIARTVIELDTQQLADVWSLQSDVSHLFQQQGVEAIAELFDQLVEEGEVVRLERVEVDIGDLDSRLLADEFIHKLQTALRETLGDHLTDLSLGILTAKSIHNSENSDWEVFIYFLQYGRFPWWCPVRDWQEWLSSWLDAMQIDTNQQEKLRQLLRHHPPTQQRLIEQFPESFRHQLVLKLQPTWINWHHLLTQAKQIIQSWVWVMRLDNSVRLHQEKQAWLLLLREIDADTTLTRAFPTTWTHNWLTQLMQFWHLNQAKHQTPTFPSVTPQPITQRLRTILTAVPQSEQSLWLTALEQVLNLTSHLSNSDTTYPLPGESQEQTEPWRPNLQSGDNRDNHTPNLPRDGEVLLHFLQYGRLPWGEISADWHIKWENTIQTEKSWHLPLRKLLRNNPTAQQRLVTQLPEKLRYQLVQQLQPNWTNWYKLLTQAREIIQSCNLSNYTSQQLIDQAWRLLLAEMTSENPPPTFPAATWTRNWLTQLLQTPELNRLIPTSDPEEQASVNQTPYQHLHTIITTLPIAEHLPWLTALEQVLSNISKNTPTVPTNWQENPSQTDKTSILSTAEATAGLYITQAGLVLLHPFIPFYFKAIGLLNNELFPDESAQQTAIYLLYYLATKQTDTPESELVLPKLLCGWPLNQPVARGLDLPDAALEEGERLLQTVINYWQVLKSTSPDGLREGFLQRQGKLTPTGDGNWKLQVEQQAIDILLGSLPWGVSMVTLPWMEGILIVEWT
>NZ_AP018254.1|WP_096620282.1|578126_582818_-|hypothetical-protein
MNTTINQTGYPIFTPNQVLKNNDLNQVVEYLDSQNYLTRTHLIGMGIIAGMEVSSSYTQEVTKVKAKISVSPGCGITSEGYVISFDSKIQLTHYQDVKVSSSLFTRENLIAAIQPLTSEVIELFPEAGNQRIILHKNPDGTQRDVQKFQEFISDRVLVVLCEIEDLHNEFCFFEYDESSRYRNFRWRFFLLPRTQNPDSSQAQQLSADTLLKTAYQIPEQPWQGLTVENIFNARNHFLQEFDRTTKKFQNFAPQVERFGYVKAKKSVDLSAINHYQAFWDNYYQICTHAIAAIDRSFPKLFWLFSPFFHAFQPNSGRDFNQLQQRLQTRLEAFRRQETTSTSEQIKPPEPPYGIQYFYDYLSQLVAAFYELAETVFDLMDDYPPETRRFPKYLMLGLVPPPSPVTTEPNQGLILTSPYRSYFTQPPIYNSNQVRLQRVRHLYERLLKLSAKDSFDLLPFYITPLKITPSLDRSAPLSKQAIPYYLNYPNLYKYWNYDAYRKGISDRHPAYFYPKRNPEENFHEFQDLNYRLDNYNFYRIEGHIGKGNDQVFKNLRDYQQRYNLAFDVITLKLGNRASLEDLNISGQFADLEADFRRIKGAFQKLWTQHEHEWSRNVFLQTLKQSFFDKSDLKDMDSGQLSNFILERAGKPEAYEFVKVENTEQQFQIYIRDENNIRIARYVTQIADTRGNSLSDFRNLIIDFAEISLDEIDQEKQRIIKEIAFSISSPEVTYDLVIDPASNPEKYHLKFSTDDTIVLPSVNLSYSPILVSLSHFAVGQQNNQPIIPQKEFQDFETLYSLLRDSSLVYGPTTLAQNNPQSYLMGDKQVAEELNDLNLTELIKTYQLRLEQLKKLHLFPNFAQQHPGMEHLGGVTKGGTFVLVYVDGKEVDELLVGDRDPAIHQLRSVHTEAIRKFVALPEDLYTENIGNWKRLFEELEKRKDIVIADFCLPYRCSSDAPAVSYVLARSRPIILLEKTNLVFCEGDQRRYEFILEPEGGTVRGEGIVFAGSKQFFQPSSIDPGSREDLARGLEVAITFTYAVDDTYDTLTVTIYPLPRPNLSVSDGQSFCHNAAPVEIKLANGTPDNLQLIQVKINDVETNILNPRGYATEGETETVIITALIRNQTTECENTLTHTITIYPLPQADLSVRDGQTFCNNADSLNITLADDTPENIELIQVKINDVETNLLNPREYATKGETETVTITALIRNQTTECENTLTRIITIYPLPQADFQLEIDNINSNGFSIRVYDIQPTGENSFTFHWEHDGISNPINPGNNNFIISYASDSHHWVADAVVSITLRVQAPPELGNCISEPVTKTIPIPIGGVQGLQLLTISNNQIINTLTLESDSNFNISDFHPNNEYAIAALTIPPLVGSVVFEYTPPNANSEVIPAINPPYILPNWQPTVGMHRITAQTTREINSDRIEGNTTTVTIHIHDDSNSEPELTPNQPTPRSLKLPNQLRFFLPPSDEEIAQFKPIIQQEKIQSSQILTLYQPHIDRWRQTNTTKEKNLMFSLLTRQNYRNQILALGAATLLLIMGWTYTLSRQTQTPQNPEPQSNLRF
>NZ_AP018254.1|WP_096620283.1|582822_586740_-|hypothetical-protein
MLPYPTISKLKPKFPDYLDFQILRDIGIKHLQTLSGKIWTDYNLHDPGVTILEVLCYAVTDLGYRNNLDIQDLLALDSQQRENNFFTPDQILTCNPVTDLDLRKRLIDIPGVRNAWIEIFTEVKSKEKTEEITKEEAKKISTYHPPIYINYANNQLQYNPPKGYTEKNAPRLHPRGLYTVYVDLDREYGKNACGQIYNSWSHTLDSVKAVLCSHRNLCEDTYDIVVLGAEEIGLCSDIELDANAEAEDVLVEIYVKIQEFLSPRLKFYTLQELLDKGKGIEEIFAGRPSVIDNYESHGFIDTTELEALTPPEVIYTSDLYQEILKIPGVVAVKRLSIINFINGLAQSQSPWHLKLTKGYSPVLGIEQSKVTLFKGVLPISPDGNEVKRRYYEQQTAHIKVLRHGNDLDLTVPQGSYYNLADHYSIQHDFPLTYGIGEEGLPEGASVLRKAQARQLKGYLVCFDQLLANYLVQLAHVRDLFSWEVDETQGRNNDHMNRPPDKSHTYFIQELDFPEQNAILGEGGGYLQAIQEEPETYRDRRNRFLDHLLGRFAESFADYVLINYRIIQERGDQFQDEVEVIQDKAQFLQDYPALSRDRFRAFNYCNYQQVWDTENVSGFQKRVSRLLGFEDVHRRNLCHYEVDEVSGGFVSFVVTCGDEEQSLISLQTYVNQKAAQASIEKFLLFALHETFYQRLSYSYFYHYGLEVEVKPDNKDEESITARYESAFFSQAERLAGLNFLMESLPSLLNWREQENDVISTISQESVIKTEKIKEENLYYFQLNIPVSSSATSTPIRFVGNQRYFSEPLAHQAAIAILKQIATRQNYYPILFRQDKSSERETLNPSDETRFIHYGYALVDQEGKVLGESGKRFPTKQERETALQNWLSCLQFNPNQFQESDERFLQIEEVTGETSGYRFRLIDREGVTILRGLQLFADENTVRDRFYENVLSVLFEPGAIEATVSDEGFGFRVLSRPRVPRSAVATSPQLYPSESERDAAIEHLFLLVRTAHLNITWTGLENSSNPSYIGRVYDQNRNIFLEASQRHPTPETAWEQGNVLMKLAGEQAEFSENGKSDAKNFRLIDGEPADSGNNSDPNQSVPETHGWELTNRGKDNILATHYYTSKEERNQSIQELQKLVNDEGFHVLEHILLRPRTTSDNFLPICVNTDDATRGEPNQLTYQDPYSFWITIILPYWSERFRNIDFRRFVERTLRLEAPAHVALKIAWVNVQQMRDFEVAYRNWLEQLAWETGNGSTCNLSGTLNDLIQIISQLRNIYPQGILYDPQFVSQNQPIILNQTALGTASE
>NZ_AP018254.1|WP_096620284.1|586914_587373_-|carbohydrate-binding-protein
MTLKNRNELKSLFKNNTHLSVTHFHELITSLLNKKEDKFHGVWKAGQTYQTGDVVYYERTLWEMVEPKEICAKGGEEPDKSEKWKSRLRELEQKVETIQQDLQALCKEFTEYKQQMDLRWEQLLKYLTLLTLGIAIALVWLFGGAIYHFWQS
>NZ_AP018254.1|WP_096620285.1|587497_591193_-|hypothetical-protein
MNIRREPPKNPLIRDGVSQGQRQLPALSPDFVKIDEGDLADFLVFAYKLSQQVSYYKDDNTADGNWQEFFTHSTPVQIALISKNRPERVKDEYRQHLEKFLENPSREALKPILAGWRGILLRIQDWYENLEDYTPLKSAIAGLVQTNLREPLKRMYSFDRVTLETPDFYQKFVEVFFPESISWEIEPTEILVTGTVLEARAELDFVFQALFQNYRQVILIAPKYLRDSLEKRQDHPPHLSLYFAFWEVMRPVRDDLNRMTQRHLDFFYRQVLRLRDRPGEPDSAHLIFELAQFPTEYKLDAKTRFLAGKDASGADLFYQLDEETVIHKAQIASLKGLFLNSQEIATGNQPENLLGLHTSSQANSFDGEGGDFPKEQVVKAWLPFGDNTRKHGQIGLAIASNIFYLREGNRTLVFTLTFEQKVVAVKASDLPQIFTIEFSGKKDWIAGEIIIPQISETSLENNTLKLEVKLTSEQEAIGIYNPELPGAKLSLDKPVARLLLKDDVLVNGLSAYSYFRQLKLTKLNIQAKDIEVRNLVLQNDFAILDPTKPFQPFGIRPKTKANFYIGSQEVFQKHLTALTIYLELEKEKPKNWLDIYAAYDGASDVNNPDQVTLNSNFQPGKLAISSLGNKIWNTATTQPNLFDSGEISLTGELANLKLDSVANAEIVEAFTPDSQNGFIRLQLTGSDFLHDEYPAVLARQVLAAATNNKINVPNVGLKRQAVIGAYYRNNNGIFKATSSRYYVDFSDEAIIPQEPLTPVIQEISLKYTAVAEKKDCKLFHLHPFDGFASWDEQKPYFLPQFLNEGELLIGLENLEPPTALPLLFQLVEESANGELEKAEVEWYYLQDNNWISLQKSIIIDNTNGLIASGIINVPIPQEINKHNTILDSNLHWIKASVKSRIRAICKIIGIHTQAARVTFIDAGNDGQHLANPLEPGTITKLAVPTAAIKKIDQPYNSFGGKIKEQPSYFYTRISEHLRHKGRAVTIFDYERLVLEKFPQIHQVRCINHGKIEGQQLNELAPGTVTLVVIPKLSPESILQQLEPKVNLNLREKIKKYLLTVCSPWVDIQVVNPIYEGIQVEFSVRFKSPYDNNFGYYSRELDRGIIRFLTPWTVDPGTEMHFGGVIYRSAILNFVEQQYYVDYVVDFQMHHQNQRENQRNVREAIASTSRSLLTSIPVVSNGQTHIINEINATSEVVPNEKLISGTLGYEALEKMILLPLKEEGGEGGNGNE
>NZ_AP018254.1|WP_096620286.1|591214_591703_-|GPW/gp25-family-protein
MENNDKAFLGTGWGFPPTFDRGSRNVRLVSGEEDICESLQILLSTSLGERVMQPTYGCNLQDFVFEPLSPTITSSIKEQLRTSILYHEPRILLNSLDLSLDEQLEGRVKLTIDYTIINTNSRFNLVYPFYLEESTGSLLPAVNTGEIPVNLRLGGVTNVTDI
>NZ_AP018254.1|WP_096620287.1|591812_592106_-|PAAR-domain-containing-protein
MGKPAARLTDMHICPMVTGVVPHVGGPIIAPGVPTVLIGGLPAAVVGDTCTCTGPTDTIILGSTTVMIGGKPAVRIGDTTAHGGSIVLGAFNVLIGG

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Crispr_ID: NZ_AP018254_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_7

767781-767887

TypeV

Consensus_repeat	Method
ATTATTACCCATTCCCGACTCCCGACTCCC	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_AP018254_7

>merge|NZ_AP018254|7|767781-767887|CRISPRCasFinder
ATTATTACCCATTCCCGACTCCCGACTCCCAATTTTCAACTCCCAACACTGCTGGAGTAAACAAACAATTTCCCAACATTATTACCCATTCCCGACTCCCGACTCCC

>NZ_AP018254|7|7|767781-767887|CRISPRCasFinder
ATTATTACCCATTCCCGACTCCCGACTCCC	AATTTTCAACTCCCAACACTGCTGGAGTAAACAAACAATTTCCCAAC
ATTATTACCCATTCCCGACTCCCGACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620404.1\|761006_763292_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|365939
NZ_AP018254.1\|WP_096620406.1\|764928_765402_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620402.1\|757094_757358_+\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|373040
NZ_AP018254.1\|WP_096620413.1\|772195_772522_+\|50S-ribosomal-protein-L23	unknown	unknown	gnl\|CDD\|376308
NZ_AP018254.1\|WP_096620417.1\|774468_775224_+\|30S-ribosomal-protein-S3	unknown	unknown	gnl\|CDD\|234722
NZ_AP018254.1\|WP_096620407.1\|765843_766458_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620418.1\|775340_775772_+\|50S-ribosomal-protein-L16	unknown	unknown	gnl\|CDD\|236411
NZ_AP018254.1\|WP_096620419.1\|775776_776010_+\|50S-ribosomal-protein-L29	unknown	unknown	gnl\|CDD\|177071
NZ_AP018254.1\|WP_096620405.1\|764462_764825_+\|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl\|CDD\|143581
NZ_AP018254.1\|WP_096620412.1\|771570_772203_+\|50S-ribosomal-protein-L4	unknown	unknown	gnl\|CDD\|235404
NZ_AP018254.1\|WP_096620415.1\|773752_774031_+\|30S-ribosomal-protein-S19	unknown	unknown	gnl\|CDD\|178985
NZ_AP018254.1\|WP_096620401.1\|755758_756883_-\|transposase	cas14j	-	gnl\|CDD\|223747
NZ_AP018254.1\|WP_096620414.1\|772782_773646_+\|50S-ribosomal-protein-L2	unknown	unknown	gnl\|CDD\|236488
NZ_AP018254.1\|WP_096620410.1\|768757_770008_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224732
NZ_AP018254.1\|WP_096620403.1\|757369_758587_-\|PilT/PilU-family-type-4a-pilus-ATPase	unknown	unknown	gnl\|CDD\|225364
NZ_AP018254.1\|WP_096620408.1\|766631_767576_+\|PDGLE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376649
NZ_AP018254.1\|WP_096620416.1\|774033_774393_+\|50S-ribosomal-protein-L22	unknown	unknown	gnl\|CDD\|214342
NZ_AP018254.1\|WP_096620411.1\|770851_771496_+\|50S-ribosomal-protein-L3	unknown	unknown	gnl\|CDD\|234564
NZ_AP018254.1\|WP_096625860.1\|759622_760783_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_AP018254.1\|WP_096620400.1\|754623_755121_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620404.1\|761006_763292_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|365939	pfam00196, GerE, Bacterial regulatory proteins, luxR family.	5.91468e-08
NZ_AP018254.1\|WP_096620415.1\|773752_774031_+\|30S-ribosomal-protein-S19	gnl\|CDD\|178985	PRK00357, rpsS, 30S ribosomal protein S19; Reviewed.	3.64363e-61
NZ_AP018254.1\|WP_096620402.1\|757094_757358_+\|BrnA-antitoxin-family-protein	gnl\|CDD\|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	1.15578e-11
NZ_AP018254.1\|WP_096620413.1\|772195_772522_+\|50S-ribosomal-protein-L23	gnl\|CDD\|376308	pfam00276, Ribosomal_L23, Ribosomal protein L23.	3.34102e-41
NZ_AP018254.1\|WP_096620417.1\|774468_775224_+\|30S-ribosomal-protein-S3	gnl\|CDD\|234722	PRK00310, rpsC, 30S ribosomal protein S3; Reviewed.	7.3195e-131
NZ_AP018254.1\|WP_096620418.1\|775340_775772_+\|50S-ribosomal-protein-L16	gnl\|CDD\|236411	PRK09203, rplP, 50S ribosomal protein L16; Reviewed.	3.64412e-98
NZ_AP018254.1\|WP_096620405.1\|764462_764825_+\|TerB-family-tellurite-resistance-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	8.06061e-05
NZ_AP018254.1\|WP_096625860.1\|759622_760783_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	2.57296e-43
NZ_AP018254.1\|WP_096620419.1\|775776_776010_+\|50S-ribosomal-protein-L29	gnl\|CDD\|177071	CHL00154, rpl29, ribosomal protein L29; Validated.	6.98667e-18
NZ_AP018254.1\|WP_096620401.1\|755758_756883_-\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.96014e-45
NZ_AP018254.1\|WP_096620414.1\|772782_773646_+\|50S-ribosomal-protein-L2	gnl\|CDD\|236488	PRK09374, rplB, 50S ribosomal protein L2; Validated.	0
NZ_AP018254.1\|WP_096620410.1\|768757_770008_-\|glycosyltransferase	gnl\|CDD\|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	6.24943e-67
NZ_AP018254.1\|WP_096620403.1\|757369_758587_-\|PilT/PilU-family-type-4a-pilus-ATPase	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	1.60896e-139
NZ_AP018254.1\|WP_096620408.1\|766631_767576_+\|PDGLE-domain-containing-protein	gnl\|CDD\|376649	pfam01891, CbiM, Cobalt uptake substrate-specific transmembrane region. This family of proteins forms part of the cobalt-transport complex in prokaryotes, CbiMNQO. CbiMNQO and NikMNQO are the most widespread groups of microbial transporters for cobalt and nickel ions and are unusual uptake systems as they consist of eg two transmembrane components (CbiM and CbiQ), a small membrane-bound component (CbiN) and an ATP-binding protein (CbiO) but no extracytoplasmic solute-binding protein. Similar components constitute the nickel transporters with some variability in the small membrane-bound component, either NikN or NikL, which are not similar to CbiN at the sequence level. CbiM is the substrate-specific component of the complex and is a seven-transmembrane protein. The CbiMNQO and NikMNQO systems form part of the coenzyme B12 biosynthesis pathway. The NikM protein is pfam10670.	9.73841e-48
NZ_AP018254.1\|WP_096620416.1\|774033_774393_+\|50S-ribosomal-protein-L22	gnl\|CDD\|214342	CHL00034, rpl22, ribosomal protein L22.	9.96071e-65
NZ_AP018254.1\|WP_096620412.1\|771570_772203_+\|50S-ribosomal-protein-L4	gnl\|CDD\|235404	PRK05319, rplD, 50S ribosomal protein L4; Provisional.	5.44847e-109
NZ_AP018254.1\|WP_096620411.1\|770851_771496_+\|50S-ribosomal-protein-L3	gnl\|CDD\|234564	PRK00001, rplC, 50S ribosomal protein L3; Validated.	1.83671e-119

>NZ_AP018254.1|WP_096620408.1|766631_767576_+|PDGLE-domain-containing-protein
MHVPDGFISFPVALGTGLVSTGAIAFSLKKSQVSFSQKTAPIFGLTTAFIFAAQMVNFPVTGGTSGHLLGGVLAAIILGSPWLATLSTALVLIIQAVFFADGGITALGVNILNISVIGVWVGWGLTQILRTQFGNSWNRLPLFAGIGAGISVVMAAIACSIELALSHTVPLGVVLPAMAGIHVLIGIGEGIITAVVVAGLVKFRPDLFVAIEQPLKGWLIPVIGIFVVAAILSLFASSWPDGLEAVAEEIGFAKLAENIPIAVPTPFADYSISGLNTLGTSISGIVGAIICFVTAFVVVKFTQSANSDRNIVNP
>NZ_AP018254.1|WP_096620407.1|765843_766458_+|hypothetical-protein
MKEKRNEFLSDNSDYLDIIQQAVAARNPKVLVRPSASNVVSALLNAEIAAKKQRLNYKFGNLSGQWRLYFATGTKKAQQRAGIVLGKGFYLPKFVFADINFEPNHQTENIGVITNQIEIAGFRLKLTGLCKYLEKKNLLAFDFEQVEISCLNRIIYKGKIRKKGNSPNFAQQPIAKLPFFAFFLVAEDFIAARGRGGGLAIWVK
>NZ_AP018254.1|WP_096620406.1|764928_765402_+|hypothetical-protein
MKKVQILTTAVFGIVSIVTSLPVFANPALNSALANCARITDPIRRGNCQSAAISTQGSWNLWNSWTPRQQSLATQISQIHYAYHQRTGQPLPVTNGTVAQMMQIIRARANERNFVIERMIANYNAGVALNQADRTIDGANRFIDCLQRQGTGCIPNF
>NZ_AP018254.1|WP_096620405.1|764462_764825_+|TerB-family-tellurite-resistance-protein
MDKFQAAFEILYILSIAEGVVDDRKIQVISNFLMSNLNSINFDVESTIKAISYLSGAGILEEFANAAEIFRNSSYGQERIHLLQFAIEVIAADGNISEGEAYLITYLGDIWNIDLRKLLG
>NZ_AP018254.1|WP_096620404.1|761006_763292_-|tetratricopeptide-repeat-protein
MNQDEFQKIYYQLGDKCRQVLQLKLAGKSNKEIADKLEIKSEATVRKHLEIAYKKFAIASEDKRGSWADLQRLFTQFIPELIPPIPSYSQPKWVGRSWEINTLQRWKNESYQIIMLVGEGGVGKTTLAERFISVCDFHQRLDIKIALEIANLERAEKVVQTWLQRDFHEDVPRDFYLSLKLLSEKLIQSKILIFIDNLETLLVNGVFLPDYRDYLELFRVLSDPRNRGLTLITSREYLKEAQIKDIQTLGLSGLSLGNWQEYFGQNLSSEDIIYLEKFHKTYNGNAYAMKLLYSEIHHQYNGEINTFYQQNRYDIQNLEPFSSLIDNQLDRLNQHSPAAYRLICRLAACRYQQIEWLPDSCVKSLLWDIEHEQRGKIARRLFDCSLVQFHRGEYRMHPGICAAGLTRLQQSDDWEQTHRTIGEFWYQSHPQIQSSRQGLEVLEAYHHYVKIQDYDAAWDVLRRPAISDLPEELFLYFLSWGFIREVKQLAEELIGKISPIKEASLLRCLGDCHAYLLENGIDTALEYHRQAQISAQKSGDIWTEFNSYSDMGLCYYIAGEYEQGLNTYKSKLKIAQSPVSGIIQARENSCWCEIALLNSCLGNIFATKHAITSLGDYTDHPLDFVPPWQVCWDLNMLALAQRNTGNYTDALANLEQVMVLAEQFNFNCDRARCWSTKGDVYRLMQDFPQSLKYQQLAIAFFGKIGNSYELGESQYYLGQLYLAMGNLEQARECWQKSLQLFQKMQLSRQVAKVLTTLDGIS
>NZ_AP018254.1|WP_096625860.1|759622_760783_+|DUF58-domain-containing-protein
MVRRLTNWLERRFCTPAYSGWVLGGICICFFGAAINTMAGWLYVISGISCALLFVAAILPARSLASLSVVRQPITPVTVGDDLSVTLEIHNHGKKTVNLLRIEDKIPIVLGQPISKPIDGIFPETTYTWEYTYPTSRRGVYRWQTVDLISGAPLGLFWCRRSQACAAIAYVYPQILPLTSCPIIDELGRDDSRREDWFGNPYQAAMEGLVRAVRPYHIGDPIRLVHWRSSARYGELRVRELETITEGKEVIIALDTVTSWDDNNFEAAVTTAASLYFYAQRQGLKVQLWTAATGTIRGNRQVLMTLAATHPQEDVNSDLSRETAFTSPIIWLTQTQQTTINLPPGSRRILWTNDDLSNPQQILKRDIPGMIMEPHTDLVMQLQKRV
>NZ_AP018254.1|WP_096620403.1|757369_758587_-|PilT/PilU-family-type-4a-pilus-ATPase
MEEPLASPLSNPNLPHLPSSSSHSFGNGRLEMVTNNTMTIQQMVRDAHTQQASDIHIRVGEVPRFRVRGQILVYQKGEIVTPQDFEAYLMELLTPSQRSRFLETKELDTGIFYPGFVRCRVNCFETLTGGAMVLRLINLEVPSIESLRLPAVLKDIVSQKQGLVLVTGATNSGKTTTIAAMIRFLNENFQKHIVTIEDPIEYVHTSRKSLVTQREVGLHTQAYHDALRSVLREDPDVIIIGEIRDRLTIDTAIKAAQTGHLVIGTLHTKNSLVAIDRLLSQYHPEEQAMMRVQIVDTLVAVITQQLVPSTDGRRVAALEILLNNPTMQDYLLKGEDKAIWQLMESSTHEGMQLMNYALCALMRSGKISIEEAINASPDVADLRRRTRNDAINPLPITQRAICREV
>NZ_AP018254.1|WP_096620402.1|757094_757358_+|BrnA-antitoxin-family-protein
MEAEYDFSQGKRGAIDPTPRGKTRITIRLDDEVLAWFREQVNVAGGGNYQTLINEALRQYIQQSREPLEDVLRSVIREELERMQDCA
>NZ_AP018254.1|WP_096620401.1|755758_756883_-|transposase
MRTLRFKLYEHKRNKHLKRMINASGVIYNHCIALHRRYYRMWGKHLSCAKLQSHIAKLRKRNLFWQSVGSQAVQDICQRIEKAYQLFFKHNKKGVRPPGFKKVKKYKSFTLKQAGYKFLSGNKVKIGNRIYQFWKSREIEGTVKTLTRKRTSLGELFMVIVVDDASNPDVEIKTGKIAGFDLGLKTFLACSDGTKMESPQFFKQSLNAIKKASRQHSKKLKGSANRERARKNLVRKYEDISNARRDWFWKLAHDLTNRFDVLCFETLNLKGMQRLWGRKISDLAFGEFLQILEWIAKKKGKQIVFIDQWYPSSKTCSNCGHVLEKLDLSVRKWRCPSCQSVNGRDENAAKNICAVGTSTAGLDDLRRTLSAIVV
>NZ_AP018254.1|WP_096620400.1|754623_755121_-|hypothetical-protein
MLRRFILVSGLIAATALGFAGRASAQVSETFEARFSGGINDACTLGDPATTTGETASGTLTYDTANRRFTGSLANPIAINCSGGTLEASVTEGTNPTPAESVVATVSDGTNTATANLTTSDEFTVANSATGLTVGLEVTFPADPAPAPTSGAYTYVVTLTGTSAQ
>NZ_AP018254.1|WP_096620410.1|768757_770008_-|glycosyltransferase
MPHIGLYCPAETGHLHTMLPLGQELQRRGHLVTFLGVPDAEEKVRTAQLDFMPIGATKFPLGTTEAMFAKLATLSGIRALLFTLNWIRESGKVFLEEAPSVLKQAQVDILIVDQITPEGGTVADFVGIPFVTVCSALPMMQESSIPPFFTTWVYSQSMWNRWRNKLVYQLINPFNLPSQKLRQKYRLKWNLPRENSPDSPYLILSHQPVGFEYPRQNLPQHFYFTGPYHNQQSRRKVDFPWDELVEGKPLIYASMGTLQTGLKQVFAKIAGACADLDAQLVISLGGSGDLDGWKNLPGKPLVVNYAPQLELLQRAKLFITHAGMNSALEALTYGVPMVAIPITNDQPGIAARIVWCGVGELVPLGQLTVSNLKLAINRVLNQLSYKQKALELQAEIRQSGGVVQAADLVEGILWKK
>NZ_AP018254.1|WP_096620411.1|770851_771496_+|50S-ribosomal-protein-L3
MSVGILGTKLGMTQVFDEAGVAIPVTVVQAGPCTVTQVKTKQTDGYSAIQVGYREVKPKALNKPLLGHLSKSSAPPLRHLREYRTANAEEYSLGQQITADIFSPGQLIDVSGDSIGRGFAGYQKRHHFGRGPMSHGSKNHREPGSIGAGTTPGRVFPGIRGAGRLGGKKVTVKKLTVVRVDAERNLILIKGAVPGKPGALLNIVPANLVTRKSK
>NZ_AP018254.1|WP_096620412.1|771570_772203_+|50S-ribosomal-protein-L4
MFECVVKNWQGEQVGQTTFELRVAKEETASHVVHRALVRQMNNARQGTASTKTRSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFGPKPRDYDIKMNRKERRLALRTAFASRVDDIIVVEEFDSQFERPKTKELVNAIARWGCDPDSKALLITGEKSEGVYLSARNVENVKLILATNLNVYDLLHADKIIVTPSALAKIQEVYGG
>NZ_AP018254.1|WP_096620413.1|772195_772522_+|50S-ribosomal-protein-L23
MGKLVTEFDPRSLADLIRRPIVTEKATLLMEQNKYTFEVAPKATKPEIKAAIETIFEVKVTKINTLNPPRKKRRVGRFIGYKPHYKRAIVTVAAGDEEKIRQVLFPEV
>NZ_AP018254.1|WP_096620414.1|772782_773646_+|50S-ribosomal-protein-L2
MGTRSFRPYTPSTRQLTVSDFSEITKSEPEKSLTVHKHRAKGRNRQGVITCRHRGGGHKKLYRIIDFKRDKRNIPAKVAAIEYDPNRNARIALLFYQDGEKRYILQPNGLKVGTTIIAGPDAPIEDGNALPLMNIPLGTVVHNVELTPGKGGQIVRAAGAGAQVVAKEGDYVTLKLPSTEVRMVRRECYATIGQVGNTDYRNLSAGKAGRTRWKGRRPQVRGSVMNPVDHPHGGGEGRAPIGRSGPVTPWGKPALGLKTRKRKKASDQFIVRRRRKVSKRGRGGRES
>NZ_AP018254.1|WP_096620415.1|773752_774031_+|30S-ribosomal-protein-S19
MGRSLKKGPFIADHLLKKIEKLNANNKKEVIKTWSRASTILPMMVGHTIAVHNGKQHVPVFISDQMVGHKLGEFAPTRNYRGHAKSDKKSGR
>NZ_AP018254.1|WP_096620416.1|774033_774393_+|50S-ribosomal-protein-L22
MATKTLQPNEVKAVAKFVRMSPYKVRRVLDQIRGRSYREALIILEFMPYRACDPVLKLLRSAAANAEHNAGLDRASLKITQAYADGGPSLRRFQPRAQGRAYQIRKPTCHITLAVAAED
>NZ_AP018254.1|WP_096620417.1|774468_775224_+|30S-ribosomal-protein-S3
MGQKIHPVGFRLGITQEHKSQWFAEPSRYPELLQEDYKLRSYIEEKLGRYAQNNAGISDVRIERKADQIDLEVRTARPGVVVGRGGQGIDSLRTGLQDLLGGTRQIRINVVEVQRVDADAYLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGVQGIKVQVSGRLNGAEIARTEWTREGRVPLHTLRADIDYSYVTAKTIYGILGIKVWIFKGEVIPGQEDIQVPPANREREPRRRNQQRRRQQFEDRSNEG
>NZ_AP018254.1|WP_096620418.1|775340_775772_+|50S-ribosomal-protein-L16
MLSPRRTKFRKQQRGRMKGLATRGSTINFGDFALQAQEPSWITSRQIEASRRAMTRYIRRGGKIWIRIFPDKPVTMRPAETRMGSGKGSPEYWVAVVKPGRILFEIAGVAEETAREAMRLAAYKLPIKTKFIVREQDIVSEEG
>NZ_AP018254.1|WP_096620419.1|775776_776010_+|50S-ribosomal-protein-L29
MALPKIAEARELSDEKLAEEILAVKRQLFQLRLQKATRQLEKPHLFRHARHRLAQLLTVEGERKRAAAHQASDSSDS

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Crispr_ID: NZ_AP018254_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_8

1115350-1115841

Orphan

Consensus_repeat	Method
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CRISPRCasFinder
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CRT

6 spacers

The CRISPR arrays of NZ_AP018254_8

>merge|NZ_AP018254|8|1115350-1115841|PILER-CR,CRISPRCasFinder,CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCCCTCCCTTACCTGGGGGCGGCTCCTCAGTAAACAAATCACTTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACATTTTGATGGCTTCTTCTCTGCACAGAGACTTCAACTCCGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACATAAGGCTGGATCTACTTTCCAGCTTTGGAAATTTTTCATTTTTTATGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACATTAGATACCCTTCCATCTCTTCTCTTTCTAAATCAAGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACATCTATTGACCAGAGTCCACTTCCGATATATACTGGCGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCACCCACACCAACCCCAACCCCACCAACACCCACAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|8|1|1115350-1115841|PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCTCCCTTACCTGGGGGCGGCTCCTCAGTAAACAAATCACTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATTTTGATGGCTTCTTCTCTGCACAGAGACTTCAACTCCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATAAGGCTGGATCTACTTTCCAGCTTTGGAAATTTTTCATTTTTTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATTAGATACCCTTCCATCTCTTCTCTTTCTAAATCAAG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATCTATTGACCAGAGTCCACTTCCGATATATACTGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CACCCACACCAACCCCAACCCCACCAACACCCACA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|8|8|1115350-1115841|CRISPRCasFinder
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCTCCCTTACCTGGGGGCGGCTCCTCAGTAAACAAATCACTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATTTTGATGGCTTCTTCTCTGCACAGAGACTTCAACTCCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATAAGGCTGGATCTACTTTCCAGCTTTGGAAATTTTTCATTTTTTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATTAGATACCCTTCCATCTCTTCTCTTTCTAAATCAAG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATCTATTGACCAGAGTCCACTTCCGATATATACTGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CACCCACACCAACCCCAACCCCACCAACACCCACA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|8|1|1115350-1115841|CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCTCCCTTACCTGGGGGCGGCTCCTCAGTAAACAAATCACTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATTTTGATGGCTTCTTCTCTGCACAGAGACTTCAACTCCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATAAGGCTGGATCTACTTTCCAGCTTTGGAAATTTTTCATTTTTTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATTAGATACCCTTCCATCTCTTCTCTTTCTAAATCAAG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATCTATTGACCAGAGTCCACTTCCGATATATACTGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CACCCACACCAACCCCAACCCCACCAACACCCACA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780639.1\|1116834_1116984_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625908.1\|1121662_1122520_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_AP018254.1\|WP_096620646.1\|1110149_1110869_-\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|365959
NZ_AP018254.1\|WP_096620652.1\|1117575_1119282_+\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962
NZ_AP018254.1\|WP_096620651.1\|1117105_1117537_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319965
NZ_AP018254.1\|WP_096620644.1\|1106743_1108636_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	unknown	unknown	gnl\|CDD\|236008
NZ_AP018254.1\|WP_096620641.1\|1102369_1102918_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|226213
NZ_AP018254.1\|WP_096620645.1\|1109142_1109943_-\|nickel-pincer-cofactor-biosynthesis-protein-LarB	unknown	unknown	gnl\|CDD\|224605
NZ_AP018254.1\|WP_096620643.1\|1105042_1106602_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|180945
NZ_AP018254.1\|WP_096620654.1\|1121031_1121520_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_AP018254.1\|WP_096620649.1\|1113549_1114746_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100085
NZ_AP018254.1\|WP_096625910.1\|1122942_1124031_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
NZ_AP018254.1\|WP_096620655.1\|1124205_1125330_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_AP018254.1\|WP_096620642.1\|1103297_1104623_-\|CO2-hydration-protein	unknown	unknown	gnl\|CDD\|213671
NZ_AP018254.1\|WP_096620647.1\|1111547_1112825_-\|murein-transglycosylase-A	unknown	unknown	gnl\|CDD\|225377
NZ_AP018254.1\|WP_096620653.1\|1119436_1119700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620648.1\|1112858_1113116_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780640.1\|1120394_1120565_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620650.1\|1115859_1116585_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223620
NZ_AP018254.1\|WP_096625906.1\|1100841_1102017_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096625908.1\|1121662_1122520_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	1.0479e-73
NZ_AP018254.1\|WP_096620646.1\|1110149_1110869_-\|DnaJ-domain-containing-protein	gnl\|CDD\|365959	pfam00226, DnaJ, DnaJ domain. DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.	6.75131e-17
NZ_AP018254.1\|WP_096620652.1\|1117575_1119282_+\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	9.083e-13
NZ_AP018254.1\|WP_096620644.1\|1106743_1108636_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	gnl\|CDD\|236008	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated.	0
NZ_AP018254.1\|WP_096620651.1\|1117105_1117537_+\|lactoylglutathione-lyase	gnl\|CDD\|319965	cd16358, GlxI_Ni, Glyoxalase I that uses Ni(++) as cofactor. This family includes Escherichia coil and other prokaryotic glyoxalase I that uses nickel as cofactor. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event.	1.07285e-81
NZ_AP018254.1\|WP_096620641.1\|1102369_1102918_-\|NYN-domain-containing-protein	gnl\|CDD\|226213	COG3688, COG3688, Predicted RNA-binding protein containing a PIN domain [General function prediction only].	9.04062e-67
NZ_AP018254.1\|WP_096620645.1\|1109142_1109943_-\|nickel-pincer-cofactor-biosynthesis-protein-LarB	gnl\|CDD\|224605	COG1691, COG1691, NCAIR mutase (PurE)-related proteins [General function prediction only].	9.44719e-123
NZ_AP018254.1\|WP_096620643.1\|1105042_1106602_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|180945	PRK07363, PRK07363, NADH-quinone oxidoreductase subunit M.	0
NZ_AP018254.1\|WP_096620654.1\|1121031_1121520_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	9.73786e-07
NZ_AP018254.1\|WP_096620649.1\|1113549_1114746_+\|site-2-protease-family-protein	gnl\|CDD\|100085	cd06164, S2P-M50_SpoIVFB_CBS, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation. In this subgroup, SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain. SpoIVFB is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.	1.78164e-79
NZ_AP018254.1\|WP_096625910.1\|1122942_1124031_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.09192e-124
NZ_AP018254.1\|WP_096620655.1\|1124205_1125330_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.14507e-161
NZ_AP018254.1\|WP_096620642.1\|1103297_1104623_-\|CO2-hydration-protein	gnl\|CDD\|213671	TIGR01964, chpXY, CO2 hydration protein. This small family of proteins includes paralogs ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations. [Energy metabolism, Photosynthesis].	0
NZ_AP018254.1\|WP_096620647.1\|1111547_1112825_-\|murein-transglycosylase-A	gnl\|CDD\|225377	COG2821, MltA, Membrane-bound lytic murein transglycosylase [Cell envelope biogenesis, outer membrane].	9.03874e-129
NZ_AP018254.1\|WP_096620650.1\|1115859_1116585_-\|HAD-family-hydrolase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	8.32739e-37
NZ_AP018254.1\|WP_096625906.1\|1100841_1102017_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	1.41695e-56

>NZ_AP018254.1|WP_096620649.1|1113549_1114746_+|site-2-protease-family-protein
MQTSWKIGSLFGIPLYLDPLWFVIFAVVTLNFGFAYQNWGSVLGWSAGVVMALLLFGSVLLHELGHSLAAQSQGIKVNSITLFLFGGIAAIEEESKTPAKAFQVAIAGPLVSVGIFFLLNLVKNFLPEQTISQVVIHDLARINLVLALFNLIPGLPLDGGQVLKAALWQATGDRFAAVRGAARIGQILGYGAIALGLLVDYLTSDFGTGLWIALLGWFGIRNATNYLRVTTLQQTLLRINAGEVMTRNFRVIDAHQSLRDFTDMMLLANNHQEIYFAEADGRYRGLVQPEQIRRIERSAWETTTLEAIITPLLEIPSVEESARLADVIIKLAEAEVSWITVLSPAGAVAGIIDKGDIVSHLAEKLKLRISKEDIQRIKAEGNYPPGLQLDLLAKSAVN
>NZ_AP018254.1|WP_096620648.1|1112858_1113116_-|hypothetical-protein
MPRTPNEYVVHLMMESGHREEVRFPTIQEFQKWYSGELMPKAGSDDFINVPIKNIQGEYMVVRPSRVVAIRVEPFFSSSVERFVE
>NZ_AP018254.1|WP_096620647.1|1111547_1112825_-|murein-transglycosylase-A
MRKTLALLGLSFGFAAVVPLVSAIAQGSVVISTIPVPAPLPTNPPPVTQPTQPVEPVAQPPLKLLPIDVDCHPAHGCLGWDEQIFGGGVTRRGDRQALLTAIDHSLSYLNRPSARAAYANYPVEGITHDRVVRSLRRFRQLVANAKSPAELQRAVRREFNFYKSVGNDGRGTVKFTAYYEPIYTASRRRTAEYRYPIYRLPDDFSNWPKPHPRRIDLEGADGLLGDRSPLRGLELLWFRNRMDAYMIHIQGSAQIRLVDGGTTSVGFAGATDYPWTSIGRELAKDGKLQLSGLTMPVLLKYFKDNPQEMDNYLPRWERFIFFREKRGEPARGSIGVPVTPERSIATDKSLMPPGALALVHTRLPFPDNNGRLVFRTVSRFVLDQDTGSAIRTPGRVDYFMGTGKLAGDRAGITGGNGTLYYLLLK
>NZ_AP018254.1|WP_096620646.1|1110149_1110869_-|DnaJ-domain-containing-protein
MELVDCYRMLGLRSGATFADVKASYRRLAQQYHPDINPNDQKAKEKFIALTEAYKFLLQVIPTTVGSAHAPNPTVTNVPKSPSSSKHPSPPKPHHQSVKSTHTPQTNHRQTVKTATKTRPKAPHQPVAEQKSPTQPPNAREVEMRLKWNTYHQLQGFLRDRRFPQAIALAEALAERLPDDVEVRQWQAISYQLWGRALINEKQWLKARIYLKKALKTDPNNKTLCQLVQQDFQRLEQVF
>NZ_AP018254.1|WP_096620645.1|1109142_1109943_-|nickel-pincer-cofactor-biosynthesis-protein-LarB
MNQHNYGNENLRSLLEQVANGSLSTAEALEQLRYFHYEPVGEFAKIDHHRQLRTGFPEFIWGQDKTPTQIAQIMAVMHQKNPVVIATRISTEVYTALQPQVRALKYFEMAKIAAIAPDVITPVYPGSIGILTAGTADLPVAEEAAVTAELCGFTVQRLWDVGVAGIHRLLSHRHVIDSASVLIVVAGMEGALPSVVAGLADVPVIAVPTSIGYGASFGGIAPLLTMLNSCATGIGVVNIDNGFGAAILAGQILRTAQKLTIKGNRE
>NZ_AP018254.1|WP_096620644.1|1106743_1108636_-|NAD(P)H-quinone-oxidoreductase-subunit-F
MTQYLLDTVWLVPLYALLGGIMALPWSPGIIRRTGPRPAGYVNLVMTLLAFLHSSLALGIIWDEPAKKVVIPWLSTAGLNLAIELEISAISVAALVMVSGLNFLAQIYAVGYMEMDWGWGRFFSLLGLFEAGLCALALCDNLFFSYVVLEILTLGTYLLVGLWFSQPLVVTGARDAFLTKRVGDLFLLMGVLGIYPLAGTWNYSDLEAWAASSPSVNPFIISLVCFGLIAGPMGKCAQFPLHLWLDEAMEGPIPSTILRNSVVVASGAWVLIKLQPVFSLSPIASSVMVGIGAVTAVGASLIAIAQIDVKRCLSYSVSAYLGLVFIAVGTQQDEAALLLVLSNALSAGLLVMAVGGIVWNSITQNVTQLGGLWTRRPISGISYLVGAAGLIGLPPLAGFWAMLELGSNLWSTQPALVGVLIVVNGLTAFSLMREFCLIWGGKPKQMSERSPEVSWQMTLPMVIALGFVLHAPIILNNVHLLPSWVNLNQDVALLLIWSSIFGGSISAVIYLSDFIHKPIRLPLQPLQNLLAYDFYTPKLYKMSIVLGVDLLSRFADMLDRFVVDGIVNLVGLISIGGGEGLKYSNTGQTQFYALTVLMGVSLLGAIVTWQFWGDSFLDLMSGSVSMISMK
>NZ_AP018254.1|WP_096620643.1|1105042_1106602_-|NADH-quinone-oxidoreductase-subunit-M
MLSTLIWLPIIGAILIGFIPTRLMSATQVRLVALLVSGFTFLWNLLILGKFDINNPGMQLTEYLPWNETLGLGYQLGVDGLSILLLILNSLLTWIAVFSSRKGIERPKLFYAMILLVSGGVAGAFTAQNLLLFFLFYEFELIPFYLLISIWGGEKRFYAGTKFLIYTAVSGALILATFLGLVWLTGAKSFAIDAISVQGLSTTLQVVLLIGIVLGFGIKIPIIPLHTWLPDAYVEASAPVAILLGGVLAKLGTYGLLRFGMVMFPQAWSLIAPTLAIWGAVSAMYGAVTAIAQKDIKRMVAYSSIGHMGYILLASAASTPLSLVGAVAQMFSHGIILAILFHLVGVVETKVGTRELEKLNGLMSPIRGLPLTSALLVLGGMASAGIPGMTGFIAEFIVFQGSFAVFPIPTLLCVIATALTAVYFVILLNRTCFGRLDNNSAYYPPTLWYEKAPGLILAALILFLGIQPSWLVRWSEPTTTAMVATIPNFGENTGYRIQDTGDRKQEIGEGRQLISSSLN
>NZ_AP018254.1|WP_096620642.1|1103297_1104623_-|CO2-hydration-protein
MVQTQEQPKTKLPPSTHEFAEIIHRLEAGGSMLPDTPENLMQIIGIYKAYAVPMDFYWRDLLYIAEQVFLNPFPFFKYFISDEYLQRHNHYAGDDADLRIWRGVATAHPELLAFMEKGETGRKMPKLFHHLFHDRINMEFAEACMRAMLWHRHMYAPVNQFDAYLDSEEYRTNADRAIKAYFQGNPAMMALYKLFPDMFLEQCRQASYYANLGLFWEVMAPVFFEMSDIYDEGGFKGVPDAMNFLVNGIFAIAGRPIYHHVYIKGECYEIIPKSKGFTWLYEAALPYVEAVFYRTAPFRGTKSYNAQAGQVPDDQKDFHYGILYADVFPVGTAGIPPTLLMQDMLHFLPQYLVDYYKQHCRGEDDMLIQLGISFQRSMYNVTSAVIQALRTALLYPLDDPNPRHLQANREFFEAQINRFCRPEYGMRDAAKLRDIQRQDYR
>NZ_AP018254.1|WP_096620641.1|1102369_1102918_-|NYN-domain-containing-protein
MSSSPPPAILLVDGYNIIGAWSCLQKTCKRDGLEAARDELIESITSYSAFVGYETHIVFDAHYQNTCSHRQVITELVSVYYTDFGQTADTYIEKVCASMRTQLANSLVSRVIVATSDRAQQLVVQGYGAEWMSAQQLCFDVQATVCHRRKTYRPRKQSQGRFLANSIDAKARQKLSELRMSL
>NZ_AP018254.1|WP_096625906.1|1100841_1102017_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTPTSHFRKHWLIDPAIVFLNHGSFGACPRIVLQKQAYLRSQLENEPLRFFMRDWEPLLDQSRVCLASFVGADPEDVVFIPNATTGINAVLRSLDINTGDELLTTNHEYNASRNALDYVAQRYGAKVVVVDVPFPIQEKQQVITAVMDGVSDKTRLVLIDHVTSQTGLIFPIQELTQQLGSQGIETLVDGAHAPGMIPLKLRELGATYYTGNCHKWLCAPKGAGFLYVQRDRQAKIRPLSISHGANSSRTDKSRFQLEFDWTGTDDPTPYMCVPEAISLMGSWFQGGWDELMQHNHNLVITARKLISDAFSHQVLAPESMLGSMAAIPVPDGLQVWNYLDLHDVLLDKFGIEVQIVPWQFPPGLLVRVSAQIYNSINDYHKLIAALQEISK
>NZ_AP018254.1|WP_096620650.1|1115859_1116585_-|HAD-family-hydrolase
MPKIKCGDVVFSNIEAVIFDKNGTLEDSETQLINWAKVSANYLNQKFPGIEQSLLKVFGVNGNSLDVAGLMAVASRYETEIATASHIVQTGYSWFESLQIAREALDTAETVVGIPAPMFAGCREILEKLAANNYKLGILSAATTHEVQVFVQEHELGEYIQLAMGVDGGISKPNPQLLINACQKLGVEVHQTLMVGDSIGDMQMAKNAGAAGCIGITWIGNPSHVYGADVVIHQLADIQVI
>NZ_AP018254.1|WP_157780639.1|1116834_1116984_-|hypothetical-protein
MREASYVIRNSLRQAASRLRNSLRQRFAYVIPATREASYVIACGNASPT
>NZ_AP018254.1|WP_096620651.1|1117105_1117537_+|lactoylglutathione-lyase
MRLLHTMLRVGNLEKSLKFYCDVLGMKLLRQKDYPGGKFTLAFVGYGDESENSVIELTYNWGVEKYDLGNAYGHIALGVDDIYATCEKIKSLGGVVTREPGPMKHGSTVIAFVEDPDGYKIELIQMSTHADSTPPTAPATATT
>NZ_AP018254.1|WP_096620652.1|1117575_1119282_+|iron-uptake-porin
MKDRGGQQQYIKQVLTVGSCLISSLWTQLGVSALGGEVEVNSPSSPQSPQDSRKDKQLEVGSHFDSPFDTLAIAPPELDLARQKLEFSPLQIQISQDVEEESPQQLMENLPSVADLSDVKPTDWAYQALKSLVERYRVIAGDTNRKFRGNQPLTRYEFASALARTFSAVQDLLADALEEYVREDAIIIQRLRREFAANLQELEKRIDRTEVRAAEIQANLFSTTTKLKGQTIITATGGINTRNQIVARSRLSLHTSFRGRGGLITELEAGNRGNNTIGQEPGDRIDLLGNQGIFADGSGLKYAQLSPDLRLRRLAYSFHPHQDLTVTIGAKISPRDFIDQNSYAGNEAINFSSGLFLNNPLIIQNQIDRQGGAGVAVNWQPKQSSLAARGLYIAANADNPDGETNQGLFGNNRQGSLEVEFQPTDQLKVKLQYTNALVNSTDINAFGLNAEYKFNRNLGVFGRVGIGKYEGFNTRLNRDLNIHPLSWSVGVGLRNVVIPTTLAGIAIGQPFVTNDIGNATQTNLEAFYNLPLSDYMSVTPIFSLVINPDNDSSNGTIWQSSLRTVFSF
>NZ_AP018254.1|WP_096620653.1|1119436_1119700_-|hypothetical-protein
MLKHYILSLNPTAKHEWDRCVLREPLTAKRPDIARIVADAVGSQQGNYLVSVNIEVQVLEHVSPPQIEQLSLNIAPTPEKSQLREAA
>NZ_AP018254.1|WP_157780640.1|1120394_1120565_+|hypothetical-protein
MFEIAAGEKQRNKERASINWRFQTTDARRKMGRLYPPVSPIKVELVYDNPAAITPL
>NZ_AP018254.1|WP_096620654.1|1121031_1121520_+|VCBS-repeat-containing-protein
MTVLDQLNPLKTPDFNGDRKGDVFWRSELTNQNTVWLMDGPRILQSSFLPSVSDADGWTEVIPADFNGDRKTDVFWRNTKTGQNAIWLMDGGNIAGASFIDSVSVAYRDFDLGDFNGDGKADIFWRNENRGENAIWLMDGFNRLQAEFLVKIPTSQKWIPII
>NZ_AP018254.1|WP_096625908.1|1121662_1122520_-|ABC-transporter-permease
MLVLPTLIIFQLSLVPGIRPGELVNPGGVSSFWEFILRWGEDGYLRRVWFALTENYRRILDPLFLQVIWRSLILAASTSIICLLLGFPVAYWITQIAPKRWRTLLLLGFVLPLWTSSLLRTYAWITILRPSGLLNLVLNNFGLPSLQILDTLPAVVIGMSYSLLPYMVLILYASLEKLDTRLLEAAADLGANPFQAFWRVTIPQVRTGIFAGGFMVLITALGDFVNPELLGGVSSMTAARLIYTQFLGASKNWGFGSALSMTLIFAVSIAIALLIKFGDTSVRSK
>NZ_AP018254.1|WP_096625910.1|1122942_1124031_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MMFRRRFIQTISACAGLTLTGCGWRLADVRATTPIKGSRDQLYLYTWTQYADEKSILKNFTTQTGIRLFADVYESNDAMLAKVQAGGGGAYSVIYPSDYVVEQMLNGGLLAKIDRSRLIGLENLLPQFQNPIYDPNNSHSIPFTWGTTGLIYNSEILSQPPQDWEYLWQNRDRLTKRITLLDDKREVMGAVLKMLGYSYNSTQEREIEQAYNKLQELKPAIAAFDTDAWRNRILAGDLYLAMCYSGDAIKITKENPKFKYVIPKSGTSLWTDTMVIPITAPNPDGAYEWINYTLQPDVSAKFVTTQSLATPNRLAFESLPTRYKNNTSLFPPEDVLEKCDRIADIGDVDAVYERYWTKLKSG
>NZ_AP018254.1|WP_096620655.1|1124205_1125330_-|ABC-transporter-ATP-binding-protein
MSQAVTQNTSQMMAQVPFDVELRNVFKFFNKEPAVHGIDLEVRQGEFFSILGPSGCGKTTTLRLIGGFETADAGKVVICGETMTNTPPYRRPVNTVFQSYALFKHLNVGENIAFGLRLQKLPKVEIEKRVKEVLAKVKLEGLRSRFPHQLSGGQQQRVALARALVNQPTVMLLDEPLGALDLKLRKEMQLELSTLQKELGMTFVMVTHDQDEALSMSDRIAVMNRGKIEQVGTPSEIYERPHTAFVAQFIGDTNLLTGDIVGVDSNLIQVLTKGGLKLTVTRNGDTPSELGKNISVSIRPEKVQLSLYKPSIPTNCFEGKVINTMYMGTHVNYVIELANQTHITAMQPNTVGILPDSDTPIYAFWLEGDCLAFS

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Crispr_ID: NZ_AP018254_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_9

1223637-1224131

Orphan

Consensus_repeat	Method
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	PILER-CR
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CRT

6 spacers

The CRISPR arrays of NZ_AP018254_9

>merge|NZ_AP018254|9|1223637-1224131|PILER-CR,CRISPRCasFinder,CRT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACAGCCAGCGCAGCCCACACCAGCGCAGCCCACACCCGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACTTTGCGTTAGTAGACTCGGCTTGCTAACGCAAGAAGAAAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACGAAACTCTCCAAAAAGAGGGTTTCAAGGTCACTACGAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCGTCCCGGAGACCATCAAAATCTCCAGGGGCGATGCCGTCAACGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACTGGAAACCGTAATGTTGGTGTAAACTCCATTGAAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCGGATTGTCTACTGTTTCTGGACGGGACTCCATAAAGGAGATTCCGTCCTTGACGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACA

>NZ_AP018254|9|2|1223637-1223970|PILER-CR
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	AGCCAGCGCAGCCCACACCAGCGCAGCCCACACCC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TTTGCGTTAGTAGACTCGGCTTGCTAACGCAAGAAGAAA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GAAACTCTCCAAAAAGAGGGTTTCAAGGTCACTACGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CGTCCCGGAGACCATCAAAATCTCCAGGGGCGATGCCGTCAAC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|9|9|1223637-1224131|CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	AGCCAGCGCAGCCCACACCAGCGCAGCCCACACCC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TTTGCGTTAGTAGACTCGGCTTGCTAACGCAAGAAGAAA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GAAACTCTCCAAAAAGAGGGTTTCAAGGTCACTACGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CGTCCCGGAGACCATCAAAATCTCCAGGGGCGATGCCGTCAAC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TGGAAACCGTAATGTTGGTGTAAACTCCATTGAA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CGGATTGTCTACTGTTTCTGGACGGGACTCCATAAAGGAGATTCCGTCCTTGAC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACA

>NZ_AP018254|9|2|1223637-1224130|CRT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	AGCCAGCGCAGCCCACACCAGCGCAGCCCACACCC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TTTGCGTTAGTAGACTCGGCTTGCTAACGCAAGAAGAAA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GAAACTCTCCAAAAAGAGGGTTTCAAGGTCACTACGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CGTCCCGGAGACCATCAAAATCTCCAGGGGCGATGCCGTCAAC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TGGAAACCGTAATGTTGGTGTAAACTCCATTGAA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CGGATTGTCTACTGTTTCTGGACGGGACTCCATAAAGGAGATTCCGTCCTTGAC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620726.1\|1232497_1235281_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|273634
NZ_AP018254.1\|WP_096620727.1\|1235686_1240213_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227578
NZ_AP018254.1\|WP_096620728.1\|1243796_1245611_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_AP018254.1\|WP_096620729.1\|1245617_1246286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625920.1\|1212667_1215055_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_AP018254.1\|WP_157780648.1\|1211114_1211327_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780650.1\|1225291_1225429_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620723.1\|1225680_1226244_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_AP018254.1\|WP_096620730.1\|1247742_1248186_+\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|143580
NZ_AP018254.1\|WP_096620722.1\|1220985_1222791_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_AP018254.1\|WP_096620725.1\|1228404_1230828_+\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_AP018254.1\|WP_096620721.1\|1218971_1220471_+\|cryptochrome/photolyase-family-protein	unknown	unknown	gnl\|CDD\|225588
NZ_AP018254.1\|WP_096620724.1\|1226235_1227153_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP018254.1\|WP_096620720.1\|1217376_1218903_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780649.1\|1220701_1220881_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620717.1\|1211667_1211943_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225196
NZ_AP018254.1\|WP_096620731.1\|1248292_1249834_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225098
NZ_AP018254.1\|WP_096620715.1\|1208384_1209920_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_AP018254.1\|WP_096620718.1\|1212382_1212568_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620719.1\|1215529_1216879_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366166

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620727.1\|1235686_1240213_-\|hypothetical-protein	gnl\|CDD\|227578	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms].	0.00476268
NZ_AP018254.1\|WP_096620728.1\|1243796_1245611_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	1.9507e-146
NZ_AP018254.1\|WP_096625920.1\|1212667_1215055_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP018254.1\|WP_096620726.1\|1232497_1235281_-\|DUF11-domain-containing-protein	gnl\|CDD\|273634	TIGR01451, unnamed_protein_product, conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.	0.00192098
NZ_AP018254.1\|WP_096620723.1\|1225680_1226244_+\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.68919e-34
NZ_AP018254.1\|WP_096620722.1\|1220985_1222791_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_AP018254.1\|WP_096620725.1\|1228404_1230828_+\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_AP018254.1\|WP_096620721.1\|1218971_1220471_+\|cryptochrome/photolyase-family-protein	gnl\|CDD\|225588	COG3046, COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only].	0
NZ_AP018254.1\|WP_096620724.1\|1226235_1227153_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.88765e-16
NZ_AP018254.1\|WP_096620717.1\|1211667_1211943_+\|hypothetical-protein	gnl\|CDD\|225196	COG2314, XynA, Predicted membrane protein [Function unknown].	0.000320349
NZ_AP018254.1\|WP_096620731.1\|1248292_1249834_+\|AAA-family-ATPase	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	9.46134e-167
NZ_AP018254.1\|WP_096620715.1\|1208384_1209920_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.69967e-21
NZ_AP018254.1\|WP_096620730.1\|1247742_1248186_+\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|143580	cd07176, terB, tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.	9.4111e-26
NZ_AP018254.1\|WP_096620719.1\|1215529_1216879_-\|hypothetical-protein	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	0.00796169

>NZ_AP018254.1|WP_096620722.1|1220985_1222791_-|proline--tRNA-ligase
MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGAGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQLQPADLWRESGRWDTYTKAEGIMFALIDRRDQQVALGPTHEEVITYIARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHADSESLQKTYDDMYIAYSNMLRRCGLKFRAVEADSGAIGGSGSTEFMVLAEAGEDEVLYTEDGKYAANVEKAVSLAGDGEVSPFTSYEKRETPGTETIEKVCNFLQCSPTNIVKNVLYQTVYDNGMTVLVLVSIRGDQEVNEVKLTNELTKLAANYQAKTILSLSVPDADSQEKWATKPLPVGYIAPDISDDYIKPAKNIANKFLRLVDQTAVGLKNFVTGADISGYHVVGANWNEQIKLPETIVDIRKARPGDRAVHDPSQILQSARGIEAGHIFQLGTKYSQAMNATYTNEQGEEKPLVMGCYGVGVSRLAQAAVEQSYDKDGIIWPVAIAPYHAIVTVPNINDTEQMEVGEKLYTELNKAGIETLLDDRNERAGVKFKDADLIGIPYRIVTGKALKDGKVEVVQRATKQAQEIPLDEVVSTLQNWIQEAVK
>NZ_AP018254.1|WP_157780649.1|1220701_1220881_-|hypothetical-protein
MKKSPSTSWWKYPDPQVLNLKILAFDTKLCIGAGDTKFTLQLTSLSLIEAQIRAKPLDL
>NZ_AP018254.1|WP_096620721.1|1218971_1220471_+|cryptochrome/photolyase-family-protein
MTVGIWILGDQLSQKQAALTSCHPEKVPVILIESLEHIRTRPYHRQKLVLIWSAMRHFAEELRQQGYPVTYEVAAADFQKPLIAWLKANHITELRVMQPADRPFRQFIMAMQSQLPCSIQIIPNNHFLWSTSDFQKWANGKKSLLLESFYREGRKRLQILMVDNQPVGGEWNYDKQNRQPPPRNLITPQPKVFPADEITQAVIHQVKSLDIPTFGEINNFNWAVTRNQALAVLADFIDGKLAQFGPYQDAMVTGENTMWHSLISPYLNIGLLHPLEVIQAAETAYYQQQIPLNSVEGFIRQILGWREYMYGLYNYVDSDYPQQNYFQHHQPLPEFFWTGKTKMNCLHQVLKQTINTGYAHHIQRLMVLSNFALIAGISPQAVENWFHAAFIDAYDWVMQTNVIGMGLFADGGILASKPYAASANYIHNMSDYCRNCSYDRKSRTGSQACPFNYFYWDFLDRHRDKLTKQGRMSFILKNLDKMPETELAEIRDRAQKWHE
>NZ_AP018254.1|WP_096620720.1|1217376_1218903_+|hypothetical-protein
MSLPFIFDVAIGLIFIYLILSLLASEIQELLATVFQWRAEHLRKSIENFMAGDVSDISDARVIQLVNDIYANPLIKSVNQQAKGVIANIPRRLTWGIGSVYRSINPRANRARSNDTVFGNGRHSGPSYIPPDVFASSLVDTLNLPTFAQKISTSRLEQFKAQVLEEIQNQLFQLEEQSVVDETLQSFLNLAYQAFAKLQAEFEQIIWNYERNQVTLDVGMNTMRSSLDKYIQFFQEEKPSDNFSYKALQNLQNIRQQSFADIEQTISVRGLRPTLQQVAGILDKGSDIYEEVSKTLAEKDSELYKNLETLTERLPEGLARNIMAIAKKTQLTVSSTQKEVNDFRLEIEKSFNNSMERASGVYKRNAKGIAILIGILIATSSNADAFHMISRLSKDSALRATITENAGRIVLENRNNLGYVDINTLRSQTDEALNDIALPIGWSDANLQQQINWTRKQQRMFPFWRLITLIPGWIISGIAIGMGAPFWFDLLGKIVNVRNVGKSPSDRN
>NZ_AP018254.1|WP_096620719.1|1215529_1216879_-|hypothetical-protein
MGKNTVILIHGYADRGESFQEWRDQLIQRGYQVKSLSYTTLSDEVTIKDIADGFERALNLPGGLAADEQFDAIVHSTGMLVVRTWLTAYPSRRQRLKRLIGLAPANFGSPLAHRANSWFGKIMQGNRQKGENFLEMGDRVLDALELGSSFTWDLAHQDLSPHSSTSLRGNHPDTPYIFILCGTSEYTGWKKLIRRPGGGTDGTVRWAGCGLQVRKLVVDLTKEQTDTHRVELEDGEIPRISPLIAIAGLTHRDILKHPNHQVIDLVDQALQVSDDTSFREWVATSEEKTQAEWEKIAYWQQFIINAIDQRGDAIPEYEIQLMTKRGGKLEVIPEFKLDMHIYRRDRSLRCFHVNLQPILEQCLDNLWLQISTTSGSSLVYYHGLVSPSEEIISSKGNWSGAIDISKYLEAAKPKIFTPLTTTLIELRLYRQPLENGIEVNHKVCWFLDN
>NZ_AP018254.1|WP_096625920.1|1212667_1215055_+|copper-translocating-P-type-ATPase
MQILSKPDVSPSQSPPTSKIVLDVGGMKCAGCVRSVERELSQYPGVSRVSVNLATEMATVEVENGQTTADALALHLTKTGFPSQPRNLENFSQIGERSQSGGDESEVLFRHLMMASGLLAVSVVGHLSDVFAPHLPIIGNIWFHCGVATLTIAFPGRTILVDGWRSLGRGMPNMNTLVGLGAITAYLASLVALLFPSLGWECFFDEPVMMLGFILLGKTLEARARRKAVGALQQLIALQPQTARLIAKPKQHTPDKVSPLTINTVVEIPANAVKVGEWLQVLPGEKIPVDGEIIDGQTTVDESMLTGESIPVAKKIGDRVTAGTVNQMGTIAVAAVHTGGETTLAQIVALVENAQTRKAPIQYFADRVAGYFTYFVIAAALITFGFWYVYGAHVWQDVPVKMLMMHHSQMAHTPEHNSPLLLSLKFAIAVLVMACPCALGLATPTAIVVGTGLGASQGILIKGGDVLEKVHQLQTVVFDKTGTLTTGKLEVTDCIEFCPPPLPYSLIQLGAAVEQGTSHPLAQAIKTACLQQGGVLPPAVNFHTEPGLGVAAVVEGKQVLVGNREWMAWHGVGINKDVQQQSVSLAATGKTVIYLAVETELVGLIAAHDQLRPEAVDTVAQLQKQRLKVVIMSGDQQPAVNAIARKLNISSDNIIAEVPPAKKAHLIQTFQNQQQIVAMIGDGINDAPALAQADIGIAIASGSDIAIDAAEIILTRNKLSDAIAAIKLSRATFNKIRQNLFWALAYNTFGIPLAAGVLFPTTGFILSPAGAAAFMAFSSVSVVTNSLLLRHRGTV
>NZ_AP018254.1|WP_096620718.1|1212382_1212568_+|hypothetical-protein
MNKPLIQILFAIAGFSYFSFVSYLQLNTLWQGELILIPVQIFAVMYFWQQGQRKSLNIKKN
>NZ_AP018254.1|WP_096620717.1|1211667_1211943_+|hypothetical-protein
MANLTPSHATKQLLSGYAGIICGGFGIHKFILGYHAEASIMLVVSVIGLVFAYGIPFLIMQLVGLIEGIIYLNKEHEDFVETYFVQKQGWF
>NZ_AP018254.1|WP_157780648.1|1211114_1211327_-|hypothetical-protein
MSDTKIIPKTKLMVLFPIYSERANTVIEPHLAVCKLAELHKWFALKNYFALFVFTGLPVYLPEYLTCDTC
>NZ_AP018254.1|WP_096620715.1|1208384_1209920_+|CPBP-family-intramembrane-metalloprotease
MNFKQAILAFLTLVAGLVIGSSLLGSLQEPQVQNRLDLYQTNIVLKASEWERLRSEDGDDSLFSALFGGKSVDEAIQTYREARDTSRANINKILTEIPALSAGENQKSAGAVRQFVRQLEKSLREQRDFLAEVDLNLGILEARQGNLESAQKIWRELAEETGVRLDLVKTARVLEGLWSQPALLLPDSAELIQANLQGWFRNTALSQLYQVQERSEALTQLQQQIQETAEDAVTKLFLVGITPYIMGLVGLGLIVFLLFQRVRWGKEALLARYGDTPWPTPWDGYTILEVLVVGFFLVGQFVAPLLVSAILQFFHLGNDVRSQAIRVFSSYLLVAFAAIAILWNAIRSYFPLESDWFRFRFRSNWILWGVGGYCVAIPVVLIISLLNQQLWQGKGGSNPLLQLVLEGKDTLALSLFFSTAAIAAPLFEELLFRGFLLPSLTRYMSVWGAIGLSSLIFAAAHLSISELLPLFSLGMILGIVYTRSRNLLAPMLVHALWNTGTMLTLLVLGSE
>NZ_AP018254.1|WP_157780650.1|1225291_1225429_-|hypothetical-protein
MSNILNRVLCTSVEKASRLFCAEVARTPVLFSACYTNNARGSENR
>NZ_AP018254.1|WP_096620723.1|1225680_1226244_+|Uma2-family-endonuclease
MVVTKSQILTLEEFLQLPETKPASEYIDGKIIPKPMPQGKHSLLQGELVPAINLIVKPQRIARAFVELRCTFAGRSIVPDIAVFTWSKIPRDANGEVANAFTAAPDWILEILSPDQSATKMIKNILHCLNHGTQMGWLIDPDEQTVIIYLPQQQPEIFDQKEQILPVPDFANGLNLSVEALFGWLLE
>NZ_AP018254.1|WP_096620724.1|1226235_1227153_-|alpha/beta-hydrolase
MAVNQHQHHQTLTYKWQNYQCTYDYHPANPQANQDIPLVLIHPIGVGLSRLFWRRFSQQWQIQNKFNSIYAPDLLGCGDSDMPNIAYTPNFHAEQLNFFLTTVINQPVILVVQGALFPVAIELVTMHPQLIKGMVLSGPPAWNIISKPRPKWRQKLTWSFLSSILGNLFYRYARTEKFLRSFSTRQLFASSQDIDEEWLMMLRLGSVDMASRFAVFSFLAGFWRKDYSTAIANLNIPTFVVFGETASSVSKEGKIESADDRLSQYLTHLPTAQGVKIPGRNVLPYESAPEFVNAIAPFIDQPTLL
>NZ_AP018254.1|WP_096620725.1|1228404_1230828_+|endonuclease-MutS2
MIQSETLELLEWSRLCQHLSNFAATKLGVFAARNIQIPTTLTASEQLLKQTQQVYDLEGRTPTGLSFEGIQDIGDSLERAELKGLLAGDELLAIATTLAGARNLRRTIENHEDLDVLLALVADLRTYPEVEQEIHRCIDERGHVADRASSKLAEVRSEIRRVRSQINQKLQNIIQVKSNALQEGIITQRGDRYVLPVKASHKDVIPGIVHDTSTSGVTLYVEPNSVVPMGNQLRQLLRREEVEEEAIRRALTGQIADIIPDLERLLAIITVLDLACARSRYSQWLKGNPPRFVDPTQEQITLRQLHHPLLLWQQQYEQGHPVVPVDLRIEPHIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFEQVLADIGDEQSLQQSLSTFSGHIRRISRILTAISPGESPEDQDLKSPSPSLILLDEVGAGTDPVEGSALAIALLRYLADHALLTMATTHFGELKALKYEDLRFENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVIAAAKQQMGGVTDDVNLVIAGLEDQRRRQEIKAAEAQNLLQQAEKLYKEVSAKADALQEREQALKASQEAAVQEAIAQAKKEIAQVIRRLQQGTPTGQDAQNATNAINQIAEKFIPQAPPKPKPGYIPKIGERIRIPKLGQTAEVLTAPDADREINVRFGIMKMTVKLDDIESLDGQKPEPSGKETKVKENKTKTESPPAATEPLIRTSRNTIDLRGKRVADAEYILDQAIAQAHRAIWIIHGHGTGKLRQGVHEYLRQHPRVSKYEPAEQADGGTGVTIAYIVD
>NZ_AP018254.1|WP_096620726.1|1232497_1235281_-|DUF11-domain-containing-protein
MKKQLIQTPILLFTTLTSQILPLYLHPPSSPTLAQTTATSCANPGRDTTPLNGIINTYYPGTNNISPGIPNTTINLGTRRGANIDIQAGDLLVIMQMQGTNAGNYEYAVAEQFNGTSVIVRGTGTNGGLNNSYINAPATPTQGQQSFQVIRVPQYLDANLTGIVTAAPWDGTTGGVVVADVARELNFTGSINVSGQGFRGGRGLRLGGRVDWRTNPPTPIDPLPPGVEADYTGVHAPSPTIANINAGVGASGLNGIGANGSKGEGIGGTPRYTFNGDLTAPLPVVEPPEGYPGGSFGRGAVGNAGGGATDGDPFGTNLATIAISRGYNAENSGGGGGGNAGVGGQGGFSWRSKEDVGGRGGNGFTATSSRVILGGGGGAGSNNDGATASNGIASSGATGGGIVLIRAGNIIGNGTVNATGANAPNSRLETTTLNVNDGGGGGGAGGSVVISAVNSTGSNLNINVQGGEGGDVRTRVPHGPGGGGGGGVVLTRNVGQTVNLQGGISGTFINTGDDASETPDIIGDQGTYGATNGSDGVAGNISSITGILSGAECLDAPEPPPQPLIYKSVRLLNDNDNSGNITVGDDLQYTLTIINPSTTLPVNGMAIADRVPGQLQVIRNSILFPTGFTAASSLPNGNFNGTNQYIPFTNPGDLPINTTLTLTYTARILPDATGQIANQAGIDLTPTDPNPIPEILSDASDSLNPTQPGSGNNPGNVIDRNGNINQITGNGVTPDITIVNIQTLPPEPPPPGIVNLYGVKRITNVRRNGVPITEVNFNTFVDDPNDVNDNRGGWSQFLPIGVPTIGNEYPLQSGDEVEYTIYYLVEGNQPINNARFCDPIPVGTTFIPNSFASGRGIGVNMANNMTNPTNVADADNASFLSPVAPLPPGNVCPNQTNPTGTVIVNLGNLDHNQGNNFGFVRFWVRVD
>NZ_AP018254.1|WP_096620727.1|1235686_1240213_-|hypothetical-protein
MKSHKLVDKKLITICTTLPVVSTTSVLAETTGANNIQNPHSLNLVEGELNTGINSISRDKGADLKVSLTNSYPEEGEFRDKVELGGFDNNIKTSVKSISAYFPAKFQQQNLQSGKYPEGKSEDNHKTDLQRHDLKAENKNHQQVNNRIHNPTSKSPNSLISPPELNYPELPQTLSSFPGKTENYQVTLEHKLQQKAEITSDSQSVPLIVNTNQHQELENTPENTTQFTATVDQKNKSIINATNGVIPSSFVDTSITVSDNISQKVVNTKNNTPSHPVNQSTSTIISSNPLNTNNTDISQSITLSPAKTISPQAVNTNNAKNNDISPHPVNSPLSISPPIAEKISPSQQSFLKTNSDYFPDHTASLSTLTNNNPIKTNTAKIHHDQQDKTEELLILTPLSGETTQKTTNLAIQYPSHLQATVTINGKSIDPQLPNHLQTDSIQKLNTQIWYNLPLQIGENTITATLDNGKTSTVKITRQYQQTLILLTPLDEPRIPADGRSTVKIKGQITNTSHEIIREHIPVTLTTTAGKFIGVDNDADAPGFQVIARNGEFTVELQASLEPQNVNVRAAIDNWQQQNIFDTVPQDYTNIEFITNLRPSLATGSINLRIGGGGTNYHGRFRDFLNPRKIGRTDVDLDAAVFATGKIGDWLFTGAYNSDRNLNEDCLGDTRLFGSGQVCERVYPVYGDAGTVTATTPSIDSVYVKLERTPKIPGAESDYFLWGDYHTQEFARPSQLFSGITRQLHGFKGNYNLGNLQVTALFANNIEGFVRDTIAANGTSGYYFLRSRNLVPGSENVFIESEEINRPGTVVKRQSLSRGADYEIDYERGTIMFRSRIFATELNPLGNTLTNRIIIIYQNRGGNGSKLYGGRLQYNFRQQTPHHNIPPRNYKTDTPFLATSYLWEDKNAANWQLLSVDAHIPWGKTGQIIGEYAYSHHNSLALGNMQGSAYRLEATGKITPDLQAKAFYRSVSENFANNATWSFVPGQTRYGASLAGKLSSTTSFHLGYDHEDNFGIAPALRTNSFDLFNPQPQPLPGTKVDNSLTTLRAGIEQKIGDGNIGVEYVNRQRQDRIDNRFHGNASQIRSYGSIPVTASLTFRAQNELNLGQSDALYPNRTTLGLDWNLYPGVTVRLAHQLFAGGLLKGNSITSLDTLFSHQFNQDTSVTGRYSIFSGIDGMNDQAAIGLNHRIRLAPGLKLNLGYERIQNHILGNTAAGIRFAQPYATGQTGFTLGNLSGNSYSIGLDYTDNPNFQANARVEYRDGEGGNNLVISAAAAGKLSTALTAAIRYQQAAGANQLLGDLPNTANLRFGLAYRDPRNDKFNALLGYEYRLNPTTTPETLLTGNGNSSTEHVFAAEAIYAPHWQWEFYGKYAFRNHTSYLADNFTNTSTAHIAQLRATYQLGYRTDVAVEGRWFGQPSVGFNEFAIALESGYYLTPDLRIGVGYAFGSADDRDFTGYRSAGGPYLNITYKINELFAGFGRQKPAPKQQQESEIVVQKTGDRRQDTGGD
>NZ_AP018254.1|WP_096620728.1|1243796_1245611_-|penicillin-binding-protein-2
MKQKYRSRRNWQVPSRVKERLGQQPESHLRGKTGASSQSNNPVIKSRLFMAWGVLIVSGLGLILNLYRLQIVDGATLAQRARNQQMLTLRPYMPRRSIIDRNGNFLAIDQPVYTLYAHPNLFKKSFAEVATALAPILNQEVSDLEQKFQRQKSGIILHQRLSEEDRNRIVQLRLDGLDLRQKYARFYPQDELVAETLGFVNANRKGQAGIEQTQERLLERKLKTLRLNRTRQGVLMPDYAPEGFIDFDDFKLQLTIDSRLQRVARNALKEQIQRYRAKRGAVIVMDAYDGGLLAMVNHPTFNPNEFSKADMSLLKNWTVTDLYEPGSTFKPLNVAIALENGVIQPHDTFVDNGSYQVYDRWIKNAGNKRYGRINIAQILEHSSNIGMVQIIQKMRPHAYYGWLERLGLGQAVQTDLFGSISSRLKPQDEFASTPIEPATASFGQGFSLTPLQLVQMIGALANGGKLVSPHTVKGLVDSEGKIHDAPSFAAPRQIFSPMTTQRVVEMMETVVAGGTGKNARIPGYRIAGKTGTAEKASQSGGYSSARITSFVSILPAQQPRYVVLAIVDEPKGKDAYGGTVAAPISKKVMEALITIEKIPPSLKQ
>NZ_AP018254.1|WP_096620729.1|1245617_1246286_-|hypothetical-protein
MAVTRKSGNNSPNPYISKSGWPGSKPVRRRAPLHVNQINSTANPGQAVVKPELPLSSRQPAPSKKRVPTSSPSPRARANSPEKTAKIQQKIPLMPTLEEVPFWLKKIQQIQRYSSLMTFGLVSATLAVYALNVYSQQSWGMAYQELQRLQKHEQQLTTKNEVLKNQIIREAEKPSTGMVTPTPATAIFIPSAVSGTSSGNNFNQPTEEQPHNFRNQTTPMGY
>NZ_AP018254.1|WP_096620730.1|1247742_1248186_+|tellurite-resistance-TerB-family-protein
MSLFDNILGNNTVENKLTATEAFAAITLVAVACDGYLSDKEAESVCFALSKIHLFQGYSRERINALLEKLLEVLRNNGLNALFNAAKASLSEEMRESAFAIAVDLVLMDGKVTSEEHEFLNDLCQALGIKREMAMQIVQVMMIKHRS
>NZ_AP018254.1|WP_096620731.1|1248292_1249834_+|AAA-family-ATPase
MTDTALPPVIHKMLQADFYPHPVEEPIQLVQTHCSYVLLTGEFVYKVKKPVDFGFLNYSTLAKRKFYCYEELRLNQRGAAELYLEVVAITTSNGDYVLGGEGEAVEYALKMRQFPADGLLSTRFENGTITAGEIEELGRVVANYHRHTETNDYIRSFGTVEKVRESIDQNYEQTEVYIGKAQTLSQFEQTKAYTDNFFATKVELFNQRCANNFIRECHGDLHMGNICCWQGQILLFDCIEFNEPFRFVDVMYDVAFAVMDLQARHRPDLANIFLNTYLEQTGDWEGLQVLPLYLSRQAYVRAKVTSFLLDDSAISPAAKQQAAATAAAYYRQAWEYTQTHQGKIFLMSGVSGSGKSTTAKYISQHSGAILIRSDAVRKHLAGIGLLERGGEEIYTPEMTAKTYGRLSELGILLAQQGWTVILDAKFDRVELRQNVLKPAINAQIPVQIIECVAPESVLRSRLEARTGDIADATADLLTSQLAAAEPFTEEEKNYVKTLDTTSAIAPQLLDWGF

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Crispr_ID: NZ_AP018254_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_10

1224276-1225137

Orphan

Consensus_repeat	Method
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	PILER-CR

11 spacers

The CRISPR arrays of NZ_AP018254_10

>merge|NZ_AP018254|10|1224276-1225137|CRISPRCasFinder,CRT,PILER-CR
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACTCCTAAATAATGACGTGCATTGACAAAGAAATTGTTGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACTGTAGACATTCGTCCTAACAACGACCCCCTCTTTAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACTTGATTGGAAACCAAAATAGAAATAGAGGGTGTGGAGAAAATCATCTGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACATTTGATGGTTATGCTGATTGGGCTGATTATTCAGCGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACGTTTGATGAATTAACGGTTCGTGATGATGATGAATATTTTTGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCTTTCAAACCACACGCCTGAAAGATGGACGGTTGATGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCACATACAACAAGTAGACCATAAAGGAGAGCCATGCAACTAGTGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACGAAAAAGATAATTGAATGGGCAAAAAAGGGTAACGGAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACTCCTTTGCCCCAAAAGGAGTCTACGTTGACCCCTAGACAGGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACAAAAAGAAAACAATGTTAAACAGACTATTGATTTAGGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCTTCACAGCTAGCAGCAATGGGAATGCCCATCGCCCCAACACCGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|10|10|1224276-1225137|CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TCCTAAATAATGACGTGCATTGACAAAGAAATTGTT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TGTAGACATTCGTCCTAACAACGACCCCCTCTTTA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TTGATTGGAAACCAAAATAGAAATAGAGGGTGTGGAGAAAATCATCT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	ATTTGATGGTTATGCTGATTGGGCTGATTATTCAGC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GTTTGATGAATTAACGGTTCGTGATGATGATGAATATTTTT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTTTCAAACCACACGCCTGAAAGATGGACGGTTGAT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CACATACAACAAGTAGACCATAAAGGAGAGCCATGCAACTAGT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GAAAAAGATAATTGAATGGGCAAAAAAGGGTAACGGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TCCTTTGCCCCAAAAGGAGTCTACGTTGACCCCTAGACAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	AAAAAGAAAACAATGTTAAACAGACTATTGATTTAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTTCACAGCTAGCAGCAATGGGAATGCCCATCGCCCCAACACC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|10|3|1224276-1225137|CRT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TCCTAAATAATGACGTGCATTGACAAAGAAATTGTT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TGTAGACATTCGTCCTAACAACGACCCCCTCTTTA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TTGATTGGAAACCAAAATAGAAATAGAGGGTGTGGAGAAAATCATCT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	ATTTGATGGTTATGCTGATTGGGCTGATTATTCAGC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GTTTGATGAATTAACGGTTCGTGATGATGATGAATATTTTT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTTTCAAACCACACGCCTGAAAGATGGACGGTTGAT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CACATACAACAAGTAGACCATAAAGGAGAGCCATGCAACTAGT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GAAAAAGATAATTGAATGGGCAAAAAAGGGTAACGGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TCCTTTGCCCCAAAAGGAGTCTACGTTGACCCCTAGACAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	AAAAAGAAAACAATGTTAAACAGACTATTGATTTAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTTCACAGCTAGCAGCAATGGGAATGCCCATCGCCCCAACACC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|10|3|1224348-1225137|PILER-CR
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TGTAGACATTCGTCCTAACAACGACCCCCTCTTTA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TTGATTGGAAACCAAAATAGAAATAGAGGGTGTGGAGAAAATCATCT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	ATTTGATGGTTATGCTGATTGGGCTGATTATTCAGC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GTTTGATGAATTAACGGTTCGTGATGATGATGAATATTTTT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTTTCAAACCACACGCCTGAAAGATGGACGGTTGAT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CACATACAACAAGTAGACCATAAAGGAGAGCCATGCAACTAGT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GAAAAAGATAATTGAATGGGCAAAAAAGGGTAACGGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	TCCTTTGCCCCAAAAGGAGTCTACGTTGACCCCTAGACAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	AAAAAGAAAACAATGTTAAACAGACTATTGATTTAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTTCACAGCTAGCAGCAATGGGAATGCCCATCGCCCCAACACC
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620726.1\|1232497_1235281_-\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|273634
NZ_AP018254.1\|WP_096620727.1\|1235686_1240213_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227578
NZ_AP018254.1\|WP_096620728.1\|1243796_1245611_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_AP018254.1\|WP_096620729.1\|1245617_1246286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625920.1\|1212667_1215055_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_AP018254.1\|WP_157780648.1\|1211114_1211327_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780650.1\|1225291_1225429_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620723.1\|1225680_1226244_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_AP018254.1\|WP_096620730.1\|1247742_1248186_+\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|143580
NZ_AP018254.1\|WP_096620722.1\|1220985_1222791_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_AP018254.1\|WP_096620725.1\|1228404_1230828_+\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_AP018254.1\|WP_096620721.1\|1218971_1220471_+\|cryptochrome/photolyase-family-protein	unknown	unknown	gnl\|CDD\|225588
NZ_AP018254.1\|WP_096620724.1\|1226235_1227153_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP018254.1\|WP_096620720.1\|1217376_1218903_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780649.1\|1220701_1220881_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620717.1\|1211667_1211943_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225196
NZ_AP018254.1\|WP_096620731.1\|1248292_1249834_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225098
NZ_AP018254.1\|WP_096620715.1\|1208384_1209920_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_AP018254.1\|WP_096620718.1\|1212382_1212568_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620719.1\|1215529_1216879_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366166

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620727.1\|1235686_1240213_-\|hypothetical-protein	gnl\|CDD\|227578	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms].	0.00476268
NZ_AP018254.1\|WP_096620728.1\|1243796_1245611_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	1.9507e-146
NZ_AP018254.1\|WP_096625920.1\|1212667_1215055_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP018254.1\|WP_096620726.1\|1232497_1235281_-\|DUF11-domain-containing-protein	gnl\|CDD\|273634	TIGR01451, unnamed_protein_product, conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.	0.00192098
NZ_AP018254.1\|WP_096620723.1\|1225680_1226244_+\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.68919e-34
NZ_AP018254.1\|WP_096620722.1\|1220985_1222791_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_AP018254.1\|WP_096620725.1\|1228404_1230828_+\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_AP018254.1\|WP_096620721.1\|1218971_1220471_+\|cryptochrome/photolyase-family-protein	gnl\|CDD\|225588	COG3046, COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only].	0
NZ_AP018254.1\|WP_096620724.1\|1226235_1227153_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.88765e-16
NZ_AP018254.1\|WP_096620717.1\|1211667_1211943_+\|hypothetical-protein	gnl\|CDD\|225196	COG2314, XynA, Predicted membrane protein [Function unknown].	0.000320349
NZ_AP018254.1\|WP_096620731.1\|1248292_1249834_+\|AAA-family-ATPase	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	9.46134e-167
NZ_AP018254.1\|WP_096620715.1\|1208384_1209920_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.69967e-21
NZ_AP018254.1\|WP_096620730.1\|1247742_1248186_+\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|143580	cd07176, terB, tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.	9.4111e-26
NZ_AP018254.1\|WP_096620719.1\|1215529_1216879_-\|hypothetical-protein	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	0.00796169

>NZ_AP018254.1|WP_096620722.1|1220985_1222791_-|proline--tRNA-ligase
MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGAGIYAYLPLMWRVLQKVSQIVREEMNATGAQECLLPQLQPADLWRESGRWDTYTKAEGIMFALIDRRDQQVALGPTHEEVITYIARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHADSESLQKTYDDMYIAYSNMLRRCGLKFRAVEADSGAIGGSGSTEFMVLAEAGEDEVLYTEDGKYAANVEKAVSLAGDGEVSPFTSYEKRETPGTETIEKVCNFLQCSPTNIVKNVLYQTVYDNGMTVLVLVSIRGDQEVNEVKLTNELTKLAANYQAKTILSLSVPDADSQEKWATKPLPVGYIAPDISDDYIKPAKNIANKFLRLVDQTAVGLKNFVTGADISGYHVVGANWNEQIKLPETIVDIRKARPGDRAVHDPSQILQSARGIEAGHIFQLGTKYSQAMNATYTNEQGEEKPLVMGCYGVGVSRLAQAAVEQSYDKDGIIWPVAIAPYHAIVTVPNINDTEQMEVGEKLYTELNKAGIETLLDDRNERAGVKFKDADLIGIPYRIVTGKALKDGKVEVVQRATKQAQEIPLDEVVSTLQNWIQEAVK
>NZ_AP018254.1|WP_157780649.1|1220701_1220881_-|hypothetical-protein
MKKSPSTSWWKYPDPQVLNLKILAFDTKLCIGAGDTKFTLQLTSLSLIEAQIRAKPLDL
>NZ_AP018254.1|WP_096620721.1|1218971_1220471_+|cryptochrome/photolyase-family-protein
MTVGIWILGDQLSQKQAALTSCHPEKVPVILIESLEHIRTRPYHRQKLVLIWSAMRHFAEELRQQGYPVTYEVAAADFQKPLIAWLKANHITELRVMQPADRPFRQFIMAMQSQLPCSIQIIPNNHFLWSTSDFQKWANGKKSLLLESFYREGRKRLQILMVDNQPVGGEWNYDKQNRQPPPRNLITPQPKVFPADEITQAVIHQVKSLDIPTFGEINNFNWAVTRNQALAVLADFIDGKLAQFGPYQDAMVTGENTMWHSLISPYLNIGLLHPLEVIQAAETAYYQQQIPLNSVEGFIRQILGWREYMYGLYNYVDSDYPQQNYFQHHQPLPEFFWTGKTKMNCLHQVLKQTINTGYAHHIQRLMVLSNFALIAGISPQAVENWFHAAFIDAYDWVMQTNVIGMGLFADGGILASKPYAASANYIHNMSDYCRNCSYDRKSRTGSQACPFNYFYWDFLDRHRDKLTKQGRMSFILKNLDKMPETELAEIRDRAQKWHE
>NZ_AP018254.1|WP_096620720.1|1217376_1218903_+|hypothetical-protein
MSLPFIFDVAIGLIFIYLILSLLASEIQELLATVFQWRAEHLRKSIENFMAGDVSDISDARVIQLVNDIYANPLIKSVNQQAKGVIANIPRRLTWGIGSVYRSINPRANRARSNDTVFGNGRHSGPSYIPPDVFASSLVDTLNLPTFAQKISTSRLEQFKAQVLEEIQNQLFQLEEQSVVDETLQSFLNLAYQAFAKLQAEFEQIIWNYERNQVTLDVGMNTMRSSLDKYIQFFQEEKPSDNFSYKALQNLQNIRQQSFADIEQTISVRGLRPTLQQVAGILDKGSDIYEEVSKTLAEKDSELYKNLETLTERLPEGLARNIMAIAKKTQLTVSSTQKEVNDFRLEIEKSFNNSMERASGVYKRNAKGIAILIGILIATSSNADAFHMISRLSKDSALRATITENAGRIVLENRNNLGYVDINTLRSQTDEALNDIALPIGWSDANLQQQINWTRKQQRMFPFWRLITLIPGWIISGIAIGMGAPFWFDLLGKIVNVRNVGKSPSDRN
>NZ_AP018254.1|WP_096620719.1|1215529_1216879_-|hypothetical-protein
MGKNTVILIHGYADRGESFQEWRDQLIQRGYQVKSLSYTTLSDEVTIKDIADGFERALNLPGGLAADEQFDAIVHSTGMLVVRTWLTAYPSRRQRLKRLIGLAPANFGSPLAHRANSWFGKIMQGNRQKGENFLEMGDRVLDALELGSSFTWDLAHQDLSPHSSTSLRGNHPDTPYIFILCGTSEYTGWKKLIRRPGGGTDGTVRWAGCGLQVRKLVVDLTKEQTDTHRVELEDGEIPRISPLIAIAGLTHRDILKHPNHQVIDLVDQALQVSDDTSFREWVATSEEKTQAEWEKIAYWQQFIINAIDQRGDAIPEYEIQLMTKRGGKLEVIPEFKLDMHIYRRDRSLRCFHVNLQPILEQCLDNLWLQISTTSGSSLVYYHGLVSPSEEIISSKGNWSGAIDISKYLEAAKPKIFTPLTTTLIELRLYRQPLENGIEVNHKVCWFLDN
>NZ_AP018254.1|WP_096625920.1|1212667_1215055_+|copper-translocating-P-type-ATPase
MQILSKPDVSPSQSPPTSKIVLDVGGMKCAGCVRSVERELSQYPGVSRVSVNLATEMATVEVENGQTTADALALHLTKTGFPSQPRNLENFSQIGERSQSGGDESEVLFRHLMMASGLLAVSVVGHLSDVFAPHLPIIGNIWFHCGVATLTIAFPGRTILVDGWRSLGRGMPNMNTLVGLGAITAYLASLVALLFPSLGWECFFDEPVMMLGFILLGKTLEARARRKAVGALQQLIALQPQTARLIAKPKQHTPDKVSPLTINTVVEIPANAVKVGEWLQVLPGEKIPVDGEIIDGQTTVDESMLTGESIPVAKKIGDRVTAGTVNQMGTIAVAAVHTGGETTLAQIVALVENAQTRKAPIQYFADRVAGYFTYFVIAAALITFGFWYVYGAHVWQDVPVKMLMMHHSQMAHTPEHNSPLLLSLKFAIAVLVMACPCALGLATPTAIVVGTGLGASQGILIKGGDVLEKVHQLQTVVFDKTGTLTTGKLEVTDCIEFCPPPLPYSLIQLGAAVEQGTSHPLAQAIKTACLQQGGVLPPAVNFHTEPGLGVAAVVEGKQVLVGNREWMAWHGVGINKDVQQQSVSLAATGKTVIYLAVETELVGLIAAHDQLRPEAVDTVAQLQKQRLKVVIMSGDQQPAVNAIARKLNISSDNIIAEVPPAKKAHLIQTFQNQQQIVAMIGDGINDAPALAQADIGIAIASGSDIAIDAAEIILTRNKLSDAIAAIKLSRATFNKIRQNLFWALAYNTFGIPLAAGVLFPTTGFILSPAGAAAFMAFSSVSVVTNSLLLRHRGTV
>NZ_AP018254.1|WP_096620718.1|1212382_1212568_+|hypothetical-protein
MNKPLIQILFAIAGFSYFSFVSYLQLNTLWQGELILIPVQIFAVMYFWQQGQRKSLNIKKN
>NZ_AP018254.1|WP_096620717.1|1211667_1211943_+|hypothetical-protein
MANLTPSHATKQLLSGYAGIICGGFGIHKFILGYHAEASIMLVVSVIGLVFAYGIPFLIMQLVGLIEGIIYLNKEHEDFVETYFVQKQGWF
>NZ_AP018254.1|WP_157780648.1|1211114_1211327_-|hypothetical-protein
MSDTKIIPKTKLMVLFPIYSERANTVIEPHLAVCKLAELHKWFALKNYFALFVFTGLPVYLPEYLTCDTC
>NZ_AP018254.1|WP_096620715.1|1208384_1209920_+|CPBP-family-intramembrane-metalloprotease
MNFKQAILAFLTLVAGLVIGSSLLGSLQEPQVQNRLDLYQTNIVLKASEWERLRSEDGDDSLFSALFGGKSVDEAIQTYREARDTSRANINKILTEIPALSAGENQKSAGAVRQFVRQLEKSLREQRDFLAEVDLNLGILEARQGNLESAQKIWRELAEETGVRLDLVKTARVLEGLWSQPALLLPDSAELIQANLQGWFRNTALSQLYQVQERSEALTQLQQQIQETAEDAVTKLFLVGITPYIMGLVGLGLIVFLLFQRVRWGKEALLARYGDTPWPTPWDGYTILEVLVVGFFLVGQFVAPLLVSAILQFFHLGNDVRSQAIRVFSSYLLVAFAAIAILWNAIRSYFPLESDWFRFRFRSNWILWGVGGYCVAIPVVLIISLLNQQLWQGKGGSNPLLQLVLEGKDTLALSLFFSTAAIAAPLFEELLFRGFLLPSLTRYMSVWGAIGLSSLIFAAAHLSISELLPLFSLGMILGIVYTRSRNLLAPMLVHALWNTGTMLTLLVLGSE
>NZ_AP018254.1|WP_157780650.1|1225291_1225429_-|hypothetical-protein
MSNILNRVLCTSVEKASRLFCAEVARTPVLFSACYTNNARGSENR
>NZ_AP018254.1|WP_096620723.1|1225680_1226244_+|Uma2-family-endonuclease
MVVTKSQILTLEEFLQLPETKPASEYIDGKIIPKPMPQGKHSLLQGELVPAINLIVKPQRIARAFVELRCTFAGRSIVPDIAVFTWSKIPRDANGEVANAFTAAPDWILEILSPDQSATKMIKNILHCLNHGTQMGWLIDPDEQTVIIYLPQQQPEIFDQKEQILPVPDFANGLNLSVEALFGWLLE
>NZ_AP018254.1|WP_096620724.1|1226235_1227153_-|alpha/beta-hydrolase
MAVNQHQHHQTLTYKWQNYQCTYDYHPANPQANQDIPLVLIHPIGVGLSRLFWRRFSQQWQIQNKFNSIYAPDLLGCGDSDMPNIAYTPNFHAEQLNFFLTTVINQPVILVVQGALFPVAIELVTMHPQLIKGMVLSGPPAWNIISKPRPKWRQKLTWSFLSSILGNLFYRYARTEKFLRSFSTRQLFASSQDIDEEWLMMLRLGSVDMASRFAVFSFLAGFWRKDYSTAIANLNIPTFVVFGETASSVSKEGKIESADDRLSQYLTHLPTAQGVKIPGRNVLPYESAPEFVNAIAPFIDQPTLL
>NZ_AP018254.1|WP_096620725.1|1228404_1230828_+|endonuclease-MutS2
MIQSETLELLEWSRLCQHLSNFAATKLGVFAARNIQIPTTLTASEQLLKQTQQVYDLEGRTPTGLSFEGIQDIGDSLERAELKGLLAGDELLAIATTLAGARNLRRTIENHEDLDVLLALVADLRTYPEVEQEIHRCIDERGHVADRASSKLAEVRSEIRRVRSQINQKLQNIIQVKSNALQEGIITQRGDRYVLPVKASHKDVIPGIVHDTSTSGVTLYVEPNSVVPMGNQLRQLLRREEVEEEAIRRALTGQIADIIPDLERLLAIITVLDLACARSRYSQWLKGNPPRFVDPTQEQITLRQLHHPLLLWQQQYEQGHPVVPVDLRIEPHIRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFEQVLADIGDEQSLQQSLSTFSGHIRRISRILTAISPGESPEDQDLKSPSPSLILLDEVGAGTDPVEGSALAIALLRYLADHALLTMATTHFGELKALKYEDLRFENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVIAAAKQQMGGVTDDVNLVIAGLEDQRRRQEIKAAEAQNLLQQAEKLYKEVSAKADALQEREQALKASQEAAVQEAIAQAKKEIAQVIRRLQQGTPTGQDAQNATNAINQIAEKFIPQAPPKPKPGYIPKIGERIRIPKLGQTAEVLTAPDADREINVRFGIMKMTVKLDDIESLDGQKPEPSGKETKVKENKTKTESPPAATEPLIRTSRNTIDLRGKRVADAEYILDQAIAQAHRAIWIIHGHGTGKLRQGVHEYLRQHPRVSKYEPAEQADGGTGVTIAYIVD
>NZ_AP018254.1|WP_096620726.1|1232497_1235281_-|DUF11-domain-containing-protein
MKKQLIQTPILLFTTLTSQILPLYLHPPSSPTLAQTTATSCANPGRDTTPLNGIINTYYPGTNNISPGIPNTTINLGTRRGANIDIQAGDLLVIMQMQGTNAGNYEYAVAEQFNGTSVIVRGTGTNGGLNNSYINAPATPTQGQQSFQVIRVPQYLDANLTGIVTAAPWDGTTGGVVVADVARELNFTGSINVSGQGFRGGRGLRLGGRVDWRTNPPTPIDPLPPGVEADYTGVHAPSPTIANINAGVGASGLNGIGANGSKGEGIGGTPRYTFNGDLTAPLPVVEPPEGYPGGSFGRGAVGNAGGGATDGDPFGTNLATIAISRGYNAENSGGGGGGNAGVGGQGGFSWRSKEDVGGRGGNGFTATSSRVILGGGGGAGSNNDGATASNGIASSGATGGGIVLIRAGNIIGNGTVNATGANAPNSRLETTTLNVNDGGGGGGAGGSVVISAVNSTGSNLNINVQGGEGGDVRTRVPHGPGGGGGGGVVLTRNVGQTVNLQGGISGTFINTGDDASETPDIIGDQGTYGATNGSDGVAGNISSITGILSGAECLDAPEPPPQPLIYKSVRLLNDNDNSGNITVGDDLQYTLTIINPSTTLPVNGMAIADRVPGQLQVIRNSILFPTGFTAASSLPNGNFNGTNQYIPFTNPGDLPINTTLTLTYTARILPDATGQIANQAGIDLTPTDPNPIPEILSDASDSLNPTQPGSGNNPGNVIDRNGNINQITGNGVTPDITIVNIQTLPPEPPPPGIVNLYGVKRITNVRRNGVPITEVNFNTFVDDPNDVNDNRGGWSQFLPIGVPTIGNEYPLQSGDEVEYTIYYLVEGNQPINNARFCDPIPVGTTFIPNSFASGRGIGVNMANNMTNPTNVADADNASFLSPVAPLPPGNVCPNQTNPTGTVIVNLGNLDHNQGNNFGFVRFWVRVD
>NZ_AP018254.1|WP_096620727.1|1235686_1240213_-|hypothetical-protein
MKSHKLVDKKLITICTTLPVVSTTSVLAETTGANNIQNPHSLNLVEGELNTGINSISRDKGADLKVSLTNSYPEEGEFRDKVELGGFDNNIKTSVKSISAYFPAKFQQQNLQSGKYPEGKSEDNHKTDLQRHDLKAENKNHQQVNNRIHNPTSKSPNSLISPPELNYPELPQTLSSFPGKTENYQVTLEHKLQQKAEITSDSQSVPLIVNTNQHQELENTPENTTQFTATVDQKNKSIINATNGVIPSSFVDTSITVSDNISQKVVNTKNNTPSHPVNQSTSTIISSNPLNTNNTDISQSITLSPAKTISPQAVNTNNAKNNDISPHPVNSPLSISPPIAEKISPSQQSFLKTNSDYFPDHTASLSTLTNNNPIKTNTAKIHHDQQDKTEELLILTPLSGETTQKTTNLAIQYPSHLQATVTINGKSIDPQLPNHLQTDSIQKLNTQIWYNLPLQIGENTITATLDNGKTSTVKITRQYQQTLILLTPLDEPRIPADGRSTVKIKGQITNTSHEIIREHIPVTLTTTAGKFIGVDNDADAPGFQVIARNGEFTVELQASLEPQNVNVRAAIDNWQQQNIFDTVPQDYTNIEFITNLRPSLATGSINLRIGGGGTNYHGRFRDFLNPRKIGRTDVDLDAAVFATGKIGDWLFTGAYNSDRNLNEDCLGDTRLFGSGQVCERVYPVYGDAGTVTATTPSIDSVYVKLERTPKIPGAESDYFLWGDYHTQEFARPSQLFSGITRQLHGFKGNYNLGNLQVTALFANNIEGFVRDTIAANGTSGYYFLRSRNLVPGSENVFIESEEINRPGTVVKRQSLSRGADYEIDYERGTIMFRSRIFATELNPLGNTLTNRIIIIYQNRGGNGSKLYGGRLQYNFRQQTPHHNIPPRNYKTDTPFLATSYLWEDKNAANWQLLSVDAHIPWGKTGQIIGEYAYSHHNSLALGNMQGSAYRLEATGKITPDLQAKAFYRSVSENFANNATWSFVPGQTRYGASLAGKLSSTTSFHLGYDHEDNFGIAPALRTNSFDLFNPQPQPLPGTKVDNSLTTLRAGIEQKIGDGNIGVEYVNRQRQDRIDNRFHGNASQIRSYGSIPVTASLTFRAQNELNLGQSDALYPNRTTLGLDWNLYPGVTVRLAHQLFAGGLLKGNSITSLDTLFSHQFNQDTSVTGRYSIFSGIDGMNDQAAIGLNHRIRLAPGLKLNLGYERIQNHILGNTAAGIRFAQPYATGQTGFTLGNLSGNSYSIGLDYTDNPNFQANARVEYRDGEGGNNLVISAAAAGKLSTALTAAIRYQQAAGANQLLGDLPNTANLRFGLAYRDPRNDKFNALLGYEYRLNPTTTPETLLTGNGNSSTEHVFAAEAIYAPHWQWEFYGKYAFRNHTSYLADNFTNTSTAHIAQLRATYQLGYRTDVAVEGRWFGQPSVGFNEFAIALESGYYLTPDLRIGVGYAFGSADDRDFTGYRSAGGPYLNITYKINELFAGFGRQKPAPKQQQESEIVVQKTGDRRQDTGGD
>NZ_AP018254.1|WP_096620728.1|1243796_1245611_-|penicillin-binding-protein-2
MKQKYRSRRNWQVPSRVKERLGQQPESHLRGKTGASSQSNNPVIKSRLFMAWGVLIVSGLGLILNLYRLQIVDGATLAQRARNQQMLTLRPYMPRRSIIDRNGNFLAIDQPVYTLYAHPNLFKKSFAEVATALAPILNQEVSDLEQKFQRQKSGIILHQRLSEEDRNRIVQLRLDGLDLRQKYARFYPQDELVAETLGFVNANRKGQAGIEQTQERLLERKLKTLRLNRTRQGVLMPDYAPEGFIDFDDFKLQLTIDSRLQRVARNALKEQIQRYRAKRGAVIVMDAYDGGLLAMVNHPTFNPNEFSKADMSLLKNWTVTDLYEPGSTFKPLNVAIALENGVIQPHDTFVDNGSYQVYDRWIKNAGNKRYGRINIAQILEHSSNIGMVQIIQKMRPHAYYGWLERLGLGQAVQTDLFGSISSRLKPQDEFASTPIEPATASFGQGFSLTPLQLVQMIGALANGGKLVSPHTVKGLVDSEGKIHDAPSFAAPRQIFSPMTTQRVVEMMETVVAGGTGKNARIPGYRIAGKTGTAEKASQSGGYSSARITSFVSILPAQQPRYVVLAIVDEPKGKDAYGGTVAAPISKKVMEALITIEKIPPSLKQ
>NZ_AP018254.1|WP_096620729.1|1245617_1246286_-|hypothetical-protein
MAVTRKSGNNSPNPYISKSGWPGSKPVRRRAPLHVNQINSTANPGQAVVKPELPLSSRQPAPSKKRVPTSSPSPRARANSPEKTAKIQQKIPLMPTLEEVPFWLKKIQQIQRYSSLMTFGLVSATLAVYALNVYSQQSWGMAYQELQRLQKHEQQLTTKNEVLKNQIIREAEKPSTGMVTPTPATAIFIPSAVSGTSSGNNFNQPTEEQPHNFRNQTTPMGY
>NZ_AP018254.1|WP_096620730.1|1247742_1248186_+|tellurite-resistance-TerB-family-protein
MSLFDNILGNNTVENKLTATEAFAAITLVAVACDGYLSDKEAESVCFALSKIHLFQGYSRERINALLEKLLEVLRNNGLNALFNAAKASLSEEMRESAFAIAVDLVLMDGKVTSEEHEFLNDLCQALGIKREMAMQIVQVMMIKHRS
>NZ_AP018254.1|WP_096620731.1|1248292_1249834_+|AAA-family-ATPase
MTDTALPPVIHKMLQADFYPHPVEEPIQLVQTHCSYVLLTGEFVYKVKKPVDFGFLNYSTLAKRKFYCYEELRLNQRGAAELYLEVVAITTSNGDYVLGGEGEAVEYALKMRQFPADGLLSTRFENGTITAGEIEELGRVVANYHRHTETNDYIRSFGTVEKVRESIDQNYEQTEVYIGKAQTLSQFEQTKAYTDNFFATKVELFNQRCANNFIRECHGDLHMGNICCWQGQILLFDCIEFNEPFRFVDVMYDVAFAVMDLQARHRPDLANIFLNTYLEQTGDWEGLQVLPLYLSRQAYVRAKVTSFLLDDSAISPAAKQQAAATAAAYYRQAWEYTQTHQGKIFLMSGVSGSGKSTTAKYISQHSGAILIRSDAVRKHLAGIGLLERGGEEIYTPEMTAKTYGRLSELGILLAQQGWTVILDAKFDRVELRQNVLKPAINAQIPVQIIECVAPESVLRSRLEARTGDIADATADLLTSQLAAAEPFTEEEKNYVKTLDTTSAIAPQLLDWGF

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Crispr_ID: NZ_AP018254_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_11

1288518-1290511

TypeIII

Consensus_repeat	Method
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CRISPRCasFinder
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	PILER-CR

26 spacers

cas2,cas1,csx18,WYL,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7

The CRISPR arrays of NZ_AP018254_11

>merge|NZ_AP018254|11|1288518-1290511|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCAGATTAAGCGTGTCAGAATAGTTAAGCGTGCTGATGGTTATTATTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTGAGACACAGTGAACGACACCACAGACACTGTGCTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTATGCTATCACGCCAGCCTCGGAAGCCAGCAATACAGCGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCAGGTAAATTGTTTTGTTTACTACAGTATGCTCCAAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACAATAAGCTTTACCCGCCTAAGTGTATGGCGGACAACGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACGTGACTCCAGTTTGGCGGGACTGGAAGTAACCTCATGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCCCAAGGCAGCGTCCATCCACTTGCGCTGCACCAGGCGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTGGGCTATGTATGCACAAGAGGGTGATTCGTTGAGGGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACACTAATCCCGTGTAGGAAGAGGTTTTAAGGTCGATAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTTGAGCAGCTCCTCGACCAGCACCAGGTCGAACCGGTCGGCGGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTGGCGGTAAGGAATATTATCACCACCAGTCAGGCACAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACGAGAAAACTCCCTGCACTGGAGAGCCTCTTTCACTAATTCAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCCAAGTCCCACACCAACCCCAACACCCACACCAACCCCAAGTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACACAAAAGTTCGGCAGCATAATCTCTACTGCCGTACCCCAGGGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACGGAATGCGATCGCAATGTGGGAATGAGATGGATGCGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTTTAGTTCCATATCTCCTCGCTTCTTTCCTCTTGTTTTTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTTTAATGCTTTTCATCTAGACCTTGTCCAGTGCCCCCGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTCAACACTTCACTTCCGGATCAATAGAGCCTGCCGAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTTTATGTCATTTGTAAGCCATGCTTTGACTATTTCTAAAATTTCAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACGTGGTGCAGCTTTAAGTGAAGGTGGTAAGCCTATTATTGCTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTAATTTCTTGGGGGATTCCATTCTTTTCTCCCAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACACTATTGAAGGGTTGGTACATCAATTAGCAAAGTTCCCTGAAGCTGGTATGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACACGGAATACGCTACTTTCTTTTGTCTTAACCAGCCCTTAACGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACAAACCCAACAACTCCTTGGCTTTGTCTATTATCTGATAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACATGAAATGCAATTCTTCATCTTATTCCCAAGAAAATGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTGTTGACGTCGATGATCTGGGCGCCGTTCTCGACCTGCTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA

>NZ_AP018254|11|4|1288518-1290055|PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGATTAAGCGTGTCAGAATAGTTAAGCGTGCTGATGGTTATTATT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGAGACACAGTGAACGACACCACAGACACTGTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TATGCTATCACGCCAGCCTCGGAAGCCAGCAATACAGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGGTAAATTGTTTTGTTTACTACAGTATGCTCCAAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AATAAGCTTTACCCGCCTAAGTGTATGGCGGACAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGACTCCAGTTTGGCGGGACTGGAAGTAACCTCAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCAAGGCAGCGTCCATCCACTTGCGCTGCACCAGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGGGCTATGTATGCACAAGAGGGTGATTCGTTGAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACTAATCCCGTGTAGGAAGAGGTTTTAAGGTCGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGAGCAGCTCCTCGACCAGCACCAGGTCGAACCGGTCGGCGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGGCGGTAAGGAATATTATCACCACCAGTCAGGCACAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GAGAAAACTCCCTGCACTGGAGAGCCTCTTTCACTAATTCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCAAGTCCCACACCAACCCCAACACCCACACCAACCCCAAGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACAAAAGTTCGGCAGCATAATCTCTACTGCCGTACCCCAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GGAATGCGATCGCAATGTGGGAATGAGATGGATGCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAGTTCCATATCTCCTCGCTTCTTTCCTCTTGTTTTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAATGCTTTTCATCTAGACCTTGTCCAGTGCCCCC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TCAACACTTCACTTCCGGATCAATAGAGCCTGCCGA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTATGTCATTTGTAAGCCATGCTTTGACTATTTCTAAAATTTCA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGGTGCAGCTTTAAGTGAAGGTGGTAAGCCTATTATTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTAATTTCTTGGGGGATTCCATTCTTTTCTCCCAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	CTATTGAAGGGTTGGTACATCAATTAGCAAAGTTCCCTGAAGCTGGTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	CGGAATACGCTACTTTCTTTTGTCTTAACCAGCCCTTAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	AACCCAACAACTCCTTGGCTTTGTCTATTATCTGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	TGAAATGCAATTCTTCATCTTATTCCCAAGAAAAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACT	GTTGACGTCGATGATCTGGGCGCCGTTCTCGACCTGCT


>NZ_AP018254|11|11|1288518-1290510|CRISPRCasFinder
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGATTAAGCGTGTCAGAATAGTTAAGCGTGCTGATGGTTATTATT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGAGACACAGTGAACGACACCACAGACACTGTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TATGCTATCACGCCAGCCTCGGAAGCCAGCAATACAGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGGTAAATTGTTTTGTTTACTACAGTATGCTCCAAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AATAAGCTTTACCCGCCTAAGTGTATGGCGGACAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGACTCCAGTTTGGCGGGACTGGAAGTAACCTCAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCAAGGCAGCGTCCATCCACTTGCGCTGCACCAGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGGGCTATGTATGCACAAGAGGGTGATTCGTTGAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACTAATCCCGTGTAGGAAGAGGTTTTAAGGTCGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGAGCAGCTCCTCGACCAGCACCAGGTCGAACCGGTCGGCGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGGCGGTAAGGAATATTATCACCACCAGTCAGGCACAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GAGAAAACTCCCTGCACTGGAGAGCCTCTTTCACTAATTCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCAAGTCCCACACCAACCCCAACACCCACACCAACCCCAAGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACAAAAGTTCGGCAGCATAATCTCTACTGCCGTACCCCAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GGAATGCGATCGCAATGTGGGAATGAGATGGATGCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAGTTCCATATCTCCTCGCTTCTTTCCTCTTGTTTTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAATGCTTTTCATCTAGACCTTGTCCAGTGCCCCC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TCAACACTTCACTTCCGGATCAATAGAGCCTGCCGA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTATGTCATTTGTAAGCCATGCTTTGACTATTTCTAAAATTTCA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGGTGCAGCTTTAAGTGAAGGTGGTAAGCCTATTATTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTAATTTCTTGGGGGATTCCATTCTTTTCTCCCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACTATTGAAGGGTTGGTACATCAATTAGCAAAGTTCCCTGAAGCTGGTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACGGAATACGCTACTTTCTTTTGTCTTAACCAGCCCTTAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AAACCCAACAACTCCTTGGCTTTGTCTATTATCTGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATGAAATGCAATTCTTCATCTTATTCCCAAGAAAAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGTTGACGTCGATGATCTGGGCGCCGTTCTCGACCTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|11|4|1288518-1290510|CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGATTAAGCGTGTCAGAATAGTTAAGCGTGCTGATGGTTATTATT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGAGACACAGTGAACGACACCACAGACACTGTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TATGCTATCACGCCAGCCTCGGAAGCCAGCAATACAGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGGTAAATTGTTTTGTTTACTACAGTATGCTCCAAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AATAAGCTTTACCCGCCTAAGTGTATGGCGGACAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGACTCCAGTTTGGCGGGACTGGAAGTAACCTCAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCAAGGCAGCGTCCATCCACTTGCGCTGCACCAGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGGGCTATGTATGCACAAGAGGGTGATTCGTTGAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACTAATCCCGTGTAGGAAGAGGTTTTAAGGTCGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGAGCAGCTCCTCGACCAGCACCAGGTCGAACCGGTCGGCGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGGCGGTAAGGAATATTATCACCACCAGTCAGGCACAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GAGAAAACTCCCTGCACTGGAGAGCCTCTTTCACTAATTCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCAAGTCCCACACCAACCCCAACACCCACACCAACCCCAAGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACAAAAGTTCGGCAGCATAATCTCTACTGCCGTACCCCAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GGAATGCGATCGCAATGTGGGAATGAGATGGATGCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAGTTCCATATCTCCTCGCTTCTTTCCTCTTGTTTTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAATGCTTTTCATCTAGACCTTGTCCAGTGCCCCC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TCAACACTTCACTTCCGGATCAATAGAGCCTGCCGA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTATGTCATTTGTAAGCCATGCTTTGACTATTTCTAAAATTTCA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGGTGCAGCTTTAAGTGAAGGTGGTAAGCCTATTATTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTAATTTCTTGGGGGATTCCATTCTTTTCTCCCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACTATTGAAGGGTTGGTACATCAATTAGCAAAGTTCCCTGAAGCTGGTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACGGAATACGCTACTTTCTTTTGTCTTAACCAGCCCTTAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AAACCCAACAACTCCTTGGCTTTGTCTATTATCTGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATGAAATGCAATTCTTCATCTTATTCCCAAGAAAAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGTTGACGTCGATGATCTGGGCGCCGTTCTCGACCTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|11|5|1290091-1290511|PILER-CR
	CAGATTAAGCGTGTCAGAATAGTTAAGCGTGCTGATGGTTATTATT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGAGACACAGTGAACGACACCACAGACACTGTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TATGCTATCACGCCAGCCTCGGAAGCCAGCAATACAGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CAGGTAAATTGTTTTGTTTACTACAGTATGCTCCAAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AATAAGCTTTACCCGCCTAAGTGTATGGCGGACAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGACTCCAGTTTGGCGGGACTGGAAGTAACCTCAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCAAGGCAGCGTCCATCCACTTGCGCTGCACCAGGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTGGGCTATGTATGCACAAGAGGGTGATTCGTTGAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACTAATCCCGTGTAGGAAGAGGTTTTAAGGTCGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGAGCAGCTCCTCGACCAGCACCAGGTCGAACCGGTCGGCGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGGCGGTAAGGAATATTATCACCACCAGTCAGGCACAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GAGAAAACTCCCTGCACTGGAGAGCCTCTTTCACTAATTCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCAAGTCCCACACCAACCCCAACACCCACACCAACCCCAAGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ACAAAAGTTCGGCAGCATAATCTCTACTGCCGTACCCCAGGG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GGAATGCGATCGCAATGTGGGAATGAGATGGATGCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAGTTCCATATCTCCTCGCTTCTTTCCTCTTGTTTTT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTAATGCTTTTCATCTAGACCTTGTCCAGTGCCCCC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TCAACACTTCACTTCCGGATCAATAGAGCCTGCCGA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTATGTCATTTGTAAGCCATGCTTTGACTATTTCTAAAATTTCA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GTGGTGCAGCTTTAAGTGAAGGTGGTAAGCCTATTATTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTAATTTCTTGGGGGATTCCATTCTTTTCTCCCAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	CTATTGAAGGGTTGGTACATCAATTAGCAAAGTTCCCTGAAGCTGGTAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	CGGAATACGCTACTTTCTTTTGTCTTAACCAGCCCTTAAC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	AACCCAACAACTCCTTGGCTTTGTCTATTATCTGATA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA	TGAAATGCAATTCTTCATCTTATTCCCAAGAAAAT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACT	GTTGACGTCGATGATCTGGGCGCCGTTCTCGACCTGCT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620761.1\|1288051_1288333_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP018254.1\|WP_096620760.1\|1287059_1288052_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP018254.1\|WP_096620753.1\|1274946_1275609_-\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_AP018254.1\|WP_096620765.1\|1295304_1296402_+\|CRISPR-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_AP018254.1\|WP_157780654.1\|1302529_1302685_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620762.1\|1290768_1291659_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620759.1\|1286566_1286821_+\|hypothetical-protein	csx18	cls000006_csx18_CAS-I:CAS-III	unknown
NZ_AP018254.1\|WP_096620767.1\|1297848_1299801_+\|hypothetical-protein	csm3gr7	pfam03787_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187792
NZ_AP018254.1\|WP_096620763.1\|1291844_1292147_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620756.1\|1281658_1283617_-\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NZ_AP018254.1\|WP_096620768.1\|1299959_1301525_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620754.1\|1275861_1280649_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620764.1\|1292240_1295318_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|378863
NZ_AP018254.1\|WP_096620769.1\|1301638_1302208_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096620758.1\|1285107_1286256_-\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP018254.1\|WP_096620755.1\|1281274_1281511_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_AP018254.1\|WP_096620757.1\|1284755_1285046_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224583
NZ_AP018254.1\|WP_096620752.1\|1273746_1274820_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|227132
NZ_AP018254.1\|WP_172892753.1\|1297453_1297852_+\|hypothetical-protein	cmr5gr11	cls000022_cmr5gr11_CAS-III-B	unknown
NZ_AP018254.1\|WP_096620766.1\|1296535_1297411_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620761.1\|1288051_1288333_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.59633e-33
NZ_AP018254.1\|WP_096620760.1\|1287059_1288052_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.77783e-104
NZ_AP018254.1\|WP_096620753.1\|1274946_1275609_-\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	5.65497e-08
NZ_AP018254.1\|WP_096620765.1\|1295304_1296402_+\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	7.26524e-68
NZ_AP018254.1\|WP_096620757.1\|1284755_1285046_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.37557e-18
NZ_AP018254.1\|WP_096620767.1\|1297848_1299801_+\|hypothetical-protein	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	7.3896e-15
NZ_AP018254.1\|WP_096620756.1\|1281658_1283617_-\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_AP018254.1\|WP_096620764.1\|1292240_1295318_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|378863	pfam12469, DUF3692, CRISPR-associated protein. This domain family is found in bacteria and archaea, and is typically between 101 and 138 amino acids in length. The proteins in this family are frequently annotated as CRISPR-associated proteins however there is little accompanying literature to confirm this.	3.50571e-41
NZ_AP018254.1\|WP_096620758.1\|1285107_1286256_-\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	3.95578e-14
NZ_AP018254.1\|WP_096620755.1\|1281274_1281511_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	8.95784e-29
NZ_AP018254.1\|WP_096620752.1\|1273746_1274820_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|227132	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion].	1.49508e-06
NZ_AP018254.1\|WP_096620769.1\|1301638_1302208_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	9.39078e-27
NZ_AP018254.1\|WP_096620766.1\|1296535_1297411_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	2.07622e-33

>NZ_AP018254.1|WP_096620761.1|1288051_1288333_+|CRISPR-associated-endonuclease-Cas2
MLLYIVAYDIPCDKRRKKISDLLEGYGQRVQYSVFECQLTHSKFKELCQRLRKVVKLEEDSLRFYPLSQHTLGQVEVWGVSPPVTSFPSSVII
>NZ_AP018254.1|WP_096620760.1|1287059_1288052_+|CRISPR-associated-endonuclease-Cas1
MLTLYVSQQNCYVGLNQESLIIKQGENILGEVQLPLLEQVLIFGKSQVSTQAIRACLWRDIPIAYLSRMGYCYGRILPIARGFRQLSRYQQQLLLTDNLITARAIVQAKLKNSRILLRRQRKRLESTNIEAVLQSLDYLATQAGTAETREKLMGIEGAGAAQYFSVLGECLTNSDFIFTARTRRPPGNPVNAILSFGYQVLWNHLLALIELQGLDPYYASLHIAHDGHAALASDLIEEFRAPIVDSLLLWLVNSRVIDAQNDFEYRDGGCFLNDTGRKKYLQAFSQRMEEQIQDDNGEKQPRWDLLTRQVKAYKQFVYNPSYQYQPYQIR
>NZ_AP018254.1|WP_096620759.1|1286566_1286821_+|hypothetical-protein
MYISPRAAFIRNTLVSLGTGIITLVILLIAPLGLAAVIINTLLVTAATFTISTIADRVILWLEPGQQAELLGDSHRGKINKRRD
>NZ_AP018254.1|WP_096620758.1|1285107_1286256_-|WYL-domain-containing-protein
MEITCERLLLLIATFLKYPGVGCPDSFESRGKKHHDAIAQVQKRFRELAHSLNIDLPPGYPAIPTLRKDLNILRKYGILNQRMYRWGYYLGTGVMTIEELKVALNALLSQAKFQGHPQVRLIYESLEKRLRGWDGELKGELFYPVRQHLNRAIVYTDPEEMIAKGKNKDNLYHQINLVEKAISQGQAIAISRQSSPYNHKHLGMMEVYPLQLIYHDIAWYLLYEYCDNGHFAIGRVNRFANYCQLLDTIRGIAIQQEKLKQAYRLIENGWGLKLGDVEEQSLELAGELPLTSIKVRFYPPVATFILEGDRRHPSQKISNVVKDKSTGEILSVDYTVTLPRRSFDEFLLWLHRYMDAAQIITPSELAQKHLQTAQRLIQRYSN
>NZ_AP018254.1|WP_096620757.1|1284755_1285046_-|nucleotidyltransferase-domain-containing-protein
MKKDEVLKVIALHREELKKMGVKSLNLFGSVARDEAKTDSDVDFLVEFDSEIGLFEFIKVRLFLEDILDCSVNIGTIDALREHMREVVTKDLIHAL
>NZ_AP018254.1|WP_096620756.1|1281658_1283617_-|molecular-chaperone-HtpG
MLEQGNITIHTENIFPIIKKSLYSDHQIFFRELVSNAVDAIQKLSMVSRAGEYKGEIGEPEIEIIIDKNNKTLAISDNGIGMTAEEIKKYINQVAFSSAEEFISKYKGSSDQPIIGHFGLGFYSSFMVASQVEIDTLSYQEGSQPVHWVCDGSPAFTISDSTRRSTRGTTITLHLMEEELEYLESERIKNLVKTYCDFMPVPIKLNGEVLNRQKAPWRESPNNLTKEDYLEFYRYLYPFQEEPLLWVHLNTDYPFIINGILYFPKLRPDVDVTKGQIKLFCNQVFVSDNVEEIMPQFLLPMRGVVDSTDIPLNVSRSSLQGDRTVKKIGDYIAKKVGDRLKELYRDNREEYINAWKDLGTFVKFGVLNDDKFKKQVEDAIIFRTTYQPNPDTANVQIPNEDGDAWQDVNPGAKLPYTTLKEYLERNKERHENKVFYCTDEAAQATYIELHKSQGLEVLYMDSFIDTHFINFLEQEYKDVKFTRVDSDLDNTLLDKEKASEIVDPTTNKTRSQVIKEIFEKALNKPRVNIRTEAIKSDNPQGTPPAMVLLPEILRRLRDMNAVMQQKMAEFPDDHILVVNTAHPLIQNLATLNQGTIIQGSGESPNGQLVNMICQHVYDLALMTQKGFDADGMKSFVERSNEVLTKLTEQAAK
>NZ_AP018254.1|WP_096620755.1|1281274_1281511_-|50S-ribosomal-protein-L28
MSRRCQLTGKKANNGFSISHSHRRTKRLQHANLQVKRVWWAEGNRFVKLKLSTKAIKTLEKKGLSTMAKEAGLDLNKF
>NZ_AP018254.1|WP_096620754.1|1275861_1280649_-|hypothetical-protein
MSRNRRLFKKIPRTYRKLFRAIASAIHKQKIWLLRTLWVTKSPRKSANSGFVLPTVAMVSLVVVLLTVAILFRSFERSNNASNVRVNEAALSSAMPAIDRARAKIDKLFEDPRLPRSTPSDLALYNALAKGINKYTFGDETQLQIRFDVNENKKIDQPGSDTDLAKTEIIDTAWRYPVDTDNNGKFDSYTLYGIYFRSPGRDDKTGKLDRARNPLEARTPPMDDGSLGGICKSARGTAATLIGESGWYKSGTTLKKSFFVYVTTVPITENPSDPKFEQYKAGSKGFSAIEYQQDQERVPIPNNAVVYEDDLEVSPGGGLQINGRIFTNSNFQTTQQFNNDHVRFYQVSSPQSCFYEAENSKIIVGGNVGFGRITGTSRTGNVPIHLYKRDGVTIGTAHVISNANKSVNNTAGDIAYNTRAFAERLNKLVAVQMGTNRSDYSKDPIDVREAIQTRIQDNPGLNVEEVRQEELENYFKKRIIRVPFRRVSINQDGSADFAGLQDVGTDKLRAQDSWIYPFDANTGLTINPDKLPAIEPKKLQDVHKGDEQFVGDRVLVGNNLPALWFDKSLKDFVGRKATQLVKAGIKWDFTKENLDKSDEDRTRSTRIQDILSLSGATERDGFFEQKATETPKNKLDNVGGMRVVTGAGIFVDGSQSEGAFYPWDSSTDLDKSTPGNQNGSFFQPRPSLDTNFVGNEANKVKPDSLKFKNLDPIVVWPDTMPMTGGANVARDMKGDLLMRATAVYHYKLDDGIDQRPIACISSYYDPTDATTANNAPGLPSKAQSAKEFPYPAAPGGKSNNGVVYPPYSGTRAAAISKYSRQLERQARLVYPDGRFVNEPLRMALSKPANSKLSMSESSAIDTAVCAIEILNGQLTPNSSIIPHGAIYEQAFLDARQVKSVEQTTNVATLGKNPQYNRAIEERQPLEVRVTVLDMDELRKKTIGDNSEYLLPNSGIIYATRDDALLDLSDTPDRQTGEKTDAAVTARRKLISPTDYKLDPTRRPNGIMLVNGSRLDRQTNYRDEEKGLILATNVPAYIKGDFNLHIKGGDKSKPVEEFGEKLRQDDGSINWGKFYQRGQGKPNNDLDFDFACRPKDPRLPDCRTGDTWRPATVLADAVTVLSDNFRFGFRNEGDYDLRNNEGDIKSAEYRNQGFFDNNYVTSSDWYRTTGNIVVPRDFDGNPNNGNEQGSSYLNNFVTPIQRRVRFGEYLMEICTKIPVSSCTAEDWSLDGAGLKPTPENVVGKNYRLDTFRAGTTVELAKVDLQRYARRVAFLRNIDGNLILDNGQPVPLGIDGTNGTKIINAYTRNQQTTLGFATFGVPPATENAALWFRTTDKLDGLPGNNTKYAPQYHLYYMTKDGRPLTGTDPNEHPLLVPVLQLHVPQPELPGNLDRPFRELLGNNSRDDGRVNWFQNGYTTTTNVIIAGGDTPSRPTEFNGGLENFVRYLERWGKPDNGRLVPQNHSLAGSLIQYKRSQYATAPWEAILNDNSSIFGQDYSSGRSSGGYPLDLNRGRTSFYTPPSRQWGFDVGILSQLPDLFAQTFTLPPTTEPNEFFREVNRDDPWVKTLLCAKTADGKNNAISADQRPTEYCREKTE
>NZ_AP018254.1|WP_096620753.1|1274946_1275609_-|type-II-secretion-system-protein
MHCTDSKTWIKKLKLFACATQADNNPSGFTIIESLMAIIVVAILMTAIAPVIVLSTATRIQARRIEVATQAAKSYINGVNSGNIPLPDVVTTTFDQVPAPTKLENLYCFDVDGGVCGKNPEGQDSNQDLRIQAFRTPGDRKSGFQMGLRVYRNDALKSGNPLKASTADKRVTQKVFTGGLGDVTAPLIELTTDISAANTSFTDFCSRLKNSANTSSECNR
>NZ_AP018254.1|WP_096620752.1|1273746_1274820_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKKILGLYIYYRLKLKSQEKKSKNSGFTLLELLVAMIIAVLVIIPLLGFMLDILNTDRREQVKLITQQEIQLAIDFIGRDLQESVYIYDAKGIQAIRNQLPYSTNNDRVPVLVFWKRQFQENIIPFKTSKSSRKQDDAFVYSLVVYYLIQNNANNNSNNIWSDQFRIARFEIKDGIRDLDQPFKADGRPNYMKDKDGNELVPDKGFQRYDLSGSGTLEIKMNNWKKDPNVNYDLRANSPNVLIDYIDKSKNNSLNPVDCTTVFPVDRLPADKQEERKQAQLVPASNGNFAYPGLNAALANSSFYACVDIDNTSAKVFLRGNAYARLDPQNNAYSDNNRAYFPMVSLQVQGRGVIGIK
>NZ_AP018254.1|WP_096620762.1|1290768_1291659_+|hypothetical-protein
MFKKAPTAILSLGLTVILYGVLPTQAETFSTNPQNPTVLKSNTISGQILPTKGKKYYVTFLAGSGNIFFDVNIAPKDNKGAVFFWQVYRNATDAVKDNPLCTGNLYLEVEKKGDKCVITTPDKKPQAVLLSFGAYPNSDPVMLNYTIKLSGDWQALSDSATSAVDLSMRRAVYFATGYTKSVNTSTPYATPGQPITLNRANNKRCGKASCVYWAGVFIFRNSTAGNLKVPVKITSGGSSQTATVEFTDGSKIAELTKGITINNGTNKVVVEIDPDNKLGEANRQNNTLTVDVTLKP
>NZ_AP018254.1|WP_096620763.1|1291844_1292147_-|hypothetical-protein
MAEYPTDWTFGLFMSYSGIFSFLLTDGNGYAVPTVNNRDRIFLVVCSMGFEGFVVVALSRKNFNIKALKYTHAFPHPSKLIWWSTSDRMFPVSSKLSSID
>NZ_AP018254.1|WP_096620764.1|1292240_1295318_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MVNASSKAKVFWQSKIWGILHDPILKALHDNTGRGGNSFWQRLDVMQDWVENNWNPEDSQGKLLKRMKLADYIASASDRGAIGSIASSVNYDNNGLEIKHLLSGATLNFRVSEHNRLISSRLQYLTQKEDQLVDLIPPAIRNDEEQVFWWLWRCLPEKVFELFNHDDTLMLMPAETRLPDSSIWSHASITAALAGALTGYDATSDDLERWQPGKEVSHPYVVSFTFTPVQELIKASRKMRDFWAGSWILHYIAAKICFELALKYGPDSFLYPSLFQQPLIDLWLTQKYPDLGVTKPNFHDLLTAGFPNVIVMILPKDKVEAAMQMAEQTLKETWQELGDLVFDELQKNRRWMRGLRKESKVWDGWLQAQWQFYWAGVPLGKEGEELKNAAILEVDKDKFEPWVNAQNQAFKANLYKPAELKFLRQAYQQRLERYGRKFSVNVGSWWSSIFDQTRSALNAVKNARNWVIPTVFAPRSTISGIGAVVHPPITSHSSNNHDWVTEGDTKKYWERDAGLFDGREQLNATEVVKRSLEKVLPKLLNLEKDNIQDDIAASYPDLTAGVAGYLKVMQEQELFEHWRYFHTVCDAINQEYPWTREVINGMREKWGIPWMDNDGRPQRYHPRLLNSGWLVEDAETEELQEWESRLKNEDDEEVKEVIRQQIREIKINYRQGIQRILDRYYPSANPSDWYVLAAGDGDGMSEWLKGKKMPPYRECIPTKVLKNTTDNKDFQEYLKLNKHMGPSTHSALSRALLDFSNQLVPYLTEQRYAGRLIYSGGDDVLAYTNLWEWDNWLWDIRQCFRGDKDPKNEFTNEGDYWQYNLTSNPSPLTERGVRKISKRPLFTMGRNATISFGIVIAHHSVPLAIALENMWEAETAAKEHTSPNKQKKDAVQVRILYGNGNILKATAKFNVFHQWQELIQISSSTHRNIEASIFEQAANLWEQHPAPISAAIPSWTQTFCNRREQLKDETLKQQFQQILSEFLSSLWNTTQPEELDTQVQSWLKLAAFTLRDRKIKLGVNEHVLV
>NZ_AP018254.1|WP_096620765.1|1295304_1296402_+|CRISPR-associated-protein-Cmr3
MYWYNLTPLDVLLLRDAKPFSPGERAWASSVFPPNGHTIVGAINTLINTGKNDKHPLQIKGPFFCFDQTLYFPRPLGFVGTTPLIPVDWDENSPFHHVKTNPSQPRPLVRPSSIPQSDDEEDSTQETPNYRQYLPYSTVATYLQTGQIKPENWLVQHPGENKPWTMETRPHNTIQENTRQVQDADGYFVENAIRMLPGWSLAVGLNVEIDTPTTIRLGGEGHRVLLHRCDELGKQWEELAALSQRNFISARAKRAIAYLVTPGVFERKDKNHGRETSTCQARPWEWKQGELVSFATDKALAISCRFRDKKDETKSIPAPQVFAATPGSMYYLNQPQSLYQDNPETKVNSWRKLGYSELLWINYQV
>NZ_AP018254.1|WP_096620766.1|1296535_1297411_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MNYLTYTYLLTPLHTGASTQAGNLLGIAREAQTEYPYIPSSSIRGKIRSLLESNPSVQAEAGTFFGERIKNGNQPTEGEVWFADATLLLFPIASFSHQYLWITCPLWLSRWNRWLQNPDLTQLIQECKLQLQDSSKKVVASVKGKQVFLQGAVLKENEISQLSKLSIKANYLDVFKEIPNGNGILNLQEKLVILADQDCAALVEIGLQREVRIALKTDEKVVDGGSFRSEEAIPSETVLFFPWGIKANKDKTPTQTVRELLLEVLNDRLQFGGLEGLGRGWTENKTVAVKK
>NZ_AP018254.1|WP_172892753.1|1297453_1297852_+|hypothetical-protein
MLKLDTRDFSRHAYNGLLEIKKKVRSSDHEKASAIVQGISAYISTWGLHRLCGDGLKYMKARSEDTRYKGQVYQQFLKTLQELSNISFACDDAGSLIGMDLQVYTGLNRLAIELAREWSFWVVPILGEAEQE
>NZ_AP018254.1|WP_096620767.1|1297848_1299801_+|hypothetical-protein
MNRNSQPNKSNSSSDIWREFVQAELKNKSKLGTLLESSVYGGYENKCLTIYFSDDNLRKNAQGQLKVIQTKLENQFRLVCDRIYFKTASAPVANITPQAINMSELGNPLQALYWTEAKLPDENDEVERMKILKDTVTAEKNCQDIYKKLRDRTLKLVDNQEENTLKVTFNWRLRVGGTRGFRELLLPVLHPVFGIPYIPASTLKGAACTWAKKHGASAQICDLLGMLEGKNAKAAKVEFLDAFPIKPCLSIDVATPQWSWERNVVKYQPVPHAFLSLFQPEFLIGLRLTAQGKSDKNLDKNVVQTVKEWLENALLEGIGSRVSSGYGLALLNKPNNIQSSYESTSYEFELWTQGMYGYNPPSRANGYKGDVEFRPSAIRGILRYWFRAVALSLYDISTCQSLESLLFGELGKQGKISIATRINPSPSQEPYCYRGRIYLTATETKYLLIAEQLLILASHLGGVGRGSRRPLHLLNKRMRGCHWEVTNSNLPLAYNERQWKDLFTNLKTAFQQIKSSTNNYTSSPSKLKQRHQDVLDKNAQVWLVKSPNQIPPQKVKNWQTEGTNANVKGTALDFFYGDTRFKGMSNGTGNANVGGALGTPSFVWIKSIFPYQQEPYQVVTIFGCDHPDRLQYAQELDKLRKSNQAILVFG
>NZ_AP018254.1|WP_096620768.1|1299959_1301525_+|hypothetical-protein
MNQVEPVDTLIITVGTRQIGWRCQDGVIRSFGADGNISYPRHVDELYRELGIERGYYQETDEKGQEKTFPWSARDIGKRYYDYCVEWLGEDFSQVELLLDSKIIEQAVKQGLKHIILWGTDQPENVSWFYRRLDTLWLAKLMAGKIRQQYPKLRVDVHTPVIHANDSDAIRQELEVLIIPEILDYFSSSSNREFVLWIQNKGCTPAIASCVEICAAALVRQCRIFNATPNEPEEFFPALANGARTASYSQDFKLIAMGEYFWSLEKLRVISAWERGDFGEAQIWLKVHLNRHSCLYKLAGILTLYTNWEMDKFIPEIGNFINSKEVAKIVDGETIKSWQEALNNMKAKDVIKTWESAFLIELALTRKNYTAAFIQFAQTIERLLFIQFTENRWLEKGFVTIPPEKKDLGNKYNPGFTALIKGWCNYRKIDTNDKWYKLLDRIREKRNELVHQCQSLNLYDIRRVWNDGGLFPVKLSDNPEVIRDLMFDVLQEVTSKVDKVDINKLLVRNLYHWGLTRISHE
>NZ_AP018254.1|WP_096620769.1|1301638_1302208_-|Uma2-family-endonuclease
MTTTSQKMTLEEFLSYDDGTDNLYELENGELIWMPSESEINRRIAMFLLAYLLQQGIPSYRLTVKTEMVVSGKRVSVRLPDLLVLSEELAAAMEGASRSIILMDMPPPLLAVEVVSPNQEKRDYRYKRSEYAARGIAEYWIVDPLQQQVTVLELVEGLYEEKVYRGSDRLNSPLFPQVDLTAEQVLQAK
>NZ_AP018254.1|WP_157780654.1|1302529_1302685_+|hypothetical-protein
MMMLSRIVAIITQFISEAAIEIFAPEHDDYPPTGFQPFTGEPYKGKANYDW

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Crispr_ID: NZ_AP018254_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_12

1404995-1405093

Orphan

Consensus_repeat	Method
GACGTTGCGTAGAGACGTAGCATTGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_12

>merge|NZ_AP018254|12|1404995-1405093|CRISPRCasFinder
GACGTTGCGTAGAGACGTAGCATTGCTACGTCTAAAAGGTATTGCTGAATGCGAATATGAATTGAACATTTGACGTTGCGTAGAGACGTAGCATTGCTA

>NZ_AP018254|12|12|1404995-1405093|CRISPRCasFinder
GACGTTGCGTAGAGACGTAGCATTGCTA	CGTCTAAAAGGTATTGCTGAATGCGAATATGAATTGAACATTT
GACGTTGCGTAGAGACGTAGCATTGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620833.1\|1402949_1403411_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|366837
NZ_AP018254.1\|WP_096620835.1\|1404479_1404926_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_AP018254.1\|WP_096620838.1\|1408647_1410003_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|377544
NZ_AP018254.1\|WP_096620836.1\|1405098_1406184_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375425
NZ_AP018254.1\|WP_096620843.1\|1413194_1416386_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|334294
NZ_AP018254.1\|WP_172892756.1\|1401391_1402807_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_AP018254.1\|WP_172892757.1\|1404225_1404450_+\|SH3-domain-containing-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780662.1\|1407781_1407958_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620841.1\|1412048_1412648_-\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|377965
NZ_AP018254.1\|WP_096620840.1\|1411327_1411672_+\|translation-initiation-factor	unknown	unknown	gnl\|CDD\|236021
NZ_AP018254.1\|WP_096620837.1\|1406542_1407778_-\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_AP018254.1\|WP_157780661.1\|1401065_1401242_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620839.1\|1409986_1411177_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_AP018254.1\|WP_096620834.1\|1403407_1403647_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620829.1\|1395987_1397235_-\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|234848
NZ_AP018254.1\|WP_096620830.1\|1398150_1398633_-\|DUF393-domain-containing-protein	unknown	unknown	gnl\|CDD\|367833
NZ_AP018254.1\|WP_096625942.1\|1416532_1417186_-\|DUF1295-domain-containing-protein	unknown	unknown	gnl\|CDD\|224931
NZ_AP018254.1\|WP_096620831.1\|1399010_1400681_+\|NAD(P)H-quinone-oxidoreductase-subunit-4	unknown	unknown	gnl\|CDD\|237137
NZ_AP018254.1\|WP_096620842.1\|1412711_1412906_-\|DUF4089-domain-containing-protein	unknown	unknown	gnl\|CDD\|372560
NZ_AP018254.1\|WP_096620828.1\|1394852_1395641_+\|SAM-dependent-chlorinase/fluorinase	unknown	unknown	gnl\|CDD\|376645

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620833.1\|1402949_1403411_-\|HNH-endonuclease	gnl\|CDD\|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	4.79999e-06
NZ_AP018254.1\|WP_096620835.1\|1404479_1404926_-\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.02665e-31
NZ_AP018254.1\|WP_096620831.1\|1399010_1400681_+\|NAD(P)H-quinone-oxidoreductase-subunit-4	gnl\|CDD\|237137	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional.	0
NZ_AP018254.1\|WP_096620836.1\|1405098_1406184_-\|hypothetical-protein	gnl\|CDD\|375425	pfam17914, HopA1, HopA1 effector protein family. This family includes the HopA1 effector protein from Pseudomonas syringae. Structurally this protein has an alpha + beta fold. The effector protein HopA1 was shown to affect the EDS1 complex by binding EDS1 directly and activating the immune response signaling pathway.	2.04505e-53
NZ_AP018254.1\|WP_096620843.1\|1413194_1416386_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|334294	pfam00873, ACR_tran, AcrB/AcrD/AcrF family. Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.	0
NZ_AP018254.1\|WP_096625942.1\|1416532_1417186_-\|DUF1295-domain-containing-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	0.00057846
NZ_AP018254.1\|WP_096620841.1\|1412048_1412648_-\|SH3-domain-containing-protein	gnl\|CDD\|377965	pfam08239, SH3_3, Bacterial SH3 domain.	5.01157e-06
NZ_AP018254.1\|WP_096620840.1\|1411327_1411672_+\|translation-initiation-factor	gnl\|CDD\|236021	PRK07451, PRK07451, translation initiation factor.	5.19243e-58
NZ_AP018254.1\|WP_096620837.1\|1406542_1407778_-\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	1.90591e-10
NZ_AP018254.1\|WP_172892756.1\|1401391_1402807_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	4.29726e-42
NZ_AP018254.1\|WP_096620839.1\|1409986_1411177_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.44068e-88
NZ_AP018254.1\|WP_096620829.1\|1395987_1397235_-\|ornithine--oxo-acid-transaminase	gnl\|CDD\|234848	PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.	0
NZ_AP018254.1\|WP_096620830.1\|1398150_1398633_-\|DUF393-domain-containing-protein	gnl\|CDD\|367833	pfam04134, DUF393, Protein of unknown function, DUF393. Members of this family have two highly conserved cysteine residues near their N-terminus. The function of these proteins is unknown.	1.95857e-25
NZ_AP018254.1\|WP_096620838.1\|1408647_1410003_+\|ATP-binding-protein	gnl\|CDD\|377544	pfam05673, DUF815, Protein of unknown function (DUF815). This family consists of several bacterial proteins of unknown function.	2.29711e-137
NZ_AP018254.1\|WP_096620842.1\|1412711_1412906_-\|DUF4089-domain-containing-protein	gnl\|CDD\|372560	pfam13318, DUF4089, Protein of unknown function (DUF4089). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	1.44056e-14
NZ_AP018254.1\|WP_096620828.1\|1394852_1395641_+\|SAM-dependent-chlorinase/fluorinase	gnl\|CDD\|376645	pfam01887, SAM_adeno_trans, S-adenosyl-l-methionine hydroxide adenosyltransferase. This is a family of proteins, previously known as DUF62, found in archaebacteria and bacteria. The structure of proteins in this family is similar to that of a bacterial fluorinating enzyme. S-adenosyl-l-methionine hydroxide adenosyltransferases utilizes a rigorously conserved amino acid side chain triad (Asp-Arg-His) which may have a role in activating water to hydroxide ion. This family used to be known as DUF62.	7.79935e-114

>NZ_AP018254.1|WP_096620835.1|1404479_1404926_-|acyl-CoA-thioesterase
MPFTHHRTVHFSDTDAAGVVYFANVLSICHEAYEASLQANQIQLREFFGNSPLAFPILHANVDFFRPMYCGDDLLIKMIPQQLGRDKFEISYEILVGDMVVSKALTRHVCIDIATRTKQELPEIILNWLENFRRGRENFERDKSRRIM
>NZ_AP018254.1|WP_172892757.1|1404225_1404450_+|SH3-domain-containing-protein
MICTVTDPTGTPLNVRDRPNGKVINSLRNGRDVDILDIKSDNRGRPWARVAGYHNNRYRVWGWVIREFISCYES
>NZ_AP018254.1|WP_096620834.1|1403407_1403647_-|hypothetical-protein
MITQMMVQPSSWVESGIKISKVRDLYLFKFTPELQSRLDDLNDKKKLDTLTSEEEAELTGILELDRIFTLLNAKIIAES
>NZ_AP018254.1|WP_096620833.1|1402949_1403411_-|HNH-endonuclease
MTVNDATRKLVGKRANYLCEYCHALEEASSALFAIDHIIPQSFPNSSDKSDNLALACQRCNSYRYNFTTGIDPKTGKNIPIFNPRTQKWSEHFIWSADGLKIIGITETGRATCNRLDLNDERHNEGSIIKARRLWLKGGWHPPEDDPRLASEV
>NZ_AP018254.1|WP_172892756.1|1401391_1402807_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MPHSGQDVANSSILIDANDRKLQEVVFKLGFAISIGTVGVLLSGQTQPVFAVEPVETNLVGEGSSEDFVIDQGEQISSAILRQKVNRQDSIGGVDDSLNNQGNIDTAQGKENTVKLQLQQKTDRFRADLAQLGSEQIDSVSDNVRGAAKRYKVKPGDTLASIALRHQVSIADIVAANKLINPHQLKISQVLIIPEPKLVAAENYSGVGGNTPIPPAIAEIQPTSQNRQTGIISQNSGLSILNTEIESLRQQYRTQQSHYQQTAPININSNHSVPIAVPRYNQNSATVVIPVPAPLTQPSHRHPATTPTPVASANIPKLPPLAAVDRYLPQVIDENAAPPIAPGTTNTAYIWPATGILTSGYGMRWGRMHRGIDIANKIGTPIVAAAAGVVEFEGKKRGYGNLIDIRHLDGSLTRYAHNHRHFVTVGQKVQQGEMIAHMGNTGFSSGSHLHFEIHPAGKGAVNPVAYLPPRV
>NZ_AP018254.1|WP_157780661.1|1401065_1401242_-|hypothetical-protein
MLNLSVISKSSSKPKHNQPRRTSSRQHVKLPNHRPKWKISQFPYSPILEQRITLDVAV
>NZ_AP018254.1|WP_096620831.1|1399010_1400681_+|NAD(P)H-quinone-oxidoreductase-subunit-4
MIAERFPWLTAIALLPLVASLFIPALPDKGGKLVRWYALGVGIADLMLMCFAFWQHYDASSATFQLAESYAWIPQFGLNWAVSVDGISAPLVLLAGFVTTLAMFSAWQVDRRPRLFYTLMLWLYSAQIGVFIAQDLMLFFIMWEVELVPVYLLINIWGGQKRRYAATKFILYTAAASIFILVAALGMALYGNEFSFDLAVLGLKDYPLGLELLLYAGLLIAFGVKLAIFPLHTWLPDAHGEASSPVSMVLAGVLLKMGGYGLIRLNMEVLADAHIYFAPVLAILGVVNIVYGALNSFAQTNMKRRLAYSSVSHMGFVLLGLASFTDLGVNGAMLQMISHGLIAAVLFFLAGVTYDRTKTMVMDEMGGVGQAMPKVFALFTIGAMASLALPGMSGFASELSVFVGLTTSDIYSSAFCVVTVFLAAVGVILTPIYLLNLLRQVFYGTGADLKCDLNDMQNQGEEDTVCFGTDCVLPNQSIYRDASPREVFIAACFLLPIIGIGLYPKLAMQMYDVKTVAVNSHVRDSYIQIAESNPAIYRNTLAAPKLEMTQVLGTVK
>NZ_AP018254.1|WP_096620830.1|1398150_1398633_-|DUF393-domain-containing-protein
MILILKRSSFMSTAVSKPSWQIKLLYDSECPLCLREVNFLRKRDAGRGLVAFVDIADLNYDPQMHGGVDFATAMGRIHAILPDGTVIKNVEVFRRVYEVLGMGWVYAITKLPIIGAVADFLYGIWADLRLKLTGRPDLATIIQRRQQSLDCVDTGRCRVD
>NZ_AP018254.1|WP_096620829.1|1395987_1397235_-|ornithine--oxo-acid-transaminase
MQAASTIRKNQISNFSNINYYIELENQYGANNYHPLDVVLTEGKGVWVWDTEGKKYLDCLSAYSALNQGHCHPRILQAMIEQASKITLTSRAFRNNQLGLFYEKLSQISGLSKVLPMNSGAEAVETAIKAIRKWAYTIKGVPKNQAEIIVCSNNFSGRTISLISFSTEAQYQDGFFPLTPGFKVIPYGDAQALADAITPNTAAFLVEPIQGEGGIIVPSDGFLKQAETICRQNNVLLIFDEIQTGLGRTGKMFAFQHEGVKPDGITVGKALSGGFYPISAFVSTDEVMGVFTPGDHGSTFGGNPLAAAIGIAALDVIIEEDLPERAANLGQYFIEKLRLIKSPHVKEVRGKGLLIGVELHESSGGARRFCKALAKLGILAKETRDHVIRFAPPLVINQEEIDWSLERIAEVLLVE
>NZ_AP018254.1|WP_096620828.1|1394852_1395641_+|SAM-dependent-chlorinase/fluorinase
MPEPRLLTLLTDFGDRDIYVGVMKGAIAQVNSAIRVVDLTHQVPPQDIMAGRFGLMNAFPYFPQGTVHLVVVDPGVGSQRRAIALELEQGFLVAPDNGIVSGVVERNQVLRVVELTNRRYWRTEIPSRTFHGRDIFATVAAHIASGVSLLDLGNEIDVNSLVSLDISLPRLTTDGVIGCIQYIDRFGNCISNIPDDIVNLETWSVRINGKVIPSGKTYSDVAAGNAIALIGSDGWVEIAVNGGNAHQLLGLNFADTVEVKIY
>NZ_AP018254.1|WP_096620836.1|1405098_1406184_-|hypothetical-protein
MLNNVVPSGDVISAIARDIRIDKNMGIQHPLYHFTITAEAVHRFTENPGELQRKYLNVILRNFIYGTYYSAALVEIIKNTHNLDSQYQGYLLHHNLENDSPWGVEIDFYKKLHSHNHGSGYLEPDWEVLRREPDGSLAVTKAGLTMYATRGVHWDSPRTPRPGDYIAIKMPKNRLHNGYYIAISNIGKIEPSDRNHPQLGRIYLNCSATGGVVLIDALTHKLNHAEIYFTLQMLCHSQAFTRYDAGILIFNLKDYGKIHQILSQIYSQDYFHPEIPILTKYLAPGIGFAEEPQQKFYPQEGYGSNRCQIITNALIETWENGQDSELERIECINKHFAQQQIDLQKPYLNPGSEDIYPTLTN
>NZ_AP018254.1|WP_096620837.1|1406542_1407778_-|aminoglycoside-phosphotransferase-family-protein
MLSSLSSHNVIQYLQEAGLCSSEDGASADSELPQSSKNRNFRVNLSGNRTLLVKQEESAQFDNAPHELFNEWLFHELLCKFPVLGNNPAIASSVIHYDGANAILVREYFPQYQELGQFYRQGGVVHQRIATEIGSSLAALHRATFNRREYRTMLATAPQGMIRYQSYNPAQGIEVLAPDMFGNVPQAAFQFYKLYQRHETLESAIADLAYEWKPCCVTHNDLKLENILLRSGNCDVESKLVRFIDWEACGWGDPIYDVGTLIAEHLRIWLGSIVVDTSLRLEESLQLAMVPLQSLYPYLLALVRSYITSFPRILEYRRDFIVRVVQFAGLVLIRQQQAAILSQKTFNRVGIATLEVAKNLITIPQKSVQTVFGISEAEIIAPTTKLHPVPKMENKQNLLPIYYSKTRLRGC
>NZ_AP018254.1|WP_157780662.1|1407781_1407958_-|hypothetical-protein
MAVFYRGNRIIVGSSTKTTGHADTDSIHTEKDYLPDFAEFCQRLGISKFLQQFKELGK
>NZ_AP018254.1|WP_096620838.1|1408647_1410003_+|ATP-binding-protein
MDNQTVTQVQFLQRQAASLLLYQSVLQSEVGIAFGELLEVIRYGDGDGRGCLQAYGKYFHCLATQQQNWEDFLITQILYADNPFSRQVQVCKFAELSPALINAVRHDLQALQSLYECSCAILSHWVQSVVHLPVSPVLWYQETSSYPHKSAEVKTLMEKFHTEEDWGELVEDLAKHYQKWGMGIFSQYGAFRWENHQLVGIAHPDPITLGDLAGYEHQKATLVKNTQALLSGFPALHVLLYGSRGSGKSSLVKALLNEYADSGLRMIEVGKQELAALPEIIEKIRNLSLKFIIFVDDLSFEDDDDAFKSLKVVLEGNLTARANNVVVYATSNRRHLVREYFSERPKPSEADEIHAWDSNEEKLSFSDRFGLTLTFTPADQSTYLNIVEHLAKKANITIKPEELKFQALQWATRHNGRSGRSARQFIDFLRAELATKRNRVSKRNPISNTKS
>NZ_AP018254.1|WP_096620839.1|1409986_1411177_-|glycosyltransferase-family-4-protein
MKILVLSWEFPPRIVGGIARHVSELYPELVKLGHQIHLITPEFASAPTQETVEGIHVYRVPVAPGNDFFHWVVNMNESMGKLGGQLISELGDFDLIHAHDWLVGDAAIALKHLFKIPLIATIHATEYGRYNGIHNDTQRYIHLKEYNLVYEAWRVIVCTNYMRHELQRAFDTPWEKMDVIYNGIRPEKKRHHLNFHAQDFRRFYAEDGEKIVYYVGRMTYEKGVPLLLSAAPRVLTEMGGNVKFVIIGGGNTDHLKQQAWNLGIWHKCYFTGFLSDEYLDKFQTIADCAVFPSLYEPFGIVALESFASRVPVVVSDTGGFPEVVQHTRTGVVTQTNNPDSLAWGILEVLKNPGYRQWLIDNAYEDLKHRFHWGKLALQTEAVYRQVCQERQITTWC
>NZ_AP018254.1|WP_096620840.1|1411327_1411672_+|translation-initiation-factor
MSPKKKSTNEGVVWQEFGHENLAATARPTPELPPSQQNVRVQATRAGRKGKTVTVITGFQAQPETLQALLKKLKSQCGSGGTIKDNEIEIQGDHKQKILDILLQMGYKAKISGG
>NZ_AP018254.1|WP_096620841.1|1412048_1412648_-|SH3-domain-containing-protein
MPTQTVTGSNAVLKSNSSTTNKVNIRAGASVNHNIVHTGNAGDEVKILEKLKPAGDRYTWYKVQYGNASNQVGWVREDVIELRGETNPSDAATLLYFVTEGKTLRIYTEAGKSLMNVYDNRREQTEITGVVSAKIPKFETSTTSSKFITYVAVKDQVSYYARFIPFGETELVIAGSNDGVITYREKGFRASGSEYRRNQ
>NZ_AP018254.1|WP_096620842.1|1412711_1412906_-|DUF4089-domain-containing-protein
MSEKKLELDFNTFVEQMSRLIDLKLRDEYRTGVTENLERIYTQAKLVNEFELPENMEIFGKFEP
>NZ_AP018254.1|WP_096620843.1|1413194_1416386_+|efflux-RND-transporter-permease-subunit
MSISNLSIRRHIGTLMLTLAVIIVGLFFIIQLPVDLLPSITYPRISVRVGAPGVSPEVAVDEITRPLEEAFAATEGVVQVYSETREGVVNLQLFFEVGGNIDQALNDATAAFNRARGTLPDIIQEPRIVKIDPSQLPVYELALTSPQLSGVDLRVFAEEELARELTVVPGVAAVDISGGVGEEVRVNIDLQRLQALGVGLTNVLNELRDRNQDISGGRILGDSSEPLTRTVGRFANAEEIKNLSFIVAGSNSTNSENPVSLPAKRVYLRDFAEVIDGTENQRIFVSLNQQPAVKVSIRKQPDANTITVVDGVKNRLEALKKTGVIPPNTLLIPTLDESRFIRSSIANVTTSGLLGAGLAALAVIIFLGSLRQTFIIIVSIPLATLAAIILMGLFNLSLNIFSLGGLAFGVGIVVDNSIVMLETIADGINHKKQLAAAENPHPTSLISVVDVAAESSQKVESALIASTATNLVAVIPFLLIGGFISLIFSELILTISFAVAASILIAVTVVPMLTSRMLAWKISSGLHRFFLLREFNLRFLGFTNLYSKLLGKILKIRILVLALTITVFATSTWWMLPQIPQEILPRINTGQASLFASFPPGTPIETNRQVMTKVDEILQNQPETEYVFTSVGGTLFGTSTFANPLRSSSTITLKPGSDVNAYIEKVTKEFNQLNLVDIRLRLAPGQVRGLILNNSPTRGADLDIVLQSEDSDALQAAGRQVLAALDQNVTLARFRPDADDRQPEIQIRPDWERTAELGLTARDIGDTIQTAIEGTIPTRLQRGNRLVDVRVQLNEQSIQNTSQLNSLPLFTQGNRQIRISDVATIREDFAPGEIKRINQRQVYIIAGNLSEGASLSQAANQVEQVLDELELPEGVTVLPSAAADSNNQLQNSLKILGGLAIFLVFVVMAVQYNSLVDPLVIILTVPLAITGGVLGLYITQTAIGATVIVGAILLVGIVVNNAIIMVELANQIRAEAQITRQEAIVQAAPQRLRPIFMTTLTTVLGMFPLALGIGEGAEFLQPMGVVVFSGLSLATLLTLVIIPCFYVLLHDIFASRWLKVFRG
>NZ_AP018254.1|WP_096625942.1|1416532_1417186_-|DUF1295-domain-containing-protein
MKVKYPINLSKALTGLVILGMMFFFDNFTLGAWVYLALHGTYGFLWLLKDRIYPDKQWEQEVSLIQAILAFVVVCLYWVAPYLLISRGSVPPLPLVAAAISLNIIGVFLHFTSDAQKYYTLKYRPGLITEGFFARSRNTNYLGEIFIYSSFAMLTQHWLPFVIFAGFIIVIFIPNMLKKDKSLSRYPEFAAYKNNSGLLLPNILGESSQPQNQSPIS

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Crispr_ID: NZ_AP018254_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_13

1483597-1483711

Orphan

Consensus_repeat	Method
AATTTTCCTTCTACTCCCTATTCACTACTCCCCACTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_13

>merge|NZ_AP018254|13|1483597-1483711|CRISPRCasFinder
AATTTTCCTTCTACTCCCTATTCACTACTCCCCACTCCCCATAAGTTTTAGGAACTTGTGAGAAATGCGGGTGTTAAATTTTCCTTCTACTCCCTATTCACTACTCCCTACTCCC

>NZ_AP018254|13|13|1483597-1483711|CRISPRCasFinder
AATTTTCCTTCTACTCCCTATTCACTACTCCCCACTCCC	CATAAGTTTTAGGAACTTGTGAGAAATGCGGGTGTTA
AATTTTCCTTCTACTCCCTATTCACTACTCCCTACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620888.1\|1474159_1475299_-\|beta-ketoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|235653
NZ_AP018254.1\|WP_096620895.1\|1486367_1486637_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_AP018254.1\|WP_096620896.1\|1486813_1488022_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349936
NZ_AP018254.1\|WP_096620889.1\|1476074_1476899_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238905
NZ_AP018254.1\|WP_096620891.1\|1482115_1482580_+\|MEKHLA-domain-containing-protein	unknown	unknown	gnl\|CDD\|378025
NZ_AP018254.1\|WP_096620898.1\|1489074_1489686_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_AP018254.1\|WP_096620894.1\|1485866_1486346_-\|PAM68-family-protein	unknown	unknown	gnl\|CDD\|371813
NZ_AP018254.1\|WP_157780663.1\|1477069_1477210_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620886.1\|1469679_1471416_+\|S8-family-peptidase	unknown	unknown	gnl\|CDD\|173804
NZ_AP018254.1\|WP_096620890.1\|1477279_1481020_-\|hydantoinase-B/oxoprolinase-family-protein	unknown	unknown	gnl\|CDD\|215358
NZ_AP018254.1\|WP_096620887.1\|1471466_1473668_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|131525
NZ_AP018254.1\|WP_157780664.1\|1493488_1493629_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620885.1\|1468085_1468289_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620892.1\|1483072_1483435_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_AP018254.1\|WP_096620897.1\|1488752_1488980_+\|DUF167-domain-containing-protein	unknown	unknown	gnl\|CDD\|376843
NZ_AP018254.1\|WP_096620901.1\|1492182_1492788_-\|chorismate-lyase	unknown	unknown	gnl\|CDD\|366866
NZ_AP018254.1\|WP_096620899.1\|1490427_1491618_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
NZ_AP018254.1\|WP_172892759.1\|1481691_1481859_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620893.1\|1483989_1485048_-\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|237376
NZ_AP018254.1\|WP_096620900.1\|1491683_1492073_-\|DUF2358-domain-containing-protein	unknown	unknown	gnl\|CDD\|370865

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620888.1\|1474159_1475299_-\|beta-ketoacyl-ACP-synthase	gnl\|CDD\|235653	PRK05952, PRK05952, beta-ketoacyl-ACP synthase.	0
NZ_AP018254.1\|WP_096620896.1\|1486813_1488022_+\|amidohydrolase	gnl\|CDD\|349936	cd08014, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of uncharacterized bacterial proteins predicted as putative amidohydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
NZ_AP018254.1\|WP_096620900.1\|1491683_1492073_-\|DUF2358-domain-containing-protein	gnl\|CDD\|370865	pfam10184, DUF2358, Uncharacterized conserved protein (DUF2358). DUF2358 is a family of conserved proteins found from plants to humans. The function is unknown.	1.76412e-42
NZ_AP018254.1\|WP_096620889.1\|1476074_1476899_-\|peptidylprolyl-isomerase	gnl\|CDD\|238905	cd01924, cyclophilin_TLP40_like, cyclophilin_TLP40_like: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) similar ot the Spinach thylakoid lumen protein TLP40. Compared to the archetypal cyclophilin Human cyclophilin A, these proteins have similar peptidylprolyl cis- trans isomerase activity and reduced affinity for cyclosporin A. Spinach TLP40 has been shown to have a dual function as a folding catalyst and regulator of dephosphorylation.	6.16779e-71
NZ_AP018254.1\|WP_096620891.1\|1482115_1482580_+\|MEKHLA-domain-containing-protein	gnl\|CDD\|378025	pfam08670, MEKHLA, MEKHLA domain. The MEKHLA domain shares similarity with the PAS domain and is found in the 3' end of plant HD-ZIP III homeobox genes, and bacterial proteins.	4.48508e-76
NZ_AP018254.1\|WP_096620898.1\|1489074_1489686_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	3.58459e-44
NZ_AP018254.1\|WP_096620895.1\|1486367_1486637_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.35355e-46
NZ_AP018254.1\|WP_096620886.1\|1469679_1471416_+\|S8-family-peptidase	gnl\|CDD\|173804	cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.35206e-110
NZ_AP018254.1\|WP_096620890.1\|1477279_1481020_-\|hydantoinase-B/oxoprolinase-family-protein	gnl\|CDD\|215358	PLN02666, PLN02666, 5-oxoprolinase.	0
NZ_AP018254.1\|WP_096620894.1\|1485866_1486346_-\|PAM68-family-protein	gnl\|CDD\|371813	pfam11947, DUF3464, Protein of unknown function (DUF3464). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.	2.69288e-76
NZ_AP018254.1\|WP_096620892.1\|1483072_1483435_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	1.2383e-24
NZ_AP018254.1\|WP_096620897.1\|1488752_1488980_+\|DUF167-domain-containing-protein	gnl\|CDD\|376843	pfam02594, DUF167, Uncharacterized ACR, YggU family COG1872.	1.24792e-23
NZ_AP018254.1\|WP_096620901.1\|1492182_1492788_-\|chorismate-lyase	gnl\|CDD\|366866	pfam01947, DUF98, Protein of unknown function (DUF98). This is a family of uncharacterized proteins.	1.44938e-81
NZ_AP018254.1\|WP_096620899.1\|1490427_1491618_-\|ArsA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	3.62125e-132
NZ_AP018254.1\|WP_096620893.1\|1483989_1485048_-\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|237376	PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional.	0
NZ_AP018254.1\|WP_096620887.1\|1471466_1473668_-\|glycosyltransferase	gnl\|CDD\|131525	TIGR02472, putative_sucrose-phosphate_synthase, sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.	0

>NZ_AP018254.1|WP_096620892.1|1483072_1483435_+|STAS-domain-containing-protein
MSPAAENQVILFELPGSIDLSGGNLLTEEIARIIPAKNQIWVFNFASVNFMDSSGLVALVNGYKKARQHSCRFVLCNLQAPVRLILEVTQLDSVFEIYDTYEDIFAESASSALPDLVVAS
>NZ_AP018254.1|WP_096620891.1|1482115_1482580_+|MEKHLA-domain-containing-protein
MTDAIAFPDEIIRHTQNLMRSYQHWTGQALFDLSVTPEDLTQLVFDAPFVVISHGTESDPIYNYGNRAALELWEMSWADFTSMPSRYSAEPAEQEERNQLLSRGSEKGFCYYSGVRISSSGRRFYIENGTLWNVLNPDNTYAGQAAMFFQWRYV
>NZ_AP018254.1|WP_172892759.1|1481691_1481859_-|hypothetical-protein
MAKRRNPKKEKALRNQAYARKFRKRTTTGRFQRRFQQQSSGKSEEDENETAMGAE
>NZ_AP018254.1|WP_096620890.1|1477279_1481020_-|hydantoinase-B/oxoprolinase-family-protein
MLKVFADRGGTFTDLVVVTDDQSIVDRLSHAPERFQITPLANRTWMIIYKLLSEQPERYQDAVIQGIRDVLGLAGNQPIPPGAVDVVKMGTTVATNALLEHKGERTILLITQGFGDALAIGYQNRPHIFARQIILPDRVYERVIEVRERYTAQGEEIIPITDQEKQRLQTLLQKAYEDGMRAVAIAFMHGYRYPMHEQQVAELARQVGFTQVSVSHTVSPLMKLIRRGDTTVVDAYLSPILRRYVDQVSTALSQSATGTKLEFMKSDGGLTEASRFQGKDSILSGPAGGIVGAVKTSTAAGFSQIIGFDMGGTSTDVSHYNGEYERTLETEIAGVRMYVPMMSIHTVAAGGGSILRFDGDRYRVGPESAGANPGPACYRRGGPLTVTDCNVRLGKIQPQFFPQVFGPQGNLPIDDQVVMEKFAQLNAEIRAQTGDTRSDEEVAAGFLAIAIEKMANAIKKISIQRGYDVTQYTLCCFGGAGGQHACLIAEALGMKRIFIHPLAGVLSAYGIGLADVRILKERAIEAKLEESIMASLEQALVDLDGESRGEIIAQGVSPERIQTVPKIRLRYQGTDSALNVDFAKIDIMRSQFEQMYRQRYGFSFPDKDLIVEAAFVEAIAPAEPIPVPLPPHQRTTPLQAIASVQIYTKGAWHDTPVYRRQDLKVGDRITGAALILEATGTNVIEPGWCAEVTPQNYLILTKVEEITTTPSLPIATTTRPDPVMLEIFNNLFQSIAEEMGIVLQNTSYSVNIKERLDFSCAIFDHQGQLVANAPHIPVHLGSMGDSVGSLIRVKGSTMKPGDVFAANNPYNGGTHLPDITVITPVFLPGHTTPTFYVASRGHHADIGGITPGSMPPYSQSIDQEGILLDNLQIVDQGGFLEAELLNVLANSPYPTRNPMQNLGDLQAQIAANERGVQELCRLVATYGLDTVQTYMQYIQDNAEASVRRAIEVLKPGKFTYQLDVDAPFYAASLGNNHHICQICVEIQIDAATRSARIDFTGTSPQQPTNLNAPLAVCKAVVLYVFRTLVADDIPLNAGCLKPLEIIVPEGCLLNPHPPAAVVAGNVETSQAIANALYGALGVMAASQGTMNNFTFGNQHYQYYETICGGSGAGASFDGADAVHTHMTNSRLTDPEVLEWRFPVILEEFAIRTHSGGIGKYRGGNGVIRRLRFRENMTAAILSGHRIVPPFGLMGGQPGKTGRNLIVRSDGTEEILAGKAEVVVNPGDVFVIETPGGGGFGSVIVET
>NZ_AP018254.1|WP_157780663.1|1477069_1477210_-|hypothetical-protein
MAGLSEFRNLIPKLYQDCGELFVSQKQPTQAIALYEKFLDQFPVIP
>NZ_AP018254.1|WP_096620889.1|1476074_1476899_-|peptidylprolyl-isomerase
MRLKLSRFCITFLILTVLTLNGCANQSSISNNAINSAVAAATSQAVASNPQSTKTEDGEEKIANNTTKEVIPGMNNIPRLEGKATVVMTVKGSPITIEVDGNNAPITAGNFVDLVQRGVYDGLVFHRVVREPQPFVVQGGDPQGKDEKFPIQRLGTGSFIDPETKNVRYVPLEIKPKGAAEPIYGKTFKEAKMSQPPELNHKLGAVAMARSQLPNSASSQFYFALTELGFLDGDYAVFGYVTEGMDVVDKIQQGDRIDSAKVTEGAENLKKPNE
>NZ_AP018254.1|WP_096620888.1|1474159_1475299_-|beta-ketoacyl-ACP-synthase
MRVVVTGIGLQSALGTSLQTSWQNLIAGQSGIKIHQPFLELEPLPLGMIADRPQTLGEITAPILTSALLDAGLSLSSPLVDTGVVIGSSRGFQAQWEALTRCGYTDKSQAENWLENLPHMNAIAVARKIGATGIVQAPMAACATGIVAIAQATSLIKFGQCHRVITGAIEAPITPLTITGFRQMGALAKTGAYPFDRERQGLVLGEGGAILVLESLELAQQRQAQIYGEILGFALTNDAYHPNAPDPSGKSAIIAIQKCLQRSSRQVSDIEYIHAHGTATIRNDIVESQIIQTVFTNHPYVSSTKGATGHTIGASGALGVAFSLMALKTQILPPCVGLNNSEFPVNLLNTAKEIPVQNIICWSFGFGGTNAAIALASID
>NZ_AP018254.1|WP_096620887.1|1471466_1473668_-|glycosyltransferase
MLNSSGLYILLVSVHGLIRGDNLELGRDADTGGQIKYVLELALALAANPEVKRVDLVTRAVHDPKVSPDYGKSIEVLNDKTQIVRLNCGPRRYLRKEVLWPYLDAFADELLRYLRQIGQLPDVIHSHYADAGYVACRVAGWLGVPLVHTGHSLGRVKRQRLLENGSKPESIESNFHISTRIEAEETTLASASLIIASTNQEVVQQYGMYDHYQPKRMVVIPPGVALDQFYPPPQDWQPPQITQEIYRFLQDPNKPIIMALSRPAIRKNVSTLVKAYGEDAELRQLANLLLVLGNRDDITTMESGPRQVLTEILQLIDRYDLYGHVAYPKHHTADDVPELYRLLTATQGVFINPALTEPFGLTLIEATACGVPIIATADGGPRDILAACHNGQLIDPLNIQQIQDALKLALTDKKQWQEWSKNGLNNVRQHFSWDSHVKSYLEQVQQLKQLRVQSLLSPLRQAPADNLPDWQVPETNRLPTADRFLVCEIDNTLLGDQEALKKLIERLRSEGNTTGVGIATGRNLPSTLEMLEEWRFPMPDLLIVSTGSEIYYGPKVVLDTNWQRHINYRWQPEEVRQALAELPGIELQPPEGQGKFKISYFVDMQKSLSFREIMRHLRRRRLHVKGIFSHNMYLDLLPIRASKGDAIRYSALKWGLPIKRFLVAGASGNDESMLAGNTLGVVVGNYSQEIEKLRGYSQIYFAKGHHAWGILEALDYYDFFGSLSPQEQEMVAV
>NZ_AP018254.1|WP_096620886.1|1469679_1471416_+|S8-family-peptidase
MRRDKLSPGLILAVEDFENEGDEGLVTHRRSLGIVAPKSTIKPTRSIVFVYCDENADLSHLEQYGIEFNQNHGSVRTAYLSMEAIDALSEDPAIQRIKPSRKMKLLMETAPARVKLPEFKLKTKLTGKGVIIGVIDSGIDAKHPAFAGRILRIWDQTLPGSGVPEGKYGAELTGEQLTISQDTDAHGTHVAGIASAQDETYGGVAPDAELIVVKSDLQDAHIADAVRYVFRIATELGRPAVVNMSLGGHADAHDGSDSLSKVIDAETGPGRIVCCAAGNEGNDNIHGQGQVAVNQMHSMRFRVPWGQVGIVWLNGWYSGETQLEIQMRSPSGFVTPWQKVVSDPSVNPAQEYRLPDARVQVVAPGPDPMNGDYNFFVQIRGVSGSVPVTGGVWQLRLRNKGQKDTQVNVWTLDDAGAVFFTGQSAQDSMKIGSPGAAASAITVASFTTRNQYTDIDNQKREVGLTLDDISDFSSEGPLRNGAQKPDVAAPGAMIVSTLSSSAKMPRSMMLNSKFVAMAGTSMATPFVSGLVALLLERDPQLTPDAIKEIFRKNSQIPGQEQGTFDIKWGFGLINAENL
>NZ_AP018254.1|WP_096620885.1|1468085_1468289_+|hypothetical-protein
MYMTPKSGLLLAGSCITAIAAVGSVFELTSGQPDFGTQNTAIILALSIPLTIIFFLAAVKDTKANIK
>NZ_AP018254.1|WP_096620893.1|1483989_1485048_-|3-deoxy-7-phosphoheptulonate-synthase
MIIVMKAGSPEIEIERINAELSTWGLNPEKIVGKHKVVIGLVGETVDLDPLQIQEVSPWIEEVLRVEKPYKRASREYRHGEASEVVVSTPDGPVTISEHHPVAVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALDLLAAAREKSGLGIITEVMDASDLERIVEVADVVQVGARNMQNFSLLKKVGAQPKPVLLKRGMAATIEDWLMAAEYILAAGNPNVILCERGIRSFDRQFTRNLLDISVVPVLRQLTHLPIMIDPSHGTGWASYVPSMAMASIAAGCDSLMIEVHPNPKKALSDGPQSLTPDAFDQLMKELAVIGKTVGRWELPVAAVV
>NZ_AP018254.1|WP_096620894.1|1485866_1486346_-|PAM68-family-protein
MSTEPEANPIPFEPKTKRQKTTTKKSQTPVVKEKPTQTHGQKPPFNKKDMAIPEVISQRMIKRVAFFSGTPTILGISTLIISYLLITFAHITLPPIAVLLVNMGFFGLGVLGITYGVLSASWDENRTGTLIGWNEFTTNFGRMVTVWRETRKNKANPSS
>NZ_AP018254.1|WP_096620895.1|1486367_1486637_-|30S-ribosomal-protein-S15
MALKQQEKQEIMSKYQVHETDTGSADVQVAMLTERINRLSEHLKTNKKDYSSRRGLLKIIGQRKRLLAYIQKYDQPRYKDLITRLGIRG
>NZ_AP018254.1|WP_096620896.1|1486813_1488022_+|amidohydrolase
MLTQIKNLASKIAPRLIEIRRHLHSHPELSGEEYQTAAFVAGVLSSSGLHVVEGVGKTGVVGELVGNGDDKRVLAIRADMDALPIQERTQLDFASRIPGVMHACGHDVHTTVGLGVAMVLADLAGNLPGKTRFLFQPAEEIAQGASWMVKDGVMEDVSAIFGLHVFPSIPGGSIGLRYGALTAAADELEIKIFGESGHGARPHEAIDAIWIASQVITTLQQAISRTHNPLRPVVLSIGQIQGGRAPNIIADQVELRGTVRSLHRETRAQLPKWIETIVANTCNSYGAKYQVDYRQGVPSVQNDYNLTQILQAAAEEAWGSDRVQILPEPSLGAEDFSVYLDYAPGTMFRLGVGLAQAPNHPLHHPQFEVDESAIITGVVTLAYAAYKYWQQGLYSEDNLYQI
>NZ_AP018254.1|WP_096620897.1|1488752_1488980_+|DUF167-domain-containing-protein
MQKLTIKVKPNSKQVKIVEDNQGNLVIYLKSPPVDGKANAELIEILAEKFSIPQKSVRIKSGFHSRQKVVEIDIN
>NZ_AP018254.1|WP_096620898.1|1489074_1489686_-|glutathione-S-transferase-family-protein
MNTLRLYDFLPSGNGYKIRLLLAQLGVPFERIELDVTKGETRTSEFLSKNPNGKIPLLEISPGQYLAESNAILIYLSEGTEFLPYERFARAQVFQWLFFEQNSHEPYIATPRFWLSILKQGEEHQQEINQRQQMGYKALDVMENHLQNRDFFVNQRYSIADIALFAYTHVANEGGYDLSRYSAINRWIEQVKSQPGHINIHEV
>NZ_AP018254.1|WP_096620899.1|1490427_1491618_-|ArsA-family-ATPase
MRVILMTGKGGVGKTSVAAATGLRCAEMGYRTLVLSTDPAHSLADSFDLELGHEPREVKPKLWGAELDALLELEANWGSVKRYITQVLQARGLDGVQAEELAVLPGMDEIFGLVRMKRHYDEGTYDVLIIDSAPTGTALRLLSLPEVSGWYMRRFYKPFQNISVALRPLVEPIFKPIAGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTQTSVRLVANPEKMVIKESLRAHAYLSLYNVATDMVVANRIIPEEVQDPFFQTWKDNQKQYRQEIHDNFHPLPVKEVPLFSEELCGLAALERLKNTLYPGDEDPTQVYYKENTIRVVQEQNQYSLELYLPGIPKNQIQLSKSGDELNVRIGNHRRNLVLPQALAALQPAGAKMEDDYLKIRFADTSNI
>NZ_AP018254.1|WP_096620900.1|1491683_1492073_-|DUF2358-domain-containing-protein
MDIIDILTTDYQRFPVNQTYSIYAKDVYFQDPMNKFRGIERYQKMIQFIQTWFLNIKMDLHSIHKEDNRIKTEWTLHWNTPLPWQPRISISGWSDLLLNDDGLIVSHIDYWHTSRFDVLKQHFFPRNSQ
>NZ_AP018254.1|WP_096620901.1|1492182_1492788_-|chorismate-lyase
MTATFIPSKNKTSPVGWYRLNPIWQGDEEVIQQGLPHTQLAPAWQLLLLGDGSPTRHLQLLTGEPTEVDVIDMSPIGMDLDHAPDLIQAVPGPRLRRQVWLRTASGQRLAYATSWWEASHVDEYLQNRSLPIWASLARLRTELYRDVQGIYYGRSQSLEIGFNVSGPFWGRHYLFWHHGQPLTLIYEVFSPYLTKYLGPTQ
>NZ_AP018254.1|WP_157780664.1|1493488_1493629_+|hypothetical-protein
MILGLSRNNQLRSQVVMIFPREERKCDRLTAELLTIILSLKLENEV

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Crispr_ID: NZ_AP018254_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_14

1498437-1498512

Orphan

Consensus_repeat	Method
ATTTTGGATTACTTTGGTCTCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_14

>merge|NZ_AP018254|14|1498437-1498512|CRISPRCasFinder
ATTTTGGATTACTTTGGTCTCTTAAGAGGTGACGAAAGTCCTTATAAATTTGAATTTTGGATTACTTTAGTCTCTT

>NZ_AP018254|14|14|1498437-1498512|CRISPRCasFinder
ATTTTGGATTACTTTGGTCTCTT	AAGAGGTGACGAAAGTCCTTATAAATTTGA
ATTTTGGATTACTTTAGTCTCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620910.1\|1503703_1504234_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|224442
NZ_AP018254.1\|WP_096620913.1\|1506794_1508198_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623
NZ_AP018254.1\|WP_096620911.1\|1504329_1505106_-\|armadillo-type-fold-containing-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892760.1\|1497850_1498408_+\|TolB-family-protein	unknown	unknown	gnl\|CDD\|223893
NZ_AP018254.1\|WP_096620905.1\|1496342_1497320_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369367
NZ_AP018254.1\|WP_096625948.1\|1508347_1509127_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_AP018254.1\|WP_096620898.1\|1489074_1489686_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_AP018254.1\|WP_096620909.1\|1502888_1503305_+\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372980
NZ_AP018254.1\|WP_096620915.1\|1510489_1511815_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|236055
NZ_AP018254.1\|WP_096620912.1\|1505210_1505777_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620914.1\|1509628_1510072_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380392
NZ_AP018254.1\|WP_096625946.1\|1498943_1499462_+\|TolB-family-protein	unknown	unknown	gnl\|CDD\|223893
NZ_AP018254.1\|WP_096620902.1\|1493618_1494980_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_AP018254.1\|WP_096620904.1\|1495849_1495969_+\|Photosystem-II-reaction-center-X-protein	unknown	unknown	gnl\|CDD\|368995
NZ_AP018254.1\|WP_157780664.1\|1493488_1493629_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620907.1\|1499468_1500476_-\|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|183605
NZ_AP018254.1\|WP_096620901.1\|1492182_1492788_-\|chorismate-lyase	unknown	unknown	gnl\|CDD\|366866
NZ_AP018254.1\|WP_096620899.1\|1490427_1491618_-\|ArsA-family-ATPase	unknown	unknown	gnl\|CDD\|223082
NZ_AP018254.1\|WP_096620903.1\|1495013_1495304_-\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NZ_AP018254.1\|WP_096620900.1\|1491683_1492073_-\|DUF2358-domain-containing-protein	unknown	unknown	gnl\|CDD\|370865

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620910.1\|1503703_1504234_-\|thermonuclease-family-protein	gnl\|CDD\|224442	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].	7.16846e-27
NZ_AP018254.1\|WP_096620913.1\|1506794_1508198_-\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	4.81588e-131
NZ_AP018254.1\|WP_096620914.1\|1509628_1510072_+\|cupin-domain-containing-protein	gnl\|CDD\|380392	cd06987, cupin_MAE_RS03005, Microcystis aeruginosa MAE_RS03005 and related proteins, cupin domain. This family includes bacterial and some eukaryotic proteins homologous to MAE_RS03005, a Microcystis aeruginosa protein of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.04115e-74
NZ_AP018254.1\|WP_172892760.1\|1497850_1498408_+\|TolB-family-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	2.99711e-37
NZ_AP018254.1\|WP_096620905.1\|1496342_1497320_+\|hypothetical-protein	gnl\|CDD\|369367	pfam07444, Ycf66_N, Ycf66 protein N-terminus. This family represents the N-terminus (approximately 80 residues) of Ycf66, a protein that seems to be restricted to eukaryotes that contain chloroplasts and to cyanobacteria.	5.62275e-44
NZ_AP018254.1\|WP_096625948.1\|1508347_1509127_+\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	4.77581e-44
NZ_AP018254.1\|WP_096620898.1\|1489074_1489686_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	3.58459e-44
NZ_AP018254.1\|WP_096620909.1\|1502888_1503305_+\|AbrB-family-transcriptional-regulator	gnl\|CDD\|372980	pfam14250, AbrB-like, AbrB-like transcriptional regulator. This family of DNA-binding proteins is likely to act as a transcriptional regulator. This family does not include E.coli AbrB, which belongs to pfam05145.	4.11732e-40
NZ_AP018254.1\|WP_096620915.1\|1510489_1511815_-\|dihydroorotase	gnl\|CDD\|236055	PRK07575, PRK07575, dihydroorotase; Provisional.	0
NZ_AP018254.1\|WP_096625946.1\|1498943_1499462_+\|TolB-family-protein	gnl\|CDD\|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	1.6159e-32
NZ_AP018254.1\|WP_096620902.1\|1493618_1494980_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_AP018254.1\|WP_096620904.1\|1495849_1495969_+\|Photosystem-II-reaction-center-X-protein	gnl\|CDD\|368995	pfam06596, PsbX, Photosystem II reaction centre X protein (PsbX). This family consists of several photosystem II reaction centre X protein (PsbX) sequences from both prokaryotes and eukaryotes.	5.74408e-16
NZ_AP018254.1\|WP_096620907.1\|1499468_1500476_-\|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl\|CDD\|183605	PRK12577, PRK12577, succinate dehydrogenase/fumarate reductase iron-sulfur subunit.	0
NZ_AP018254.1\|WP_096620901.1\|1492182_1492788_-\|chorismate-lyase	gnl\|CDD\|366866	pfam01947, DUF98, Protein of unknown function (DUF98). This is a family of uncharacterized proteins.	1.44938e-81
NZ_AP018254.1\|WP_096620899.1\|1490427_1491618_-\|ArsA-family-ATPase	gnl\|CDD\|223082	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning].	3.62125e-132
NZ_AP018254.1\|WP_096620903.1\|1495013_1495304_-\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	7.98134e-13
NZ_AP018254.1\|WP_096620900.1\|1491683_1492073_-\|DUF2358-domain-containing-protein	gnl\|CDD\|370865	pfam10184, DUF2358, Uncharacterized conserved protein (DUF2358). DUF2358 is a family of conserved proteins found from plants to humans. The function is unknown.	1.76412e-42

>NZ_AP018254.1|WP_172892760.1|1497850_1498408_+|TolB-family-protein
MRLSTSLFRLRLQISWSLFFIAMTILLAGCGGNSIPIGPTSLNSRYTEEQPALSGNGRLLAFVSNRNGTHQLLVYDLETQEFIQLPGLNRPNTIIESPSLSFNGRYIAYITSDQGRPVVALYDRAIGRSQVVTPTYRGWLRNPHISPDGRYIVFETTIRGQWDIEVLDRGPNIELDIPNGATVGQ
>NZ_AP018254.1|WP_096620905.1|1496342_1497320_+|hypothetical-protein
MVIFGLNSASVLAQVNFGTNSASILGIFLAIAGAALYFLRTVRPELSRDQDIFFAAVGLLCGFILIFQGWRLDPILQFGQLLLVGSTVFFAFESIRLRGIATEQAKRNTPIVDRDRPVSDDYEYGGRSSRYREEREVVGVEPLPYYDDDYDEPRRRIPASRDSRSGRDSRDSYSYDDETSTRSRRSSRKSDRPERDTNNSEYPRRRSSSTSGSSRPSSRSYEKYDDEDWNSSSRPQNEDDWGSSGVQESRPPRRRPTDSSRPSDGVEDDSPSPRPRRRRPSSDTPSPSKSDDDAIPTDYVDYKPIEPVDQEFGNPGKYDDDTPIT
>NZ_AP018254.1|WP_096620904.1|1495849_1495969_+|Photosystem-II-reaction-center-X-protein
MTPSLANFLWSLFWGTVIVVIPATVALIFISQSDKIQRS
>NZ_AP018254.1|WP_096620903.1|1495013_1495304_-|YggT-family-protein
MTSIEITNISLGIILGIMMFLFIFRIVLTWYPQVELNKFPINLVTFPTEPFLAPTRKLIPPMGGVDITPIIWFGIVSLLREILLGQQGLLTMMGRV
>NZ_AP018254.1|WP_096620902.1|1493618_1494980_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MKFDKILIANRGEIALRVLRACEEMGIATVAVHSTVDRNALHVQLADEAVCIGEAPSGKSYLNIPNIISAALTRNASAIHPGYGFLSENAKFAEICADHQIAFIGPQPEAIRLMGDKSTAKETMQRAGVPTIPGSNGLVESETEGLQLAKKIGYPLMIKATAGGGGRGMRLVRDESEFVKLFQAAQGEAGAAFGNPGVYLEKFIEQPRHIEFQILADNYGNVIHLGERDCSIQRRNQKLIEESPSPALDEELRQKMGQAAVKAAQFINYTGAGTIEFLLDRSGEFYFMEMNTRIQVEHPVTEMVTGIDLLVEQIRIAQGDRLKLTQDQIQLRGHAIECRINAEDPDHNFRPSPGRISGYLPPGGPGVRIDSHVYTDYQIPPYYDSLIAKLIAWGPDRSTAITRMKRALRECAITGVTTTIGFHQKIMEVPQFIQGQVSTNFVQELGDSLRSRD
>NZ_AP018254.1|WP_157780664.1|1493488_1493629_+|hypothetical-protein
MILGLSRNNQLRSQVVMIFPREERKCDRLTAELLTIILSLKLENEV
>NZ_AP018254.1|WP_096620901.1|1492182_1492788_-|chorismate-lyase
MTATFIPSKNKTSPVGWYRLNPIWQGDEEVIQQGLPHTQLAPAWQLLLLGDGSPTRHLQLLTGEPTEVDVIDMSPIGMDLDHAPDLIQAVPGPRLRRQVWLRTASGQRLAYATSWWEASHVDEYLQNRSLPIWASLARLRTELYRDVQGIYYGRSQSLEIGFNVSGPFWGRHYLFWHHGQPLTLIYEVFSPYLTKYLGPTQ
>NZ_AP018254.1|WP_096620900.1|1491683_1492073_-|DUF2358-domain-containing-protein
MDIIDILTTDYQRFPVNQTYSIYAKDVYFQDPMNKFRGIERYQKMIQFIQTWFLNIKMDLHSIHKEDNRIKTEWTLHWNTPLPWQPRISISGWSDLLLNDDGLIVSHIDYWHTSRFDVLKQHFFPRNSQ
>NZ_AP018254.1|WP_096620899.1|1490427_1491618_-|ArsA-family-ATPase
MRVILMTGKGGVGKTSVAAATGLRCAEMGYRTLVLSTDPAHSLADSFDLELGHEPREVKPKLWGAELDALLELEANWGSVKRYITQVLQARGLDGVQAEELAVLPGMDEIFGLVRMKRHYDEGTYDVLIIDSAPTGTALRLLSLPEVSGWYMRRFYKPFQNISVALRPLVEPIFKPIAGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTQTSVRLVANPEKMVIKESLRAHAYLSLYNVATDMVVANRIIPEEVQDPFFQTWKDNQKQYRQEIHDNFHPLPVKEVPLFSEELCGLAALERLKNTLYPGDEDPTQVYYKENTIRVVQEQNQYSLELYLPGIPKNQIQLSKSGDELNVRIGNHRRNLVLPQALAALQPAGAKMEDDYLKIRFADTSNI
>NZ_AP018254.1|WP_096620898.1|1489074_1489686_-|glutathione-S-transferase-family-protein
MNTLRLYDFLPSGNGYKIRLLLAQLGVPFERIELDVTKGETRTSEFLSKNPNGKIPLLEISPGQYLAESNAILIYLSEGTEFLPYERFARAQVFQWLFFEQNSHEPYIATPRFWLSILKQGEEHQQEINQRQQMGYKALDVMENHLQNRDFFVNQRYSIADIALFAYTHVANEGGYDLSRYSAINRWIEQVKSQPGHINIHEV
>NZ_AP018254.1|WP_096625946.1|1498943_1499462_+|TolB-family-protein
MKSPVLFLLLSSLLSSCVGYPRLLSYPFDPGGRSLNSGASEQNPQISGRFVVFSSDRRGSQDIYMFDTITRNLIDLPGLNSLDTIASHPSASSDGKYIVFAGSRQGRSDIFLFDRETRQLRNLTANLSTEVRSPTISADGTRIAFETTVNGQWDIWVYNRTGDRLNIPQDPR
>NZ_AP018254.1|WP_096620907.1|1499468_1500476_-|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MEVRFKIIRQQTGKTPKAQTYILDIEPGNTILDCLNRIKWDLDGTLSFRKNCRNTICGSCAMRINGRSSLACKENVGNEISQGFATKNPDGVPEITVAPLGNFPVIKDLIVDMSSFWDNLESVAPYVSTAGRKIPEREFLQTPAERSQLDQTGNCIMCGACYSECNAREVNSKFVGPHALAKAYRMIADSRDNDTQNRLERYNDTESGVWGCTRCYYCNEVCPMGVDPMDQITKIKQEILAKKDASSSRTIRHRKVMIDLVKKGGWIDERKFALRVVGHNGRDLKGLLGIAPLGLRMLTKGKFPLTFEPSQGTQQVGKLITRVQNVEEKVHLETK
>NZ_AP018254.1|WP_096620909.1|1502888_1503305_+|AbrB-family-transcriptional-regulator
MSEAATAPLTGKALLAKVKELSNLPRRERARQCGYYTKTKGGQERVNLTDFYDALLSARGVPLSPETPKDGRGREPTYRVSVHQNGQIVIGATYTKAMGLEPGDEFEIKLGYKHIHLIQVDSDKKLNEADVDEDEDEE
>NZ_AP018254.1|WP_096620910.1|1503703_1504234_-|thermonuclease-family-protein
MIVAIALNLSGCDRFVTKGDRVERVSDGDTIRVIDQSGNRVTVRLACIDAPEIPHSQKERDRRNSSDKNQFQWGAKAQARLEELIKQGGDRVILTTTDNDKYGRKVAEVRLPNGTFVQQVLLQEGLAKVYRPYLKTCPSRDILETSEAKAKQAKNGVWGDSKFVNPWEWRFLNKQK
>NZ_AP018254.1|WP_096620911.1|1504329_1505106_-|armadillo-type-fold-containing-protein
MAQASSSWRQITKYIPNWKLNTSKGGVKNRSYPIKLLKRFQGPGGSLGLVTFIVAMGVWDWKLLLALGVGLGTMVFAYSLQEWQWQKFWLEIRKFIYSPNRRILVAVLSGGIGTVSCYAGVSTWLELNHHWAATAMIIQGLASILILILLIWQLANTYGRDADHKVDEILQNLTASDPLKRLVAIRQVTKLVERMQVDGDTRQTIIDCLHLLLTQERETVVRETALTSLEIIAPVSDSPNSPTPLKPLKIPHKQQISL
>NZ_AP018254.1|WP_096620912.1|1505210_1505777_-|hypothetical-protein
MLKQGSLDIPILENRQLSSLAKDKLGFTGKNHDICSHPELTDSDNFEYICLNLETLRCFEVVTQQYADVGVIFENCIAIHPSNPAFPTASGNIVLLAAPNCGLIQVNFLQPVKIVKAFVTSSQRLEMSAYNRDRQLVDRSILVGANLANSNSSVPPNMLVQVQAAEIHAVTFSVLNGQFTVDDFSFCR
>NZ_AP018254.1|WP_096620913.1|1506794_1508198_-|amidohydrolase
MNYTIKNALTTVDNRYLHQDLIISHQQISAIGTDLEPVGTVIDATNKLLLPGFINAHTHSSEMWQRGIMSMYPLELWLAELYDFAPLDLSQVYLSALGTAVETLLSGGTSVVDHLVLIPGKELETIATAVRAYQEVGIRAFIAPLIQDESITAGIPSGNTSQNHEPYFRSTQATLDIIETAVQQFHNPVNGVSILVAPTGIQLCTDALFTGCIELSQKYDLCRHSHLLETKAQEKLAQEKYGCTAVEHLQRIGYLDYRTSLAHCVHLSDRDIEILAATKSTVVHNPLSNLRLGSGIAPILKYRKAGVNISFGCDGASSNDSQDLLEAIKIGSILHNVTDMDYRNWITPYDAVQIAAQGGAIGLNMGNYIGTLDIGKQADLVTYDLTNLSLLPRTDPIGLLVLGRPSLAVDSVWVNGKQVVSHGQVTTIDVDELRQALFNHSQWQTMRQSQTAMELEPHYRFVMGLSN
>NZ_AP018254.1|WP_096625948.1|1508347_1509127_+|cysteine-hydrolase
MNLPLRKLGISPNAWTVNQAIADITRPPLEPHPVTLMTETKQLRMDLAKTAILVIDMQNDFCHPDGWLSHIGVDVTPARQPIQPLQKLLPILRGVNVPVIWVNWGNRPDLRNLSAATLHVYNPTGAGVGVGDRLPKNNAPVLIKNSWAAAIVDELEAKPEDIYVDKYRMSGFWDTPLDSILRNLGRTTLLFAGVNADQCVMTTLQDANFLGYDCILIKDCTATTSPEYCLQATFYNVNQCFGFMTNSDEIYRSLQTKST
>NZ_AP018254.1|WP_096620914.1|1509628_1510072_+|cupin-domain-containing-protein
MSLKSCVIPIVKSPKDYQAFRISPHDTNRLAIVFDSSSANTSLTCCVEIFDIGGQTPPNRHQWAVEMFFVIKGEGMAICDGKKVEIKTGDSLLVPPTGTHLIKNTGNSRLYTLTIMVPNEDFSELIRSGTPVELDAEDMLVLNGLSH
>NZ_AP018254.1|WP_096620915.1|1510489_1511815_-|dihydroorotase
MSSLVNLLIRHAHVVLPDSNLIFADVLIRDRLIAEVAPVISPPADTLVIDATGLTLLPGVIDPQVHFREPGLEYKEDLFTATCACAKGGVTSFLEMPNTRPLTTTQATLDDKLQRAAQKCLVNYGFFIGATKEVLPDLNTAHPVCGIKIFMGSMHGPLLVNETEVLERIFASGTRLIAVHAENQQRIDQRRQEFAHIHDPSIHSQIQDNQAALEATQLALSLSKKYQRRLHILHMSTAEEAELLRQDKPAWVTAEVTPQHLLLNTSAYAKIGTLAQMNPPLRSPHDNQVLWQALRDGIIDFIATDHAPHTLAEKSQEYPNTPSGMPGVETSLALMLTAAQQGHCTVPQVVNWMSTAVAQAYRIPNKGAIAPGYDADLVLVDLENYRPVLREEIVSKCGWSPFEGWNLTGWPVYTIVGGEIVYEKGKINTHVRGQALRFDAA

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Crispr_ID: NZ_AP018254_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_15

1576022-1576126

Orphan

Consensus_repeat	Method
AATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_15

>merge|NZ_AP018254|15|1576022-1576126|CRISPRCasFinder
AATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTACGTAGACGCATAGCGACTTGCCATAGGCTATTACAAATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTA

>NZ_AP018254|15|15|1576022-1576126|CRISPRCasFinder
AATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTA	CGTAGACGCATAGCGACTTGCCATAGGCTATTACA
AATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096620971.1\|1585058_1586903_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_AP018254.1\|WP_096620966.1\|1579629_1581525_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_AP018254.1\|WP_096620956.1\|1565771_1566266_+\|Photosystem-I-reaction-center-subunit-III	unknown	unknown	gnl\|CDD\|177054
NZ_AP018254.1\|WP_096620973.1\|1588985_1589381_-\|response-regulator	unknown	unknown	gnl\|CDD\|381100
NZ_AP018254.1\|WP_096620969.1\|1582471_1583833_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_AP018254.1\|WP_096620965.1\|1578470_1579397_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_AP018254.1\|WP_096620959.1\|1568843_1569110_-\|DUF370-domain-containing-protein	unknown	unknown	gnl\|CDD\|179823
NZ_AP018254.1\|WP_096620960.1\|1569897_1572240_-\|DUF3488-domain-containing-protein	unknown	unknown	gnl\|CDD\|224224
NZ_AP018254.1\|WP_157780666.1\|1581930_1582134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625954.1\|1578243_1578441_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620964.1\|1576162_1577134_-\|solanesyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|131796
NZ_AP018254.1\|WP_096625952.1\|1566374_1566506_+\|photosystem-I-reaction-center-subunit-IX	unknown	unknown	gnl\|CDD\|235065
NZ_AP018254.1\|WP_096620972.1\|1588014_1588875_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018254.1\|WP_096620961.1\|1572693_1573680_-\|PatU	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620955.1\|1564071_1565118_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_AP018254.1\|WP_096620963.1\|1575096_1575576_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620957.1\|1566934_1567453_+\|photosystem-I-reaction-center-protein-subunit-XI	unknown	unknown	gnl\|CDD\|367128
NZ_AP018254.1\|WP_096620962.1\|1573672_1574863_-\|heterocyst-differentiation-protein-HetZ	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620958.1\|1567909_1568617_-\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_AP018254.1\|WP_096620970.1\|1584082_1584814_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620971.1\|1585058_1586903_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	5.09058e-64
NZ_AP018254.1\|WP_096620966.1\|1579629_1581525_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	5.17736e-73
NZ_AP018254.1\|WP_096620956.1\|1565771_1566266_+\|Photosystem-I-reaction-center-subunit-III	gnl\|CDD\|177054	CHL00132, psaF, photosystem I subunit III; Validated.	1.63528e-65
NZ_AP018254.1\|WP_096620973.1\|1588985_1589381_-\|response-regulator	gnl\|CDD\|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	8.28351e-34
NZ_AP018254.1\|WP_096620969.1\|1582471_1583833_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.22933e-98
NZ_AP018254.1\|WP_096620965.1\|1578470_1579397_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	1.26163e-131
NZ_AP018254.1\|WP_096620959.1\|1568843_1569110_-\|DUF370-domain-containing-protein	gnl\|CDD\|179823	PRK04323, PRK04323, hypothetical protein; Provisional.	1.1591e-48
NZ_AP018254.1\|WP_096620960.1\|1569897_1572240_-\|DUF3488-domain-containing-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	1.46117e-27
NZ_AP018254.1\|WP_096620964.1\|1576162_1577134_-\|solanesyl-diphosphate-synthase	gnl\|CDD\|131796	TIGR02749, Prenyl_transferase, solanesyl diphosphate synthase. Members of this family all are from cyanobacteria or plastid-containing eukaryotes. A member from Arabidopsis (where both plastoquinone and ubiquinone contain the C(45) prenyl moiety) was characterized by heterologous expression as a solanesyl diphosphate synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_AP018254.1\|WP_096625952.1\|1566374_1566506_+\|photosystem-I-reaction-center-subunit-IX	gnl\|CDD\|235065	PRK02733, PRK02733, photosystem I reaction center subunit IX; Provisional.	4.24927e-14
NZ_AP018254.1\|WP_096620972.1\|1588014_1588875_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	9.00948e-18
NZ_AP018254.1\|WP_096620955.1\|1564071_1565118_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
NZ_AP018254.1\|WP_096620957.1\|1566934_1567453_+\|photosystem-I-reaction-center-protein-subunit-XI	gnl\|CDD\|367128	pfam02605, PsaL, Photosystem I reaction centre subunit XI. This family consists of the photosystem I reaction centre subunit XI, PsaL, from plants and bacteria. PsaL is one of the smaller subunits in photosystem I with only two transmembrane alpha helices and interacts closely with PsaI.	1.99714e-76
NZ_AP018254.1\|WP_096620958.1\|1567909_1568617_-\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	2.17666e-115
NZ_AP018254.1\|WP_096620970.1\|1584082_1584814_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.74857e-28

>NZ_AP018254.1|WP_096620963.1|1575096_1575576_+|hypothetical-protein
MDLQAQIQSLVDNAPQDGVTPQLMIAIAPVLQAIAQPLRHLQYYILQDMDHHWIVTTLSNRTNPNLEKRVIYAFPTLQDVSTNTDAGLDPQVIAAPIPVIHLLFQLVALEPVDSIVFFETPGTMSNAVEIPRHQLQSQIQGFLHTQQKPNSSPIPPDIA
>NZ_AP018254.1|WP_096620962.1|1573672_1574863_-|heterocyst-differentiation-protein-HetZ
MNLAATTTIQGDNSIGVEAIFEFLYQELRQSTKASEQNCRDVAMRITTEVYRICSESKRIQASGAIASSAMSLARHRLQQCLRYYNLGSHRGRVELHSTLSAIIYRYINPPQRQLSYQGRLTIIEDFLQSFYLEALNAFRRENQMGATYQPQTQLQLSEYMAFTERYGKRRIPLPGRQQQLIILRAQTFSQQQPPETCVDIEQAAEGSTSEADGNWEDPAVQQLRSAMATQPEPEPQEETLRSVVIEELMNYLEERQQNDCADYFALRLQDLSAQEIESVLGLTSRQRDYLQQRFKYHLIRFALLHRWELVHEWLEADLNMNLGLTPQQWDVFIAGLDDKQRGLLELKQQGHTDEKIARTLGLSTAQLQKRWFKILEQAWEIRNSLMSGSGASTHE
>NZ_AP018254.1|WP_096620961.1|1572693_1573680_-|PatU
MNSNSESLQNQLLRWLLAENAETLENTVEDCKENYGVNQQATDGTGVTHDIGSLSSADSLPPTFQLGEIPTVQERFQAVLKRRLKIQIENHPPLFPWESQLVDYPEYVDNPAVVLNPGWNWSFQQSLLNLPTNLPERVFQQLLAKCQGLIASSIPLGAKLVQAVEVLFPNEPQALNELAGMVLRTPYRSVDTLASLPILEQDYEQLQERQQMALSLIAAKQLLENLTLEISATQPVIERRWLTSAGMLNLRVESTGPDGARALRVRGDLPCSGTITVRDQTSGAVAQATGAGSLSLELTASSPQQAWILELSLDECIQPPLTLVINAV
>NZ_AP018254.1|WP_096620960.1|1569897_1572240_-|DUF3488-domain-containing-protein
MSKIIEISRHWRLLWAGGSGVDPSSRTPVGQVEDSRRLRVLVLALVVVGVIAVDVAAETGFSFWSAPLNTVGAIWSYQRRRSRNVAIKFAIAIGMLLALGAFFGQLLGNARNGGDTRLILAELLIQLQVLHSFDMPRRKDLGYSIVIGVILLGVAATLSQTLAFAPVLLVFLAVALPTLVMDYRSRLGVRPDPLIRQGRGLRVGKSSLPSYFGLFSLVLAIGLGIFAVLPRFPGYQLRMFPVSSPVEIRGDFTGRTIINPGYSRAARNGTGEGEDGQGSGGNGSGGLDSTSYYGFNSSINQNRRGQMTPKVLMRVRSQVEGFWRVLAFDRYTGQGWEISRNDQVNTIRRPPWSYQLTIPPLEMRGKTQEVIQTYSVVATMPNLVPAMSIPREIYFPAPAIAVDPEGGLRAPVQLGDGFTYTVVSDVPYRDRTLLGQAGNNYPPGILSHYLQVPPAIAEQVRNHTEKILADYNRNRVGNEIKPLTSNYEKALYLAQYLKQSYQLPDNPDDLPLLGEDEDLVTAFLFKNRGGYPDHFSTTLTIMLRSIGIPARLVAGFAPGEFNPFTGLYIVRNTDAYAMTEVYFPNYGWFTFDPIPGHPLIPPSVEETQTFTVLQKFWKWVAGWLPSPVTGFLNHLFASIFGNLARFIAWLIALFTQGWLGLITGLTVMTGFAFSVWLIYQQWHQLRVKAAMGKLPPMERLYQYMLRWGGEQGFSKHPAQTPLEYAQVVSANSPPETGAMITEICHAYVSWRYGQKPPEMEKLRDRWREFTTQQNTKMKRQ
>NZ_AP018254.1|WP_096620959.1|1568843_1569110_-|DUF370-domain-containing-protein
MDIQLINIGFGNIVSANRVVAIVSPESAPIKRIITDARDRGQLVDATYGRRTRAVIITDSSHVILSAIQPETVANRFVIAREHHVVDN
>NZ_AP018254.1|WP_096620958.1|1567909_1568617_-|guanylate-kinase
MMQVISVANSDTSKLCTSQGRLIVLTGPSGVGKGTLMRLLLQRHPDLYYSVSATTRAPREGEIDGQHYHFISRAQFEKLVARGEFLEWAEFAGNYYGTPKTPVQNQVDAGKNVLLEIELEGARQVRKSFPQAFSIFILPPSIAELEKRIRGRGQDSPEAIAKRMHRAIEEISAADEFDLKIVNDDLEKALSAIESALFEESAITSNANPRTKHTHQVVCVNDSGFIQHHEQSVSS
>NZ_AP018254.1|WP_096620957.1|1566934_1567453_+|photosystem-I-reaction-center-protein-subunit-XI
MVQSVDASKNLASDPRNREVVRAAGRDPQQGNLETPINSSALTTWYINNLPAYRPGLTPFRRGLEIGMAHGYLLFGPFAKLGPLRNAPNANLAGMLGSIGLVVILTACLSLYANSNPGKPFASVTVPNPPDSFNTKEGWNNFASAFLIGGIGGAIVAYFLTSNLGFLQSIGG
>NZ_AP018254.1|WP_096625952.1|1566374_1566506_+|photosystem-I-reaction-center-subunit-IX
MEQQHLLKYLSTAPVLIFALLIFTAGLLIEFNRFFPDLLFHPL
>NZ_AP018254.1|WP_096620956.1|1565771_1566266_+|Photosystem-I-reaction-center-subunit-III
MRRLFALILAICLWFNFAPPTLALGADLVPCKDSPAFQERAKTARDTTSDPQSGEKRFARYSQALCGPEGLPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLIAIRKQKDTELKEIIIDVPLAFSMMLSGFAWPAAAVKEFLSGELTAPDTEIPISPR
>NZ_AP018254.1|WP_096620955.1|1564071_1565118_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MATILAIETSCDETAVAIVRDRHVCSSVITSQIDTHRPYGGVVPEVASRQHLEIINWEIDQAVEQAELGWDSIDGVAATCAPGLVGALLVGLTAAKSLAVVHQKPFLGVHHLEGHIYASYLSEPELQPPFLSLLVSGGHTSLIHVKSCGVYESIGETRDDAAGEAFDKVARLLNLGYPGGPVIDKLAAMGNPQAYPLPEGRVSLPTGGYHPYDASFSGLKTAVLRLVQKLEQTEEKNSLPIADIAASFQDTIVRALTKRAIAAALDLGLDTIAVGGGVAANRGLRQHLTATGNQHNLRVLFPPLKFCTDNAAMIGCAAADHFHHGHVSDLKLGVNSRLSLARVMDLYV
>NZ_AP018254.1|WP_096620964.1|1576162_1577134_-|solanesyl-diphosphate-synthase
MTPATSLFSPVEADLRMLAENLKQLVGNGHPILSAAAEHLFGSGGKRIRPAIVLLISRATMLERGISQRHRRLAEITEMIHTASLVHDDVVDEAELRRGIPTVHSLFGNRIAILAGDFLFAQASWYLANLDNLEVVKLLSQVIMDLAAGEIQQGLNRFDTSLSMEAYLEKSYYKTATLFANSAKAAGILSEVSPSMAEHLYDYGRHLGLAFQIVDDILDFTSSADTLGKPAGSDLRSGNLTAPVLFALEEKPCLDVLIEREFAQAGDLEQALEIINDSQGISKARDLAAHHAKLAIEHLADLPVSDSRYSLINLADYVISRLY
>NZ_AP018254.1|WP_096625954.1|1578243_1578441_+|hypothetical-protein
MVGGKMPMMTFILASGYLFVVYLLLALAKRGTSKIPPRQTQSISSDELAAEVSMNGNITEIVSGQ
>NZ_AP018254.1|WP_096620965.1|1578470_1579397_-|glutamate-racemase
MLPSAIFEANLQTFAREPQRAPIGVFDSGVGGLTVLRELYRQLPHESIIYLGDTARLPYGIRTPAEICQFNREILTWMQAQGVKMTIMACNTSSALALDTVRQEFNFPILGVILPGARAAVQAGSRIGVIATPATAKSNAYKQAIQEINPDIQVWQVGCPEFVPLIEQNRIHDPYTLAVARSYLEPLLEAEIDTLVYGCTHYPHLEPILRSLLPERVRLVNPAQHVVSACTQELELLGLRNNYPPMPTRFVVSGCPQEFAQSAFNWLGHTPTVESIQFPHVISPTTHPDMQLAVNGQSSTATTDISPS
>NZ_AP018254.1|WP_096620966.1|1579629_1581525_-|N-acetylmuramoyl-L-alanine-amidase
MKIHWLLPGSLIIVPVFMLASPAQAARLQSWRFDPNTNQLEIRTEGAVQPQAQLVFNPTRLVIDLPGINFGRPQTQQTLSGSFRAVRVGQFDPSTARIVVEVAPGYTLDPQQVQFEGRTTSYWIVKLPSPQRQTGNSSNNPETIYGVVNRDRPPSAGNSSNNPTSSTRPIASGVRGATQVDDLRITGDGLFVRTSGTGNPLLRVNRSSDRRTINIDVTNASISPNLGNPEINVNRFGVSQVRFTELESNPPIVRISLNVDRDAPNWQASRSGNNGIILLPDRLGSISNERPSNPSDSTPNPSPREGIATIESIDFNATANQLLIRANKGVRATSGWDRSSAMFQVTIPNAKLAPSVRGPQLDGNSPVLRVRLQELKDSQSVVVLVQPAARVQIGQLNQLSGQLLALELRRDSSPITPPVVLPPLPRPNPAPTPEIPDRPTLPNPTPVPRPTPNSRPVVFIDPGHGGQDPGAIGIGGLREKDVILPISQRIAQVLEQNGIQVVMARNADYFVSLQGRVDMAEQARASVFVSIHANSAGASRPDVNGLETYYYESGLRLAQVVHASILRSVDVPDRKVRKARFYVLRRSSMPSILVETGFVTGAGDAARLRNPVFQRQMGEAIARGILQYLGR
>NZ_AP018254.1|WP_157780666.1|1581930_1582134_+|hypothetical-protein
MRYTPKLGKINGDDNSILLAIATLNFTLGKGISKLSTIQIPENVVNELCVNESTCSSKVTFPVDDNL
>NZ_AP018254.1|WP_096620969.1|1582471_1583833_-|ABC-transporter-substrate-binding-protein
MKQNHLIDIRRYISTLLTKQWRHIRTKLRLIILFGLSLVIIAGCQSSSQISNSKVIKLTFWHGVNPPPNRDVVNKLIDKFNQTHPDIFVESLYVGQQDQQMPKILAAVVGNAPPDLLWYNPTIGGQLVELNALIPLDEMLAKSPVKSEIDPALFESMTYQGKIWSVPFATNNVGIFYRPSLFQAAGIQELPKIWSEFREVAKKLTRDLDGDGRIDQHGMFLPLGKGEFTVFTWLPFLWSGGGELVPENINTAAGVQLENNQGAIAALEFWRNLINDGSVQLSGPERGYETDAFVAGKVAMQITGPWTLGEMQSQGIDFGVFPIPMDKRPATSIGGENLYLFKTNPQRQQAAFTFAEYTLSQEFQTELALGTGYLPINLKARENPKYIEFTQKQPAVKVFLQQAQYGRSRPIFPGYNRVSENIGRAIESVILGKTTPSQALKASQQRLDLIFQS
>NZ_AP018254.1|WP_096620970.1|1584082_1584814_-|ROK-family-protein
MTESNNIRTLSVDIGGSGVKVMILNQQGNPISDRLRVNTPSVGTPTSIIAEIVNLAAQAGEFERVSVGFPGVVRSGVTETAANLHPEWIGFDLATSLTQHLNKPVRVINDADMQGLGAIAGRGVELVITLGTGFGSALFIDGKLVPNLEMGHHPFRKGETYEEQLGRSTLEDIGEKKWNNRVKKAIASLQHLFNYDYLYIGGGEAKRINLNLPPNIKLIPNVTGLLGGIALWYDWQHIPQIKI
>NZ_AP018254.1|WP_096620971.1|1585058_1586903_-|TolC-family-protein
MTKNFMNLYRFLLHSSWVAIAITIFFPASARSEENSRPSWLQQQRAILNHNKSKLLAQASGSAADLIVSPRGLSTQTNGVFSTQPVIKSPSPPTPLAQVHSSETSGRSMEFVRPDSDDTNNSEQNIYKYIRNDTTPSKNLPKHSDSQLPNYPPEGIPPQSPASGFPQPSINSDPGKTSPAVIPVKNQSPEHPPTPHPPKTELQSLTLEQALEIAKQNNPEFQSALLRVKRSQAVLREAQAEWYPKVNINGVIENTRSASDQLAVEKGVAPPNTDEAVTQFTGQAELRYSIFTSGRRSATVREAEERLRVDKLDVEAKYQTLRLNTTLRYYDLQAADEQVRISKSAVENAQASLRDAQALEQAGVGTRFDVLRSQVNLANAQQDVTNALSQQSIARRRLATLLSLPSNVNIVTAEPVKIAGLWDAPLEPTIIQAFERRSELQQRLAERNIAQQRRRQALSAKGPQVDFVATYDLLDQYNDDISVTDGYSIGVRASLNLYDGGAAKARANQAKTDMAIAETNFASQRDQIRFEVEQFYSQLQSSQENVQTATLALEQAKEALRLARLRFQAGVGTQTDVISAENDLTRAEGNRITAILDYNRAFANLERAVGTVSK
>NZ_AP018254.1|WP_096620972.1|1588014_1588875_+|tetratricopeptide-repeat-protein
MLKKLSFVRLLVICSVWWTIPNPVLAQALLPHTLQLDTAKLEKQGLSLAQEAASLAQFQQYELALPRARLAVQLAPNNDRVWFLLGSIHMQTKDFTNALSALQRAQTLNPKNHQVQFALGSLHFQQEKYQTALTYYQAGLRLQPNDANGLFDLGNTYYMLNRYQDAIAQYRKSIAQNAKFWPAINNIGLVLYEQGDIQGAIKKWQESIAIDKRAAEPMLALAVANYIKGDRQQSIVMGEQALKIDARYGDLDFLKQNLWGQKLLGHAKQFLSLPRIQAALEAGNRQ
>NZ_AP018254.1|WP_096620973.1|1588985_1589381_-|response-regulator
MKTVLIVEDDLINARVFSKILTKRGGLNVKHTENVDEVMEIAHSGGADIILMDVSLSRSVYQGKQVDGIKITQILKADPQTASLPIILVTAHAMEGDRENFLQQSGADGYISKPVVDHQQFVDQIKALLDE

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Crispr_ID: NZ_AP018254_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_16

1620356-1620466

Orphan

Consensus_repeat	Method
GTTTCCAACTAATCCAATTTAACCCAATCGGTAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_16

>merge|NZ_AP018254|16|1620356-1620466|CRISPRCasFinder
GTTTCCAACTAATCCAATTTAACCCAATCGGTAGGGTGCAATTATGCAGTTCGCCTACTCATTATCCGTGAAATCGTTTCCAACTAATCCGATTTAACCCAATCGGTAGGG

>NZ_AP018254|16|16|1620356-1620466|CRISPRCasFinder
GTTTCCAACTAATCCAATTTAACCCAATCGGTAGGG	TGCAATTATGCAGTTCGCCTACTCATTATCCGTGAAATC
GTTTCCAACTAATCCGATTTAACCCAATCGGTAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621005.1\|1630996_1631749_+\|transferase	unknown	unknown	gnl\|CDD\|100050
NZ_AP018254.1\|WP_096621001.1\|1624639_1626496_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	unknown	unknown	gnl\|CDD\|236008
NZ_AP018254.1\|WP_096620993.1\|1615480_1615690_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373064
NZ_AP018254.1\|WP_096620998.1\|1620726_1621593_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|179469
NZ_AP018254.1\|WP_096620992.1\|1614789_1615284_+\|bleomycin-hydrolase	unknown	unknown	gnl\|CDD\|271302
NZ_AP018254.1\|WP_096620994.1\|1615710_1617057_-\|proton-extrusion-protein-PcxA	unknown	unknown	gnl\|CDD\|235046
NZ_AP018254.1\|WP_096621004.1\|1628984_1630700_+\|ribulose-bisphosphate-carboxylase-small-subunit	unknown	unknown	gnl\|CDD\|100039
NZ_AP018254.1\|WP_096620989.1\|1611570_1613019_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_AP018254.1\|WP_010995042.1\|1627323_1627632_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132897
NZ_AP018254.1\|WP_096620990.1\|1613086_1613650_+\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|225145
NZ_AP018254.1\|WP_096621000.1\|1623022_1624501_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235810
NZ_AP018254.1\|WP_096621003.1\|1628207_1628510_+\|EutN/CcmL-family-microcompartment-protein	unknown	unknown	gnl\|CDD\|226942
NZ_AP018254.1\|WP_096620991.1\|1614139_1614673_+\|bleomycin-hydrolase	unknown	unknown	gnl\|CDD\|271300
NZ_AP018254.1\|WP_096620995.1\|1617198_1617426_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621006.1\|1631790_1632573_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|226943
NZ_AP018254.1\|WP_096620996.1\|1617663_1619835_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620987.1\|1610090_1610777_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_AP018254.1\|WP_096621002.1\|1627846_1628191_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132897
NZ_AP018254.1\|WP_096620988.1\|1610879_1611473_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|368581
NZ_AP018254.1\|WP_096620999.1\|1621755_1622886_-\|CO2-hydration-protein	unknown	unknown	gnl\|CDD\|370890

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621001.1\|1624639_1626496_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	gnl\|CDD\|236008	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated.	0
NZ_AP018254.1\|WP_096620993.1\|1615480_1615690_+\|hypothetical-protein	gnl\|CDD\|373064	pfam14430, Imm1, Immunity protein Imm1. A predicted immunity protein, with an alpha+beta fold and a conserved C-terminal tryptophan residue. The protein is present in a wide range of bacteria in polymorphic toxin systems as an immediate gene neighbor of the toxin gene.	0.00743074
NZ_AP018254.1\|WP_096620998.1\|1620726_1621593_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|179469	PRK02755, truB, tRNA pseudouridine synthase B; Provisional.	1.78727e-162
NZ_AP018254.1\|WP_096620992.1\|1614789_1615284_+\|bleomycin-hydrolase	gnl\|CDD\|271302	cd14769, PE_alpha, Phycoerythrin alpha subunit, a phycobilisome rod component. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	5.73899e-99
NZ_AP018254.1\|WP_096620994.1\|1615710_1617057_-\|proton-extrusion-protein-PcxA	gnl\|CDD\|235046	PRK02507, PRK02507, proton extrusion protein PcxA; Provisional.	0
NZ_AP018254.1\|WP_096621004.1\|1628984_1630700_+\|ribulose-bisphosphate-carboxylase-small-subunit	gnl\|CDD\|100039	cd00710, LbH_gamma_CA, Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.	9.28246e-91
NZ_AP018254.1\|WP_096620989.1\|1611570_1613019_-\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	4.64583e-144
NZ_AP018254.1\|WP_010995042.1\|1627323_1627632_+\|BMC-domain-containing-protein	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	2.51453e-43
NZ_AP018254.1\|WP_096620987.1\|1610090_1610777_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	2.45391e-30
NZ_AP018254.1\|WP_096621000.1\|1623022_1624501_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235810	PRK06473, PRK06473, NADH-quinone oxidoreductase subunit M.	0
NZ_AP018254.1\|WP_096621003.1\|1628207_1628510_+\|EutN/CcmL-family-microcompartment-protein	gnl\|CDD\|226942	COG4576, CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	1.11054e-40
NZ_AP018254.1\|WP_096620991.1\|1614139_1614673_+\|bleomycin-hydrolase	gnl\|CDD\|271300	cd14767, PE_beta-like, Phycoerythrin beta subunit, a component of the phycobilisome rod; and related proteins. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC). This subfamily also includes the beta subunits of Cryptophyte phycobiliproteins which represent another type of biliprotein antenna with different structure and organization. The beta subunits of cryptophyte PBPs share a high degree of sequence identity with both the alpha and beta subunits of the cyanobacterial and red algal PBPs, however the alpha cryptophyte subunits are shorter, and unrelated. There is only one type of PBP present in a single species, either phycocyanin or phycoerythrin, but not allophycocyanin. Structurally, phycoerythrin in cryptophytes is an alpha1alpha2betabeta dimer and not a trimer as in the PBS.	2.18242e-95
NZ_AP018254.1\|WP_096621002.1\|1627846_1628191_+\|BMC-domain-containing-protein	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	2.18567e-46
NZ_AP018254.1\|WP_096621006.1\|1631790_1632573_+\|BMC-domain-containing-protein	gnl\|CDD\|226943	COG4577, CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	3.50928e-41
NZ_AP018254.1\|WP_096621005.1\|1630996_1631749_+\|transferase	gnl\|CDD\|100050	cd03360, LbH_AT_putative, Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.	2.1448e-10
NZ_AP018254.1\|WP_096620990.1\|1613086_1613650_+\|phosphoribosyltransferase	gnl\|CDD\|225145	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only].	7.69214e-33
NZ_AP018254.1\|WP_096620988.1\|1610879_1611473_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|368581	pfam05724, TPMT, Thiopurine S-methyltransferase (TPMT). This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyzes S-methylation of aromatic and heterocyclic sulfhydryl compounds, including anticancer and immunosuppressive thiopurines.	1.69783e-31
NZ_AP018254.1\|WP_096620999.1\|1621755_1622886_-\|CO2-hydration-protein	gnl\|CDD\|370890	pfam10216, ChpXY, CO2 hydration protein (ChpXY). This small family of proteins includes paralogues ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations.	0

>NZ_AP018254.1|WP_096620996.1|1617663_1619835_+|hypothetical-protein
MIANSLWITGPSRSGKTTRLVEIICDWTNKYSRHREPLYSSNYGHQGNLYANEKGILVLAANDDNRRVLADRIAIATQGRFPIRVKTALGFFQDEVILFWPLLLQELHLKGQFPVRLRPETEQELATKLWRTHLNETMIREVGVNEYRLVRRILDILQLAALAGVESEQIGEIMEQALPREGTVKFIPPELLSTLLQDWQNWCLQRGFLTYGIICGLYRHHLLPHPEYQQRLLQRYQGLVADDVGDYPAIARSLFTAFLQTGKPSIFTYNPDSNIRWGLGADPDYLEELAADCQVEILTPQPFSSLSPPLTSSILELLSDGMTLSTLPDNIQSIQTTSRSQLLRETAEHIIHHIKSGAIAPVEIAIIAPGLDAIARYTLMEILAKQNIPVQPINDQRPLIANPTIRGLLTLLALVYPGLGRLIDRDAVAEMLVVLSNVSKDIVDSEIADTSEPKPKPGIDPVRAGLIADNCFQPHPDTPRLLPITSFERWDRLGYAATTTYNAILAWIDNQRQQYAHKTLLNPIFLLDRAIQDFLWNGSNLPYQQLAALRELLETAQHYWEIDTRLRQYSPSENIRNDSTLSEFIQLLRRGTITANPYPVNPIGRNAKAITLASIFQYRSQRRVHRWHYWLDVGSPLWAKGGAATLFGAPFFLQHRLGNPWTTEDEARTESLRVQTIITDLLARVQERVYLCHSELAVNGQEQLGPLSPLVHACIGSTIGFES
>NZ_AP018254.1|WP_096620995.1|1617198_1617426_+|hypothetical-protein
MDDSSLITYFWDLPRISHKTLKLMGIVRRRKINPLLKAYNLLVRNPGYALVTIKQDFEIATLQEVASRLPLVAMT
>NZ_AP018254.1|WP_096620994.1|1615710_1617057_-|proton-extrusion-protein-PcxA
MSNLSLWQRTYNYLVLLYKWYLRTPERSLETAYQAALSIKKIEEEYFNGGIITTYSSQYSSLDNYFTTELNKQLKIVRMRLTEFNSSRTFLRESDYNRAPKYGVTLLSSTVILEKLQFIDSVIGKYINYDDNLASVSIPTNSPQPSSNIVSSNPQTDESPIPNQSKSLQYLARRNKGGENRSKANTTGILPRSILSTVSRIQVELDPDAEKDVLQNFRKAQRRTIISVRFILLLIIIPVLTHQLSKAFVIGPIVNYFHPVTTSNAFINNEMEEKAFAELAQYEEHLRFQAMIGNAPVLSESEREEKLQAKAKEIAYAFSRESSNAIKNVFADICSMIALVIFLLSSQPQIAVLKDFFDHVVYGLSDSAKAFIIILFTDIFVGFHSPHGWEVILEGISRHWGLPANHEFIFLFIATFPVILDTIFKYWIFRYLNRVSPSAVATYRNMNE
>NZ_AP018254.1|WP_096620993.1|1615480_1615690_+|hypothetical-protein
MEIFLFLRIADSAKSQQIDTLVAGGQKGNYPANQCVDLLHCLLAARMFTEAGKLDDLLTWEEDKLLASV
>NZ_AP018254.1|WP_096620992.1|1614789_1615284_+|bleomycin-hydrolase
MKSVITTVVAAADAAGRFPSTSDLESVQGSIQRANARLEAAEKLANGIDAVAKEAFDACFKKYSYLNNEGEAGENQAKKDKCLRDFKHYLRLIQYCLIVGGTGPLDEWGIAGAREVYRSLNLPTAPYVAGLQFTRDRACAPRDMSPQALLEFRALLDYAINSLS
>NZ_AP018254.1|WP_096620991.1|1614139_1614673_+|bleomycin-hydrolase
MLDAFSRAVITADTKTSCIGGSELAALKSFVAEGNKRLDAVNCVASNASCIVSDSVSGMICENQGLVQAGGNCYPTRRMAACLRDGEIILRYVCYALLAGDASVLDDRCLNGLKETYTALGVPGTSAVRAVQIMKACAVAHINNTATKRKMDTPQGDCSALAAECASYFDRVIAALS
>NZ_AP018254.1|WP_096620990.1|1613086_1613650_+|phosphoribosyltransferase
MADLYVSWSDYHQKIEKLAARIYASGWQFNQIVCLARGGLRIGDILSRIYHQPLAILATSSYSGAGKQERGNLKFAKHLTMTSTHLGSKILLVDDLVDSGITLQETIPWLHQYSESPIEDIRSAVIWYKSCSVIEPDYYVDYLHDNPWIHQPFEPYEMTNPADLAAKYALDDNLEMARSQYEVSRNY
>NZ_AP018254.1|WP_096620989.1|1611570_1613019_-|MFS-transporter
MNDLPSDIHQQGVNTRDKLSFWLKLAYGAGDLGPAMTANISSFFLMVFFTNVAGIPPALAGSILMVGKIWDAVNDPMVGVLTDRTQSKRWGRRLPWLLYGAVPFGITFVLQWIVPQFSTNPKINIWGLFMYYIVIGLISQVFYTVVNLPYTAMTPELTQDYDERTSLNSFRFAFSIGGSIVSLILAQVIFSLIANRQSQYVILAVVCGIIATLSLLWCVYGTRDRILAFEAQRTQNHDTTAEIPIIDQFKIAFRNRPFLFVIGIYLFSWLALQITASILPYFIVNCMELREADVPTVLIGVQGTALCMLFIWGIFSQKVGKKIVYFLGMMLWMIAAVGLYFLRPGQIGFMYVLAVLAGAGVSTAYLVPWSMMPDIIELDELQTGQRREGIFYGFMVLLQKFGLAFGLFLVGLVLEASGFQERIPGSPTIPVQPESALQAIRTVVGPIPVILLIAGCVLTYFYPITREMHAEIMMKLAQKKTG
>NZ_AP018254.1|WP_096620988.1|1610879_1611473_-|methyltransferase-domain-containing-protein
MLDSKDWNQRYLEGKTGWDIGQAAPPFTSLLQSDQRPAPGKVAVLGCGRGYDALLFAEFGFEVIGFDFAETAIESAVHLAQTHQNQAQFQQRDIFDLPGEFSNYFDYVVEHTCFCAILPPQRGEYVKVVKSILKPQGKLIGLFFTHNRPGGPPFGSTPAEIQTLFTIDFRILSFEPVTNSIPQRRGEEHLGIFQRLD
>NZ_AP018254.1|WP_096620987.1|1610090_1610777_-|HEAT-repeat-domain-containing-protein
MAIPSLEELSTQLESPNLRDRMVALAALRDVPAEDALPLIKKVLYDESLQIRAMAVFALGIKQTNESYPILVNILESDPDYSIRADAAGALGYLEDNRAFEVLNRAFYEDTSWLVRFSAAVALGNIKDPRAREALLSALDSSEVVIQQAAIAALGEIRDLSSVDAILRFAQSEDWLVRQRLAEALGNLPTPKSVSALKFLAKDSHHHVSESARISLQRLADSGYQVEE
>NZ_AP018254.1|WP_096620998.1|1620726_1621593_-|tRNA-pseudouridine(55)-synthase-TruB
MNGFINLNKPVNWTSHDCVAKVRKILRTKKVGHGGTLDPAATGVLPIAVGKATRLLQYLPGDKAYLGTIRFGVQTTTDDLEGDVIASQSCGDLSLSQIESLIGNFIGDIRQIPPSYSAIQVDGKRLYELARKGEIVEVPGRNVQVFTIDILDWRSGEYPELDIHISCGAGTYIRAIARDLGYACGQVATLAKLQRTVSSGFHLADSITLEDLQTQVDAGNFQPLPADFPLQYLPSIHLDPDFAIKWCHGQKIPYETQTEGLLRVYEKHDFLGIARVEAGLLIPKMVFV
>NZ_AP018254.1|WP_096620999.1|1621755_1622886_-|CO2-hydration-protein
MPTTKGKPKQHPLAEFVNRLQSGGALLPDSPENVTEVVGILYSYGVVLDAYSRNLIYIAENQFLVFFPFFKYFNGEFSFSKLLRHWQHDRINFEYAEYCMKAMFWHGGGGLDSYLDTKEFCDRANQVIAAKFRNNPLVLGLNQLFPNFLLEQLRVSCYYSGLGQFWRVMADIFLELSQLYDQGKIKSIPAVVDHIKAGLVKDANRPITYTVKIRNQNYDIIPKSLGLTFLPDTAVPYVEAVFFRGTPFPGTVSYNAQAYQIPPDQTRFQYGALYADPLPIGGAGIPPTLLMQDMRHFLPEYLHAIYRQTPRGEDDLRVQICMSFQKSMFCVTTAAILGLMPHPIDTQNPQEKTANEIYLQKWLDRLENSRLLAVNP
>NZ_AP018254.1|WP_096621000.1|1623022_1624501_-|NADH-quinone-oxidoreductase-subunit-M
MLSALILIPFIGALVMAILPRQWSALQVQRLALGFAIVSFVWTIGLGFMFNPSSITQQFRENLSWIDAIGLNYHLGVDGLSLPLIILNGLLTVIAVYSTDTHLHRPRFYFSLLFLLNAGVMGAFIAQDLLLFFLFYELELIPLYLLIAIWGGERRGYAATKFLIYTAISGILILASFLGLVWLSDSPSFALESLSTKYLPLSTQVLLLAGILIGFGIKIPLVPFHTWLPDAHVEASTPISVLLAGILLKLGTYGILRFGMNLLPEAWAYVAPWLAIWAVVSVLYGSSCAIAQRDMKKMVAYSSIGHMGYVLLAAAAATKLSMLGAVMQMISHGLISALLFLLVGVVYNKAGTRDLDALHGLFNPERGMPVIGSLMVLGVMASAGIPGMVGFISEFIIFRGSYASFPVMTLLSMVGTGLTAVYFLILMNRAFFGRLSPQVINLPRVSWRDRAPAIVLALLIVIFGIQPSLLIYFTEPTSTAMVVHQNAVVSNL
>NZ_AP018254.1|WP_096621001.1|1624639_1626496_-|NAD(P)H-quinone-oxidoreductase-subunit-F
MNQLLFSTSWWVPFYGLIGALLTLPWALGFIRRTGPRPAAYFNILTTFLGLIHSVLIFQFIWNDAPEALTITWFTAADWELSFALDISPVSIGASVLITGLSLLAQIYALGYMEKDWSLARFFALMGFFEAALSGLAISDSLFLSYALLEVLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALANLAGSLNYQDLYEWAQTAELSPLTSALLGLGLIAGPAGKCAQFPLHLWLDEAMEGPNPASVLRNSMVVAGGAYVLYKIEPILALSPVALTALTIMGAVTAIGATLVSLAQIDIKRALAHSTSAYMGLVFLAMGEQQGGVALMLLLTHAVAKALLFMSSGSIIYTTSSQDLTEMGGLWSRMPATTTAFVVGAAGMVTLLPLGSFWAMLSWADGLVAVSPWLLWVLVLVNGLTALNLTRVFRLIFWGEPQQKTRRAAEVPWPMALPMVSLTIITLLVPVMLQQWYLLPTWESVNITVLSCLLVSTAFGVTVGATIHLHKAWSRSRILAWRMIQDLFGYDFYVDKLYKITIVAIVSLLSKISAWSDRYLVDGLVNLVGFAAIFSGQSLKYSVSGQSQGYMLTILVGVSLLGFFISWSLGLLDNLPF
>NZ_AP018254.1|WP_010995042.1|1627323_1627632_+|BMC-domain-containing-protein
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIEAARRVNGGEVVSTHIIARPHENLEYVLPIRYTEAVEQFRT
>NZ_AP018254.1|WP_096621002.1|1627846_1628191_+|BMC-domain-containing-protein
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIESVKRVNGGQVLSTHIIARPHENLEYVLPIRYTEDVEQFRENVNAIRPFGRRS
>NZ_AP018254.1|WP_096621003.1|1628207_1628510_+|EutN/CcmL-family-microcompartment-protein
MQIAKVRGTVVSTQKDPSLRGVKLLLLQMVDEEGHVLPEYEVAADTVGAGVDEWVLISRNGAARQVLGNEQRPLDAAVVAIIDTIYVEDRLIYSKKEQYR
>NZ_AP018254.1|WP_096621004.1|1628984_1630700_+|ribulose-bisphosphate-carboxylase-small-subunit
MPGRSTAEAAPPTPWARDLTGPSIHETAFIHSFSHIIGDVRIGANVIVAPGTSIRADEGSPFFIGENTNIQDGVVIHGLEQGRVIGDDGEKYSIWVGKNTCITHMALIHGPCYVGDDCFIGFRSTVFNARVGKGCIVMMHALIQDVEIPPGKYVPSGAVIISQQQADRLPDVQAADQEFAHHVVGINQALRAGYICAADSKCIAPIRDEIAKSSTGTSNGNGFSFAFEKSDEVGMSNRLSADTVEQLRYLLEQGLKIGTEHVDARRFRTGSWQSCQPINARSLNEAIAALESCLADHSGEYVRLFGIEPKGRKRVLETIIQRPDGSNGAAATGFKAPTVSSYSTAPSYASSSSNGNGYKGGAISSETAEQIRNLLNSGYRIGTEHVDARRFRTGTWQSCQPFESNSVNDVIAALEECMLQHQGEYVRLIGIDTKAKRRVLETIIQRPDGVAAPSNGKTQSYTAPTSSNYTSTSSYGGGTATATSTRLSQEAIDHIRQLFAGGYKISAEHVDARRFRTGSWQSCGQIEVRSDRDAIAALEGFMAEYAGEYVRLIGIDPKAKRRVLELIVQRP
>NZ_AP018254.1|WP_096621005.1|1630996_1631749_+|transferase
MAVPPLRLGSRFESYISGEVIVDESAVLAPGVIIRAGANGKITIGAGVCVGMGTILQVENGIIQISPGANLGAGVLMIGAGTIGENACIGAATTLYNASVEPAQIIPPGSMLGDIGRPYSLTSSADDSVQANPQKANGKYQLPDVWEEGNAESATSGSSQHTQPEQTSTPGTSPSVRQDVDDKTPSSQPSPDLESENADPAPNLSTYTATGFSETFGTQIYGQTSVQRLLTTLFPHRQPLNKPVSDNESE
>NZ_AP018254.1|WP_096621006.1|1631790_1632573_+|BMC-domain-containing-protein
MDTHNQRSLSKTQATVTHRQTAWQDAALGLVSTVSFPAIVGTADMMLKSAGVHLIGYEKIGGGHCTAIIRGGIADVRLAVETGEQTAKDFQQFVSSLVIPRPFPNLNVILPITTRLSALTDGTSYSVLSNQAIGLVETRGFPAMVGAADAMLKAADVHLAAYEKIGAGLCTAIIRGSVANVAVAVEAGMNEAERIGELNAVMVIPRPLDELEHTLPVASVWLEEREPLRFPVNIKDAVKETETKQLPDLAKLSIKVIEEL

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Crispr_ID: NZ_AP018254_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_17

1622931-1623020

Orphan

Consensus_repeat	Method
GCTTCCCGCATAGCGGGTATTACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_17

>merge|NZ_AP018254|17|1622931-1623020|CRISPRCasFinder
GCTTCCCGCATAGCGGGTATTACGTACGCGGAGCGTTGCCGCAGGCTATTACGAATTACGTTGCTTGCTTCCCGCGTAGCGGGTATTACG

>NZ_AP018254|17|17|1622931-1623020|CRISPRCasFinder
GCTTCCCGCATAGCGGGTATTACG	TACGCGGAGCGTTGCCGCAGGCTATTACGAATTACGTTGCTT
GCTTCCCGCGTAGCGGGTATTACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621005.1\|1630996_1631749_+\|transferase	unknown	unknown	gnl\|CDD\|100050
NZ_AP018254.1\|WP_096620993.1\|1615480_1615690_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373064
NZ_AP018254.1\|WP_096620998.1\|1620726_1621593_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|179469
NZ_AP018254.1\|WP_096620999.1\|1621755_1622886_-\|CO2-hydration-protein	unknown	unknown	gnl\|CDD\|370890
NZ_AP018254.1\|WP_096620994.1\|1615710_1617057_-\|proton-extrusion-protein-PcxA	unknown	unknown	gnl\|CDD\|235046
NZ_AP018254.1\|WP_096621004.1\|1628984_1630700_+\|ribulose-bisphosphate-carboxylase-small-subunit	unknown	unknown	gnl\|CDD\|100039
NZ_AP018254.1\|WP_096620989.1\|1611570_1613019_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_AP018254.1\|WP_010995042.1\|1627323_1627632_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132897
NZ_AP018254.1\|WP_096621001.1\|1624639_1626496_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	unknown	unknown	gnl\|CDD\|236008
NZ_AP018254.1\|WP_096621000.1\|1623022_1624501_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235810
NZ_AP018254.1\|WP_096621003.1\|1628207_1628510_+\|EutN/CcmL-family-microcompartment-protein	unknown	unknown	gnl\|CDD\|226942
NZ_AP018254.1\|WP_096620991.1\|1614139_1614673_+\|bleomycin-hydrolase	unknown	unknown	gnl\|CDD\|271300
NZ_AP018254.1\|WP_096620995.1\|1617198_1617426_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621006.1\|1631790_1632573_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|226943
NZ_AP018254.1\|WP_096620996.1\|1617663_1619835_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620990.1\|1613086_1613650_+\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|225145
NZ_AP018254.1\|WP_096621002.1\|1627846_1628191_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132897
NZ_AP018254.1\|WP_096621008.1\|1634824_1636444_+\|mucoidy-inhibitor-MuiA-family-protein	unknown	unknown	gnl\|CDD\|274045
NZ_AP018254.1\|WP_096621007.1\|1633812_1634727_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176111
NZ_AP018254.1\|WP_096620992.1\|1614789_1615284_+\|bleomycin-hydrolase	unknown	unknown	gnl\|CDD\|271302

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096620993.1\|1615480_1615690_+\|hypothetical-protein	gnl\|CDD\|373064	pfam14430, Imm1, Immunity protein Imm1. A predicted immunity protein, with an alpha+beta fold and a conserved C-terminal tryptophan residue. The protein is present in a wide range of bacteria in polymorphic toxin systems as an immediate gene neighbor of the toxin gene.	0.00743074
NZ_AP018254.1\|WP_096620998.1\|1620726_1621593_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|179469	PRK02755, truB, tRNA pseudouridine synthase B; Provisional.	1.78727e-162
NZ_AP018254.1\|WP_096620992.1\|1614789_1615284_+\|bleomycin-hydrolase	gnl\|CDD\|271302	cd14769, PE_alpha, Phycoerythrin alpha subunit, a phycobilisome rod component. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	5.73899e-99
NZ_AP018254.1\|WP_096621001.1\|1624639_1626496_-\|NAD(P)H-quinone-oxidoreductase-subunit-F	gnl\|CDD\|236008	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated.	0
NZ_AP018254.1\|WP_096621004.1\|1628984_1630700_+\|ribulose-bisphosphate-carboxylase-small-subunit	gnl\|CDD\|100039	cd00710, LbH_gamma_CA, Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.	9.28246e-91
NZ_AP018254.1\|WP_096620989.1\|1611570_1613019_-\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	4.64583e-144
NZ_AP018254.1\|WP_010995042.1\|1627323_1627632_+\|BMC-domain-containing-protein	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	2.51453e-43
NZ_AP018254.1\|WP_096620994.1\|1615710_1617057_-\|proton-extrusion-protein-PcxA	gnl\|CDD\|235046	PRK02507, PRK02507, proton extrusion protein PcxA; Provisional.	0
NZ_AP018254.1\|WP_096621000.1\|1623022_1624501_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235810	PRK06473, PRK06473, NADH-quinone oxidoreductase subunit M.	0
NZ_AP018254.1\|WP_096621003.1\|1628207_1628510_+\|EutN/CcmL-family-microcompartment-protein	gnl\|CDD\|226942	COG4576, CcmL, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	1.11054e-40
NZ_AP018254.1\|WP_096620991.1\|1614139_1614673_+\|bleomycin-hydrolase	gnl\|CDD\|271300	cd14767, PE_beta-like, Phycoerythrin beta subunit, a component of the phycobilisome rod; and related proteins. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC). This subfamily also includes the beta subunits of Cryptophyte phycobiliproteins which represent another type of biliprotein antenna with different structure and organization. The beta subunits of cryptophyte PBPs share a high degree of sequence identity with both the alpha and beta subunits of the cyanobacterial and red algal PBPs, however the alpha cryptophyte subunits are shorter, and unrelated. There is only one type of PBP present in a single species, either phycocyanin or phycoerythrin, but not allophycocyanin. Structurally, phycoerythrin in cryptophytes is an alpha1alpha2betabeta dimer and not a trimer as in the PBS.	2.18242e-95
NZ_AP018254.1\|WP_096621002.1\|1627846_1628191_+\|BMC-domain-containing-protein	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	2.18567e-46
NZ_AP018254.1\|WP_096621006.1\|1631790_1632573_+\|BMC-domain-containing-protein	gnl\|CDD\|226943	COG4577, CcmK, Carbon dioxide concentrating mechanism/carboxysome shell protein [Secondary metabolites biosynthesis, transport, and catabolism / Energy production and conversion].	3.50928e-41
NZ_AP018254.1\|WP_096621005.1\|1630996_1631749_+\|transferase	gnl\|CDD\|100050	cd03360, LbH_AT_putative, Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.	2.1448e-10
NZ_AP018254.1\|WP_096620990.1\|1613086_1613650_+\|phosphoribosyltransferase	gnl\|CDD\|225145	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only].	7.69214e-33
NZ_AP018254.1\|WP_096621008.1\|1634824_1636444_+\|mucoidy-inhibitor-MuiA-family-protein	gnl\|CDD\|274045	TIGR02231, Hypothetical_protein_ZK1055.6b, conserved hypothetical protein. This family consists of proteins over 500 amino acids long in Caenorhabditis elegans and several bacteria (Pseudomonas aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans, etc.). The function is unknown.	2.92271e-161
NZ_AP018254.1\|WP_096621007.1\|1633812_1634727_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176111	cd08419, PBP2_CbbR_RubisCO_like, The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold. CbbR, a LysR-type transcriptional regulator, is required to activate expression of RubisCO, one of two unique enzymes in the Calvin-Benson-Bassham (CBB) cycle pathway. All plants, cyanobacteria, and many autotrophic bacteria use the CBB cycle to fix carbon dioxide. Thus, this cycle plays an essential role in assimilating CO2 into organic carbon on earth. The key CBB cycle enzyme is ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO), which catalyzes the actual CO2 fixation reaction. The CO2 concentration affects the expression of RubisCO genes. It has also shown that NADPH enhances the DNA-binding ability of the CbbR. RubisCO is composed of eight large (CbbL) and eight small subunits (CbbS). The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.9626e-117
NZ_AP018254.1\|WP_096620999.1\|1621755_1622886_-\|CO2-hydration-protein	gnl\|CDD\|370890	pfam10216, ChpXY, CO2 hydration protein (ChpXY). This small family of proteins includes paralogues ChpX and ChpY in Synechococcus sp. PCC7942 and other cyanobacteria, associated with distinct NAD(P)H dehydrogenase complexes. These proteins collectively enable light-dependent CO2 hydration and CO2 uptake; loss of both blocks growth at low CO2 concentrations.	0

>NZ_AP018254.1|WP_096620999.1|1621755_1622886_-|CO2-hydration-protein
MPTTKGKPKQHPLAEFVNRLQSGGALLPDSPENVTEVVGILYSYGVVLDAYSRNLIYIAENQFLVFFPFFKYFNGEFSFSKLLRHWQHDRINFEYAEYCMKAMFWHGGGGLDSYLDTKEFCDRANQVIAAKFRNNPLVLGLNQLFPNFLLEQLRVSCYYSGLGQFWRVMADIFLELSQLYDQGKIKSIPAVVDHIKAGLVKDANRPITYTVKIRNQNYDIIPKSLGLTFLPDTAVPYVEAVFFRGTPFPGTVSYNAQAYQIPPDQTRFQYGALYADPLPIGGAGIPPTLLMQDMRHFLPEYLHAIYRQTPRGEDDLRVQICMSFQKSMFCVTTAAILGLMPHPIDTQNPQEKTANEIYLQKWLDRLENSRLLAVNP
>NZ_AP018254.1|WP_096620998.1|1620726_1621593_-|tRNA-pseudouridine(55)-synthase-TruB
MNGFINLNKPVNWTSHDCVAKVRKILRTKKVGHGGTLDPAATGVLPIAVGKATRLLQYLPGDKAYLGTIRFGVQTTTDDLEGDVIASQSCGDLSLSQIESLIGNFIGDIRQIPPSYSAIQVDGKRLYELARKGEIVEVPGRNVQVFTIDILDWRSGEYPELDIHISCGAGTYIRAIARDLGYACGQVATLAKLQRTVSSGFHLADSITLEDLQTQVDAGNFQPLPADFPLQYLPSIHLDPDFAIKWCHGQKIPYETQTEGLLRVYEKHDFLGIARVEAGLLIPKMVFV
>NZ_AP018254.1|WP_096620996.1|1617663_1619835_+|hypothetical-protein
MIANSLWITGPSRSGKTTRLVEIICDWTNKYSRHREPLYSSNYGHQGNLYANEKGILVLAANDDNRRVLADRIAIATQGRFPIRVKTALGFFQDEVILFWPLLLQELHLKGQFPVRLRPETEQELATKLWRTHLNETMIREVGVNEYRLVRRILDILQLAALAGVESEQIGEIMEQALPREGTVKFIPPELLSTLLQDWQNWCLQRGFLTYGIICGLYRHHLLPHPEYQQRLLQRYQGLVADDVGDYPAIARSLFTAFLQTGKPSIFTYNPDSNIRWGLGADPDYLEELAADCQVEILTPQPFSSLSPPLTSSILELLSDGMTLSTLPDNIQSIQTTSRSQLLRETAEHIIHHIKSGAIAPVEIAIIAPGLDAIARYTLMEILAKQNIPVQPINDQRPLIANPTIRGLLTLLALVYPGLGRLIDRDAVAEMLVVLSNVSKDIVDSEIADTSEPKPKPGIDPVRAGLIADNCFQPHPDTPRLLPITSFERWDRLGYAATTTYNAILAWIDNQRQQYAHKTLLNPIFLLDRAIQDFLWNGSNLPYQQLAALRELLETAQHYWEIDTRLRQYSPSENIRNDSTLSEFIQLLRRGTITANPYPVNPIGRNAKAITLASIFQYRSQRRVHRWHYWLDVGSPLWAKGGAATLFGAPFFLQHRLGNPWTTEDEARTESLRVQTIITDLLARVQERVYLCHSELAVNGQEQLGPLSPLVHACIGSTIGFES
>NZ_AP018254.1|WP_096620995.1|1617198_1617426_+|hypothetical-protein
MDDSSLITYFWDLPRISHKTLKLMGIVRRRKINPLLKAYNLLVRNPGYALVTIKQDFEIATLQEVASRLPLVAMT
>NZ_AP018254.1|WP_096620994.1|1615710_1617057_-|proton-extrusion-protein-PcxA
MSNLSLWQRTYNYLVLLYKWYLRTPERSLETAYQAALSIKKIEEEYFNGGIITTYSSQYSSLDNYFTTELNKQLKIVRMRLTEFNSSRTFLRESDYNRAPKYGVTLLSSTVILEKLQFIDSVIGKYINYDDNLASVSIPTNSPQPSSNIVSSNPQTDESPIPNQSKSLQYLARRNKGGENRSKANTTGILPRSILSTVSRIQVELDPDAEKDVLQNFRKAQRRTIISVRFILLLIIIPVLTHQLSKAFVIGPIVNYFHPVTTSNAFINNEMEEKAFAELAQYEEHLRFQAMIGNAPVLSESEREEKLQAKAKEIAYAFSRESSNAIKNVFADICSMIALVIFLLSSQPQIAVLKDFFDHVVYGLSDSAKAFIIILFTDIFVGFHSPHGWEVILEGISRHWGLPANHEFIFLFIATFPVILDTIFKYWIFRYLNRVSPSAVATYRNMNE
>NZ_AP018254.1|WP_096620993.1|1615480_1615690_+|hypothetical-protein
MEIFLFLRIADSAKSQQIDTLVAGGQKGNYPANQCVDLLHCLLAARMFTEAGKLDDLLTWEEDKLLASV
>NZ_AP018254.1|WP_096620992.1|1614789_1615284_+|bleomycin-hydrolase
MKSVITTVVAAADAAGRFPSTSDLESVQGSIQRANARLEAAEKLANGIDAVAKEAFDACFKKYSYLNNEGEAGENQAKKDKCLRDFKHYLRLIQYCLIVGGTGPLDEWGIAGAREVYRSLNLPTAPYVAGLQFTRDRACAPRDMSPQALLEFRALLDYAINSLS
>NZ_AP018254.1|WP_096620991.1|1614139_1614673_+|bleomycin-hydrolase
MLDAFSRAVITADTKTSCIGGSELAALKSFVAEGNKRLDAVNCVASNASCIVSDSVSGMICENQGLVQAGGNCYPTRRMAACLRDGEIILRYVCYALLAGDASVLDDRCLNGLKETYTALGVPGTSAVRAVQIMKACAVAHINNTATKRKMDTPQGDCSALAAECASYFDRVIAALS
>NZ_AP018254.1|WP_096620990.1|1613086_1613650_+|phosphoribosyltransferase
MADLYVSWSDYHQKIEKLAARIYASGWQFNQIVCLARGGLRIGDILSRIYHQPLAILATSSYSGAGKQERGNLKFAKHLTMTSTHLGSKILLVDDLVDSGITLQETIPWLHQYSESPIEDIRSAVIWYKSCSVIEPDYYVDYLHDNPWIHQPFEPYEMTNPADLAAKYALDDNLEMARSQYEVSRNY
>NZ_AP018254.1|WP_096620989.1|1611570_1613019_-|MFS-transporter
MNDLPSDIHQQGVNTRDKLSFWLKLAYGAGDLGPAMTANISSFFLMVFFTNVAGIPPALAGSILMVGKIWDAVNDPMVGVLTDRTQSKRWGRRLPWLLYGAVPFGITFVLQWIVPQFSTNPKINIWGLFMYYIVIGLISQVFYTVVNLPYTAMTPELTQDYDERTSLNSFRFAFSIGGSIVSLILAQVIFSLIANRQSQYVILAVVCGIIATLSLLWCVYGTRDRILAFEAQRTQNHDTTAEIPIIDQFKIAFRNRPFLFVIGIYLFSWLALQITASILPYFIVNCMELREADVPTVLIGVQGTALCMLFIWGIFSQKVGKKIVYFLGMMLWMIAAVGLYFLRPGQIGFMYVLAVLAGAGVSTAYLVPWSMMPDIIELDELQTGQRREGIFYGFMVLLQKFGLAFGLFLVGLVLEASGFQERIPGSPTIPVQPESALQAIRTVVGPIPVILLIAGCVLTYFYPITREMHAEIMMKLAQKKTG
>NZ_AP018254.1|WP_096621000.1|1623022_1624501_-|NADH-quinone-oxidoreductase-subunit-M
MLSALILIPFIGALVMAILPRQWSALQVQRLALGFAIVSFVWTIGLGFMFNPSSITQQFRENLSWIDAIGLNYHLGVDGLSLPLIILNGLLTVIAVYSTDTHLHRPRFYFSLLFLLNAGVMGAFIAQDLLLFFLFYELELIPLYLLIAIWGGERRGYAATKFLIYTAISGILILASFLGLVWLSDSPSFALESLSTKYLPLSTQVLLLAGILIGFGIKIPLVPFHTWLPDAHVEASTPISVLLAGILLKLGTYGILRFGMNLLPEAWAYVAPWLAIWAVVSVLYGSSCAIAQRDMKKMVAYSSIGHMGYVLLAAAAATKLSMLGAVMQMISHGLISALLFLLVGVVYNKAGTRDLDALHGLFNPERGMPVIGSLMVLGVMASAGIPGMVGFISEFIIFRGSYASFPVMTLLSMVGTGLTAVYFLILMNRAFFGRLSPQVINLPRVSWRDRAPAIVLALLIVIFGIQPSLLIYFTEPTSTAMVVHQNAVVSNL
>NZ_AP018254.1|WP_096621001.1|1624639_1626496_-|NAD(P)H-quinone-oxidoreductase-subunit-F
MNQLLFSTSWWVPFYGLIGALLTLPWALGFIRRTGPRPAAYFNILTTFLGLIHSVLIFQFIWNDAPEALTITWFTAADWELSFALDISPVSIGASVLITGLSLLAQIYALGYMEKDWSLARFFALMGFFEAALSGLAISDSLFLSYALLEVLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALANLAGSLNYQDLYEWAQTAELSPLTSALLGLGLIAGPAGKCAQFPLHLWLDEAMEGPNPASVLRNSMVVAGGAYVLYKIEPILALSPVALTALTIMGAVTAIGATLVSLAQIDIKRALAHSTSAYMGLVFLAMGEQQGGVALMLLLTHAVAKALLFMSSGSIIYTTSSQDLTEMGGLWSRMPATTTAFVVGAAGMVTLLPLGSFWAMLSWADGLVAVSPWLLWVLVLVNGLTALNLTRVFRLIFWGEPQQKTRRAAEVPWPMALPMVSLTIITLLVPVMLQQWYLLPTWESVNITVLSCLLVSTAFGVTVGATIHLHKAWSRSRILAWRMIQDLFGYDFYVDKLYKITIVAIVSLLSKISAWSDRYLVDGLVNLVGFAAIFSGQSLKYSVSGQSQGYMLTILVGVSLLGFFISWSLGLLDNLPF
>NZ_AP018254.1|WP_010995042.1|1627323_1627632_+|BMC-domain-containing-protein
MPIAVGMIETKGFPAVVEAADAMVKAARVTLVGYEKIGSARVTVIVRGDVSEVQASVAAGIEAARRVNGGEVVSTHIIARPHENLEYVLPIRYTEAVEQFRT
>NZ_AP018254.1|WP_096621002.1|1627846_1628191_+|BMC-domain-containing-protein
MSIAVGMVETLGFPAVVEAADAMVKAARVTLVGYEKIGSGRVTVIVRGDVSEVQASVSAGIESVKRVNGGQVLSTHIIARPHENLEYVLPIRYTEDVEQFRENVNAIRPFGRRS
>NZ_AP018254.1|WP_096621003.1|1628207_1628510_+|EutN/CcmL-family-microcompartment-protein
MQIAKVRGTVVSTQKDPSLRGVKLLLLQMVDEEGHVLPEYEVAADTVGAGVDEWVLISRNGAARQVLGNEQRPLDAAVVAIIDTIYVEDRLIYSKKEQYR
>NZ_AP018254.1|WP_096621004.1|1628984_1630700_+|ribulose-bisphosphate-carboxylase-small-subunit
MPGRSTAEAAPPTPWARDLTGPSIHETAFIHSFSHIIGDVRIGANVIVAPGTSIRADEGSPFFIGENTNIQDGVVIHGLEQGRVIGDDGEKYSIWVGKNTCITHMALIHGPCYVGDDCFIGFRSTVFNARVGKGCIVMMHALIQDVEIPPGKYVPSGAVIISQQQADRLPDVQAADQEFAHHVVGINQALRAGYICAADSKCIAPIRDEIAKSSTGTSNGNGFSFAFEKSDEVGMSNRLSADTVEQLRYLLEQGLKIGTEHVDARRFRTGSWQSCQPINARSLNEAIAALESCLADHSGEYVRLFGIEPKGRKRVLETIIQRPDGSNGAAATGFKAPTVSSYSTAPSYASSSSNGNGYKGGAISSETAEQIRNLLNSGYRIGTEHVDARRFRTGTWQSCQPFESNSVNDVIAALEECMLQHQGEYVRLIGIDTKAKRRVLETIIQRPDGVAAPSNGKTQSYTAPTSSNYTSTSSYGGGTATATSTRLSQEAIDHIRQLFAGGYKISAEHVDARRFRTGSWQSCGQIEVRSDRDAIAALEGFMAEYAGEYVRLIGIDPKAKRRVLELIVQRP
>NZ_AP018254.1|WP_096621005.1|1630996_1631749_+|transferase
MAVPPLRLGSRFESYISGEVIVDESAVLAPGVIIRAGANGKITIGAGVCVGMGTILQVENGIIQISPGANLGAGVLMIGAGTIGENACIGAATTLYNASVEPAQIIPPGSMLGDIGRPYSLTSSADDSVQANPQKANGKYQLPDVWEEGNAESATSGSSQHTQPEQTSTPGTSPSVRQDVDDKTPSSQPSPDLESENADPAPNLSTYTATGFSETFGTQIYGQTSVQRLLTTLFPHRQPLNKPVSDNESE
>NZ_AP018254.1|WP_096621006.1|1631790_1632573_+|BMC-domain-containing-protein
MDTHNQRSLSKTQATVTHRQTAWQDAALGLVSTVSFPAIVGTADMMLKSAGVHLIGYEKIGGGHCTAIIRGGIADVRLAVETGEQTAKDFQQFVSSLVIPRPFPNLNVILPITTRLSALTDGTSYSVLSNQAIGLVETRGFPAMVGAADAMLKAADVHLAAYEKIGAGLCTAIIRGSVANVAVAVEAGMNEAERIGELNAVMVIPRPLDELEHTLPVASVWLEEREPLRFPVNIKDAVKETETKQLPDLAKLSIKVIEEL
>NZ_AP018254.1|WP_096621007.1|1633812_1634727_+|LysR-family-transcriptional-regulator
MNQATLHQLKVFEAAARHGSFTRAAEELFLTQPTVSMQIKQLTKSVGLPLFEQVGKRLYLTEAGRELFATCRQIFETIAQFEMKVADLKGLKQGQLRLAVITTAKYFIPRLLGPFCQLYPGIDISLQVTNHEGIIERMISNQDDLYIMSQVPEHLDVNCEPFLENPLVVLAPLNHPLAKEKNIPISQLSNEPFIMREPGSGTRRAVQKLFDEHGVNVKVKLELGSNEAIKQAIAGGLGISVLSRHTLIPDAGDLSILDVEYFPIKRTWYMVHPNGKQLSIVARTYHDYLLEAAKQAVVWEREKE
>NZ_AP018254.1|WP_096621008.1|1634824_1636444_+|mucoidy-inhibitor-MuiA-family-protein
MSRLLVETKIIAVTVYQDRALVKRRGVVRVGGGENGVGLSLEQELMVTNLPMTVNGDSVRVGGVGSVPVKLFGARCERIYTTEPVGTRAAQLTQQIEEVEAEKRSLDAQLEALALQSSFLQGLREKTEEQVAISLARKNMNLSDTLDLLNFLGSQYGEYAIASEDYKAQKRVLDQRLQVLRANLEQVQTPQPKQSLHVIIPISAAEEGEFELELSYVVGYANWRPLYDVRVDTSGGRVNVSYLAEITQNTGEDWQGVKLQLSTAKPGLGTLPPQLEPWYVDIPSPPTLAAMPSVTRDVGMNKRSQLMTMTDEFMDEVAQPAIMAETVTAAVTKTGSVVSFDLPGTVNVQSDGTPHKTTIFSDDFPCNFVHIAMPRLVSFAYLQADIQNHRQGVVLLPGKVNIFRDEVFVGTTNLDNIAPGEKFKINLGIDENIKINRELVERQVDKKLIGSDRKITYAYRISLENLSDREIKIKLSEQIPKSRHEKIKVRLTSVNPSTQVSDMGILEWQLQLGANVKQEIYYQFSVEYPSSLTVVGLDI

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Crispr_ID: NZ_AP018254_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_18

1675625-1675729

Orphan

Consensus_repeat	Method
CTACATACAGGACTTATCTTGACATGTCAATAACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_18

>merge|NZ_AP018254|18|1675625-1675729|CRISPRCasFinder
CTACATACAGGACTTATCTTGACATGTCAATAACACGTTACCGCCAGAGAGAGCTAACCCCATATTGGCCTACATACAGGACTTATCTTGACATGTCAATAACAC

>NZ_AP018254|18|18|1675625-1675729|CRISPRCasFinder
CTACATACAGGACTTATCTTGACATGTCAATAACAC	GTTACCGCCAGAGAGAGCTAACCCCATATTGGC
CTACATACAGGACTTATCTTGACATGTCAATAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621025.1\|1658256_1659909_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225885
NZ_AP018254.1\|WP_096621031.1\|1671151_1673509_-\|caspase-family-protein	unknown	unknown	gnl\|CDD\|379062
NZ_AP018254.1\|WP_096621029.1\|1666091_1667816_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|227319
NZ_AP018254.1\|WP_096621028.1\|1664165_1664483_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273926
NZ_AP018254.1\|WP_096621038.1\|1685558_1686839_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|222984
NZ_AP018254.1\|WP_096621026.1\|1660316_1660958_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NZ_AP018254.1\|WP_096621035.1\|1679388_1680882_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|283431
NZ_AP018254.1\|WP_157780668.1\|1673609_1675406_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018254.1\|WP_096625966.1\|1664718_1665495_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_AP018254.1\|WP_096621036.1\|1681052_1682228_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|336785
NZ_AP018254.1\|WP_096621039.1\|1687059_1687488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621041.1\|1689838_1690531_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP018254.1\|WP_096621040.1\|1688165_1689638_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_AP018254.1\|WP_096621034.1\|1677908_1679303_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621027.1\|1661253_1663869_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_AP018254.1\|WP_096621033.1\|1676293_1676485_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621030.1\|1667832_1669209_+\|nitrate/sulfonate/bicarbonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_AP018254.1\|WP_096621024.1\|1656193_1657402_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_AP018254.1\|WP_096625968.1\|1677382_1677790_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621037.1\|1682589_1685448_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621025.1\|1658256_1659909_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|225885	COG3349, COG3349, Uncharacterized conserved protein [Function unknown].	1.24134e-135
NZ_AP018254.1\|WP_096621031.1\|1671151_1673509_-\|caspase-family-protein	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	2.25836e-05
NZ_AP018254.1\|WP_096621029.1\|1666091_1667816_+\|ABC-transporter-permease-subunit	gnl\|CDD\|227319	COG4986, COG4986, ABC-type anion transport system, duplicated permease component [Inorganic ion transport and metabolism].	9.67143e-147
NZ_AP018254.1\|WP_096621028.1\|1664165_1664483_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|273926	TIGR02008, Ferredoxin_root_R-B1, ferredoxin [2Fe-2S]. This model represents single domain 2Fe-2S (also called plant type) ferredoxins. In general, these occur as a single domain proteins or with a chloroplast transit peptide. Species tend to be photosynthetic, but several forms may occur in one species and individually may not be associated with photocynthesis. Halobacterial forms differ somewhat in architecture; they score between trusted and noise cutoffs. Sequences scoring below the noise cutoff tend to be ferredoxin-related domains of larger proteins.	1.66142e-30
NZ_AP018254.1\|WP_096621038.1\|1685558_1686839_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|222984	PHA03100, PHA03100, ankyrin repeat protein; Provisional.	1.66697e-35
NZ_AP018254.1\|WP_096621026.1\|1660316_1660958_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	6.59624e-13
NZ_AP018254.1\|WP_096621035.1\|1679388_1680882_+\|VWA-domain-containing-protein	gnl\|CDD\|283431	pfam05762, VWA_CoxE, VWA domain containing CoxE-like protein. This family is annotated by SMART as containing a VWA (von Willebrand factor type A) domain. The exact function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon is several bacteria.	4.05421e-25
NZ_AP018254.1\|WP_157780668.1\|1673609_1675406_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.56668e-32
NZ_AP018254.1\|WP_096625966.1\|1664718_1665495_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	7.27324e-44
NZ_AP018254.1\|WP_096621036.1\|1681052_1682228_+\|AAA-family-ATPase	gnl\|CDD\|336785	pfam07728, AAA_5, AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	1.79422e-44
NZ_AP018254.1\|WP_096621041.1\|1689838_1690531_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	9.45653e-29
NZ_AP018254.1\|WP_096621040.1\|1688165_1689638_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_AP018254.1\|WP_096621027.1\|1661253_1663869_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_AP018254.1\|WP_096621030.1\|1667832_1669209_+\|nitrate/sulfonate/bicarbonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.89195e-115
NZ_AP018254.1\|WP_096621024.1\|1656193_1657402_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.11112e-49

>NZ_AP018254.1|WP_157780668.1|1673609_1675406_-|pentapeptide-repeat-containing-protein
MGWIVLTVDRIINDFPRGIKLEKNSKKKYQRKDLSSKKRTKKITTFFKKLSKIVLIISLIFLTIFSIRVLSDKLFYKCQKNMTSWECENLLPYISNNIFDKIEQLSILTGLIIFIFNLPEQQKRNHYEAWQLINSAEGQGGSGGRVQALQDLNEDGVSLAGLTATKGDLSEIKLPNADLSRANFSGTNLSKSIFKYADLNQAKLIKAQLKDADLSQANLCYADLSYADLSYAKLVGANLTNTKLVGTNLTEADLSYADLTFADLSQAILNQTNLENAELSSINFQETYPSNTNFIGTNLSGVNLSHLTLNGVDFSGAIFFGTNLYQTKLCGANLSSATFHNISFQDVDLSGANFFAADLRDAILSNLILDMINFTQAKLNNAQLENSSLVDVELVEADLSGANLSHANLKGANLSHAKLSRANLSHANLKSANLRGVKFLNANLIEVNFSGANFKDAIIDAQTQISEKWRLVWRIVNSQTKNQDFRNQDFSYANLRKVNLIGADLSNSNFTHADLSGANLENANLENTKLDNVSLSETNLQKVNFKGADFSGAYIRGANLEGAKFIGAINLVPKQITRNNNWEKAIYDKSFAELLGLS
>NZ_AP018254.1|WP_096621031.1|1671151_1673509_-|caspase-family-protein
MTSNIPSQVSSRKALVVGINKYEKGKIFPALKAPDYNAKHMKSILKQKCSFLVSDFSKPDRKQLKDEIIKLFLPNGNPPKMALFYFSGYILVKNSGLTEVFLTTSDSNPAQDDLGISLHWLREVLKCSKIEQQVVILDCCHSEGNNKLLNLDNFILDNYLNMSRFLIFSFQKSKQEFQQDGGRCSSLTKSMLIALDNQYKYGNDNAELVKYLKSNEMFLRKLGDFKRIYFGKIDNLAISNNKAESKSGEPDNTVSSHQCPYKGLSYFDSNPEDTSNFYGRDRTINQLLEKINKNNFLAVIGTAGVGKSSVIRAGLVYRLKEGLQISGSDNWYIPPVIQPGEKPLNSLAQAFVDTSLSAEEQKLQFREFIKLLDEKKENNGEKITDALEAMIDQVIKNYNKERVILVIDQFEEVFSLRKHQAPGERLGDNSEQYLFIRCLLEKLEAWSSKFSLVLAIRADFIGKCTERRYFGLAANIQQNLVAITPMDPDTLREVIVKPTEKLGVRVEEKLIDRLINDMKSVSGNLALLQYMLTKLWYHQDHQTLTLINYNNLGSLKGILNQHGNKVYQELKNQDQGAIAKTILINLVALGDGTTGYTRKKLLLENLIEICRRKNQLDNQQNISLEQIKSTIEDLQKSDLIILEEDIQENGEKKQVVTLAHEVLTQHWKKLREWVQEYRYIDIRKNQIISYAQEWDQEDIAQKASRLPSSQQLEESKVFMMQYGELLTSSDSELITRYIEAGQEKINYRNYIGNIIVITFFPFMIVLLLIISLLIYKFYKHCYCIL
>NZ_AP018254.1|WP_096621030.1|1667832_1669209_+|nitrate/sulfonate/bicarbonate-ABC-transporter-ATP-binding-protein
MTEATSTNLNLIAVEQVSKSFPLPDGKGEFTVLSGVSLIVKSGEVVALLGRSGSGKSTLLRIMAGLIPPSEGQVFSSGKPLRGANNDVAMVFQSFALLPWLTVLENVELGLEARGVKREERRQRALKAIDLVGLDGFESAYPKELSGGMKQRVGFARAFVLEPQVLFMDEPFSALDVLTSENLRGEIDDLWNAKTFPSKSILIVTHNIEEAVFLADRVVILGSNPGRIRGEVMIDLPRPHDRTHPRFASLVDYIYTVMTNPEIEVTGKVSDKTVPPSEIASPYAIALPHVRVGGISGLLELIVDRPSGTDDIPRLADRLQLAVDDLLPILDAAVLLGFAEVSQGDVRLTEIGQDFATTTILRSKDIFRQQVLTHVPVLSSIVQTLQEKRSGSMRADFFLDLWDEHFPHEEAERQFATTVDWGRYAELFEYDAGEGRLYLSETNPGLEHPVPLGSNQDG
>NZ_AP018254.1|WP_096621029.1|1666091_1667816_+|ABC-transporter-permease-subunit
MKTFPSPEALRRFPFGLADIAVILGTLVLLALIAQIGAGALVSFKPPEIVPTIDLNPRNLPYYAGRSTLRMFIALFFSTLFTLVYGYIAANSRRAEQVMIPLLDILQSVPVLGFLSITVTGFIALFPGSLLGLEAASIFAIFTSQVWNMTFSFYQSLRTIPKELDEAATLYQLSRWQRFTKLEVPSATIGLLWNAMMSFGGGWFFVAASEAISVLNQEYTLPGIGSYVAAAIAAENLVALGWALLTIAIVIVLVDQLFWRPLIAWSDKFRMEQSASGSVPESWVYDLLQAARIPRMLGKALTPVRETINGVLSRLTRSQSTIQLDTTQQQSDRLYNFVLLVIIGFLVAWALHFILTTVGIGEVFKTFGLGILTLLRVTVLLVFATVIWTPIGVAIGFNPKLARTLQPVVQFLASFPANFIFPFATLFFIRTNISIEWGSILLMALGAQWYILFNSIAGAQSIPTDLREMATDIGLKGWQRWRKLIIPGIFSAWVTGGVTASGGAWNASIVSEVVAWGSTTLTATGLGTYIAEATFAGDWPRITLGIGMMSLFVVGLNRLLWRKLYQLAEAKYHL
>NZ_AP018254.1|WP_096625966.1|1664718_1665495_-|TVP38/TMEM64-family-protein
MSTRNQQRFIKYKFPAKFMFLVLMTFALTLVFTTEPALGQESAQRVSGFNPQIWLKDALLWINGLGTEGALAFILLYIVATVAFLPGSILTLGAGVVFGVVMGSVYVFIGATIGATAAFLVGRYLARGWVAKKIAGNKKFRAIDEAVGREGLKIVLLTRLSPVFPFNLLKYAYGLTGVSLRDYVVASIGMIPGTIMYVYIGSLAGNIATIGTASQPGNPGVQWTIRIIGFIATVAVTIYVTQVARKALENEVLESKDR
>NZ_AP018254.1|WP_096621028.1|1664165_1664483_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MTQTYTVEINHQGQSLTIQVPENETILSVAEKQGLELPASCHAGVCTTCAAKITNGGTVDQSEGMGVSPDLQAEGYVLLCVAYPRSDLKIITDQEEIVYQKQFGK
>NZ_AP018254.1|WP_096621027.1|1661253_1663869_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLESYRQHVAERAALGIPPLPLDAQQTSELCELLKNPPAGEEEYLLGLIRDWALPTLRDRVPPGVDPAAYVKAGFLTGIAKGEITSPVIAPENAIALLGTMLGGYNVGALIELLQSEDSHLAQAAATALSHITLVYDAYHDVIDLAATNPWAQQVVDSWAEANWFTSRPTLPAAITVTVFKVPGETNTDDLSPATHATTRPDIPLHALAMLETRQPGSLETIAQLKQKGYPVAYVGDVVGTGSSRKSAINSLLWHLGQDIPFVPNKRAGGYILGGTIAPIFFNTAEDAGALPIECDVTQMETGMVITIHPYKGEITNEKGEIISTFQLKPDTILDEVRAGGRIPLLIGRSLTDKTRAALGLPPSTVFTRPQPPQDTGKGYTLAQKIVGKACGLPGVRPGTSCEPIMTTVGSQDTTGPMTRDELKELACLGFSADLVMQSFCHTAAYPKPVDIITHRELPDFFAQRGGVALRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPLGISFPAGSGLVAFAAALGVMPLDMPESVLVRFKGELQPGVTLRDIVNAIPYVAIQRGLLTVEKQNKKNIFAGKIMEIEGLPNLKVEQAFELTDATAERSCAGCTIKLSIETVSEYLRSNVALLKNMVARGYGDARTILRRVAKMEEWLANPVLMEADSNAEYAEIIEIDLNEIKEPIVAAPNDPDNVKLLSEVAGDPVQEVFVGSCMTNIGHYRATAKVLEGAGQVNTRLWIAPPTRMDETQLRKEGVYDIFVAANARTEMPGCSLCMGNQARVADGTTVFSTSTRNFNNRMGKDARVYLGSAELAAVCALLGRIPTVQEYLQIVGEKIQPFADNLYRYLNFDQISGFVDEGRVISQEEEAKILQMSAR
>NZ_AP018254.1|WP_096621026.1|1660316_1660958_+|EcsC-family-protein
MSIQKLLDWIVNVGIQGFGVLPPAEKVAEDHLSNCGNDCEKAIDSIISWRTTYAATTGFVTGLGGLAALPLSIPASFASSYALAANTSAAIAFLRGYDIQSDQVRTFILLTLIGDSTTEIFKNAGINLGTKVTKSLISQVPGKVLIEINKKVGFRLITKAGEKGVINLMKLVPLAGGMVGAFFDGAFVNKCGNTAKNMFSKNDDNDNNIICVR
>NZ_AP018254.1|WP_096621025.1|1658256_1659909_+|FAD-dependent-oxidoreductase
MSESSQGRKVVVVGAGWSGLGATYHLAKQGYDVTLLEAGAYPGGLVAGWKTPGGRSVEAGIHGFWYPYRNIFSLVDELGINPFTDWTRSSQYSPLGLEVESPIFQDLPRLPSPLGTFIYTKFQRLPLVDRLSALPLLYAVVDFDNSDEAWRRYDCVTARELFKQFGVSARLYREAFEPMLLVGLFAPGEQCSAAATLGMLYYFILAHQPNFDVVWCRGTVGEKIFRPWVERIEKLGGKIYANRRVTDVITENNRATGVVCGEEVFAADAVIFAVGITAMKKIVAGSPSLRNRKEFREVSNLGGIDVLATRLWCDTPRESLRDTPQESLRDTPQESLRDTPQESLRDTPQESLRDTPQESLRDRKINIPRPSNACFGFDKTTGWTFFDLNALHDEYRDEPLTVIEADFYHANQLLPLSDEEIISIVKGYLKTCIPEFAQANIIDSSVIRLHQAVSHFAPGSYRYLLPAQTSFDNIFMSGDWIVNRHGSWSQEKAYVTGLEAANLVISHFQTGNYANIIPVEADEAHIQALREINKSVRDIAKLVLPNFWLP
>NZ_AP018254.1|WP_096621024.1|1656193_1657402_+|MFS-transporter
MPIQVWIQTIGRGLYQLGSAVLLFYMPIVFVNYGNLSATEVGLAVGGGSVAGFAGNILGGILTDSQLFGRKYTLLGASIFAIIACAFATITVNFPLLLLANIIFGLSTGLYWTSADASVMDVTTPEQRQTAFSWLGVADNLGFGMGTLGGGLLLKVVKPAEYVFAAGGITFGVLLLLFALGAKETRVAGESHQMQKGWLTALTDSRLMIYLLVNTLFIMYIALVGGTLPLYFVNFGGTTDAVVANLFTWGYVGLGALLQVPVIRAIAALNYLHALMVSMGVWGVGFGIVAILGNYADMTEISQLGVFAVFAIAAIIYKPTSSAWISELAPANLRGAYTAIAYQCWTIGYVIGPIIGGWAMDQPRNVAQYTWLGIGLSTLFGLLVLQILSRQNQSTQIIENQQ
>NZ_AP018254.1|WP_096621033.1|1676293_1676485_+|hypothetical-protein
MPLSRIHLITCIRDYTLAVFCQQSDDWEFQIITTGGEVFGDNKVYCTQVAAENAGRNLLGRID
>NZ_AP018254.1|WP_096625968.1|1677382_1677790_+|hypothetical-protein
MPFVELFSGRLQGVISSGSDIERVYVSFIEAGTFNYYCSTNNNRPCGGLNSYYPCNHIQALLEEAINSYGVEAVAKYLKVSNHAEQAADIRKVLIESGHVQKEPANEVFSRFLNYLRYLELESSSLPIPEMNWFV
>NZ_AP018254.1|WP_096621034.1|1677908_1679303_+|hypothetical-protein
MAFPGTLNHLPDEIQSTLDLIAEFDQCFLTGFANLETKQQESLNSWQKIFIGTPLEKPINDACQGITTNEFQEKYFTALAAARVALQGAIYDGLQNQICGVLGRLQNSEIQLEVDSVSTPAHIPIYQESIRQCLMEVALVGFNRLDKSTLVPFISTLEQIQSEPLLIRQAALLTGYMNELMYQVPVTDSNTIPLFRWVDLWSQGMMGGLRKVVHPTPKIISGDFMGLGMDIKSHANFVSWTIYGLLMGDCITQVAKINQSAYKVDAISHQDIWLLFPQAKPILEAFGNQQILKLENIPLSPTGDLIWKGEGVLGDKYKLMEVAKEYFQVQSATEEAKISSFYLTPDSRHPIHIGEPVYLSNYQINQQEGEIILDWEDSGSLKIDCDRMGSFSDITADNLLASSEIFGLMRFDNCCWSVQPLAVNVNKKVIYTGQNVAKFIQGKPKTNTVEILQERASRLLRKSK
>NZ_AP018254.1|WP_096621035.1|1679388_1680882_+|VWA-domain-containing-protein
MESAIIQRRQVIYWRLLTAMFSLDEQGENFHRMSAEIVDELGLPQLILDPDISIDDLLRRHPELVPDFQQRIIPEEVIEGLEENSQNQELAATEKYSLRRGLVFSKMLLNAFGPNTQTNQVTAQQYSQWLKDVGYLERALGCNLRGQAPSIASGQGNSKLAGNSGDSGHFQKSGKTGQAQNGTGGSSASLGKGSGFNITEEQLRETLTALEGELIQKMALREVLQDNHLASQITPSMAIVEQLLRDKGNLSGTALKNAKRLIKEYIDQLAEVLRLQVAQTVTGKLDYSVPPKRVFRNLDLKRTIWKNLTNWNPDEQRLYVDRLYYRHASKKKIPTRMIVVVDQSGSMVDAMVQCTILASIFAGLPNVDVHLIAFDTQVIDLTPWVNDPFEVLLRTNLGGGTYIYSALQEAAQKILSPQNTALVLISDFYEGGSDQVLFDYIKSLKESGVHFIPVGAVMSSGYFSVNQWFRDKLKELGTPILTGSPKKLIQELKKVIV
>NZ_AP018254.1|WP_096621036.1|1681052_1682228_+|AAA-family-ATPase
MPRTKNNTVKAIPENNNQAAQQDVILRQPAELKYREELDYLASIDDGTKPFNWKLSPQMVRTFVLGSTPSQKLERVIEQKWYGDRAIAERAIVTLASDRGLLLIGDPGTGKSWLAELLAAAICGNSTYVVQGTAGTTEDQIKYSWNVAMVIAAGQSRDSLIPSPMMAAMQNGAMGRFEELTRCTSDVQDALISILSEKYISIPELKDDNVVFAQPGFNIIATANSRDRGVNELSSALKRRFNFVHMPVVTNRKQEKEIILFRTKELMNRHGFEVEVPPTLLDVLLQTFADLRETSNAATSDEQKLESALSTAEQIGVLEDAILHSRYFGSTSLEAGTLARSLVGTLVRRLPEDISVINQFWHSVVEKRTQEAKTSEWNEFLQGGKEAMGLK
>NZ_AP018254.1|WP_096621037.1|1682589_1685448_+|hypothetical-protein
MNLPESFHPLQAQLLGAAEKFATNAQPLGELLAALVADVDKATSEPLEIFPVCHHSPASALQMVRRLQHHPPRVIYLEMCEDLLPIVENLRDCKFPVALQAFATESVTFSPQDMPLSVVAPITEASAEYQAIAFALEHPGTELVFVDRAVDYVFQWEERPQERLEEEVTDEAKMHGTAIGLEIGGLTPSFDVFLQFLLKNSQTRHFAEWWEQYVEQAIINTDYHTYRQVMFLIGSLLRRLGTRQQEIATDRLRERYMWTRIKQHLQGRGIQPEEAIYICGAAHAASDVPEFGVGNSTVWEIPNLSQTTWMYGLIPSSFAAIEYQFSHPPGTVAMAEASWKKNLKAANLKPFSLGEQKKTQKPKNTNHTPQNPATATILTSFLTRPPEQVAADTEQLLQWCADIVGLARKNGYLASTADSIAIYQTSLLLAGMRNRLHPTPYDFQDAAITCLEKDRTPKKRNIFQLCQILLGGDRVGLVGYASLPPLAQNVYDRLAPLNVNLQGQTNQRALMDFKREPQLLPCSDVLWRLYYLLGSHIVQPIMGERRLGFKPIQESWEIRIGKYQRQLIMLGYEGVTLEQVIEQRLQKTAFDSQGTAKTALQTAEDSILYLHSPRLTSKLGEHAISLLVRETGATDAPEIFTIIRRLVHYYRTTPTGLPTWIENFVTIGYRHYTTLLPKAFSDRGTKPEQIAGMLNFIFTLESLALSLGCDRAQLLISVKQAASEQPDPAKLGLLWTTEWLLGLRTIPQMREFFHHVLRNEMLIRTLPDYLNGFLLSLGFAPRINRFVVELLAQLFGSVPDHTLLPWLPNLILRLRPHREILQNLIKEAANTYPQQLQGFANWVPVWEKENIPEVKTPSQTSLTSFTEGEIKARQLIFKYKAGTNAIAQRLLWSITQLLNIENIQWQELETKSTGENNFSRNYSISATEMQIQNLLKTHPDTMESLLGLLTNS
>NZ_AP018254.1|WP_096621038.1|1685558_1686839_-|ankyrin-repeat-domain-containing-protein
MTGNTTDELLLLAAQSGNLGKVKALLAVGAAPDGAQQNGTTGLMYAANYGYTEIVRTLIAAGANVNFRRQQYGITPLMVAAAAQKLDVVKLLIQNHADVNATNEDGSTALMVASQKGNREIVEVLLQAGADVNICDRDRDTSLRLAIAGGHRSIVELLVGAGADVNTPDATGETPLMMAVDAGDGEMVQLLLNGGANVNQHNLSQETALMAAAALGHSAIAALLLNYGADVNAQNLDGDTALHIATVEGHLDFVTVLLNRDANVNLRNKLGDTPLLLATLQGHKQIVEALLKRDAQVNGSNLGETALSLAVCQQHEEIVQLLLDYHADANFCNSQGKSLLLLAAEQNHTTIVKYLAASGANVNFQDQVGATALMWSASHGNAPLAQILLDAGADLDLRNQGGYTALMLAEFNQYTDVVEVLTRGRE
>NZ_AP018254.1|WP_096621039.1|1687059_1687488_-|hypothetical-protein
MKRFFIGGVSALLMVTGGILVPTIPASAQLANVKHHLNSLPTTRVAFVRGTNSKNITGADNRIYILRARKGQNLTLKINSLGARASVTLYGNNGKAISPVFSGLGGGEGKSLTVKLPVTGDYYIVGGGGPSFHLYDFTVTIK
>NZ_AP018254.1|WP_096621040.1|1688165_1689638_+|signal-recognition-particle-protein
MFDALADRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFITEVETKAMGAEVISGVRPAQQFIKIVHDELVKVMGEENVPLAHSATAPTVVLMAGLQGTGKTTATAKLALHLRKLERSCMMVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVERARAEGIDTVIIDTAGRLQIDDSMMAELARIKETVQPDETLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRRISGQPIKFIGVGEKVEALQPFYPERMASRILGMGDVLTLVEKAQEEIDLADAEKMQEKILSAKFDFTDFLKQLRLLKNMGSLGGIMKLIPGMGKLSDDQLRQGETQLKRCEAMINSMTPQERRDPDLLASSPSRRRRVAKGSGYKEPDVSKLVSDFQRMRSLMQQMGQGNFPGMPGGGGMFGGGGGMFGGGNRQTAPGWRGYPGGGNPGGKKSKPKKDKKKKGFGQL
>NZ_AP018254.1|WP_096621041.1|1689838_1690531_+|Uma2-family-endonuclease
MTIVNKPDVCIPYLENGDRLTRFEFERRYMAMPNLKKAELIEGVVYVASPLRYRQHGKPHSRIIGWLAVYEAATPGVELADNATVRLDLDNEPQPDALLRIESACGGQSSISEDDYVEGAPELIVEVAASSASYDLHDKLKAYRRNGVLEYIVWQVGEQKVSWFWLQAGEYQQLVPDDAGIIYSQVFPGLNLDVTALLADNLAQVLTVVQQGVTTKAHQEFVAKLATRRS

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Crispr_ID: NZ_AP018254_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_19

1728466-1728571

Orphan

I-D,II-B

Consensus_repeat	Method
TTTCAATCCCTAATAGGGATTATTTGGAATAGTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_19

>merge|NZ_AP018254|19|1728466-1728571|CRISPRCasFinder
TTTCAATCCCTAATAGGGATTATTTGGAATAGTAGAAGGTTGAAGGTGTGGATATCGAGTCAGAATTTATCGTTTCAATCCCTAATAGGGATTATTTGGAATAGTA

>NZ_AP018254|19|19|1728466-1728571|CRISPRCasFinder
TTTCAATCCCTAATAGGGATTATTTGGAATAGTA	GAAGGTTGAAGGTGTGGATATCGAGTCAGAATTTATCG
TTTCAATCCCTAATAGGGATTATTTGGAATAGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621068.1\|1725818_1727462_-\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962
NZ_AP018254.1\|WP_096621074.1\|1743734_1744907_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|224481
NZ_AP018254.1\|WP_096621063.1\|1718955_1720206_+\|ribulose-bisphosphate-carboxylase-small-subunit	unknown	unknown	gnl\|CDD\|215031
NZ_AP018254.1\|WP_096625974.1\|1722350_1722785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621070.1\|1730699_1731929_-\|MltA-domain-containing-protein	unknown	unknown	gnl\|CDD\|225377
NZ_AP018254.1\|WP_096621061.1\|1717187_1718027_+\|DUF3153-domain-containing-protein	unknown	unknown	gnl\|CDD\|371485
NZ_AP018254.1\|WP_096621077.1\|1746727_1748026_-\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_AP018254.1\|WP_157780669.1\|1725520_1725736_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621072.1\|1739116_1739983_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NZ_AP018254.1\|WP_096621067.1\|1724006_1724828_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_AP018254.1\|WP_096621076.1\|1745456_1746305_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|319818
NZ_AP018254.1\|WP_096621075.1\|1745154_1745451_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621062.1\|1718027_1718375_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892764.1\|1723218_1723734_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621064.1\|1720930_1721380_-\|response-regulator	unknown	unknown	gnl\|CDD\|381133
NZ_AP018254.1\|WP_096625978.1\|1743344_1743746_+\|chorismate-mutase	unknown	unknown	gnl\|CDD\|377905
NZ_AP018254.1\|WP_096621069.1\|1729406_1730489_+\|photosystem-II-q(b)-protein	unknown	unknown	gnl\|CDD\|130221
NZ_AP018254.1\|WP_096621073.1\|1741997_1742819_+\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|273227
NZ_AP018254.1\|WP_096621065.1\|1721677_1722073_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892829.1\|1732094_1733798_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621068.1\|1725818_1727462_-\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	7.78637e-53
NZ_AP018254.1\|WP_096621074.1\|1743734_1744907_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|224481	COG1565, COG1565, Uncharacterized conserved protein [Function unknown].	3.64637e-126
NZ_AP018254.1\|WP_096621063.1\|1718955_1720206_+\|ribulose-bisphosphate-carboxylase-small-subunit	gnl\|CDD\|215031	PLN00020, PLN00020, ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional.	7.28278e-165
NZ_AP018254.1\|WP_096621061.1\|1717187_1718027_+\|DUF3153-domain-containing-protein	gnl\|CDD\|371485	pfam11353, DUF3153, Protein of unknown function (DUF3153). This family of proteins with unknown function appear to be restricted to Cyanobacteria. Some members are annotated as membrane proteins however this cannot be confirmed.	4.71743e-38
NZ_AP018254.1\|WP_096621070.1\|1730699_1731929_-\|MltA-domain-containing-protein	gnl\|CDD\|225377	COG2821, MltA, Membrane-bound lytic murein transglycosylase [Cell envelope biogenesis, outer membrane].	1.06751e-117
NZ_AP018254.1\|WP_096621077.1\|1746727_1748026_-\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	4.70395e-09
NZ_AP018254.1\|WP_096621072.1\|1739116_1739983_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	8.35813e-06
NZ_AP018254.1\|WP_096621067.1\|1724006_1724828_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	1.5397e-84
NZ_AP018254.1\|WP_096621076.1\|1745456_1746305_+\|HAD-family-phosphatase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.79951e-72
NZ_AP018254.1\|WP_096621064.1\|1720930_1721380_-\|response-regulator	gnl\|CDD\|381133	cd17618, REC_OmpR_PhoB, phosphoacceptor receiver (REC) domain of PhoB response regulator from the OmpR family. The transcription factor PhoB is a component of the PhoR/PhoB two-component system, a key regulatory protein network that facilitates response to inorganic phosphate (Pi) starvation conditions by turning on the phosphate (pho) regulon whose products are involved in phosphorus uptake and metabolism. PhoB is a member of the OmpR family of DNA-binding response regulators that contains REC and winged helix-turn-helix (wHTH) DNA-binding output effector domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.28626e-43
NZ_AP018254.1\|WP_096625978.1\|1743344_1743746_+\|chorismate-mutase	gnl\|CDD\|377905	pfam07736, CM_1, Chorismate mutase type I. Chorismate mutase EC:5.4.99.5 catalyzes the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine.	9.43413e-67
NZ_AP018254.1\|WP_096621069.1\|1729406_1730489_+\|photosystem-II-q(b)-protein	gnl\|CDD\|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NZ_AP018254.1\|WP_096621073.1\|1741997_1742819_+\|signal-peptide-peptidase-SppA	gnl\|CDD\|273227	TIGR00706, Putative_signal_peptide_peptidase_SppA, signal peptide peptidase SppA, 36K type. The related but duplicated, double-length protein SppA (protease IV) of E. coli was shown experimentally to degrade signal peptides as are released by protein processing and secretion. This protein shows stronger homology to the C-terminal region of SppA than to the N-terminal domain or to the related putative protease SuhB. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.5065e-101
NZ_AP018254.1\|WP_172892829.1\|1732094_1733798_-\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.51451e-43

>NZ_AP018254.1|WP_096621068.1|1725818_1727462_-|iron-uptake-porin
MLNWNKYLLISPIMALGSFVGTASAEQTIAQEPLHQQASPTYQLDASKTQENTENPSGSFSLAQVTSVSQLSDVQPTDWAFQALQSLVERYGCIAGYPNGTYRGNRAMTRYEFAAGLNACLERVNELIRVASQDLVTKEDLATLQRLQKEFSAELATLRGRVDRLEAKTAELEANQFSTTTKLQGEVVMVVSGVAGGETVNDVNIKDNNVTLGARARVELVTSFTGKDTLFTRIQGNSILGPEIGTPEGSLFFAGETGNLNAELDALWYKFPLGRSTEVIAIASGGAADDVAETINLFDGDGGSGAISTFGTRNPIYYKMDGAGLGITQNFGDRLALHLAYLAGDANNPNRKNGLFDGSYGALAQLTFKPSDAIAVGLTYINAYNQELGTGSSLANPKSFLNDSLGVDTPFSSNSYGIQASIGLSERFVIGGWAGYTNARNLSTAGGSIDRGSVDIWNWAVTLGFPDLGKKGNLAGIIVGMEPKVTNSSINEIAKDRDTSYHIEAFYQYQVNDNIAITPGIIWLTAPDHNSNNKDAVIGALRTTFSF
>NZ_AP018254.1|WP_157780669.1|1725520_1725736_-|hypothetical-protein
MRWGSTCHREGSQAIAIYLVTLWVNKFWILDFPGVEDKHENHKYVADFHGFSAFFSDKLIRLCLSFVKNLP
>NZ_AP018254.1|WP_096621067.1|1724006_1724828_-|undecaprenyl-diphosphate-phosphatase
MESFIQAFILGLVQGITEFLPISSTAHLIIFRDILGWGQNWPKESIDAIQFGSVIAVIIYFWKDLQTIFSGAYAALMAKDWQREEWKIFLGIGIGAIPALLGGLIFKILKVDLESPMMIAIVAIVMAILLGLAEKFGQRKRGFDELEIKDGIIVGLGQMIALFPGASRSGSTMTTALFMGLERQTAARFSFLLGLPTLTIATLVQAKDVAVQADIFAPLVVGIISTFIFSYLSIAWLLRFLQRNTNWVFVWYRLAFGVMILALIGGNLFKSGN
>NZ_AP018254.1|WP_172892764.1|1723218_1723734_-|hypothetical-protein
MISIIDPQPSVSTAKSTATSTVPFRILSRAITGNPGDFSLVLVCCNSPGDRDNIFSLVKEIISAQIDDVNVPSTTRNLLTVIEKSLGRKKPEAVMVRGLETVKDINQLIISTNLMRDEFRKRFSFPLVLWVNDDILRKLVKLAPDLKDWAAVTIRFDQGANQLVAPRVMSA
>NZ_AP018254.1|WP_096625974.1|1722350_1722785_+|hypothetical-protein
MRNMSLTFASGCFGGIINSMIVWLSGTVGITQLFGVAIAPHLTSTWLYQRIVWGGLWGLLFLLPIWKKKYFYRGLMGSLFPTLVQLLIIFPLQAKKGIMGVELGRLTPVLVTFFNFIWGISTIYWLKLTCDRSCDAVVEMNSLD
>NZ_AP018254.1|WP_096621065.1|1721677_1722073_-|hypothetical-protein
MLIFSQGLISNIRNIKLNPNFHLRWYCLLVSLLLVNLGADFTRVSAQQTVNNMTPFQISPHQLVFLAYRGYFLNQGISSYTALIDDYIWGRITSKDLVNAAIKTNILPANFQTDSGYLNSVDAFLKDLNHN
>NZ_AP018254.1|WP_096621064.1|1720930_1721380_-|response-regulator
MLNPTTVLVIEDDTSLVETIRLYIEREQMGCLTANNGSDGIGILQRYRPDLVILDIMLPDFSGFELCQQVRSAQCFVPILMLTARVQESDRIQGLTVGADDYLTKPFSAKELIARIKSLLRRNYQKGYCDVKRGRGVLIDFECHQAYFN
>NZ_AP018254.1|WP_096621063.1|1718955_1720206_+|ribulose-bisphosphate-carboxylase-small-subunit
MGYYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKSFQCELVFERMGVECTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDIDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDANPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWQPNRDDKVGIVEGIFAEDGLSRREVEQFVDTFLDQSIDFFSALRSRIYDEQIRQFIYDIGLENVSQRIVNSTEAPPQFRKPDFSLSHLIEMGNLMVSEQKRVSESNLVDAYNRGLYSRKPNNSPATPNSPEKTTIYQINYADQPSPGNGKKPINPEVRSRIEQIFAQGYKIGIEHADSRRFRTGAWHSCQTGNITSPNEAINTIESCLADYADEYVRLVGIDPKAKRRVMETIIQRPN
>NZ_AP018254.1|WP_096621062.1|1718027_1718375_-|hypothetical-protein
MFNRYLALGLITAITMITSPVFAENQTQGNSGTNNINATNVGKGNRIRVINRTYVIQSQRRAKKILCQSPNSTNQTQGNMTNNTITATNIGRRNRIKITNTNYIVQGQSVECPAQ
>NZ_AP018254.1|WP_096621061.1|1717187_1718027_+|DUF3153-domain-containing-protein
MRLTKVVALIKLLWQSLIRRRLVVLIAAIAMLLSGCVEYDVGVKFDGANRGEFVQHIRLGEKLTSFSSEPVYEWLNSIERRTRQLEGKSQRISQSELIATIPFNSGQELQTKFNQFFHPQETVKNQNPESEQDLPKIESNLLLFQNNFLLLVRNRLIYDLDLRSLALISSNGNTLTNTSAILDLDFSLKTPWGAKNIPSNENAIAPEQNGKKLVWHLVPGTLNHIEVVFWLPNGLGIGGLFILIFVATGYYLRYFYLPNPFLQDTQTDTTPQTTTAVIE
>NZ_AP018254.1|WP_096621069.1|1729406_1730489_+|photosystem-II-q(b)-protein
MTTTLQRRESANVWERFCEWITSTDNRLYIGWFGVLMIPTLLAATTCFIIAFIAAPPVDIDGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGCFCYLGRQWELSYRLGMRPWICVAYSAPLASATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAAVFGGSLFCAMHGSLVTSSLVRETTENESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAGEAAPVALSAPAING
>NZ_AP018254.1|WP_096621070.1|1730699_1731929_-|MltA-domain-containing-protein
MQFRHRLIHKFLPLLLFPICCGLSLLACQSQPEIATRRENQPLSTPQSTPTPPPLFQTSPPQDPNYFMDDQIWGKPGDKQNLIAAIDHSLSYLQRPTAKKAYENYIIPEITHARVEKSLKRFRELLIKSQNPQELQTAVNQEFVFYKSIGSDKKGSVLFTGYYKPIYLASRQPTNEYPYPVYRLPDDFQTWSKPHPTRVELEGIDGLQAAQGKLKGLELFWLKSRIDAFIAQVQGSAVLKFPDGTTTTINYAGNTDHDYVSLGKELIKDGKLPSEGITLEKVINYLEKNPESQNIYLPRNPRFIFFKDTKNAPASGSISVPVTPERSIATDKSLMPPGALAIIRAPLPFVNQGKIEQRLVSRYVLDQDTGGAIKTPGRVDYYIGVGKEAGDRAGAIVNQGELYYLLLKD
>NZ_AP018254.1|WP_172892829.1|1732094_1733798_-|PAS-domain-S-box-protein
MHRIILTTIEISDRKQAEIALQASQSQLQNLANNIPGVISRYQTDTQGKTICLYISDRSTDIFGFPPAQIQASEDCIFRHIDPADQESFQIAVTQSIQTLQPLIWSGRYNLPTGEQKWIESNFIPTPQADGSVIWDGFTLDITQRKIAEREQQKLLTIINATSDIVGIADAQGNNLYINPAGQTLFGLTDPQAEFNIATVHPPHIHEKMFHQAIPTAIQQGIWMGESMIVNSQGEEIPISQSIMVHKDPSGNVEYFSTIIRDIRDIKIAEKLIQEKNQVLEQTLIQLQKSQAQVVQSEKMSALGNLVAGVAHEINNPIGFINGSINNGKDYVQDLLSHLDLYQQYYPQPVTAISDHAEDIDLEFLREDLPKLLDGMKAASDRIKSISTSLRTFSRADTENKIAANIHEGMDSTLLILKYRLKGNENRPAIEVIQNYGNIPAILCFPGQLNQVFMNILANAIDVFDEAAQESTFTELKAKPQQITIQTTLINPNQIQIRIRDNGKGMSPETQARIFDHLFTTKAVGKGTGLGLAIARQIIVDKHNGTIEVRSQLGKGTEFCICLPVNG
>NZ_AP018254.1|WP_096621072.1|1739116_1739983_-|thermonuclease-family-protein
MSMILIKGTYRILNTAPDGDSIRFYPHNPELWKKLPRRVRSNFAGGAQLRLDSIDALETHYQPQGNITGMVHQPLEYAHAATDELLKFLGFQEFTRNNKEVITAVTPEQVPGYILTRSADVYGRCVAFVFAGDIDREDGDSIFFDGELLQKSANYHLIQTGLTYPTFYSKLYPDIRKELIIATQTARQAGKGLWSLDQTTVGFELENLQTLTEQVVILPKLFRRLLSYLAINDGSYSLDGFMDFLESQNDRLIILPEGHVTGFDFVVTVESQRVKMNYSPEDLVFMEK
>NZ_AP018254.1|WP_096621073.1|1741997_1742819_+|signal-peptide-peptidase-SppA
MVWPFQSKFRKQIARIEITGAIASATRKRVLEALKTVEERKFPALLLRIDSPGGTVGDSQEIYAALKRLRDKVKIIASFGNISASGGVYIGMGAQYIVANPGTITGSIGVILRGNNLERLLEKIGVSFKVIKSGPYKDILAFDRELTPPEQTILQELIDTSYQQFVQTVAEGRSLPVETVKSFADGRIFTGQQALELGVVDRLGTEEDARRWACELVELDPEKTKCFTFEEPKSLISRILPGNNTNKNIIASGIDWLEFEVSTSGLPLWLYRP
>NZ_AP018254.1|WP_096625978.1|1743344_1743746_+|chorismate-mutase
MRAIRGATTVSENTVDAMHEAVMELLDELENRNQLNPHDFVSVMFSVTNDLDAIFPAAIARKRPLWDSVPMLDVQQMHVQGSLKRCIRFLIHAYLPVNMPIHHIYLRNAANLRPDWSRPQSFPAPSTSLESRV
>NZ_AP018254.1|WP_096621074.1|1743734_1744907_-|class-I-SAM-dependent-methyltransferase
MSNDTQFTLANLIKQQIRQNPRQRITFAEFMEMALYHPELGYYSSRAGNLGKEGDFFTSVHLGADFGEMIANQLLEMWEILQRPANFTLVEIGAGQGLLALDILKYLQAKHEDCFAATKYTIIEQSPKLQREQQQRLQGWSVTWCDLGEIPENSLVGCIFSNELVDALPVHQFAIASGEVQEIFVSVRENPGVKGGFEFVEVMDDPSTPELVNYLQSFGFDISNFPDGYRSEINLAARDWLGNVSRCLQQGYVITIDYGYPGHRYYNPRRTTGTLQCYFRHQRHNNPYINVGYQDITSHVNFTALEKWGEQYQLQTLGFTQQALFLMALGLGDRLVQLPYTNLPTMEVLQRRDYLQQLIDPMGLGGFGVLIQGKNVPNQLPTGLKQPSNP
>NZ_AP018254.1|WP_096621075.1|1745154_1745451_+|hypothetical-protein
MSVFTNFLRSLVLTVVFCALAPLLFFGLVLGVATLIGYLPGLANLSGAIADGIMAFLTTFGSGTPIWGIGIICLTCSFVGVLFDIYVHYRYLILHTDS
>NZ_AP018254.1|WP_096621076.1|1745456_1746305_+|HAD-family-phosphatase
MQNPSLPPSMDIKLLVVDIDGTIAGHDNTVSEAVQTAIKQVQAQGIQVAVATGRMYRSALRFHQQIASQLPIIAYQGAWIQDPISQHRHRHLPVERQMVEEVLDYLEQPDLLSLLSVHFYINDELYVRQITKDTEMYAERSGIKPIAVGDLRQVMEIEPTKILALTPDPKITDYLLKSLRDRYHPSQLYLTKSVSTFFEAAHPQVNKGGAVRYLAEEILQLRPENVMAIGDNFNDVEMIAYAGIGVAMGDAPPEVQQRADWVAPSVEEDGVAIAIEKFLLLN
>NZ_AP018254.1|WP_096621077.1|1746727_1748026_-|O-antigen-ligase-family-protein
MTISHPDLSLQLPANLLQWGILILPFYPTVGAIILGFAALLAWLRKYPILIHRPLNWGFAVFSIFLIISAIFAWQKQDAVFGLFNLIPFFWLFAATSIIVQTPTQLRRIAQILVYVSLPVCLLGFLQLFLQLQTPPIWEQIFGWSIIAGGNPTGRMSSLFIYANIFAGYTVTVFIFGLGLWIELYHKIRCRSIQPNLNFILLTLIVMINFASLILSNSRNAWLIAILTCIAYALYQGWRIIVSVTLGIGTSMLLAAYAPLSIANFFRRFVPEFFWSRLNDQQFRDRPVVTMRKTQWDFVWGMMRDRPLTGWGLRNFTPLYEKNTGVWLGHPHNLYLMLAGEVGIPATLLFITLLMGILISSIQALRIGKNLFSEDDMIIFTYILGFLGFLLFNTFDVTLFDFRLNVLFWTIMGALTGNIYYLKSLDKKSLHN

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Crispr_ID: NZ_AP018254_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_20

1768784-1768895

Orphan

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGATTATTTGAAATTGTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_20

>merge|NZ_AP018254|20|1768784-1768895|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTGAAATTGTAACTCCAAGGCTTCCCTTGATATCTTGCTTCCGGATTCCTTGTTTCAATCCCTAATAGGGATTATTTGAAATTGTAAC

>NZ_AP018254|20|20|1768784-1768895|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTGAAATTGTAAC	TCCAAGGCTTCCCTTGATATCTTGCTTCCGGATTCCTT
GTTTCAATCCCTAATAGGGATTATTTGAAATTGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621097.1\|1774208_1775807_+\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_AP018254.1\|WP_096621100.1\|1778182_1778791_-\|rubrerythrin-family-protein	unknown	unknown	gnl\|CDD\|226853
NZ_AP018254.1\|WP_096621095.1\|1771236_1772430_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_AP018254.1\|WP_096621084.1\|1753776_1754493_+\|GUN4-domain-containing-protein	unknown	unknown	gnl\|CDD\|368432
NZ_AP018254.1\|WP_096621099.1\|1777182_1777641_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018254.1\|WP_096621094.1\|1769687_1771121_-\|sodium:glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_AP018254.1\|WP_096621089.1\|1763362_1765399_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_AP018254.1\|WP_096621088.1\|1762131_1762971_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223640
NZ_AP018254.1\|WP_096621102.1\|1779660_1782837_-\|alpha-mannosidase	unknown	unknown	gnl\|CDD\|223460
NZ_AP018254.1\|WP_096621101.1\|1779223_1779571_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621096.1\|1772589_1773114_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|178534
NZ_AP018254.1\|WP_096621086.1\|1758856_1760992_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_AP018254.1\|WP_096621090.1\|1765843_1767241_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_AP018254.1\|WP_096621085.1\|1754704_1756072_+\|carotenoid-oxygenase-family-protein	unknown	unknown	gnl\|CDD\|226196
NZ_AP018254.1\|WP_096621093.1\|1769189_1769393_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621091.1\|1767259_1768669_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625980.1\|1756753_1758685_+\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|226124
NZ_AP018254.1\|WP_157780670.1\|1754544_1754685_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621098.1\|1776196_1776790_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621083.1\|1751785_1753213_-\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|180944

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621100.1\|1778182_1778791_-\|rubrerythrin-family-protein	gnl\|CDD\|226853	COG4445, MiaE, Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	8.76204e-91
NZ_AP018254.1\|WP_096621095.1\|1771236_1772430_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	1.53376e-134
NZ_AP018254.1\|WP_096621084.1\|1753776_1754493_+\|GUN4-domain-containing-protein	gnl\|CDD\|368432	pfam05419, GUN4, GUN4-like. In Arabidopsis, GUN4 is required for the functioning of the plastid mediated repression of nuclear transcription that is involved in controlling the levels of magnesium- protoporphyrin IX. GUN4 binds the product and substrate of Mg-chelatase, an enzyme that produces Mg-Proto, and activates Mg-chelatase. GUN4 is thought to participates in plastid-to-nucleus signaling by regulating magnesium-protoporphyrin IX synthesis or trafficking.	1.0796e-93
NZ_AP018254.1\|WP_096621099.1\|1777182_1777641_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.40417e-18
NZ_AP018254.1\|WP_096621094.1\|1769687_1771121_-\|sodium:glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	1.39613e-64
NZ_AP018254.1\|WP_096621089.1\|1763362_1765399_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_AP018254.1\|WP_096621096.1\|1772589_1773114_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|178534	PLN02948, PLN02948, phosphoribosylaminoimidazole carboxylase.	1.30589e-101
NZ_AP018254.1\|WP_096621102.1\|1779660_1782837_-\|alpha-mannosidase	gnl\|CDD\|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	0
NZ_AP018254.1\|WP_096621097.1\|1774208_1775807_+\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	3.83091e-140
NZ_AP018254.1\|WP_096621086.1\|1758856_1760992_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.01081e-63
NZ_AP018254.1\|WP_096621090.1\|1765843_1767241_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	1.63205e-128
NZ_AP018254.1\|WP_096621085.1\|1754704_1756072_+\|carotenoid-oxygenase-family-protein	gnl\|CDD\|226196	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_AP018254.1\|WP_096625980.1\|1756753_1758685_+\|50S-ribosome-binding-GTPase	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	2.22591e-73
NZ_AP018254.1\|WP_096621088.1\|1762131_1762971_+\|RNA-methyltransferase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	1.05628e-76
NZ_AP018254.1\|WP_096621083.1\|1751785_1753213_-\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|180944	PRK07362, PRK07362, NADP-dependent isocitrate dehydrogenase.	0

>NZ_AP018254.1|WP_096621091.1|1767259_1768669_+|hypothetical-protein
MVSNIEVKKTVRRNYWFERLIALIALLNFALVLFDLSYIPGRDFYLQVLPKITQVYDPVKGITPHPETQNYLRIVNQLEEQVLQTGLKSDSVANLLDKLRLLSNQMIGDNPFDVANKSGTLAKIKHEVRLRTNQTSARAAFNTFWSQDYLSQRGWQSEISFFNTQIRPLIHSNYYRDIGRFGNFIDWFWLIDLPFIAIFALEFLARTYYISRHRPDLNWLEAILKRWYDLFLLLPFWRWLRIIPLSIRLYQTQLLNLQPLRSQLNHDFAVNFAGEITEMVGIQVIDQLQNAIRKGDLTRWLLHPESRKPYIQVNGTNEVKAIATRLVNVSVYDVLPKIQPDLEAWVHHSLTSTLNQSPLYQQIQNLPGLGNLPQQLTEKLARDLSQSVSDQLAQAISDPVGGELTSRLITNFRDALETELRKTHNIQEIQSLLIDMLEEIKINYVKGITDAGMEKVLAEAEHIHKIIYR
>NZ_AP018254.1|WP_096621090.1|1765843_1767241_+|TldD/PmbA-family-protein
MTTLSTDIKNLASDLIRKHSHHVDYLMIRLEVSQSTNILIRGDKLESLSEVISIGGHVRACYKGGWGVSCFNDVQTIPERFTEAISAARMVGEEKTMLAEIEPIQTQCHLPLVGTDPRQIPLAQKKELCDRYRDLLKSTHPQITTTSVRYGDSSQQVIILTNEGTDIEQSWVDMEMRFAATARNGETVQTGRETIGSRNGYEDLIKLDEQVQGAAKRAVSALSLPSVRGDTYTVVIDPILTGLFVHEAFGHLSEADMAYENPDLLAVMTIGRSFGCKELQIFDGAALSGHRGSYFYDDEGTPATTTQLIQDGILVGRLHSRETAGKLGEAPTGNARCLNYHYSPIVRMTNTWIERGSTPVYDLFTDIKEGVYARNWLGGMTNGEMFTFSAGEAWMIRNGRIAEPVKDVTLSGNVFQTLADIEAIGDDFYWDESGGCGKGGQNGLPVGCGGPSLRIRNVVVGGEVV
>NZ_AP018254.1|WP_096621089.1|1763362_1765399_-|NAD-dependent-DNA-ligase-LigA
MDVKVEARVKELRKLLQQASYAYYVLDCPIMEDAVYDQLYRELQNLENQYPQLITSDSPTQRVGEKPATQFFSVRHHVPLYSLENAFSVEELKAWEGRWLRQLGSEVEREYVCELKIDGNALALTYEKGVLVRGATRGDGIMGEDITQNVRTIRSIPLRLNLEGLETWERIEVRGEAFLPLDVFAQINGEREKNGETPFANPRNAAAGTLRQLDSRIVDKRRLDFFAYTLHIPGQDDAMIANTQWEALELLSKLGFKVNPHRRLCVSIQEVADYYRYWDTERLNLAYMTDGVVVKLNSFKLQEQLGFTQKFPRWAVALKYAAEEAPTVVENISVNVGRTGALTPLAEMRPVQLAGTTVSRATLHNSDRIAQLDIRIGDTVIVRKAGEIIPEVVRVLKELRPEITTPFVMPTHCPVCGQPVVKERDEAVSRCVNISCPAILKGAIEHWVSRDALDIRGVGEKLVHQLVDRGLVHSVADLYELTVSQIAGLERMGQKSAEKLVAAIAQSKNQPWSRVLYGLGIRHVGNVTAQILTEKFPTVADLSQASTAKISAIYGIGAEIADSIYNWFQVDSNQRLIARLQALGLQLANTQEELATNTTNQVLSGKIFVITGTLPSLKRDEAKALIQKAGGKVTDSVSKNTDFLVAGSEAGSKLKKAESLGIKIIDEAQLLAMLPDRN
>NZ_AP018254.1|WP_096621088.1|1762131_1762971_+|RNA-methyltransferase
MLTSLQNPLVKQFRKLHTAKERHKQGLFLLEGTNLVTEAVAVAFPLQTVCCTERWQKNHLSLWNQLSQQCRTELVSEEIISAIATTINPDGVVAIASRSVVTHKIPFTGIVLVLETIQDPGNLGTIIRTAAAADVSGLWISQDSVDLDHPKVMRASAGQWFRLPMQVSPDLLTTVNQAKTAGMQVISTLPTAEKTFWEVDWRKPSLILLGNEGAGLSNQLSTTADMAVNIPLANQVESLNVAIATALMVYEAYRQRFQDKYGEIGSGEWESGVPSSRSA
>NZ_AP018254.1|WP_096621086.1|1758856_1760992_-|protein-kinase
MNPFYCSKGHENPTGSKFCLHCGEKLDMFGNVPSIQPGLTLGERYLIVRQLGQGGFGRTYLAEDINRFRELCVLKEFSPQVQTAYVLQKAEELFQREATVLYQLQHPQIPRFRELFRTKQADKEYLFLVQDFVEGQTYNTLLRQRLSQGLRFSEAEVKQLLQQILPVLEYIHGVGVIHRDISPDNLILRSSDQLPVLIDFGGVKQVAATVVALQNANPDGSVSSSPGTRLGKIGYAPPEQMQTGIAEPHSDLYALAATVLVLLTGKSPQELIDTYNLRWQWHNIIDLSPSFTAILDRMLSPIPTDRFQSARQVIQALNTPLTSQPVAPTQAVNPSPLPIPTQPAYPPVTNPPSPVSLPSTSPSWTAGKIALFVLGVGCATGIGIWGLSSILSANKIDDANPIGSVTESPTPVPTQTQPTDPLANYSPVERARKERLRERRQQLGVDFNFYVNLVNQIFWDKNPSFRGRSLSDGSADETARAEWDATAAEVLEKLSLLSNESRRRLGNYTSADRDRWKVQVNNINVGSRSLFDLGDAAFFHHFPEQRGKNFIDQPIGQVWHGFVNDRLVAILGGTAFRRLEFSPGATGVTTRGVLKPGDGMVFIARLSEGQDMQVKLTANNKVLLSIYSPSGKLRFLEDSTQREFFLNLPETGFYEFVIAATGNSDYNYTLEITATNPTPTPTETPTPTPTPTPTETPTPTPTATPTETPTP
>NZ_AP018254.1|WP_096625980.1|1756753_1758685_+|50S-ribosome-binding-GTPase
MVRWQSWRSLVLILPFAAIVGFMLVAAASQIHAWGLNWIWAVFTLVFLGWRWLLVRWTQPTLQQVNAVVEEVQRELEASQDSLTSVTSLPPDTASRVEAALQQILHDSQQDAPIWEDLQTFWQRCQSLVTEIARIYHPEVKYPLLNIYIPQAYGLMRGTVDDVDQWMQKISPVLNQVSIGQVYEAYEIYQKLEPSARKLLKALNLAQWLLNPVAAIANTTTQRYSERANQQLLINLSQLLREVTLRNLSRQAAILYSGNTLPASFNLVTDSNAATSVKTQTLRDILTAAEPLTTVEAKPVNLLLVGRTGAGKSSLINTLFQADLAAVDVLPSTDVIQCYHWQSQGMEALNLWDTPGYEQVKRSDLREQVLNYARTADLLVLVTPALDPALQMDVDFLQEIKAENPDLPCLAVVTQVDKLRPLREWEPPYDWEWGERPKEVAIRAACEYRVQVLGELCHAVIPVVTEDGQTGRQKWGVDELAIALYGEINPAKQLRLARFLRDLDTKAIAAAKVIDHYTFQMTTTQGLTALLKSPILQFISTLSTGSPALAKILAEKIPVEQLPVVIGKIQMGYDLFSLLNNDSSRKFDLLSLWGIITENPASPDENAAAFGHAYVEYLTQNLTIPELRSRVEFYLQKAGGQGQ
>NZ_AP018254.1|WP_096621085.1|1754704_1756072_+|carotenoid-oxygenase-family-protein
MVTTGINPYLDGNFAPVQEEVTTEIQSIIGELPPDLSGMFVRNGPNPQFPPIGAYHWFDGDGMLHGVRIQGGQASYRNRYIRTQGFEIERKEGKAIWSGLLEPPQINNPYGPYKNVANTALVWHAGQLLALWEGGVPHAIQVPELDTIGEYTYNQQLKSAFTAHPKVDPVTGEMMFFGYSFSPPYLQSSVVSSQGQIQRTIPIDLPMGVMMHDFAITANYTIFLDLPLTFSMERIQRGEPMMMFEADKPSRFGIMPRHGDNRSIRWFEAPSCYIFHTLNAYEQGDEVILIACRMSSTSVLGESSDPQGDIPRLHRWRFHLPSGTTQEEPLDDHVSEFPRINENWLGRPNRYGYTSKMAGDRLPLFTGIIKHDLQQNRQYIHEFGSGRFGGEAVFAPRPGATQEDEGWLITFVYDSHQDCSELLVVNAQDMTGEPVARVILPQRVPYGFHGIWLEE
>NZ_AP018254.1|WP_157780670.1|1754544_1754685_+|hypothetical-protein
MVVQSATKFPISLAGMIQPFAVLTFAELSKDVFYRISPMMGEYICL
>NZ_AP018254.1|WP_096621084.1|1753776_1754493_+|GUN4-domain-containing-protein
MTDPMTLSGNANELDAVRVQLIDGSERVQQQLLPQITGLGEAGDDIFMEFLLKRSGNPPKWIDGKVYQILRTANSERVKAFLQTHFPQGVVPLLSEVGIDYQPLQELLVNQDFEAADRLTMQKMCELAGEAAIQRKWLYFTEVDSFPVTDLQTINNLWVVYSEGKFGFSVQRELWLGLGKNWDNLWAKIGWKNGNNWTRYPNGFTWDLTAPKGHLPLSNQLRGVRVIAALFAHPAWDK
>NZ_AP018254.1|WP_096621083.1|1751785_1753213_-|NADP-dependent-isocitrate-dehydrogenase
MYEKITPPTTGAKITFENGEPVVPDNPIIPFIRGDGTGIDIWPATQKVLDAAVATAYPGKRQIHWFKVYAGDEACELYGTYQYLPQDTLTAIEEYGVAIKGPLTTPVGGGIRSLNVALRQIFDLYACVRPCRYYAGTPSPHKSPEKLDVIVYRENTEDIYLGIEWKQGSEVGDRLIKLLNEELIPATPEHGKKQIPRDAGIGIKPISKTGSQRLVRRAIKHALTLPKAKQMVTLVHKGNIMKYTEGAFRDWGYELATTEFRNECVTERESWILANKEKNPDLTALENARMIDPGFDNLTPEKQQQIVQEVETVLQTIWTSHGDGQWQNKIMVNDRIADSIFQQIQTRPDEYSILATMNLNGDYLSDAAAAIVGGLGMGPGANIGDRCAIFEATHGTAPKHAGLDKVNPGSVILSGVMMLEYLGWQEAADLIKQGLASAIAKGQVTYDLARLMEPPVPPLKCSEFANAIIQGFVQS
>NZ_AP018254.1|WP_096621093.1|1769189_1769393_-|hypothetical-protein
MASALGVRLLVQIKIGAGEKAPTLYTIFEKNILVLAPKVNPLNGSLLFATITLLIWLMVAWVMYRQR
>NZ_AP018254.1|WP_096621094.1|1769687_1771121_-|sodium:glutamate-symporter
MKLIDVFWAYIIIGILILVGRLIRQRIWVVRSLYIPSSVVAGIIGLLLGPSAFGAVVKASNPTSALANGIFAPNIIDVWKQSPSIFINIVFATIFIGQSIPSLQMVWRKAAPQAAFGQILGWGQYVIGLLLALTVLVPVFKLPMISGCLIEVAFEGGHGTAAGMAKTFEELQFPAGADLSLALATVGLISGVVAGTAIINWGYRSGNLQVIRELKDERKQDQSAEPSTEETPEIQAARANLLRDLLIDPLSFNFGFVGLAIAFGWLLLEGLRALEAATWGVNGLKLMTYVPLFPMALIGGAIVQIIIERTRRRYLISRALIENIGGLALDVTIVTAMATISLAAIGDNLIPFLLLSAAGIIWNVCAFIFFAPRIFPTFWIERGIGDMGQSMGVTATGILLMRMADPDNHSGAFEAFAYKQLFFEPILGGGLFTAAAPPLVVRFGAVPVLFSALVIVLLWSVFGIINCRRIKSADFRF
>NZ_AP018254.1|WP_096621095.1|1771236_1772430_-|N-acetylglucosamine-6-phosphate-deacetylase
MSTNLISLINARIPGKNGLYRLLIDKCGLLVDVSEVSVEIDSHIIDANTIDLAGDWISSGGVDLQINGGLGLAFPDLTADNAYMCANICKYLWSCGVDGFTPTLVTTSVEKIQSTLAVIAAYMDHATSDGDQESAQILGVHLEGPFLNPQKRGAHPEEYLLPLTQANIQRVLGDYAHIVKIMTLAPEMDETGDAIAYLRSLGITVSLGHSLATAEQAMTAFDQGATMVTHAFNAMPSLHHRQPGLLAAAITHPQVMCGFIADGEHVVPMMVDVLLRASNYQGGLFLVSDALAPLGLGDGIYPWDERQIEVKNGTARLLDGTLSGTTLPLLVGVENLVKWGICSPEQAILMATVAPRRAIGLPEMVINHISAHNLLRWHYDADTQEISWQRLVRNLSV
>NZ_AP018254.1|WP_096621096.1|1772589_1773114_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MPSNPLIGIIMGSDSDLPTMQDAIAVCEDFAVPHEVQIVSAHRTPERMFEYAKTAHHRGIRVIIAGAGGAAHLPGMVASLTPLPVIGVPVSTRQLHGVDSLYSIVQMPAGIPVATVAIGNAKNAGLLAVRILASHDPKLLEKVEQYRQNLQDMVMKKQESLETLGYSQYLQQMG
>NZ_AP018254.1|WP_096621097.1|1774208_1775807_+|ammonium-transporter
MKLKLKPNRKSRGRNRRQVKSSINASLMARIFAGIKQLTPSWQASIPLASLIVLAWGYAAFAQAPTGPSNIELKIALDTLWVAIAAFLVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFALATIAFWVVGFGFMFGDGNSFIGLNGFLLQGADNTLEVATGAAKEYQGVFSSLKWANVPLSAKFLFQLAFAGTAATIVSGAVAERIKFIDFLIFSLLLVGIAYPITGHWVWGGGWLAKRGFWDFAGSTVVHSVGGWAALMGAAILGPRLGKYQDGQPVALPGHNMSIATLGCLILWLGWFGFNPGSFMAADPQGIAHVALTTNIAAAAGGTAATFTAWFYLGKPDLSMIINGILAGLVGITAGCAYVSLGHAFLIGLIAGILVVFSVTFIDRLGIDDPVGASSVHLVCGIWGTLAVGLFSAGPGVYSWYGEGAGPLKGLLAGGGIEQLINQFIGVISVGGMTVLVSTIFWYVLKFTLGIRVTPEEELEGLDIGEHGMEAYSGFLKEAGSAGGFVEAGSAGIPPQRDYPSGY
>NZ_AP018254.1|WP_096621098.1|1776196_1776790_-|hypothetical-protein
MQKKSWNYTHTLLSFVTIIAVGSALPVRAETINSTTANTPTSTSDLEIKTASTQIAQSFQPGRATRSGSSYIGVGGNLGLTGNTRVGEGSFAVFSKVGLTRNLSARPAALVGDNTVFLVPLTIDFPQENLEITQLSVAPYIGGGVAISTGRDSTVGALITGGVDVPLSSQITATGGVNVSFIDETDVGILLGIGYNF
>NZ_AP018254.1|WP_096621099.1|1777182_1777641_-|pentapeptide-repeat-containing-protein
MLKKLLVALTLATPLVLAASVANAQNPEHIRQLLETRECMGCNLAGANLSGMHLIGADLRNANLQGANLQGVNLEGADLTGANLKGANLTEAFLTNVNMKAANLDRANLSRATIHDSNVYQASMKDMNITDADIFYTGIGIGGDSAEIPDWD
>NZ_AP018254.1|WP_096621100.1|1778182_1778791_-|rubrerythrin-family-protein
MKSNLITELPKINALKTPTSSAWVEQAISNLDTILLDHAQCERKAAGVALNLIFRYPSNAKMVRELTKIAREELEHFELVNQWLDRRNIPMRPLQPPPYGAGLKAQIRSQEPQRFLDSLLVSGLIEARSHERLGLIANYCPEPELAKFYHSLMASEARHFGVYWILADTYFDRELFLSRLDELAVVESELLAHLHPEPRVHS
>NZ_AP018254.1|WP_096621101.1|1779223_1779571_-|hypothetical-protein
MARYTCSFVLSISLDDLQPALVDLLYNCGLDVKYHTIDYIMAREIPGNVPFSKLVTVEALIDKTTATESETRMTIVIKNEELPLQIDNHCRQVFDFIKQEIEVSRYWNLIESIAG
>NZ_AP018254.1|WP_096621102.1|1779660_1782837_-|alpha-mannosidase
MTEQLSLNDTKSIVDAINTLRGYVQVDLQSGWRLTTEDILITEIIPDMMSTWPKGEKNDKGHLAWGSGREVRIFAQVIKIPTDLQGYQLRGLIARVGLVWWADSAQVYVNGKLAAEGDLFDFAPRILLTENAIPGEEFWVVVRLVSPGHDGGALMRSQLIFESADPRSPEPSLIATEVAVLQGYLQQFAPHLLPSLASAITGFDLDPTSGFFPQTLRELRNSLIPYKIEPMDGKIYLTGHAHLDMAWLWQVAETWRAAENTFKSVLALQQDYPNLIFSHSTPALYAWIEQNRPDLFIQIQTQVKEGKWEVTGGFWVEPELNIIAGESIVRQLLYGQKYTQAKFGHIATVVWVPDSFGFCWTLPQFMVQAGVEFFVTQKLRWNDTTKFPYGIFKWRSPDGSEITSYMSAPIGEGIEPVKLAAYHREWQTQTGIKDALWLTGIGDHGGGPTRDMLEVAARWNNSPVFPEMTFTTVENYLRQILSQPTTSPLPVWNDEIYLEFHRGCYTTHADQKRLNRRCETLLFTAELFASLSTILTSSDYPQTPLETAWKKLLFNQFHDILPGSSIPEVYSDAEPEWEAIQSIGNQVLHQALHQLYHHIPLPPPPTTDAIAIIVFNPLNWTRSEVVEISLPNHIHHPCISTTDGQTLPIQQQNPHQVHFIAPDIPPIGYKILWLSPGQPPTTISPPSEFILENSYLRVTVDPETGDLTSIFDLVNHQEILSAPGNQLQAFVDAGQYWDAWNIDPNYHHHPLPPPQLQSISWSAWGAVQNTIRVIRKIGTSEFCQDYTLPANSPILKIHTTVDWKERHVLVKAAFPLTISNNFATYEIPCGTIQRSTNPQTPQEQAKWEVPTLRWADISQTNYGVSLLNDCKYGYDATPNQLRITLLRGSTWPNPHADLGLHEFTYAIYPHLHSWEQANTVHRSYELNTPLSVLVGETPSFHPPDSITNTPPDSQSFIQLSAENIIIMAFKAADSAVDTTQDPAHQNTFILRCYECHNQTSNFKITNNLGLTCTQTVDILERPTSIPEFSSVQQNLTIQPGKIYSLKLQGKPSPNLKRR

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Crispr_ID: NZ_AP018254_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_21

1949484-1949751

Orphan

Consensus_repeat	Method
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACT	PILER-CR
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CRT
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_AP018254_21

>merge|NZ_AP018254|21|1949484-1949751|PILER-CR,CRT,CRISPRCasFinder
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCCCTAGAACCGTTCATCAGCTGACTCATCTGGGCTGGCTGATGAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCTATTAACAGTGCTATCTGTCTTAAAGCAATATTAACGTTGGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACGTCCCCAAGTAACTGTGCCAAACATTTGGCACAGTGGAGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|21|6|1949484-1949751|PILER-CR
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CCCTAGAACCGTTCATCAGCTGACTCATCTGGGCTGGCTGATG
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTATTAACAGTGCTATCTGTCTTAAAGCAATATTAACGTT
GGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GTCCCCAAGTAACTGTGCCAAACATTTGGCACAGTGG
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|21|5|1949484-1949751|CRT
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CCCTAGAACCGTTCATCAGCTGACTCATCTGGGCTGGCTGATG
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTATTAACAGTGCTATCTGTCTTAAAGCAATATTAACGTT
GGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GTCCCCAAGTAACTGTGCCAAACATTTGGCACAGTGG
AGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

>NZ_AP018254|21|21|1949485-1949751|CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CCCTAGAACCGTTCATCAGCTGACTCATCTGGGCTGGCTGATGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	CTATTAACAGTGCTATCTGTCTTAAAGCAATATTAACGTTG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC	GTCCCCAAGTAACTGTGCCAAACATTTGGCACAGTGGA
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621210.1\|1944940_1945714_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370867
NZ_AP018254.1\|WP_096621209.1\|1940785_1942198_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621219.1\|1956684_1957476_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|224429
NZ_AP018254.1\|WP_096621205.1\|1936303_1936609_+\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|176958
NZ_AP018254.1\|WP_096621217.1\|1954847_1955480_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_AP018254.1\|WP_096621213.1\|1951594_1952467_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|237636
NZ_AP018254.1\|WP_096621215.1\|1953757_1954219_+\|divergent-PAP2-family-protein	unknown	unknown	gnl\|CDD\|224874
NZ_AP018254.1\|WP_096621214.1\|1952680_1953607_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_AP018254.1\|WP_096620005.1\|1949891_1951250_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|373239
NZ_AP018254.1\|WP_096621206.1\|1936616_1937540_+\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|179455
NZ_AP018254.1\|WP_172892767.1\|1947729_1949478_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|236901
NZ_AP018254.1\|WP_096621208.1\|1938805_1939897_-\|threonine-synthase	unknown	unknown	gnl\|CDD\|236013
NZ_AP018254.1\|WP_096621207.1\|1937769_1938423_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370684
NZ_AP018254.1\|WP_096621220.1\|1957739_1959266_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|109787
NZ_AP018254.1\|WP_096621216.1\|1954350_1954632_+\|TatA/E-family-twin-arginine-targeting-protein-translocase	unknown	unknown	gnl\|CDD\|184859
NZ_AP018254.1\|WP_096621211.1\|1945956_1947312_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376559
NZ_AP018254.1\|WP_096621218.1\|1955641_1956421_+\|G-D-S-L-family-lipolytic-protein	unknown	unknown	gnl\|CDD\|238866
NZ_AP018254.1\|WP_096626002.1\|1940348_1940534_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626004.1\|1942626_1944288_+\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962
NZ_AP018254.1\|WP_096621221.1\|1959538_1960147_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621210.1\|1944940_1945714_+\|hypothetical-protein	gnl\|CDD\|370867	pfam10186, Atg14, Vacuolar sorting 38 and autophagy-related subunit 14. The Atg14 or Apg14 proteins are hydrophilic proteins with a predicted molecular mass of 40.5 kDa, and have a coiled-coil motif at the N-terminus region. Yeast cells with mutant Atg14 are defective not only in autophagy but also in sorting of carboxypeptidase Y (CPY), a vacuolar-soluble hydrolase, to the vacuole. Subcellular fractionation indicate that Apg14p and Apg6p are peripherally associated with a membrane structure(s). Apg14p was co-immunoprecipitated with Apg6p, suggesting that they form a stable protein complex. These results imply that Apg6/Vps30p has two distinct functions: in the autophagic process and in the vacuolar protein sorting pathway. Apg14p may be a component specifically required for the function of Apg6/Vps30p through the autophagic pathway. There are 17 auto-phagosomal component proteins which are categorized into six functional units, one of which is the AS-PI3K complex (Vps30/Atg6 and Atg14). The AS-PI3K complex and the Atg2-Atg18 complex are essential for nucleation, and the specific function of the AS-PI3K apparently is to produce phosphatidylinositol 3-phosphate (PtdIns(3)P) at the pre-autophagosomal structure (PAS). The localization of this complex at the PAS is controlled by Atg14. Autophagy mediates the cellular response to nutrient deprivation, protein aggregation, and pathogen invasion in humans, and malfunction of autophagy has been implicated in multiple human diseases including cancer. This effect seems to be mediated through direct interaction of the human Atg14 with Beclin 1 in the human phosphatidylinositol 3-kinase class III complex.	0.00151336
NZ_AP018254.1\|WP_096621218.1\|1955641_1956421_+\|G-D-S-L-family-lipolytic-protein	gnl\|CDD\|238866	cd01828, sialate_O-acetylesterase_like2, sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	5.811e-46
NZ_AP018254.1\|WP_096621221.1\|1959538_1960147_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.00143e-13
NZ_AP018254.1\|WP_096621205.1\|1936303_1936609_+\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|176958	CHL00015, ndhE, NADH dehydrogenase subunit 4L.	2.18314e-50
NZ_AP018254.1\|WP_096621217.1\|1954847_1955480_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	2.57853e-101
NZ_AP018254.1\|WP_096621215.1\|1953757_1954219_+\|divergent-PAP2-family-protein	gnl\|CDD\|224874	COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown].	4.48957e-69
NZ_AP018254.1\|WP_096621214.1\|1952680_1953607_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	6.64643e-97
NZ_AP018254.1\|WP_096621213.1\|1951594_1952467_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|237636	PRK14186, PRK14186, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	1.16815e-170
NZ_AP018254.1\|WP_096621206.1\|1936616_1937540_+\|NAD(+)-kinase	gnl\|CDD\|179455	PRK02645, ppnK, NAD(+) kinase.	0
NZ_AP018254.1\|WP_096620005.1\|1949891_1951250_+\|IS4-family-transposase	gnl\|CDD\|373239	pfam14706, Tnp_DNA_bind, Transposase DNA-binding. This domain occurs at the C-terminus of transposases including E. coli tnpA. TnpA encodes a transposase and an inhibitor protein, the inhibitor only differs from the transposase by the absence of the N-terminal 55 amino acids, which includes most of this domain. This domain consists of alpha helices and turns, and functions as a DNA-binding domain.	2.13308e-21
NZ_AP018254.1\|WP_096621208.1\|1938805_1939897_-\|threonine-synthase	gnl\|CDD\|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NZ_AP018254.1\|WP_096621207.1\|1937769_1938423_-\|hypothetical-protein	gnl\|CDD\|370684	pfam09778, Guanylate_cyc_2, Guanylylate cyclase. Members of this family of proteins catalyze the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.	5.31994e-09
NZ_AP018254.1\|WP_096621220.1\|1957739_1959266_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|109787	pfam00743, FMO-like, Flavin-binding monooxygenase-like. This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.	1.15341e-51
NZ_AP018254.1\|WP_096621216.1\|1954350_1954632_+\|TatA/E-family-twin-arginine-targeting-protein-translocase	gnl\|CDD\|184859	PRK14857, tatA, TatA/E family twin arginine-targeting protein translocase.	5.68542e-40
NZ_AP018254.1\|WP_096621211.1\|1945956_1947312_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376559	pfam01520, Amidase_3, N-acetylmuramoyl-L-alanine amidase. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls.	6.41421e-28
NZ_AP018254.1\|WP_172892767.1\|1947729_1949478_+\|PAS-domain-S-box-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.22375e-62
NZ_AP018254.1\|WP_096621219.1\|1956684_1957476_+\|TPM-domain-containing-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	8.29895e-47
NZ_AP018254.1\|WP_096626004.1\|1942626_1944288_+\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	9.88124e-19

>NZ_AP018254.1|WP_172892767.1|1947729_1949478_+|PAS-domain-S-box-protein
MKKVLLLLRKLPITLLLLVIITILNAYLFYFQVTAISQNQKLLQQSVQGLTDLEGLRSAFKQGELTQHSYLVTGGEQDLEKYQQAVTAVLRNLNNLRQRESVEGTVSLQQQLTATVDRWNREIELSQSQFPTGVRGMGGGQQNQEIYTGLERISANLHRRSQSYLQKSRYGLNLSLTTYAIAMSANMGLVGLLLYHLHLAWSRHHHHQMKLQQQGILLAMTSEGMLIHDLQYRICEWNQGAERLYGWKRERVLGASIVELLYPHDLSLSAQAMSKTLATGCWQGEMQQINSRGEIIVVKSSWRLLYNEDGNPLSVLVTNREITEQKRLERIMLRSQRLEMMGTLAGGVAHDLNNILSPILLSVQLLEMKLGDPEHQKLLKTLEKNVKRGANLVKQVLSLARGIESQLSQIDIYTTLADVEEFIHETFPKCICFHSHIAKNLPTIHGNNTQLYQVLMNLVINARDAMPEGGTIELAAQIVEVSCYKPQISIKPGTYLVITVKDSGIGMTPQIRDRIFEPFFTTKQANRGSGLGLYSAQLIIQNHGGIIDVETQIGKGTCFHVYLPVDVCGEYPAHLNPMVINN
>NZ_AP018254.1|WP_096621211.1|1945956_1947312_-|N-acetylmuramoyl-L-alanine-amidase
MGRIFISAGHGGRESWGIDPGTIAGGTTEAREMILLRDLIVTELRTRNQEVLSVPDDLSARGTIDWINSRSRPRDVALEIHADAAPNPSVRGASVFYITNNNERRQNAELLLTALLRRVPQLPNRGVRPDSESGLGSLVFCRQVRVASLYMQVGFLTSPEDRALLQNRRRDFAGGIAEGLVAWSQIVDPDSAPSPGETVYPQINININGQNYPERGILVNGNAYIPVDLADRLQIDLSRIPTVRRITYRQVVYIKAIELRDFNISVGWDSNTRTVIIKSILTICPGQIDRIMGTGNTSEVQLQIFLRNNNEAALTRFPDLPRLYREEAAVEGVNHDIAFCQMCVETGFLRFGGDIRPEQNNFAGLGTIGGGAEAASFESARIGVRAHIQHLKAYASLEPLVQEVVDPRFRFVTRGVAPLVGQLSGRWSADTQYGQRIMAMVKRLYESAGLL
>NZ_AP018254.1|WP_096621210.1|1944940_1945714_+|hypothetical-protein
MYLNFFVGSSLSIVLLILVAFGLLQWLHIPTGNFLDWVIGGASFWWLLVIVTVPWNIHFQAKAVFAEGEQSQERGIAVDPNQKAYVAKLARRSLIVAIVLHVLSAIGLYTLAVTGISAVGYISSGAALLLTGLRPAISAYEYLSRRLNLIQSEWTYPREDVVELRNRVSILENNIEQVQRQLNPDFDDSIPSKQKDYINETRRELAQLAAKIEQLRATNETAHEQLSRENRQAIAQLSTDGQFLDHVREIIRFFKEA
>NZ_AP018254.1|WP_096626004.1|1942626_1944288_+|iron-uptake-porin
MTKQRVQEDETSGKVGKDWLETNVDQLSSPSFLSGELKSETDSPTMSQVTSVSQLSDVQPTDWAFQALQFLVERYGCIAGYPNGTFRGNRGMTRYEFAAGLNACLNRVNELIDTATASLASREDLAKLQKLQEEFGAELATLRGRIDRLEARTAEIAANQFSTTTKLFGIAIVGVQGTFSNRGDINPRDGVKDTDDAATNINVVNLNQLLLTSQFSPRDYLVTGLIAGNGATGWGEQVNGEVNYDGLLAYEYPTNNSLVLSDLRYHRLLTDKFAIAIGSTTVNMTTTFRGPNRFENAATGSVSFASQRNPILNIGFTGQAGIAFDWQFAKRASLQGVYSSLNAGNPGLRAGLFDGNTTTAVQLLLTPTDTIDTSIYYVNNYSSGGCLLAFVGDDCLTAVNANTNRREPVQTNAIGATINWQLSPRFTLGAWGGYSNSYIPGKSGNVERTNWMVYMNFPDLFKKGNLGGIYIGQPPKITHSSLPVGNNIPDIINGGLGEAGGQPGTTTQIEAFYRFRVTDNMSITPGIIHIIEPGHSPNSDSITTGVLRTSIFF
>NZ_AP018254.1|WP_096621209.1|1940785_1942198_-|hypothetical-protein
MAKPASKKSAVNTSIVKFSANKAPKKSSVSGCLSFLFAIAILFSATGLIVGLGWLGFMYIFQPHQVTWINQLLPNWAQVPWQGERPKSLTDINSELQKQGEIAGKFIPLAEDKGRYLLPIYTQRPNCSSDCREITELRLYEVSNDAEFESQQQKYYYLLSQTSITGPEESFVLAPLANATNEHPGSSINLPLTEIDRFSPRSAPPGFWFYLHGSRADGIHHLTYGQIFFYNPERDRLQQMLVWTSPQGQIPQWQEITGGGMQELLINQSVGLEPQFRVFQVKTAKSSVYPTSLEEILLQPPAWNDKAFTNALQVARSGLWSPADKWLQFIQKQKKSKIPARAQAQIALVRLHAEQTTIQADADWASPGQAVLANLIDGRWGNALRILQNSGTNVSEISRLLKADGGRLGDRVRIALGINPKRSEVQIWGALIIAAQTNEKRANAWLQSQPHVTEQTRKEVQIWLQRLRGG
>NZ_AP018254.1|WP_096626002.1|1940348_1940534_+|hypothetical-protein
MTTSSLSKPEAPVEQANQLTKTCYQADQQVKFMYLQAEIDCLLEELKNLKRQRCESENVHG
>NZ_AP018254.1|WP_096621208.1|1938805_1939897_-|threonine-synthase
MTVSLTVAKSHRQPWPGLIEAYRPYLPVSDRTPVVTLLEGNTPLIPVPNIAAHIGKQVRVFVKYDGLNPTGSFKDRGMTMAVSKAKEAGAQAVICASTGNTSAAAAAYARRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIQGNFDRALEIVREFAESYPVTLVNSVNPYRLEGQKTAAFELVDILGNAPDLLCIPVGNAGNISAYWMGFCEYHQQGKCDRLPKMMGFQASGSAPLVNGSPVAFPETIATAIRIGNPASWDKAIAVKDASQGEFNAVTDEEILSAYRLLASEEGIFCEPASAASVAGLLKVKDQVPEGATIVCVLTGNGLKDPDTAIKHSQSQFHQGIPADIKSVAAVMGF
>NZ_AP018254.1|WP_096621207.1|1937769_1938423_-|hypothetical-protein
MTQIPFVANWDDIHCFQACLSMVLQTFSPTQTLNHSQLEEVTGKRDTKTTWHTQGILYLLDQGFEVICQKDFDYQRFATLGETYLYERFGLQLGRVITKFSDIPSEITYAKQLISRINISPYNPTIQDITTFLNSGYLIICLVNLCKLNNQIGYDPHFILIYNIQNQEVYCHDPGPPAIASRKIPIEEFETAWSSPTKRDRNLIAIKYPTTLKIIRN
>NZ_AP018254.1|WP_096621206.1|1936616_1937540_+|NAD(+)-kinase
MDLNQVIIAYKARDPQSKRWAEMCAKQLENRNCQVLMGPSGPKDNPYPVFLASANHDIDLALVLGGDGTVLTSARHLAPAGIPILGVNVGGHLGFLTESVEEFQDTEAIWDRLIEDRYAVQRRMMLQAAVFEGHGSSSEPVSERYLALNEMCVKPASADRMITSILEMEIDGEVVDQCVGDGLIVSTPTGSTGYTVSANGPIMHDGMEAITVTPICPMSLSSRPLILPPGSVVSIWPLGDNDLSTKLWTDGVLGTSIWPGHRVDVRMAECRAKFIILRENNSYYQTLREKLLWAGTRVRYSSTNHSN
>NZ_AP018254.1|WP_096621205.1|1936303_1936609_+|NADH-quinone-oxidoreductase-subunit-NuoK
MQLEYFLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTAIKGQIFTVFVITVAAAEAAVGLAIVLAIYRNRDTVDMEQFNLLKW
>NZ_AP018254.1|WP_096620005.1|1949891_1951250_+|IS4-family-transposase
MEKWAARELKHLDLGDKRRNKRLIKMVEDLAAQPTSSVPQACGSVAATTAAYDLWSSPYIKPSDISNGHIKSTIERAKEHEIVLAIQDTTNMDVTSHPATEGIGYLDQRKSLGLKVHSTLLSSIKGVPLGVIDQQVWSRNIEDLGIAKTRRKRQTEEKESQRWLEGLERTNKLLPEKIKIITVADSEADIFDLFNQERPENSHLLIRGTHNRKVSHTANYLHEAIRSSPTQGEVEVKVRRNPERPERIAKLTIRYETVEIEVPKNKLGRSLCKPVKLQVILAEEKSPPSEIKPISWLLLTTLEINSLEDAVKCVEWYTYRWLIERYHYTLKSGCRIEELQLETGKRLSMALATYSIVAWRLLWLTYQARDNPEQSCETVLTTVEWQSLCVSVNKNPIPPDQPPTLREAVRMIARLGGFLGRKGDGEPGVKTIWRGLRRLHDIAVTWKLAHQI
>NZ_AP018254.1|WP_096621213.1|1951594_1952467_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MNAPTAKILDGKALAAKIHEELVYKISQAKDKIGRPPGLAVLMVGDNPASAAYVRGKERACAKIGISSFGKHFPTETSFEELSDAIAELNQDERVDGILVQLPLPNHLDSVALLHQILPEKDADGLHPMNLGHLVRGEPGLRSCTPAGVMRLLHEYNIPIAGKHAVVVGRSILVGKPVAMMLLAENATVTVAHSQTVNLSQITQTADILIAAVGRSQLISSQMVKPGAVVVDVGINRIVDASGNALLVGDVDFESVCRVAGYITPVPGGVGPMTVAILLQNTVDSYLQKV
>NZ_AP018254.1|WP_096621214.1|1952680_1953607_+|polyprenyl-synthetase-family-protein
MVAAENIQTNQTLTKFDLKGYLKERKALCEAALDASLPVQYPEKIYESMRYSLLAGGKRLRPILCLATCEMMGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLTYAFEYPVTQTKNVPAERLLKVVAKLAKAVGAEGLVGGQVVDLECEGKTDTSLETLNYIHNHKTAALLEACVVCGGILAGASEEDIERLSRYSQNIGLAFQIIDDILDITATQEELGKSVGKDIAAQKVTYPSLWGIEKSRQQAEELIAAACQELQPYGEAAQPLIAIAHFITNRSN
>NZ_AP018254.1|WP_096621215.1|1953757_1954219_+|divergent-PAP2-family-protein
MQDIGDIFQNRVLLVALVACIIAQAIKLIVEIIKNRKLDIRVLVTTGGMPSAHSALVTALAAGVGQTIGWQTPDFALAMVFAIIVMYDAAGVRQAAGKQARILNQMMDELFDDKHEFSQDKLKELLGHTPVQVIAGSALGVMISWLARSAYVF
>NZ_AP018254.1|WP_096621216.1|1954350_1954632_+|TatA/E-family-twin-arginine-targeting-protein-translocase
MNVFGIGLPEMALIMVVALLVFGPKKLPEIGRSLGKAIRGFQEASREFQEEFQREANQIQESVKTTAEIEPKQISPATTEEVKTEVSETEKVS
>NZ_AP018254.1|WP_096621217.1|1954847_1955480_+|aminoacyl-tRNA-hydrolase
MSQATEKKLVIPQLIVGLGNPEPKYDDTRHNIGFAAIDALAKTWGISLTENRKFQGEFGEGMAINGEKIRLLKPLTYMNRSGQSIVAVTQWYKILPESVLVIYDDMDLPIGKTRLRLSGSAGGHNGMKSAIAHLHSDNFPRLRIGIGKPKKDGDSGTVSHVLGKFSQEEANLMKEVLGFVVECTELCLKQGVEMAMNRCNSKVISLNQDS
>NZ_AP018254.1|WP_096621218.1|1955641_1956421_+|G-D-S-L-family-lipolytic-protein
MSTNIINIIIYSSLALNLIFSLILLTLLISKGGWKYLTQKIWNFSNHQQLNYDNTFTPYYIHKSHQFEILANPHHQKIVLLGDSLTDEGEWVELLANPHVINRGISGDTTIRVWKRISAIIKIQPQQLFLMIGVNDLVNTNKSLTQITQDYRQLIQTITTQLPSTEIFLQSIIPVNTTLATFLRTRPRPQVSQDILTLNQNIQAIAQEFQCEYLDIYSHLADEHHQLLPECTTDGIHLNGEGYKIWAGILKQRIQNPSG
>NZ_AP018254.1|WP_096621219.1|1956684_1957476_+|TPM-domain-containing-protein
MKPFLHKKSRTQQVCEHQGNLQPNTLGAKFRPWQQIFLSAIITGIMALSLFVAPAFATGVYEIPPLTPDTWVVDEGEVISRINEGKISSALADLAAKTGNQVRFVTVHRLDYGETAESFTKALFKQWFADEQAQANQVILMLDTVTNNSAIVAGEGVKSLLTDEIAASVANETLLVPLRDGDKYNQAFLDASDRLVAVLSGQEDPGPPQVKDDIQVEGTYMSAEESKEKRGNSTAWVVGLLIAATIIPMATYYIYLVFAPNSQ
>NZ_AP018254.1|WP_096621220.1|1957739_1959266_+|NAD(P)-binding-domain-containing-protein
MKVQTIGIIGAGISGLVAAKTFLQAGYKVTVFEKLANLGGVWEKSRTYPGLTTQNNRDTFCFSDYPMPQTFAEWPTAAQMRQYLQSYADDFGVTEHILFNTEVIHISDESLESSGNWKVRVNTGGQEKIYEFDFVLVCNGLYNVPKIPQIPGIDEFTNAGGQVIHSTEFNQIEKIKNKRVIVVGFGKSASDIASIAAENASKCDLVYRQAIWRLPKYLLGKINIKNILLTRFSESWLPYRELRGGEKLLHTIGKPIVWAFWRTNEMVIRQQLRLDECNMLPNLPLNAVDCSSGIAGDNFFEYVRTGKIIAHKTKITRYTSEGVELENGEKIKADIVIFGTGFRQDISFLPEKYRQKILNNQGHFQLYRHLIHPEIPHLGFVGYNTSFFSQLTSEVGAWWLLDYIEGYVKLPSQSEMEAEIQADYVWMQKQLNKTNDASGACISPFSLRHVETLLEDMGVDTKKDLWKSITQVMQPLDPTIYNEVRQQIQSKRRTEKEHESMKKLVSLN
>NZ_AP018254.1|WP_096621221.1|1959538_1960147_-|HEAT-repeat-domain-containing-protein
MDALFEQLKHPNPNLRDRAMLEIAAQRDENTIPRLISILDDEDVVYRRAAVQALGVIGTDSIPPLENLLLHSDNPTVRASCAKVMAQVAVNHPDASFPSTGITALQQATNDPNPVVHIAAVMALGEIGSPAFDVLVDTLKTTENVTVAVAIVNALGDSGNPQAVEILTQLSQDETIDEYIRESAISALPRLDQVINYKNRTW

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Crispr_ID: NZ_AP018254_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_22

2040037-2040148

Orphan

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGATTAATTTGAATTGCAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_22

>merge|NZ_AP018254|22|2040037-2040148|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTAATTTGAATTGCAATCTAGTATTTGCAACCATCGAACAATAAAAAGTGTGGAGGTTTAAATCCCTAATAGGGATTAATTTGAATTGCAAT

>NZ_AP018254|22|22|2040037-2040148|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTAATTTGAATTGCAAT	CTAGTATTTGCAACCATCGAACAATAAAAAGTGTGGAG
GTTTAAATCCCTAATAGGGATTAATTTGAATTGCAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621266.1\|2034117_2034474_-\|YtxH-domain-containing-protein	unknown	unknown	gnl\|CDD\|227313
NZ_AP018254.1\|WP_096621268.1\|2035666_2036440_+\|serine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|223975
NZ_AP018254.1\|WP_096626020.1\|2036586_2038185_+\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|235463
NZ_AP018254.1\|WP_096621273.1\|2041984_2043124_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274465
NZ_AP018254.1\|WP_096621267.1\|2034853_2035183_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621275.1\|2047361_2047649_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|179494
NZ_AP018254.1\|WP_096621272.1\|2040429_2041434_-\|protochlorophyllide-reductase	unknown	unknown	gnl\|CDD\|180983
NZ_AP018254.1\|WP_096621276.1\|2047620_2048409_-\|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181384
NZ_AP018254.1\|WP_096626022.1\|2045495_2046380_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_AP018254.1\|WP_096621280.1\|2054296_2055106_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|184588
NZ_AP018254.1\|WP_096621269.1\|2038476_2038710_+\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_AP018254.1\|WP_096621265.1\|2031870_2033403_-\|SagB/ThcOx-family-dehydrogenase	unknown	unknown	gnl\|CDD\|380318
NZ_AP018254.1\|WP_157780678.1\|2039420_2039990_+\|peptidase	unknown	unknown	gnl\|CDD\|227836
NZ_AP018254.1\|WP_096621263.1\|2028041_2028497_-\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_AP018254.1\|WP_096621277.1\|2050198_2051557_+\|ATPase	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096621262.1\|2026103_2028023_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_AP018254.1\|WP_096621264.1\|2029011_2031432_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_AP018254.1\|WP_096621274.1\|2043912_2045289_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237677
NZ_AP018254.1\|WP_096621279.1\|2052790_2053372_+\|nucleoside-monophosphate-kinase	unknown	unknown	gnl\|CDD\|238713
NZ_AP018254.1\|WP_096621278.1\|2051770_2052301_-\|P-loop-NTPase-family-protein	unknown	unknown	gnl\|CDD\|168945

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621266.1\|2034117_2034474_-\|YtxH-domain-containing-protein	gnl\|CDD\|227313	COG4980, GvpP, Gas vesicle protein [General function prediction only].	8.22049e-26
NZ_AP018254.1\|WP_096621268.1\|2035666_2036440_+\|serine-O-acetyltransferase	gnl\|CDD\|223975	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism].	4.40821e-97
NZ_AP018254.1\|WP_096626020.1\|2036586_2038185_+\|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl\|CDD\|235463	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase.	0
NZ_AP018254.1\|WP_096621273.1\|2041984_2043124_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274465	TIGR03169, selenide_water_dikinase_putative, pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.	1.46338e-170
NZ_AP018254.1\|WP_096621265.1\|2031870_2033403_-\|SagB/ThcOx-family-dehydrogenase	gnl\|CDD\|380318	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC. This family is the oxidase domain of NRPS (non-ribosomal peptide synthetase) and other systems that modify polypeptides by cyclizing a thioester to form a ring. These include EpoB, part of the epothilone biosynthesis pathway; TubD, part of the tubulysin biosynthesis pathway, MtsD, part of the myxothiozol biosynthesis pathway; IndC, part of the indigoidine biosynthesis pathway and TfxB, part of the trifitoxin processing pathway. All are FMN-dependent and oxidize the product of the cyclization of thioesters in short polypeptides.	7.43988e-52
NZ_AP018254.1\|WP_096621275.1\|2047361_2047649_-\|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl\|CDD\|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	1.06063e-41
NZ_AP018254.1\|WP_096621272.1\|2040429_2041434_-\|protochlorophyllide-reductase	gnl\|CDD\|180983	PRK07453, PRK07453, protochlorophyllide reductase.	0
NZ_AP018254.1\|WP_096621276.1\|2047620_2048409_-\|energy-coupling-factor-ABC-transporter-permease	gnl\|CDD\|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	4.42594e-124
NZ_AP018254.1\|WP_096626022.1\|2045495_2046380_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	6.37131e-93
NZ_AP018254.1\|WP_096621280.1\|2054296_2055106_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|184588	PRK14243, PRK14243, phosphate transporter ATP-binding protein; Provisional.	2.28326e-180
NZ_AP018254.1\|WP_096621269.1\|2038476_2038710_+\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	1.04656e-12
NZ_AP018254.1\|WP_157780678.1\|2039420_2039990_+\|peptidase	gnl\|CDD\|227836	COG5549, COG5549, Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones].	9.12873e-54
NZ_AP018254.1\|WP_096621263.1\|2028041_2028497_-\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.48054e-69
NZ_AP018254.1\|WP_096621277.1\|2050198_2051557_+\|ATPase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.32422e-50
NZ_AP018254.1\|WP_096621262.1\|2026103_2028023_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	5.73674e-79
NZ_AP018254.1\|WP_096621264.1\|2029011_2031432_-\|PAS-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	2.07361e-62
NZ_AP018254.1\|WP_096621274.1\|2043912_2045289_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237677	PRK14333, PRK14333, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_AP018254.1\|WP_096621279.1\|2052790_2053372_+\|nucleoside-monophosphate-kinase	gnl\|CDD\|238713	cd01428, ADK, Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for homeostasis of adenosine phosphates.	2.19465e-60
NZ_AP018254.1\|WP_096621278.1\|2051770_2052301_-\|P-loop-NTPase-family-protein	gnl\|CDD\|168945	PRK07414, PRK07414, P-loop NTPase family protein.	8.99023e-104

>NZ_AP018254.1|WP_157780678.1|2039420_2039990_+|peptidase
MPTKLSQWQDKGNNGDYFTDIQATKFGYLIWSKFPVKIYIETPNLNTNLAETWVKAVVQTVQEWNEYLPLQIISTPHQADIKIIRKVPPLQGNPPRARSALATYELYIQDNFLRHKFTILLSPSQSGKFLQAASRHELGHALGIWGHSSNPNDALYFSQVANPPQISPRDINTLKRIYQQSTSLGWKLG
>NZ_AP018254.1|WP_096621269.1|2038476_2038710_+|preprotein-translocase-subunit-SecG
MTITNVIQGIWTISALGLVVLVLLHSPKGDGIAAIGGQAQLFSSTKSAENTLNRITWALAVIFLSLTVVLSAGWLPK
>NZ_AP018254.1|WP_096626020.1|2036586_2038185_+|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MTKAPVAPVVLVILDGWGYCEETEGNAIAAANTPVMDSLWAAYPHTLIRTSGKAVGLPEGQMGNSEVGHLNLGAGRVVPQELVRISDAVEDGSLNQNPALVNICQEVLSRNGKLHIVGLCSEGGVHSHLSHLFGLLDLAKAQGMQQVCIHAITDGRDTPPTDGINSIGLIQNYIERIGIGRIVTISGRYYAMDRDRRWDRIERAYRVMTEDDKIDGRTAMELIQSSYDEGVTDEFIIPTRIAPGAVVNGDGVIFFNFRPDRARQLSQAFVSPDFDGFERSQITPLSFVTFTQYDPDLPVNVAFEPQNLSNILGEVVSKHGLKQFRTAETEKYAHVTYFFNGGLEEPFPGEDRELVNSPMVATYDRSPQMSADAVTDVALAAIAKQIYSLVVINYANPDMVGHTGQIPATIEAIETVDRCVGRLVDGIGKVGGTVIITADHGNAEYMLDESGNPWTAHTTNLVPLILIEGERAKIPGHGNELQLRDDGKLADIAPTILQILQLPQPPEMTGRSLVKSADYDLQCDRTPVRLLL
>NZ_AP018254.1|WP_096621268.1|2035666_2036440_+|serine-O-acetyltransferase
MFSTLITDFRIIFERDPAARNWLEVLFCYPGLQALLFHRPAHWLYKIGVPFLPRLISHIARFLTGIEIHPGATIGKGVFIDHGMGVVIGETAIVGDYALIYQGVTLGGTGKESGKRHPTLGENVVVGTGAKVLGNIQIGNNVRIGAGSVVLRDVPSDCTVVGIPGRIVYRSGVRVNPLEHASLPDAEAQAIRALVDRIEQLEQQIAELQKSQLPVPVVAGEQMIESKGVQGIGDSEHRDRCLIKDRAIEEFLDGSGI
>NZ_AP018254.1|WP_096621267.1|2034853_2035183_-|hypothetical-protein
MVMFVIALNILISLIFFYAAWRIWQIKQRLANIADALTRAERSTYGVLNGAPNSIYQYQRHASRLRIAHRSLKVQVAKLRQVLGIVMLGQQLWQRYARRMVVSNQRLKV
>NZ_AP018254.1|WP_096621266.1|2034117_2034474_-|YtxH-domain-containing-protein
MSNNRSGEFIGGLMLGATIGALAGLLVAPRTGRETRQLLKKSADAIPELAEDLSTSVQLQADRLSSKALRNWDETLDRLREAIAAGVDAGLRESQALKRESRKSTVDTITENNNSIDG
>NZ_AP018254.1|WP_096621265.1|2031870_2033403_-|SagB/ThcOx-family-dehydrogenase
MPELRLSIAQHYHERTKYDPETIASKGKALDWSKQPVPFKEYKIGSSVDLKPFIQQAPETFADDAEGQWWRRLSRLLFCSYGLTAKMPSMGSAVYLRAAPSAGGLYPAEVYLVSRGTPLLPPGLYNYQSRTHSLLHFWESDVWTNLQDACLWHSSLENTQIALVITAVFYRSSWRYEDRAYRWIFLDTGHLLGNIELASAINDYRPHLIGGYVDQAIDDLLYIDTEKESAIAVLALADLLDIKQNLPIGRTALPSATETEYPYIPDGQLLYYFHRVTQIHPGTTGNLNLPEIKQQKSLEDKYNFPFCQKIPTATTPIDWGTNLEKLEVTILKRRSTRAYSGENLTFDELKYLLDFTYQPQNYLDQSLDIHPDYFDLNLIQTFIAVSGVDGLESGCYYYAPQAQELRQIRFKNFRRELHYLCLGQELGRDASMVIFHTADLKAAISQYGDRVYRYLHMDAGHLGQRLNLAAIRLHLGVSGIAGFFDDQVNEVLGIPTDEAVLYITTVGRPR
>NZ_AP018254.1|WP_096621264.1|2029011_2031432_-|PAS-domain-containing-protein
MNSQILIADDDVLIRLQLRELLESVGYTVIEASNGVEALKMYQDLHPDMVLLDAMMPEMDGFECCRRLRELASKDELPILMVTALYDVESVEKAFAVGTTDYITKPIQWLVLRQRVQRLLHGSQTLKQLKTQTRHAEYRESQLRMVLEAAQMGTWEWDINSDRMVWSDNLIALLGDGELPDTLEAFLMQVHPQDRDSVRHQIQAAIASGGEYEIEFRMFSQKGDLHWIVSKGLVIRDGEGKPICLSGVDMDITERKLAESQLRLSEERFQILAKATNDAVWDWNLQTNTIWWNESVESLFGYGQAEVNVIGNEQWWSDHIHPQDRPRVVKDIFSAIDGNQNFWYGEYRFLRANGKYADILDRGYIVRDENGQPVRMIGAMMDITDRKQAQIELQRQNLRSQLFADISLKIRQSLQIEEILQTSVTEVQNLLQADRVVIIRFRSNGMLKVVQEAVVPGFVAVWGQDIFDPCFDEEYINKYRQGHISSIEDIYTADIQPCHVEFLQQFQVRANLVVPIFIHNQLWGLLIAHQCSSPRTWTDWETQLLRQLSDQIGIALAQAKLLEQETKQRQELARSNEELQNFAFIASHDLQEPLRKIKAFGDRLRINSQEALGEQGLDYLERMRNATERMQALIDDLLSLSRVTTRAQPFIEVNLTQLTQEVVSDLEVLIQQTNGTVEIDQLPNLNADPSQIRQLLQNLISNALKFHRPEVPPYVKIYYHQLTTGEGIEEYQIIIEDNGIGFDQKYVDRIFNIFQRLHGRHEYEGTGIGLAICRKIVERHQGTITAESQPGKGSKFIVTLPRNLPN
>NZ_AP018254.1|WP_096621263.1|2028041_2028497_-|response-regulator
MKGRQTTVRILLADDDDDDCMLAREALAESDGVIDLRVVSDGEELMDYLHHRGNYAIANLAPRPNLILLDLNMPKKDGREALQEIKGNEQLRRIPVVILTTSNAEEDVHRCYELGANSFIIKPFSFQDLVEVMRMINKYWFETVELPFEGL
>NZ_AP018254.1|WP_096621262.1|2026103_2028023_-|response-regulator
MDTPIRIILIDDDEDDYILTRDWVREFQGSQCVLEWISDYHAGMDALTQCHSDVYLIDYRLGEVTGLELLRTAIANGCDAPMILLTGQGDREIDIEAMKAGAVDYLEKSQLNSAILERAIRYAIERKKAEQKIRAQAALLNVATDAMFVCSLEGKILFWNPEAEKLYGVDAAKAIGQTTSQLWQERNPDILKVAHDTLMETGVWQGELEQINRHQQKIIVESRWTLVDEFEQTSPSILIVNTDITQKKLLESQILRTQRLESIGTLASGIAHDLNNVLAPILMTAQLLQSQLNDERSQRLLPIIINNAKRGANLVKQVLSFTRGIEGDRTVLQLKHVVQEIEQVIKETFPKSIELKIEVPPDLWVINGNATQLHQVIMNLCVNARDAMVNGGELRISLENCYLDANYTQMHLNASVGNYVCLTVSDTGSGIPPEFIDRIFEPFFTTKEIGKGTGLGLSTVQGIVQSHNGFIDVTSEIGQGSQFRVYFPADIHAEIKTETEPETYTGAGELILIVDDEEAIRDVTKTSLETHNYRAITARDGIQAIELYAQHRDEIAIVLTDMIMPQMDGLTTIRTLKKINPQVKIIAVSGLVPHQKSTNTQEIGVQAFLSKPYTAKQLLQTIDSLIRNQNQEYKVQNAP
>NZ_AP018254.1|WP_096621272.1|2040429_2041434_-|protochlorophyllide-reductase
MVTERKPTVIITGASSGVGLYAAKALANKGWHVIMACRDLRKAGEAAQAVGIPQGTYSLMQIDLGDLESVRRFAREFQASGRSLDAMVCNAAIYMPLLKEPLRSPEGYELTVTTNHLGHFLLCNLLLEDMKKSYYPDKRLVILGTVTHNPDEPGGKVYPRPDLGNFEGFAAGFKPPISMINGKKFEPVKAYKDSKVCNVLTMRELHRRFHESTGITFTSLYPGCVADTPLFRNHYPLFQKLFPLFQKYITKGYVSQDLAGERVASVVADPEFRQSGAYWSWGNRNSKQRQAFVQRVSSQARDDEKAVRMWELSAKLVGIADETVTAGTSAGVSV
>NZ_AP018254.1|WP_096621273.1|2041984_2043124_+|FAD-dependent-oxidoreductase
MRIVLIGGGHSHAIALWFFGKYPPVQGVELILISDCIQTPYSGMLPGHIAGFYTYQECHINLIHLARFARAKLCLDRVIGLDLHRNQVICAHNHPISFDVVCLDIGSTPAILTVPGALEYATPVKPIPQFLRSWSEFLTNISQRPQQPVNVGIVGGGAGGVELALTMQARLGKIIDSPANLHMHLFQRGMKIMPSHHPTVRCVLQSTLKKRGINIHLGASVVKLDSPVPPKVQIITKSGFSTECDRIFWVTHASAPTWLRDAGLATDAQGFVLVDETLQSISHSQVFATGDIASILNHPRPKAGVFAVRQGKPLYTNLCRLTEGKPLKNYIPQRQYLSLIGTGDKRAIASRGCFTLPPHPLIWWWKDRIDHRFMQRFSF
>NZ_AP018254.1|WP_096621274.1|2043912_2045289_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTTSKRSYHITTFGCQMNKADSERMAGVLEDMGFEFAADPNQADLILYNTCTIRDNAEQKVYSYLGRQAKRKHEKPDLTLIVAGCVAQQEGEALLRRVPELDLVMGPQHANRLKDLLQQVFDGNQVVATEAVHIMEDITKPRRDSSVSAWVNVIYGCNERCTYCVVPNVRGVEQSRTPEAIRAEIEELGRQGYKEITLLGQNIDAYGRDLPGTTPEGRHLHTFTDLLYFVHDVPGIERIRFATSHPRYFTERLIRACAELPKICKHFHIPFQSGDNEVLKRMARGYTHEKYRRIIETIRTYMPDAAISADAIVGFPGETEAQFENTLKLVEDIGFDILNTAAYSPRPGTPAALWEEQISEEVKSDRLQRLNHLVAIKAAERSQRYLGRIEQVLVEEQNPKDGSQVMGRTDGNRLTFFQGDINELKGQIVNVKITEVRAFSLTGEPVPVAQSVARLKIG
>NZ_AP018254.1|WP_096626022.1|2045495_2046380_-|ABC-transporter-ATP-binding-protein
MSWIILICLEILYVQFRCRTLLDFNHVSYKYFGSKQITINQLTLQVPAGKKCALIGQNGCGKTTLFLLANGLYKPLSGQIKWRGQPFAYTHYYLNHLRQKIGLVFQDPEHQLVASTVAEDISYGLCNLNLPLQEIKTRVEKALIDFELTELADTPIHHLSLGQKKRVSIADVMVLQPELLILDEPTAYLDIKHTRQLLSVLAKIHQSGTTLLMATHDLNLVYNWADWIFVMDQGQLILEGEPNYIFSQTQTLTDLELDIPLLAKIQGLSPTDLEIEPAILAQIKDKILQLAKKT
>NZ_AP018254.1|WP_096621275.1|2047361_2047649_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MNQSRNQVSNWLLVLGVVALVVAPLIIVRGSEFAGADGQAEEIIKQVKPDYKPWFEPILAPPGGETESLLFASQAGLGAGLIGYVIGFYRGRQRQ
>NZ_AP018254.1|WP_096621276.1|2047620_2048409_-|energy-coupling-factor-ABC-transporter-permease
MGKWGRRCVSLSLIAVLSCYLIISSTQPAYGMHIMEGFLPIPWAVFWWVVTLPFLILGMRSLSRITQENPQLKLLLALAGAFTFVLSALKMPSVTGSSSHPTGTGLGAVLFGPLVMSVLGTLVLLFQAVLIAHGGLTTLGANAFSMAIAGPFAAYWIYKLIVGITSQQRLAIFAAAALANLLTYVITSLQLALAFPASMGGVMASFAKFAGIFAYTQVPLSISEGLLTVLVWNWLESYNAQELELLRLIQPGKHESISQPSK
>NZ_AP018254.1|WP_096621277.1|2050198_2051557_+|ATPase
MNPSLMQDLSIFQTVRSGDFGLEPLVVSPSVLLSMIRAHMDVLIDEKIPATIFAKLPDGKLWRGEIQRYLIAVKDNSKIYTLSQKTEVINPIASNHYPVAIPKNGKLRREYFFLVLSPRFSSLVAIIRPGRGKKRYKNLQTPIPWLATINTFNGQAIATVVTALQAEGVIGEQDISISQTPDGRIMGELAIKQMLRHNEIAQHKNSLRLHRCHEYSKRLSNLAQVKDNYLSSVCQELRAPLTHMKTALSLLNSPTLKPLQRQRYLQMLSTQCDRQNSLINGVVELLEIEKSFKSPHFEAVNLSEVVPGVVSTYQPLAHEKGIMLAYTVPSDLPEVWFISGGLKQIIINLLANSIKFTPKGGQVWVKVREQGEAIHIEVRDTGIGIPEGELSKIFDRFYRIRTTSLDENTGAGLGLSVVQELLQRCGGSISVKSKPGEGSIFTVHLPIRSLMN
>NZ_AP018254.1|WP_096621278.1|2051770_2052301_-|P-loop-NTPase-family-protein
MVAQLKTERINSSLRLPYTLEGQIHVFTTSHRSFFTNVMAEALRIAGQGTPVLVVQFLKGGINQGPENPVRLGQKMDWIRCDLPRCIDTPHLDDIENQSLQSLWLHTQEVVNTGKYSLVVLDELSVAIHLGLIPETEVLQFLSKRPSNIDIIMTGSDMPKSILDLADQVTNVRRSQ
>NZ_AP018254.1|WP_096621279.1|2052790_2053372_+|nucleoside-monophosphate-kinase
MRVVILGGSGSGKSTQAERICRYFQIQRVSTGEVLREAITQSAVLDDPQLQELGLHAQPYIEQGELVPDDLMIEFIRSRLKKPDVSKGWVLEGYPRTAFQAEELDFLLDELGQKLDWCVYLQVPEAVMVNRSVERSLPDDQPEIIHRRVELFYDCTVPILEYYDRRRRLLTINGDQSPDAVEDEIIRLLSEVV
>NZ_AP018254.1|WP_096621280.1|2054296_2055106_-|phosphate-ABC-transporter-ATP-binding-protein
MTHVSHTSVATAPVLQAENLSVFYGSFKAVRDVYLDIARNQVTAFIGPSGCGKSTVLRCFNRLNDLIPGCHIQGRILFDNQNIHDKRIDPVELRRRIGMVFQRPNPFPKTIYENIAFGARINGYQGNMDELVEQSLRQAALWDEVKDKYKRESGLALSGGQQQRLCIARAIAIQPEVLLMDEPCSALDPISTRRVEELIQELKQRYTIIIVTHNMQQATRVADMTAFFNAEATEKGNKMGYLVEYAPTEQIFNNPQQEFTRQYVTGQFG

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Crispr_ID: NZ_AP018254_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_23

2129115-2129227

Orphan

Consensus_repeat	Method
TCGGAGAACGGAAAGCCTCTGCACGTCTAGGGATTTTGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_23

>merge|NZ_AP018254|23|2129115-2129227|CRISPRCasFinder
TCGGAGAACGGAAAGCCTCTGCACGTCTAGGGATTTTGGATTACCCTAGCTTGCTGTGTGTCCCATAGACAAATCGGAGAACGGAAAGCCTCTGCACGTCTAGGGATTTTGGA

>NZ_AP018254|23|23|2129115-2129227|CRISPRCasFinder
TCGGAGAACGGAAAGCCTCTGCACGTCTAGGGATTTTGGA	TTACCCTAGCTTGCTGTGTGTCCCATAGACAAA
TCGGAGAACGGAAAGCCTCTGCACGTCTAGGGATTTTGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621327.1\|2130260_2130986_+\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|273494
NZ_AP018254.1\|WP_096621330.1\|2134264_2136859_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_AP018254.1\|WP_096621329.1\|2133414_2134155_+\|M50-family-metallopeptidase	unknown	unknown	gnl\|CDD\|315961
NZ_AP018254.1\|WP_096621324.1\|2124910_2126341_-\|protein-translocase-subunit-SecD	unknown	unknown	gnl\|CDD\|235615
NZ_AP018254.1\|WP_157780682.1\|2131624_2131807_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621331.1\|2137388_2137661_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621319.1\|2119734_2120895_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340928
NZ_AP018254.1\|WP_096621323.1\|2123960_2124914_-\|protein-translocase-subunit-SecF	unknown	unknown	gnl\|CDD\|237275
NZ_AP018254.1\|WP_096621325.1\|2128430_2129039_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621322.1\|2123283_2123664_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892769.1\|2132919_2133273_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_AP018254.1\|WP_096621320.1\|2121752_2122664_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096626028.1\|2126547_2127681_-\|CapA-family-protein	unknown	unknown	gnl\|CDD\|214858
NZ_AP018254.1\|WP_157780681.1\|2119419_2119572_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621321.1\|2122759_2123245_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_AP018254.1\|WP_096621318.1\|2118227_2119295_+\|sulfate/molybdate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224043
NZ_AP018254.1\|WP_096621326.1\|2129288_2129933_+\|DUF2301-domain-containing-membrane-protein	unknown	unknown	gnl\|CDD\|370802
NZ_AP018254.1\|WP_096621333.1\|2139526_2142061_+\|BamA/TamA-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|130065
NZ_AP018254.1\|WP_096621332.1\|2138242_2138983_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|181800
NZ_AP018254.1\|WP_096621328.1\|2131998_2132889_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621327.1\|2130260_2130986_+\|6-phosphogluconolactonase	gnl\|CDD\|273494	TIGR01198, 6-phosphogluconolactonase_6PGL., 6-phosphogluconolactonase. This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with [Energy metabolism, Pentose phosphate pathway].	6.81078e-102
NZ_AP018254.1\|WP_096621330.1\|2134264_2136859_+\|GAF-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.08184e-67
NZ_AP018254.1\|WP_096621329.1\|2133414_2134155_+\|M50-family-metallopeptidase	gnl\|CDD\|315961	pfam13398, Peptidase_M50B, Peptidase M50B-like. This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.	5.3353e-40
NZ_AP018254.1\|WP_096621324.1\|2124910_2126341_-\|protein-translocase-subunit-SecD	gnl\|CDD\|235615	PRK05812, secD, preprotein translocase subunit SecD; Reviewed.	6.80045e-159
NZ_AP018254.1\|WP_172892769.1\|2132919_2133273_+\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	7.15614e-14
NZ_AP018254.1\|WP_096621319.1\|2119734_2120895_+\|MFS-transporter	gnl\|CDD\|340928	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily. This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.18058e-121
NZ_AP018254.1\|WP_096621323.1\|2123960_2124914_-\|protein-translocase-subunit-SecF	gnl\|CDD\|237275	PRK13022, secF, protein translocase subunit SecF.	8.44133e-115
NZ_AP018254.1\|WP_096621320.1\|2121752_2122664_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.61965e-15
NZ_AP018254.1\|WP_096626028.1\|2126547_2127681_-\|CapA-family-protein	gnl\|CDD\|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	5.73104e-67
NZ_AP018254.1\|WP_096621321.1\|2122759_2123245_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.10665e-16
NZ_AP018254.1\|WP_096621318.1\|2118227_2119295_+\|sulfate/molybdate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224043	COG1118, CysA, ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism].	6.04677e-128
NZ_AP018254.1\|WP_096621326.1\|2129288_2129933_+\|DUF2301-domain-containing-membrane-protein	gnl\|CDD\|370802	pfam10063, DUF2301, Uncharacterized integral membrane protein (DUF2301). This domain, found in various hypothetical bacterial proteins, has no known function.	8.98183e-74
NZ_AP018254.1\|WP_096621333.1\|2139526_2142061_+\|BamA/TamA-family-outer-membrane-protein	gnl\|CDD\|130065	TIGR00992, chloroplast_import-associated_channel_homolog, chloroplast envelope protein translocase, IAP75 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the TOC IAP75 protein. [Transport and binding proteins, Amino acids, peptides and amines].	3.87112e-166
NZ_AP018254.1\|WP_096621332.1\|2138242_2138983_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	1.17871e-140
NZ_AP018254.1\|WP_096621328.1\|2131998_2132889_+\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	1.27568e-21

>NZ_AP018254.1|WP_096621325.1|2128430_2129039_+|hypothetical-protein
MLGFPGCIVGSQKLEKNQQLDLFSPTLVSSSVVQQEPVLLMDEKTLKKWKSKIAIYQQRVRTKEPVKQNTLFSVTQSHVDPDVIDPFTLPVSPLSFYRLPTETAGQSCLYFIVDHQNDLLLYVGETCKSNQRWRGVHDCKRYIEKYLDLHYRYQLKTAVNISFWWDAPTKTRSRQQLELALIQKWKSPFNKENWRQWGQPFG
>NZ_AP018254.1|WP_096626028.1|2126547_2127681_-|CapA-family-protein
MVGISIVILPIVGLVFALNQGLFANIPNQSPSNQDSIETQPEPDLPKPEKIKTTISIKAVGDIVAGTNFPDYRLPKNPDILFPQAVRQKLQGADVLFGNYESTLTNHPHSSKNVGRGMVFAFRSPPSYSKLFAQVGFHVMSVANNHSFDFGLKGFQDTVASLKSVGIAPVGEKNQITYTQVKGVPVAWIGFCFYEYCNTVQNISAGQKLVQTAKQNADIVIVSMHVGAEGNNALRVKNQTEMFYGENRGNSRQFARAMVDAGADLVLGHGPHVPRAMEVYKNKLIAYSLGNFLGYRTFSTTGAKGKSLILEAKINQDGDFVEGRIIPIQLNRQGIPLVDNSGQTISLVRNLTKTDFPQTPIVIQQKGEIRLTRGSGR
>NZ_AP018254.1|WP_096621324.1|2124910_2126341_-|protein-translocase-subunit-SecD
MQRQRSLLGLILVVVIAAIAVIATIPVPLGLDLRGGSQLTIQVKPSPETGIKTITERELEAVKRVVEGRVNGLGVSEPVIQTVGTDKILVQLPGVNDPEQAERVLGGTAQLEFRQQNPGTEGEFIALNQLRLQLNAQRALLLSAENGKQDAEAIAKNKAEIEKNNQAIAKLFSSTNPPLTGKFLVDAYGEPTAGTAWNVAIRFNQEGGDLFAKITKELAGTNRSIGIFLDNELISSPVVGVEHAATGITGGSAVITGNFDAQSAQDLGVQLRGGSLPVPVEIAERRTVGATLGKDSIQSSLYAGIGGLILVLVFMVVYYRLPGLIADISLIIYALLSWASFALLGVTITLPGIAGFILSIGMAVDANVLIFERTREELRAGKTLYRSVESGFYRAFSSILDGNVTTWIACAALFWLGSGLVKGFALTLAVGIGVSMFTAITCSRTLMFVAASIPSLRKIEFYTPQQQIIDRTEAQS
>NZ_AP018254.1|WP_096621323.1|2123960_2124914_-|protein-translocase-subunit-SecF
MKISVNKSRGLWWSISLGVILIGIVAMFISWQNPTIRAPLRPSLDFVGGTRLQFERDCSQPVNCDQPIDINVVREVAKSQGLEGSSIQIVGENGISIRTRDLSTDARTQLQTALSAKVGAFDPQKNQIDSVGPTLGRELFNSGMIALTVSFLGIIGYLAFRFQLDYAIFAVLATFHDVLVTVGIFAILGLSPLATEVDSLFVVALLTITGFSVNDTVVIYDRIRETLKQEPNRAITDIVDDAVNQTLGRSINTTLTTILSLVAIFLFGGETLKYFALALIIGFVVGAYSSIFIASTLLAWWRERHSSVKMEGVGSSE
>NZ_AP018254.1|WP_096621322.1|2123283_2123664_-|hypothetical-protein
MEKPGDNSTFANQVQRLHRLTVYFRWLFVLVLWLVVAPLAIWDLRTDIQLWREHFTWTAVRYALYFRPLATLGLSLCIGMTMAVLIWQSRNIIWGLPEQEQKRLEQQVMRIRNQGSSHPLWKWICG
>NZ_AP018254.1|WP_096621321.1|2122759_2123245_-|GNAT-family-N-acetyltransferase
MKETYIQFSDRKSDIDLVQLQQLFDLAAFWAKDRTVEDLRTAIQHSEPVITVWHDSRLIGFARATSDGIYRATIWDVVVHPEYRRIGLGSKLVETVISHPHMCRVERVYLMTTHHAQFYEKIGFQSNSTTTMVLYNRENLSSLSNPEIMELEEIASSKSQR
>NZ_AP018254.1|WP_096621320.1|2121752_2122664_+|HAMP-domain-containing-histidine-kinase
MFDTSNWIYLAASFGLGFGIRGLIHRVAKVNREKSPVTSVGESQEQEKQDLEKQLLQTHLAYQMVQEMGAFKAGFLARTTHALRSPLNGLIGLHQLILSDLCENPEEEREFIQQALERALKLLKLIDEILNVARLQAGTNRLNIQPFSVIDVLKETHNLTAILAENRSYKYDITFPQEDVHALVDPYWLRYTLVSLVETAIAGMEEGGISLHTQVCHRQKSYILQICLDVPSHALPPQESIDLATAETLTTIDTNSNQPNMSPGMKIVLTQNILEVMGGKLDIYAHPEQPDITRVLISVPASQ
>NZ_AP018254.1|WP_096621319.1|2119734_2120895_+|MFS-transporter
MAQGKSKSALKFVVILGIVSLCADATYEGARSITGAYLGVLGASGFVVGLVAGLGELIGYCFRLFIGYLSDKTRKYWRITTIGYALNTTVVPMLALAGTWQIAALLMLGERTGKAIRTPPRDVLLSHAALRLGGGFGFGLHETLDQIGAVAGPLAVATMVSFTGGYQSGFAILLIPAVVGMVVLLFGQRIYPNPRDFEHHTAPLDSQGLPRKFWIYLGAVAFMAAGFADFPLIAYYFQTQAIATGNTIPLLYALAMGVDGIAALIFGRLFDRFGISILIVAVVLSSLFAPLVFFGTLNLAVLGIVLWGIGMGAQESILKAAVAAMIPPEKRGSAFGIFNTGYGLSWFLGSALMGVFYDSSMNILIIFSILVQLAAVPILLFVTRDR
>NZ_AP018254.1|WP_157780681.1|2119419_2119572_-|hypothetical-protein
MSSRGSERAIADEIVRDTCCCARVGDILMAVSMVITQVTANKVIPVNKCL
>NZ_AP018254.1|WP_096621318.1|2118227_2119295_+|sulfate/molybdate-ABC-transporter-ATP-binding-protein
MQLFVDIHKPLTSYPLDVQFNLEGKVLGILGGSGSGKSMTLRCIAGLETPKRGSIILNGRILFDSKKRINLPIRSRRVGIVFQNYALFPHLTVAKNITYGLRHLSPTERQQRLTEQIRKLQLSGLENRYPNQLSGGQQQRVALARALAVEPEVLLLDEPFSALDTHLRHQLQEQLIETLSSYQGVTLFVTHNLEEAYAVCEQLLIISQGQVIAYDDKQSIFQRPATYTVAQLTGCKNFSPAKAISSNQIEAINWGCRLEVIPPIPPSFTYAGIRAHHINITTDPNQENTFPCWLAHTRETPHRMTLYLKLHHPPTHSNDYQIQAELFKEKWITIKDRPFPWYVKFNPQSLFLMQP
>NZ_AP018254.1|WP_096621326.1|2129288_2129933_+|DUF2301-domain-containing-membrane-protein
MNCSMSEIYQGQFGEFTITQSDRNGVIVYRAALLVAAICFAVGSGLVLIWPHPIVYKSLTWLFFGFSAALGVSLLTIHIYMVQLHRVLQLFWLIGVVAGLALNISQPTPLAVTVYNQPQTIFGVGFIFAALTGIYFKEAFCFHRLETKVLTITTPLLLLGHLLGILPLSWERGLLATWAVLFLVFALRKAFQAIPPDIGDKSVFAYLRGVGSRE
>NZ_AP018254.1|WP_096621327.1|2130260_2130986_+|6-phosphogluconolactonase
MNKHIEVLTDTDSLIARAQELILKKLEAAIQMRGRFTMALAGGSTPKPLYESLAAGNLPWDKIHVFWGDERYVPPDHPDSNERMARLAWLDRVDIPATNIHPIPTGEGNPAVSALKYEQHLQQFFQAAPGVFPALDVILLGMGDDGHTASLFPHTDALKVRDRLITVGNKDGQPRITFTYPFINAARCVMFLVAGANKRMALGQVFAESSDSEQYPSRLIQPHGELWWLLDAAAGSELEQK
>NZ_AP018254.1|WP_157780682.1|2131624_2131807_+|hypothetical-protein
MKYLLYQRFRIPEVATTVQIGRSSFSFLLSAPIARNHRQTKGLILIKLLSMPRVVAKIGS
>NZ_AP018254.1|WP_096621328.1|2131998_2132889_+|FHA-domain-containing-protein
MIVCPNCNHPNPDGAVQCEACYTPLPATVTCPSCGATVQADASFCGQCGYNLRSAAAAPPTIAPDIPVPPTVAPDPLPPAQPVVVTAPISPPEPLPATVVSAPAPVSMPAPEVPPAPVVEAPAPAPVAEAPVPAPVVEAPAPAPVPTPIPVEMEAPAPEPIPVEMEAPAPEPVATVPAPPPSMTQLQQVTAGLIHVQSDQQIELPQNLSVIHIGKPNDRIPPDIDVSGFANSEIVSRIHADIRAEGDAYYIEDVGSSNGTYINNLPLLPGNRHRLRAGDRISLGKGDLVTFIFQMS
>NZ_AP018254.1|WP_172892769.1|2132919_2133273_+|FHA-domain-containing-protein
MRAITLILLHPQQINPAQSWSFENEPIIRIGRATDNHVILYSAVVSRHHVEIRQAGDSWEIISLGANGTYVDGERISQVPVTDGAIFRLARSGPQLQVRLGNSNLNAIARSTSASAQ
>NZ_AP018254.1|WP_096621329.1|2133414_2134155_+|M50-family-metallopeptidase
MGDRWKQLEDIFKTDAPAEMNRMGLSWLIMAGILTAVLWQIPGGDYILYPFTILATWFHEMGHGLMALILGGNFVKLEIFSSGSGVATYAAPFSWSPIHRALVAAAGPMGPPIAGATLILVSRNRLATNWCLKLLGVFLIISTIIWVRSPFGFVFIPLLGAVIFGLGLIPSPSIKGFMIQFLGVQACVSTYHQLNYLYSYRAGPFGLSDTAQIQQELFLPYWFWATLMAVASAAILFQSLRIAYRS
>NZ_AP018254.1|WP_096621330.1|2134264_2136859_+|GAF-domain-containing-protein
MTLPSPGSVLATLTELTQVNRTHVLLRRVKDLSVNEFFCLLEFITAEFQQFLRAIELINHEALETVLERVLEAITLKIGQILQAEHTTIFLVDRDKGQLWSKVSQDNILKPVEMRMPINIGIPGHVATTGNCLNIPDAAAHPLFSPELEKQMGYKMRNILCMPVMSSKNQTVAVVQLANKTGEAVFDAEDEKRFRDFAASIGIILESCQSFYVAARNQRGATALLRATQTLGQSLDLEITLQIVMEQARILMQADRSTLFLYRKEMNELWTKVAAADGERMIEIRIPANRGIVGYVASTGQALNITDAYQDPRFDPTTDRKTGYHTRNILCLPVFNSANELIGVTQLINKQQGSFTASDEEFMRAFNIQAGIALENARLFESVLLEKQHQKDILQSLSDAVISTDMDGRIVTINDAALELLGCPISDAQERGDKLIWESHLIGRLVWEVVPIENLQMRLEDSLKSGARHFVPEQILTVGVYQEQILNTDGAVDGENVETIPGKSMLVVSDRNCPQQYIPWNQVLTPPGEFIPASQVKLLERSINLTVNPLTNPEGGVRGGLVVLEDISREKRMKTTMYRYLTPRVAEQVMELGEDALMVGERKEVTILFSDIRGYTTLTENLGAAEVVSLLNQYFETMVEAVFNHEGTLDKFIGDALMAVFGAPLPLTENHAWKAVKAALEMRERLAAFNQRRVVAAQPMINIGIGISSGEVVSGNIGSHKRMDYTVIGDGVNLSSRIESVTKEYGCDIILSEFTYQMCCDRIWVRQLDKIRVKGKHQAVNIYELIGDRTTELDANTQEFLSHYHTGRAAYLSRNFEGAIKSFQRAKTIRPTDTTVSIYLRRCQDYLFQPPPASWDGTWTMESK
>NZ_AP018254.1|WP_096621331.1|2137388_2137661_-|hypothetical-protein
MDKDDFLYPRSRYYGQVKPENLVFNANLQEFAQKISYICNLETAGKIPPEQAYEQIKALWKELKQAKKLLRIGENPFQDGNGSGDNGDKP
>NZ_AP018254.1|WP_096621332.1|2138242_2138983_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MSVSTNPTKLYEGKAKVIYTTSEPEILLATYKDDATAFNAQKRGSIAGKGNINCTISSHLFRYLEAHGIKTHFIDTPTDNQMRVRAVKIIPIEVVVRNIAAGSLCQQTGLPLGTELKSPLVDFYYKSDELGDPLLTRDRILLMEIATPGQIETITNLALQVNRLLQEFFRRCDIILVDFKLEFGLDAQQQILLADEISPDTCRLWDSSQTDANLRVLDKDRFRRDLGNVEGAYQEVLQRVLKAVSS
>NZ_AP018254.1|WP_096621333.1|2139526_2142061_+|BamA/TamA-family-outer-membrane-protein
MRFYPVLATVVAITTPLSSSMAAQAQTPSAVTEKSENITVETTSSPPGELESEVRDNAQNQRENQPQTSLPIETQDTTVAVRPESIGQENQQPAVNSTVDTIPTDGAVNSNKLARLKAVLSQSKAKQGANSPQAAANYPITTQVPNRTTKTAAQLIPANNGKSIAQTFPPETPTAPAPLPDLPTPPNQQPGIETPRQIPNNTPVPQQQPQFPNTPTNNQPGTTNSESEPQVLVAEVLVRPETGQLTTELENEVYRVIRTQPGRTTTRSQLQQDINAIFATGFFANVQAVPEDTPVGVRVSFVVQPNPILTKVEIQANPGTNVPSVLPPGTVDQIFKPQYGRILNLRDLQEGIKQLNKRYQDQGYVLANVIGSPQVTENGVVTLQVAEGVVENVRVRFRNKEGQDTDDQGRPIRGRTKEYIITREVELKPGQVFNRNKVQRDLQRVFNLGLFEDLNISLDPGQDPSKVNVVVNVVERNSGSIAAGAGISSASGLFGTVSYQEQNFGGRNQKLGAEIQVGQRELLFDLRFTDPWIAGDPYRTSYTGNIFRRRSISLIFDGKDQDIRTFDIGNPNNEGDRPRVLRLGGGINFTRPLSRNPFERSEWVASAGLQYQRVSIRDADGDIRPIGRVRNDSSNSTTSTSTKNIPLSFSDGGEDDLLFLQLGASRDRRNSALQPTQGSFLRFGVDQSVPVGLGNIFLTRLRGSYSHYFPVQFIKTKGPQTLAFNVQGGTILGDLPPYEAFTLGGSNSVRGYEEGGLGSGRSFLQATAEYRFPLFSVISGAVFFDVGSDLGTTTEAARVLNKDGFGYGYGLGVRIQSPLGPIRIDYGINDDGDNRINFGIGERF

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Crispr_ID: NZ_AP018254_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_24

2223942-2224036

Orphan

Consensus_repeat	Method
GTACAGACGACCCGTCGGGTCGTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_24

>merge|NZ_AP018254|24|2223942-2224036|CRISPRCasFinder
GTACAGACGACCCGTCGGGTCGTCTGTACAGGGAGTAGGGAGAGACGCGATATATCGCGTCTGTACGGGGGTAGAGACGACCCGTCGGGTCGTCT

>NZ_AP018254|24|24|2223942-2224036|CRISPRCasFinder
GTACAGACGACCCGTCGGGTCGTCT	GTACAGGGAGTAGGGAGAGACGCGATATATCGCGTCTGTACGGGG
GTAGAGACGACCCGTCGGGTCGTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621412.1\|2228613_2229885_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_AP018254.1\|WP_096621406.1\|2223185_2223572_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350220
NZ_AP018254.1\|WP_096621409.1\|2226505_2227375_-\|flagellar-assembly-protein-H	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621410.1\|2227454_2227655_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621398.1\|2214471_2215497_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NZ_AP018254.1\|WP_096621404.1\|2219965_2221450_-\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_AP018254.1\|WP_172892770.1\|2217198_2218545_-\|oligosaccharide-repeat-unit-polymerase	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621415.1\|2235454_2236027_-\|K(+)-transporting-ATPase-subunit-C	unknown	unknown	gnl\|CDD\|184447
NZ_AP018254.1\|WP_096621405.1\|2221902_2222829_-\|flagellar-assembly-protein-H	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621407.1\|2223568_2223811_-\|DUF2281-domain-containing-protein	unknown	unknown	gnl\|CDD\|378366
NZ_AP018254.1\|WP_096621411.1\|2227907_2228105_-\|DUF2811-domain-containing-protein	unknown	unknown	gnl\|CDD\|371302
NZ_AP018254.1\|WP_096621399.1\|2215528_2216254_-\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
NZ_AP018254.1\|WP_096626042.1\|2233774_2234110_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|184253
NZ_AP018254.1\|WP_096621400.1\|2216315_2217170_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_AP018254.1\|WP_096626040.1\|2232850_2233663_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143596
NZ_AP018254.1\|WP_096621402.1\|2218583_2218769_-\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|377448
NZ_AP018254.1\|WP_096621408.1\|2225449_2226343_-\|flagellar-assembly-protein-H	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621403.1\|2219087_2219972_-\|FkbM-family-methyltransferase	unknown	unknown	gnl\|CDD\|273628
NZ_AP018254.1\|WP_096621414.1\|2234340_2235450_-\|sensor-histidine-kinase-KdpD	unknown	unknown	gnl\|CDD\|225115
NZ_AP018254.1\|WP_096621413.1\|2230041_2230470_-\|DUF488-domain-containing-protein	unknown	unknown	gnl\|CDD\|377317

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621412.1\|2228613_2229885_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.06555e-62
NZ_AP018254.1\|WP_096621406.1\|2223185_2223572_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	4.44872e-52
NZ_AP018254.1\|WP_096626040.1\|2232850_2233663_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143596	cd07572, nit, Nit1, Nit 2, and related proteins, and the Nit1-like domain of NitFhit (class 10 nitrilases). This subgroup includes mammalian Nit1 and Nit2, the Nit1-like domain of the invertebrate NitFhit, and various uncharacterized bacterial and archaeal Nit-like proteins. Nit1 and Nit2 are candidate tumor suppressor proteins. In NitFhit, the Nit1-like domain is encoded as a fusion protein with the non-homologous tumor suppressor, fragile histidine triad (Fhit). Mammalian Nit1 and Fhit may affect distinct signal pathways, and both may participate in DNA damage-induced apoptosis. Nit1 is a negative regulator in T cells. Overexpression of Nit2 in HeLa cells leads to a suppression of cell growth through cell cycle arrest in G2. These Nit proteins and the Nit1-like domain of NitFhit belong to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 10.	2.88589e-138
NZ_AP018254.1\|WP_096621398.1\|2214471_2215497_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	7.58134e-76
NZ_AP018254.1\|WP_096621404.1\|2219965_2221450_-\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.91697e-29
NZ_AP018254.1\|WP_096621415.1\|2235454_2236027_-\|K(+)-transporting-ATPase-subunit-C	gnl\|CDD\|184447	PRK14003, PRK14003, K(+)-transporting ATPase subunit C.	7.9728e-103
NZ_AP018254.1\|WP_096621407.1\|2223568_2223811_-\|DUF2281-domain-containing-protein	gnl\|CDD\|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	2.66888e-11
NZ_AP018254.1\|WP_096621413.1\|2230041_2230470_-\|DUF488-domain-containing-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	9.28986e-32
NZ_AP018254.1\|WP_096621399.1\|2215528_2216254_-\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	4.43167e-26
NZ_AP018254.1\|WP_096626042.1\|2233774_2234110_-\|c-type-cytochrome	gnl\|CDD\|184253	PRK13697, PRK13697, cytochrome c6; Provisional.	3.07599e-58
NZ_AP018254.1\|WP_096621411.1\|2227907_2228105_-\|DUF2811-domain-containing-protein	gnl\|CDD\|371302	pfam10929, DUF2811, Protein of unknown function (DUF2811). This is a bacterial family of uncharacterized proteins.	1.44134e-32
NZ_AP018254.1\|WP_096621400.1\|2216315_2217170_-\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.19974e-72
NZ_AP018254.1\|WP_096621402.1\|2218583_2218769_-\|FkbM-family-methyltransferase	gnl\|CDD\|377448	pfam05050, Methyltransf_21, Methyltransferase FkbM domain. This family has members from bacteria to human, and appears to be a methyltransferase.	1.64883e-05
NZ_AP018254.1\|WP_096621403.1\|2219087_2219972_-\|FkbM-family-methyltransferase	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	2.16536e-38
NZ_AP018254.1\|WP_096621414.1\|2234340_2235450_-\|sensor-histidine-kinase-KdpD	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	0

>NZ_AP018254.1|WP_096621407.1|2223568_2223811_-|DUF2281-domain-containing-protein
MTSQTVNITELLIGKLQSLSPEQQQTLLDFVEFLEHKNAQSQPIPTQPGQKRVLGLNRGEIWMSDDFNEPLPDEFWLGEE
>NZ_AP018254.1|WP_096621406.1|2223185_2223572_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MNILLDTHTFIWSTANPEKLPQTVTNLLTDINNIWILSIASVWEIQIKLQLGKLNLNSSLPKLIDNQQRVNNLQILPIDLTHIYALNNLPSHHKDPFDRILIAQGMVEKMPIVSIDEVFDNYLIKRLW
>NZ_AP018254.1|WP_096621405.1|2221902_2222829_-|flagellar-assembly-protein-H
MSKNLFDQFAKQLFETFLSPLGEVRTNLEVPGEPKFIDIWFTPRNQPSINTESLGILAEIATLPCLLEPFRNQPNPFEVRSCLSKLFHVQADLQRQLKRQQQTLSESELPQLWIITPSASEDLLSMFGATLSEDWLEGVYFLPKALKTAFIAINKLPRTPETLWLRILGKGVIQQQAVEEVIGFNPNDPRRSRILKLLATWKISMEASAIIEEEERELIMTLSQAYLEWEQETQRRGIEQGIQQGIQQGMQQGQRQVVENLLKVRFGELDEELAAIIEPMLQLPPNEYAALLLQLSSLKREELLGRFS
>NZ_AP018254.1|WP_096621404.1|2219965_2221450_-|oligosaccharide-flippase-family-protein
MKNSLLRNGFYNTLAGVIRIGLGVLTIPLLIRIIGIEEYGLWTLAYTVIGIVTLAEAGLSVATTVFVSQDLGKDDFEGLSQTLTVTFGGMFILSSIAFLTLFFAAQPIVNFFPQLEPQQQLIIRQAVQIGSIVVWSRLLQQVLVGVEQAYQRYDVMNVLNTIQSILLSLGMLVVVWLGGRTVDLMQWQAFVSILLLFSHVLVVRSLLRKVNLNIKWDKKKIIDIGSYSLISWLTSLGGMIFSRGDRLVIGSILGVNALGAYSAITDITILINQISALPAQPLLPIISNFKAQKDIDLSILHKQVKTAFQLNIFIALLIGGSLLTLRDTVLNIIFSNSYFQEYTISFFIITIIYSMYSINGVGYYVLLASKAANLCMFIQLISGISSIILIIWGASKFGLIGASFGNSGYLIVWLLTSSGMRQLSISFGTWLRWLKLPFLWFLGVILTSANFTISGSLYLRTIVLFIQSIALVGWLIIEQNIDIKSILRRILIKC
>NZ_AP018254.1|WP_096621403.1|2219087_2219972_-|FkbM-family-methyltransferase
MLRLGKLYGKIKTKLKYHFLWKIQCLFARNTLFSFLLPDGSRFDYPINTAVGRLLFSGIFETREIEFMRQTLKQNDIFFDIGANGGIYTVIAAKQVGKNGHVYAFEPGERELKLLRHNIAINNLTNVTVIERGVSNEKGTAKFGISRDGAMNSLLKTNHPGQEIEEWQTIETTTLDDIIQEFNIKKVDFIKIDVEGAEKKVFEGSRNLLESQDNVVILFEASDLTAVRFGYTVNDFLKELISVNLIVYYFDKDGNILKLSQDKLRSKITGYNFIASKISFEDMLVDKTAVNEKS
>NZ_AP018254.1|WP_096621402.1|2218583_2218769_-|FkbM-family-methyltransferase
MGIKFTQPDLSNILLEDNASNLEIDESFFIKIDVQGYEENVLIGGKDTLKKAKILLIENSF
>NZ_AP018254.1|WP_172892770.1|2217198_2218545_-|oligosaccharide-repeat-unit-polymerase
MYSLIAISSIFLSCLITRTCKKEPVIFNSIFIIYLVWHLPLVLSIILPFSFPLREEENNFPYILFFLVMIHIIIFGGVYAWIKWYKSNRILFSTSQNTKREERLSPIYLIGAFSAPIILAIDNFLIKGVSISLDLSQNRDLATSTATLLSLIGVFLAGLCLYLLNWTLKKQSDKVQFNIFYLLPFIMTSIVITLTGNRQFLFLGVNFILFKSISIYRPKISHVIKWLLYIIAFSVPFGIGFQFLRQSALEGQQDIFIISIMKLTILNDHLLVNFLYSNKILLLPALYIYVYFGTQYDTLSATIRIIDENMPFTSLTLPVLYRRWNAFFNLPDQDAIVDMIYNQIESEYGIFPAIWNTMFAGIYLEGGILYIVIFSLLLCYIHFNLTNNYLNNKKNGTFNLIIFYMFMSFGIITIGTYEVPFFFLILQALISSMLINKNRRIERSLIDI
>NZ_AP018254.1|WP_096621400.1|2216315_2217170_-|glycosyltransferase
MSISQKRPTFSVIIAVYNNVQNLQRCIDSFSSQSYDSKELIVIDGKSTDGTVDIIVNNKEKIAYWESERDRGIYHAFNKGVSHAKGEWIIFLGSDDYFYNSDVLKNVVEQLALAQHCDAGIVYGKVAIISKEYEILQIVNQTWDKSKCNFLQFNNIYHQGVFQHRSIFHSKGFFDETFKIAGDYEFLLRELKDNTPYFLDDIIISCMKIGGVSSSPENYIEVYKEFYKARIKNKVKGFPLALLWLFLTAHVRLIVRKILGNSVSNQITDFYRKLTARALLWTRL
>NZ_AP018254.1|WP_096621399.1|2215528_2216254_-|FkbM-family-methyltransferase
MIKQIGRFFVRFIPSGLLIPIFRGPLAGRKWIVGSAAGEGKGLSIIFNLSEPRQLEMTLKVAKPDFICFDIGANVGFYTLIFSQISKHVYAFEPLPRNLSYLYRTLAINHVDNATIVPFAVSDSISLSSFMEGENCAIGMLDHKGKIPTVTVSLDDFISTYKVVPQILKIDVEGAEMSVLMGAKNLLMTSSPIIFLSTHGEINRNKCLEFLLDVGYKHIIPLNNELMDNASEYLVMNREIE
>NZ_AP018254.1|WP_096621398.1|2214471_2215497_-|glycosyltransferase-family-4-protein
MKPIKLCLDNIIYQLQRAGGISVYWQEISSRILESQLFQILNVNGHSLTRYLPLYTNADIFHSSYYRVDLNFKVRNVVTVHDFIYELGYLNTRKSRLHLFQKKIALQKADAIICVSENTKKDMLSLHPELADHPHIYVIYHGTKLKLSQENGYNPLHKFIQFSKEEKNKYILFVGKRVAYKNFQNALTGFYESSLPGLGFSMICIGSKFSESENSMIKSLGMENQVRAFDRVNQAELSYLYQNAFALVYPSLYEGFGLPPLEAMSCGCPVIASNTSSIPEVVGDAGILINPYETKEIALSLEILLSNEVRDTYINQGFRRAKFFSWEVAAQKHIEIYQSLS
>NZ_AP018254.1|WP_096621408.1|2225449_2226343_-|flagellar-assembly-protein-H
MSKNLFDQFAKQFFETFLSPLGEVRTNFEVPGEPKFIDIWFTPRNQPSINTESLGILAEIATLPCLLEPFRNQPNPFEVRSCLSKLFHVQADLQRQLKRQQQTLSESELPQLWIITPSASEDLLSMFGATLSEDWLEGVYFLPKALKTAFIAINKLPRTPETLWLRILGKGVIQQQAVEEVIGFNPNDPRRSRILKLLATWKISMEASAIIEEEERELIMTLSQAYLEWEQETQRRGIEQGMQLGQRQVVENLLKARFGELDEELASIIEPMLELPPDEYAALLLQLSREELLRRFS
>NZ_AP018254.1|WP_096621409.1|2226505_2227375_-|flagellar-assembly-protein-H
MSKNLFDQFAKQFFETFLSPLGEVRTNFEVPGEPKFIDIWFTPRNQPSINTESLGILAEIATLPCLLEPFRNQPNPFEVRSCLSKLFHVQADLQRQLKRQQQTLSESELPQLWIITPSASEDLLSKFTANLRPDWLEGIYFFGEGFKTAIIAINKLPRTPETLWLRILGKGVIQQQAVEEVIGFNPNDPRRSRILKLLATWKISMEASAIIEEEERELIMTLSQAYLEWEQETQRRGQRQVVENLLKARFGELDEELASIIEPMLELPPDEYAALLLQLSREELLRRFS
>NZ_AP018254.1|WP_096621410.1|2227454_2227655_+|hypothetical-protein
MVAFWMKNPISILAVEVWRATLSRDRSNLPSSKSGRSKFISKSRINIINWKLTDGGIKAIAQQYNT
>NZ_AP018254.1|WP_096621411.1|2227907_2228105_-|DUF2811-domain-containing-protein
MNTTVSIFTEIPETLHESLKNYLNEHPDWDQNRVLTAALSLFLLQHGESDRSAARVYLETLFHHC
>NZ_AP018254.1|WP_096621412.1|2228613_2229885_+|MFS-transporter
MYQQPKSRGGLSIPQFDSQIWILAGGRLLSELGTGFTLFYAPIFFVTKVGLSATSVGIALGTASISGIAGRVCGGLWTDSPIWGRRKTLLLSAVFSAIGSTVLTATFDFVTLVIGNIIGGFGAGLYWPATEAVVADLTTPQNRREAYAITRLADNLGLGMGIILAGWLVSAGGNFRWLFAIDATSFVIFFAVIWNAIRETSQLSLGEKKHHLGWSGWRILLQDHILWVYVLVNIMFTTYISQLHSTLPIYLQRVVVSDGGRLNEGIIAGLFAVHLLMAIVVQLPVAKMLRNLSHPQTLSVSAIIWSGGFAAVWWSGWAKSGIWISGIALAIFAIALVSYTPSAAAFVSEIAPVERRGIYLSVNSLCWAVGYFIGPSLGGWAMDQTSNVISIYWLGLAATTPIAIAILTYLQRIRNMPIQKPHI
>NZ_AP018254.1|WP_096621413.1|2230041_2230470_-|DUF488-domain-containing-protein
MNQQINLYTIGFTQKTAKKFFETLVNAGVTRVIDTRLNNVSQLAGFTKRSDLEYFLEKIAGIKYTHIIDMAPTKEILDAYKKNKGDWVVYEQEFLKLMHSREIEKKISKQMLEGSCLLCSEAKPHHCHRRLVAEYLSEKLGN
>NZ_AP018254.1|WP_096626040.1|2232850_2233663_+|carbon-nitrogen-hydrolase-family-protein
MKSYLAAAVQMTSVPDLHKNLAQAEELIDLAVRQGAELVGLPENFAFMGEESDKLAQAAHIAQETEKFLSTMAQRYQVTLLGGGFPIPTDSGKVYNTALLVNPSGQELSRYYKVHLFDVNVPDGNTYRESTTVMAGTKLPDVCVTENLGNIGLSVCYDVRFPEIYRHMSDKGAHILFVPAAFTAFTGKDHWQILLQARAIENTCYVIAPAQTGINYNRRQTHGHAMIIDPWGMILADAGDKIGVAIAEINPQRLEQVRRQMPSLQHRIFN
>NZ_AP018254.1|WP_096626042.1|2233774_2234110_-|c-type-cytochrome
MKRLISVLFAAIAIFTLAFSSPALAGDAASGAKIFSANCASCHAGGKNLVQANKTLQKDALEKYGMYSVEAIATQVTNGKNAMPAFKGRLNATQIEDVATYVYEKATKGWS
>NZ_AP018254.1|WP_096621414.1|2234340_2235450_-|sensor-histidine-kinase-KdpD
MSNSRLYDHGKKRRGKHKIFIGMSPGVGKTYRMLEEGLNLKQEGIDVVIGLLETHGREKTQAKSVGLEIIPPKQLIVSSTVLTEMDTDAIIQRQPQLVLIDELAHTNIPGSRHTKRYQDVEQILDAGIDVFSTLNIQHLESLNDLVLKISGIVVRERIPDRILDDADEVVVVDVTPETLQERLREGKIYAPEKIDQALQNFFQKRNLIALRELALREVADNIEEDGIDSNSDRCYCNIHERVLVCISTYPNSIQLLRRGARIAHYMNAKLYVLFVDNPERFLTRSESLHIETCNRICQDFGGKFLQIRSPDVVSTIIDTAIKERITQIVVGETRRSRWYLLFRGSLVQKLMRSLPDVDLHIIATHKLSS
>NZ_AP018254.1|WP_096621415.1|2235454_2236027_-|K(+)-transporting-ATPase-subunit-C
MRELIIAIRNFFVLWVLTALIYPFLMIFISQTAFPFQANGSLIINSQQQVIGSTLIGQNFSREGYFWSRPSTINYSEGEDYAPTGVSGASNIAPGNPDLIQRIRVQVTKLSSQGIKPTADLLYTSASGLDPHITIEAAIAQIPRVAKSRSLSPDQVQALIAQNTDAPFLGIFGEPSVNVLKLNLSLDNQR

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Crispr_ID: NZ_AP018254_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_25

2332504-2332613

Orphan

Consensus_repeat	Method
CAACCAATTATTGAAGATAGTCAATAGGCTCAAACGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_25

>merge|NZ_AP018254|25|2332504-2332613|CRISPRCasFinder
CAACCAATTATTGAAGATAGTCAATAGGCTCAAACGGTATAAAGGTGGAGGTAAGGGCGAGCCTATAAGAGGCAACCAATTATTGAAGATAGTCAATAGGCTCAAACGGT

>NZ_AP018254|25|25|2332504-2332613|CRISPRCasFinder
CAACCAATTATTGAAGATAGTCAATAGGCTCAAACGGT	ATAAAGGTGGAGGTAAGGGCGAGCCTATAAGAGG
CAACCAATTATTGAAGATAGTCAATAGGCTCAAACGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780697.1\|2335778_2335922_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621488.1\|2334661_2335516_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_AP018254.1\|WP_096621479.1\|2321740_2322013_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380356
NZ_AP018254.1\|WP_096621487.1\|2333765_2334632_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_AP018254.1\|WP_096621483.1\|2325830_2326136_+\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|180318
NZ_AP018254.1\|WP_096621490.1\|2336837_2338418_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018254.1\|WP_157780695.1\|2327199_2327352_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621491.1\|2338639_2340982_-\|protein-phosphatase-2C-domain-containing-protein	unknown	unknown	gnl\|CDD\|237756
NZ_AP018254.1\|WP_096621482.1\|2324215_2325559_+\|adenylosuccinate-synthase	unknown	unknown	gnl\|CDD\|234904
NZ_AP018254.1\|WP_096621485.1\|2328670_2331730_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_AP018254.1\|WP_096621489.1\|2335938_2336619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621477.1\|2320127_2320868_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227801
NZ_AP018254.1\|WP_096621486.1\|2333166_2333676_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|273139
NZ_AP018254.1\|WP_096621492.1\|2343124_2343895_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_AP018254.1\|WP_096626047.1\|2341786_2342929_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621480.1\|2322275_2323022_+\|creatininase-family-protein	unknown	unknown	gnl\|CDD\|224320
NZ_AP018254.1\|WP_096621484.1\|2327587_2328019_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780696.1\|2332164_2332332_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621478.1\|2321193_2321556_+\|Mo-dependent-nitrogenase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|369150
NZ_AP018254.1\|WP_096621493.1\|2344668_2344896_-\|DUF3148-domain-containing-protein	unknown	unknown	gnl\|CDD\|371482

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621488.1\|2334661_2335516_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	9.22489e-99
NZ_AP018254.1\|WP_096621479.1\|2321740_2322013_+\|cupin-domain-containing-protein	gnl\|CDD\|380356	cd02227, cupin_TM1112-like, Thermotoga maritima TM1112 and related proteins, cupin domain. This family includes bacterial and plant proteins homologous to TM1112, a Thermotoga maritima protein of unknown function with a cupin beta barrel domain. TM1112 (also known as DUF861) is a subfamily of RmlC-like cupins with a conserved "jelly roll-like" beta-barrel fold; structures indicate that a monomer is the biologically-relevant form.	4.6802e-35
NZ_AP018254.1\|WP_096621487.1\|2333765_2334632_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	3.79593e-100
NZ_AP018254.1\|WP_096621483.1\|2325830_2326136_+\|50S-ribosomal-protein-L25	gnl\|CDD\|180318	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed.	1.63119e-32
NZ_AP018254.1\|WP_096621490.1\|2336837_2338418_-\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	3.63079e-15
NZ_AP018254.1\|WP_096621477.1\|2320127_2320868_-\|hypothetical-protein	gnl\|CDD\|227801	COG5514, COG5514, Uncharacterized conserved protein [Function unknown].	0.000731877
NZ_AP018254.1\|WP_096621491.1\|2338639_2340982_-\|protein-phosphatase-2C-domain-containing-protein	gnl\|CDD\|237756	PRK14559, PRK14559, serine/threonine phosphatase.	4.55264e-71
NZ_AP018254.1\|WP_096621482.1\|2324215_2325559_+\|adenylosuccinate-synthase	gnl\|CDD\|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_AP018254.1\|WP_096621485.1\|2328670_2331730_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_AP018254.1\|WP_096621486.1\|2333166_2333676_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.77592e-43
NZ_AP018254.1\|WP_096621492.1\|2343124_2343895_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.44382e-70
NZ_AP018254.1\|WP_096621480.1\|2322275_2323022_+\|creatininase-family-protein	gnl\|CDD\|224320	COG1402, COG1402, Uncharacterized protein, putative amidase [General function prediction only].	6.97748e-83
NZ_AP018254.1\|WP_096621478.1\|2321193_2321556_+\|Mo-dependent-nitrogenase-C-terminal-domain-containing-protein	gnl\|CDD\|369150	pfam06967, Mo-nitro_C, Mo-dependent nitrogenase C-terminus. This family represents the C-terminus (approximately 80 residues) of a number of bacterial Mo-dependent nitrogenases. These are involved in nitrogen fixation in cyanobacteria. Note that many family members are hypothetical proteins.	6.26859e-52
NZ_AP018254.1\|WP_096621493.1\|2344668_2344896_-\|DUF3148-domain-containing-protein	gnl\|CDD\|371482	pfam11347, DUF3148, Protein of unknown function (DUF3148). This family of proteins has no known function.	1.48691e-35

>NZ_AP018254.1|WP_157780696.1|2332164_2332332_-|hypothetical-protein
MKTMSANSQTFPEADIIRFILKAVLLKIIPASSLQYLIKLFQLWQRHKSSSISRS
>NZ_AP018254.1|WP_096621485.1|2328670_2331730_-|valine--tRNA-ligase
MNPTTSHPNLPSVYDPKAAETKWQQFWEENQLYKANPNNPSEPYCIVIPPPNVTGSLHMGHAFDNSLIDTLIRYQRMRGKNTLYLPGTDHASIAVQTILEKQLKSENKTRYDIGREKFLERAWEWKKQSEGTIVNQLRRLGVSVDWSRERFTLDEGLSKAVLEAFVTLYNQGLIYRGEYLVNWCPASQSAVSDVEVEKKEVLGKLWHFRYPLSDGSGYVEVATTRPETMLGDTAVAVNPQDERYQSLIGKTLTLPIMKREIPIIADELVEMEFGTGCVKVTPAHDPNDFKMGKRHNLPFINIMNKDGTLNENAGEFAGLDRFVARKQVVSRLETDGFLVKIEDYSHTVPYSDRGKVPIEPLLSTQWFVKIRPLADRALRFLDEQNSPNFVPSRWQKVYRDWLVKVEDWCISRQLWWGHQIPAWYAVSETNGEITDTTPFVVAKSPEEALTLAKQKFGDDVQLERDPDVLDTWFSSGLWPFSTMGWPSLTSDLAKYYPTSTLVTGFDIIFFWVARMTMMAGHFTNQMPFKDVYIHGLVLDENGDKMSKSKGNGIDPLLLINQYGVDALRYYLIKEATGAGQDIRFDYDRKKNESPAVEAARNFANKIWNASRFVMMNLDGQTPAQLGVPQPLELSDRWILSRYNQVIQQTIQYMENYGMGEAANGLYEFIWGDFCDWYIELAKSRLQPGGDENSRRTAQQTLAYVLEGILKLLHPYMPHITEEIWQTLTQQAPDSRQSISLQQYPEANPNLINTDLEAQFELLFGTIRTIRNLRAEADVKPGAKVDIKLQTQSPQEREILTQGQVYIQNLAKVEHLTISGQQINPVSPQTQNPQSKSNQINWRLVGKTFGFLFLFRLLVAIADAIDDIPLAGRFFELIGFLYATWFLAKSWLNPQARDRFWQQAKGLVNNQPEPIPTTEITPDTPAVKQDSEKVIAGVVGTVQVIMPLTGVVDIAAFIEKLQKKLTKIEMEITQLSGRLNNPGFVNNARPDVVQDARDKLSEAQTQAQILRDRILQLSSQ
>NZ_AP018254.1|WP_096621484.1|2327587_2328019_-|hypothetical-protein
MLYLAQVRKNDFLGQFQLLLLARQEAENVWTLIPEEAFILLGKNTTHSEKLLVLVELSPTGDIIKLEEATNWVVNLVKNYLSNGITPEFLRQEAERVEEWRKNLTLQNQDLARRSLELEARREQIQALEENLKRDKNGNSHPQ
>NZ_AP018254.1|WP_157780695.1|2327199_2327352_-|hypothetical-protein
MYAITKDAVRSRKIDNLFKSIKTLNLTILSFAQFLNNFRQILNITDSILN
>NZ_AP018254.1|WP_096621483.1|2325830_2326136_+|50S-ribosomal-protein-L25
MEITVRVEGQMRPEGSKPRALRRSGLIPANLYGHNGAESVSLTLDAKTAERLLKEARANKTPIELNVPEINWRGATVIREVQKHPAKGTLYHLSFFAFAKG
>NZ_AP018254.1|WP_096621482.1|2324215_2325559_+|adenylosuccinate-synthase
MANVIVIGAQWGDEGKGKITDLLSRSADVVVRYQGGVNAGHTIVVKGQTFKLHLIPSGILYPDTECIIGSGTVIDPQVLITELDQLDKLGISTANLFIAENAHVTMPYHRMIDQASEEHRGNYKIGTTGRGIGPTYADKSERTGIRMLDLIDPQGLREQLNWTINYKNAILEKLYDLPPLNPDEVIEQYLGYADRLRPYVVDASLKIYDAVRLRRNVLFEGAQGTLLDLDHGTYPFVTSSNPVAGGACVGTGLGPTIIDRVIGVSKAYTTRVGEGPFPTELDGEIGELLCSLGAEFGTTTGRKRRCGWFDAVIGRYAARINGLDCLAVTKLDVLDQLPEIKVCVAYEIDGERCEHFPASSRRFARCRPIYKTLPGWQVSTENCRTWEDLPRQAQDYLKYLAELMEVPIAIVSLGASRDQTIILEDPIHGPKRALLHADGTPASLLSA
>NZ_AP018254.1|WP_096621480.1|2322275_2323022_+|creatininase-family-protein
MLLHLSTWPEVETYLQTSQGIILPIGSTEQHGPSGLIGTDAICAETIAKGVGERTQAMVAPTINVGMALHHTGFPGTISLRPSTMILFIRDYITSLVKAGFHKFYFINGHGGNIHTLRAAFSEIYTYLEELHYPHAVRVRCQVANWFMCSSVYKLAKELYGDEEGSHATPSEVAVTQFVYPEAIKTAFLSPEVGKGHKIYGSIDFRRRYPDGRMGSNPALATKEHGQQFYHLAVEELSQGYLEFLQGD
>NZ_AP018254.1|WP_096621479.1|2321740_2322013_+|cupin-domain-containing-protein
MEIKIEHQPSSERLQELGISSWPIWQKDVSRFEWTYDSQETCYFLEGDVIVTPDGGKSVTMGKGDLVTFPQGMSCTWEIQSKVKKHYCFE
>NZ_AP018254.1|WP_096621478.1|2321193_2321556_+|Mo-dependent-nitrogenase-C-terminal-domain-containing-protein
MLSTQNKHKQIIFPGFCDFFRETTPSTQQKLKFAKFDLLRPLKNWFDYLEINNRYLAQFIVKTIPSQCPFARDIIVFGRKLAHIPPLCKFNPLYEQFVNLRFRALCYLADECGEDITPYC
>NZ_AP018254.1|WP_096621477.1|2320127_2320868_-|hypothetical-protein
MQKLVYVIQFIQKLLPPRRLRFPLLGLILVVGIVADRSRPVQSSQFDPDPYTYRIVRPQPGVELLEIQPNYGDEEQTFGVKPNWEQPDWSDIAPGQITSPTLIAATSPYIPRSKPNPQISQRNLPQGDGIYLYGQSPRIGENGKGYIVFTKNQGRVVGALYMPNSEYSCFRGSIDETGAIAMTVQGYAGESNPVQVATSGNGVNLDINNINAPSPYAHSLSLTDFYRLQQIGQLEREILQACEFGD
>NZ_AP018254.1|WP_096621486.1|2333166_2333676_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MTLPNWITFSRLLGIPFLLYGLQNPTPQLRWICVVVFLACALTDWLDGYLARKLNQISDLGKFLDPLVDKLLVLAPLLSLIQLGQVPAWGVFIILARELAIAGWRVNQSTISGANIWGKLKTVSQIIAIALLIAPVPSSWDLPAIIAFWLSVALTVISGIIYVVPRPSV
>NZ_AP018254.1|WP_096621487.1|2333765_2334632_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MRRDSIFYKLFQQSPSLLFALLTNPPANADEYIFDSVAVKEAKFEIDGVFLPPQTENPGVVYFCEVQFQKDERLYERVFAESYLYFYRNRDRFSNLQIVIIYPSRSLEQTDISPYQSQLNSPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATAEARNLLTRSQQEVPPAENRAIIELITTIMVYKFEGKSQREVEQMLGITLKETRVYREIKEEGRKEGRKEGRKAEACQLIMRQLTRRVGELPQPVRSQVESLSLEELENLGEALLDFTSMADLDAWLAALKS
>NZ_AP018254.1|WP_096621488.1|2334661_2335516_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MRRDSIFYKLFQQSPSLLFALLTNPPANADEYIFDSVAVKEAKFEIDGVFLPPQTENPGVVYFCEVQFQKDERLYERVFAESYLYFYRNRDRFSNLQIVIIYPSRSLEQTDISPYQSQINSPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATAEARNLLTRSQQEVPPAENRAIIELITTIMVYKFEGKSQREVEQMLGITLKETQVYREIKEEGREEGRKAEACQLIMRQLTRRVGELPQPVRSQVESLSLEKLENLGEALLDFTSMADLDAWLAALNP
>NZ_AP018254.1|WP_157780697.1|2335778_2335922_-|hypothetical-protein
MTIKIKSLIIQLRSHHPAELLMVAFSLSETNLKLFFEIIRELGYVFI
>NZ_AP018254.1|WP_096621489.1|2335938_2336619_-|hypothetical-protein
MANINQNSKNTQHLKSAIHRELLDALLSTEENVIYPWDTNQIETEDFFSAHEANFVMDDVLQAELSSRAESFFNHLDSLWSQLPTSEYHNCNTNVNIIANLKASLQKISSVDLPPSWLETIAAKASEIFNSSQTLGEQLALCANAVLPNWGTDDLLVLARPFAYAMRNGDENHSSTDPQPVASALKKVSDRDWNSLTEIDQARVSLAVAYYALKQLNSNNSTNLSE
>NZ_AP018254.1|WP_096621490.1|2336837_2338418_-|CHAT-domain-containing-protein
MPSLNLAIARLVNAGTDNFAIWVVKSPYPSGHVIHDCIWSPEMEQTWREWQEWFANHSNLGMLPPRDVNSPKPVGEPSAAVGSPQSNYAGRLMQLFGNQLWQWVFDGPILSSLERSRGIAMGQESRLRVCLELRDPSLVAIPWEIMQNPGQSAISLGQQMLFSRTTSDVEPLPELETDPGLNILLVLGEDENLNLDAEADLLEKTLTDGSRMGSSTYGYAPCFVHHLIQPSREKLIAELESNNYNVLFYAGHGSRAANGGVLFLSPGETMSGIELAQVLTRTGVKLAVFNSCWGAQPATINHQSIPYSSLAEVLIRHGVPAVLGMRDEIANTESLCFIQAFAQALRSRKSIDEATAEARRQLLTIYRFNQPAWTLPVLYQHPEFNSQILRSLDETVTELPSNLLPEYQLPPPNAILRSLSADNKVWQLKGRTTHIGRVPENDIVIPDLSVSRHHAKIVCRDTFSDTTFVQTYYLIDDSTYGTYISHPGSIGAWQRIHQTEIKIESGMQLKFGSPRSDGWEFIIGKV
>NZ_AP018254.1|WP_096621491.1|2338639_2340982_-|protein-phosphatase-2C-domain-containing-protein
MEKDAVTVYCPNELCQAANPMTNRFCQQCSTPIPQRYLWGVGEGKNVGNAGEILGDRYYVVKQSILLDCKPGLLPQIPDLDNLQTLRPYLRLFPYRLHVPQVYGVLWLEENGQRREIILLEKPPLQLRDGDTEVRLHPSIDTAWGQASSMRQLHWLWQIAQLWQPLASEGVVSSLLDPLLLRTEGGILRILQLRADGEKPPRLAALGEFWRVHLLHKCQQAIANFVDGICQSLDNGEIHSGEQLVAVLDRGLQEIGRHQSVNVEIITQTDTGPQRQRNEDACYPPSGTRLRKPPQSKALAIVCDGIGGHEGGNVASNLAIETIQTQVQQLTDFRYDHIDPNLLLADLEATTGIANDKISQRNDSEQRSGRQRMGTTLVMALGIAHEMYITHVGDSRAYLITQHGCYQVTIDDDVASREVRLGYALYHDAVSQPASGSLVQALGMGSSNSLHPTAQRFIVDEDCVFLLCSDGLSDFDRVEQNWETEILPIINENKDIGTVISRLVEIANTQNGHDNVTVAIVRNQVNYAEPSEPISPQLISLAAATSNEYKQSNVTVNLNPTPNQRTQVLPDTVQIKSRKIPFYLLILPLFLLLAGAVYWVVSSSLGSQTPLNSQNNESPANNPSTTGKTIPTPLNSPSPEILPGYQVETRTELQANFLPVSSTNPPSSPYPVTLPQGTVLKVLDRKLEQDSPESSQQVYTLSMEICQIPPLPPVSKPPEITLPKLNVGSKVSIPSDKLVNKVSYSNSADLSNSPCSKLSSTTEGELIPKQPVTSDRQQGL
>NZ_AP018254.1|WP_096626047.1|2341786_2342929_+|hypothetical-protein
MQHIDKLLVTENSNLAWVLRLGLLGLRTQLQQARNQATVSDPGIEKCDALLRELDVMLEPNSSISSSIQSATPKPLQWEDVFEPVASDFQLASLAMTLKSDPELKPYIGEYEFASDNDGDLWNEIQRLLLRLPERLVLIWRRRLQEILPTLDTQEDTQTRKLLPFTRSELIYPGLTGKIQTSGLALSDKIAIAPQLLKSKSSSDTDIDFLAAVVSTCLKFIQLDAQLFHVLKSVDRFGIRPVHTEPERSKYATALIERFRRVQSTTHSTDPAVTLRARLDLDEAIHSLVYMPPCDRYSWWGKLQGEARRTLDPVIERTRNAGYQIQIRPLWGTYADVYTWSKDDLQINCGGVPGEVAACLRVYAKINDEVLPGRVLFYAA
>NZ_AP018254.1|WP_096621492.1|2343124_2343895_-|NYN-domain-containing-protein
MQLHPRPQMNQETRLKLEAEQSLEPRRLKVLDKMEASQQRRRRLLDERDRVAIFIDGANLFYAAMQLNLEVDYAKLLRRLTGDRQLIRAYFYTACDSGNEKQQGFLLWMSRNGYRVVTKELIQFPDGSKKANLDVEIAVDMLTLARNCDTIVLLSGDGDLAYAVNSIAYQGVQVEVVSLSSMTSESLVNVADFFIDLEEIRVDIEREKKVPENGLETRGQTGAFGVTPRLRSTNEAELNTHVEVQTVRREGQIRNS
>NZ_AP018254.1|WP_096621493.1|2344668_2344896_-|DUF3148-domain-containing-protein
MSKEFTINSKVRVTSLPAYLKTADTMPMLRPPDLISIGEEGVVIDRRPGEYWVVKFTRGSFLLESQYLEAVPPTP

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Crispr_ID: NZ_AP018254_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_26

2397325-2397424

Orphan

Consensus_repeat	Method
TCCCTACTCCCTACTCCCTGTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_26

>merge|NZ_AP018254|26|2397325-2397424|CRISPRCasFinder
TCTCTATTCCCTACTCCCTACTCCCTGTATTCATGTAGTGCAGTTTCTCTTTGAGAATAACAGAGACTTTCTCCCACTCCCTACTCCCGACTCCCTGTAT

>NZ_AP018254|26|26|2397325-2397424|CRISPRCasFinder
TCTCTATTCCCTACTCCCTACTC	CCTGTATTCATGTAGTGCAGTTTCTCTTTGAGAATAACAGAGACTTTCTCCCAC
TCCCTACTCCCGACTCCCTGTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621522.1\|2386995_2387835_+\|nitrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|130251
NZ_AP018254.1\|WP_096621525.1\|2391001_2392048_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_AP018254.1\|WP_157780700.1\|2393202_2393340_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620005.1\|2403756_2405115_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|373239
NZ_AP018254.1\|WP_096621527.1\|2393364_2395509_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018254.1\|WP_096621535.1\|2407208_2408132_+\|TIGR04168-family-protein	unknown	unknown	gnl\|CDD\|275026
NZ_AP018254.1\|WP_096621534.1\|2406475_2406982_-\|DNA-processing-protein-DprA	unknown	unknown	gnl\|CDD\|376794
NZ_AP018254.1\|WP_096621537.1\|2409854_2410775_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_AP018254.1\|WP_096626053.1\|2396176_2396605_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621536.1\|2408332_2409043_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_AP018254.1\|WP_096621528.1\|2395566_2395908_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621523.1\|2387936_2389952_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|130252
NZ_AP018254.1\|WP_096621526.1\|2392406_2392925_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_AP018254.1\|WP_096621524.1\|2390064_2390907_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|130252
NZ_AP018254.1\|WP_096621532.1\|2402512_2403178_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096621531.1\|2399213_2400518_+\|bifunctional-ornithine-acetyltransferase/N-acetylglutamate-synthase	unknown	unknown	gnl\|CDD\|235441
NZ_AP018254.1\|WP_096620005.1\|2400909_2402268_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|373239
NZ_AP018254.1\|WP_096621529.1\|2396820_2397204_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370551
NZ_AP018254.1\|WP_096621538.1\|2410840_2412358_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096621533.1\|2405502_2405916_-\|MAPEG-family-protein	unknown	unknown	gnl\|CDD\|226211

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621522.1\|2386995_2387835_+\|nitrate-ABC-transporter-permease	gnl\|CDD\|130251	TIGR01183, Nitrate_transport_permease_protein_NrtB, nitrate ABC transporter, permease protein. This model describes the nitrate transport permease in bacteria. This is gene product of ntrB. The nitrate transport permease is the integral membrane component of the nitrate transport system and belongs to the ATP-binding cassette (ABC) superfamily. At least in photosynthetic bacteria nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA, ntrB, ntrC, ntrD, narB. Functionally ntrC and ntrD resemble the ATP binding components of the binding protein-dependent transport systems. Mutational studies have shown that ntrB and ntrC are mandatory for nitrate accumulation. Nitrate reductase is encoded by narB. [Transport and binding proteins, Anions].	1.1994e-108
NZ_AP018254.1\|WP_096621525.1\|2391001_2392048_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.70758e-118
NZ_AP018254.1\|WP_096621533.1\|2405502_2405916_-\|MAPEG-family-protein	gnl\|CDD\|226211	COG3686, COG3686, Predicted membrane protein [Function unknown].	2.83205e-31
NZ_AP018254.1\|WP_096621527.1\|2393364_2395509_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	3.65078e-38
NZ_AP018254.1\|WP_096621536.1\|2408332_2409043_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.04757e-65
NZ_AP018254.1\|WP_096621534.1\|2406475_2406982_-\|DNA-processing-protein-DprA	gnl\|CDD\|376794	pfam02481, DNA_processg_A, DNA recombination-mediator protein A. The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyze the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation.	7.9336e-05
NZ_AP018254.1\|WP_096621537.1\|2409854_2410775_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.90529e-09
NZ_AP018254.1\|WP_096621529.1\|2396820_2397204_-\|hypothetical-protein	gnl\|CDD\|370551	pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid). Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.	1.82792e-05
NZ_AP018254.1\|WP_096621535.1\|2407208_2408132_+\|TIGR04168-family-protein	gnl\|CDD\|275026	TIGR04168, Ser/Thr_protein_phosphatase_family_protein, TIGR04168 family protein. Members of this uncharacterized protein family are restricted, in 49 of 50 genomes, to organisms with a family TIGR04167 radical SAM protein, which occasionally is a selenoprotein.	2.94897e-159
NZ_AP018254.1\|WP_096621523.1\|2387936_2389952_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|130252	TIGR01184, Nitrate_transport_ATP-binding_protein_NrtC, nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase. [Transport and binding proteins, Anions, Transport and binding proteins, Other].	6.03133e-151
NZ_AP018254.1\|WP_096621526.1\|2392406_2392925_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	2.48142e-99
NZ_AP018254.1\|WP_096621524.1\|2390064_2390907_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|130252	TIGR01184, Nitrate_transport_ATP-binding_protein_NrtC, nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase. [Transport and binding proteins, Anions, Transport and binding proteins, Other].	5.49118e-149
NZ_AP018254.1\|WP_096620005.1\|2403756_2405115_+\|IS4-family-transposase	gnl\|CDD\|373239	pfam14706, Tnp_DNA_bind, Transposase DNA-binding. This domain occurs at the C-terminus of transposases including E. coli tnpA. TnpA encodes a transposase and an inhibitor protein, the inhibitor only differs from the transposase by the absence of the N-terminal 55 amino acids, which includes most of this domain. This domain consists of alpha helices and turns, and functions as a DNA-binding domain.	2.13308e-21
NZ_AP018254.1\|WP_096621531.1\|2399213_2400518_+\|bifunctional-ornithine-acetyltransferase/N-acetylglutamate-synthase	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_AP018254.1\|WP_096620005.1\|2400909_2402268_-\|IS4-family-transposase	gnl\|CDD\|373239	pfam14706, Tnp_DNA_bind, Transposase DNA-binding. This domain occurs at the C-terminus of transposases including E. coli tnpA. TnpA encodes a transposase and an inhibitor protein, the inhibitor only differs from the transposase by the absence of the N-terminal 55 amino acids, which includes most of this domain. This domain consists of alpha helices and turns, and functions as a DNA-binding domain.	2.13308e-21
NZ_AP018254.1\|WP_096621532.1\|2402512_2403178_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.02539e-21
NZ_AP018254.1\|WP_096621538.1\|2410840_2412358_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.5737e-16

>NZ_AP018254.1|WP_096621529.1|2396820_2397204_-|hypothetical-protein
MNLNNFQFYLANLRPWLTLLIIAWFLGSIGLGWLVNSIIVIIGIMAIAPVVAFLGLRWWLQRNLVTSQCPVCGFEFMGLNHSNIQCPNCGEHLTVDGGKFTRIAPEGTIDVAAVEVQTQVLSEGDGE
>NZ_AP018254.1|WP_096626053.1|2396176_2396605_+|hypothetical-protein
MNKHIRLIGVSVGLAISLLLMQINTAQAQKVSISRNFQPNPLTLTGTSGGAVRSNCGNLAATPNHIIEIKEPLRLNFSVAGAGEPTLLIEGPAGRFCSLSDSYSGGKSEISGYWIPGDYTVHVGQSSQSRSNYTLSISQPKK
>NZ_AP018254.1|WP_096621528.1|2395566_2395908_-|hypothetical-protein
MERQPEDDLQRSLNELESSSALVVAQSQQIVPPSPSANGAIASLWAVVSWFLNLPLVAKIGVIGGGMVLGFAIFQAVLKLIASVIGVTLLLGLAYLAYKFFVSDTGQNQQNQQ
>NZ_AP018254.1|WP_096621527.1|2393364_2395509_-|pentapeptide-repeat-containing-protein
MTTPIVRRTTNKSIRSQEPGKPKMLPLMTRRAAAVVTEIALVTVSGLVPFGIGVLANSRTDVERVPLNPVLSLVEREVARPLALPINYGTRNVTWLTNFFWSVGALASLSLTGWQIYLLAKTGSTLPKRWFGVRVVTNGGTPPGLLAVVIREGVGRWALPLSVTYLLWRYSPFFPNLGVFTGLMAVLMLAESMGFPRWRDSKRALHDRIAGTYTIDATKPFSVASLRAGKPQPDQWNEHEEEAAIADVVISPLGDRRRQVWEWMRQNPSLTLFLVALVSMVGVLGTLIGTQIYIQSQENQRTTEQGNRQQFQELEKRLQGTATTNLAERQQAIMAMGTLKYPPATKYLVDLLLQETNPVLRSTIQQSLVNIGIEAIPELKRKNQLLTNDLATNNPAKAQQLQANQQAINQILLVNRGKLHQVDLSQTNLSQPNTGTNPNTSFNLVLERIDLWGVNFKGAQLNQGNFPGSRFRGPGNDGRYDTYDDWIADLSQAELKQANFQEANLSRVLLNKSDLSRANLKKANLASARLIGANLSSAQLVGADLRNAVLENASLTGADLGEAKLNEAELFGARLGRAIAIGAFLSHANLTKTDWLGADLSGAYLDHTNLSSANLSATRLTGAVLRGANLSNANLSNADLSLADLQRTNLRGADFQGAILAPGNQNPTEQFVETPQTGAKSALVKGVDFSEVKNLDKRQIAYICTQGGIHPSCP
>NZ_AP018254.1|WP_157780700.1|2393202_2393340_+|hypothetical-protein
MCNFTLNWYKTISYSRLPIPTLTLQTFSATRLIKGYYQPFLTHQN
>NZ_AP018254.1|WP_096621526.1|2392406_2392925_-|adenine-phosphoribosyltransferase
MDLKSLIRDIPDFPKPGILFRDVTTLLRNPQGLRYTIDLLAQKCDEANFQVDYVIGMESRGFIFGTPLAYQLEAGFIPVRKPGKLPGAVHSVEYELEYGTDKLEIHQDALESGSKVLIVDDLIATGGTASATAQLVQNMGCELLGFGFIIELRDLEGRKQLPDVPIISLVEY
>NZ_AP018254.1|WP_096621525.1|2391001_2392048_-|ABC-transporter-permease
MTVTRDGWELRLNRIYGWLTSETVLYIAKRLFQALITLFLASALSFLIIQLAPGDFVDTLKQNPRITPERIAEIRQQWGLDKSWVEQYFLWIWRIISKGDFGTSFIFQRSVSSLIGERVFSTLLLAVSSLIITWAIALPLGIVAAVNQNRLPDRLLQVISYAGQGFPSFITALLLLIFAQVTSPLFPVGGQTSINHDQLTWFGQIIDVAWHMILPTVALSITSFAGLQRITRGELLDVLRQDYIQTARAKGLPENRVIYVHALRNAINPLITLLGFELAGLLNGAFIAEYFFNWPGLGRLTLQALQAQDLYVLMASLTMGAVLLILGNLIADLLLKAADPRIRLEDLN
>NZ_AP018254.1|WP_096621524.1|2390064_2390907_+|ATP-binding-cassette-domain-containing-protein
MQAINTTQTHQPSSPDSNPFLTIEGVTKIYPTANGPRVVLDGINLSVQEGEFICVIGHSGCGKSTLLNMVSGFNQPTEGQVRLQNRVITGPGPDRMMVFQNYCLLPWMSVFENVYTAVDAVFPQKAEAEKRAIVKEHLAMVGLLEAADKRPGQISGGMKQRVAIARALSIRPQVLILDEPFGALDAITKEELQEELLKIWRDHRVTVLMITHDIDEALFMADRLVMMTNGPAAKIGEILEIPFPRPRIRTRIMEDPQYYDLRNYALDFLYNKFAHDDAAE
>NZ_AP018254.1|WP_096621523.1|2387936_2389952_+|ABC-transporter-substrate-binding-protein
MLTNIDKPQKTTNTFVEIDHVDRVFNLPNGGQYIALKNIELKIQQGEFISLIGHSGCGKSTLLNIIAGLDRATTGGVTLEGREVREPGPDRMVVFQNYSLLPWLTVRENIAIAVDEVFKNKPAGERRQIVEHHIDLVGLRHAANSRPCELSGGMKQRVSIARALAIRPKLLLLDEPFGALDALTRGSLQTQLMKICNEHQLTCVMVTHDVDEALLLSDRIVMLTNGPEAHIGQILEVPIPRPRDRLEVIKHPSYYGLRNEMIYFLNQQKQAKKRQAAKVSTPGIISKHGLEKINLDIGFIPLTDAAPLIIAQEKGFFAQFGLEQVTLHRESSWKEVAKGVGTGRLDAAQMVAGMPLALTLGAGDKTPVPVVTAMTLSRNGNAITLSQKLQQKGVNSLSDLKTVLQADTEKNHVLGIVHPASMQNLLLRYWLAAGGIDPDRDVELTVISPPQMVSALRSGTIDGYCVGGPWNTHAVRDQVGFVAATALDIWGEHPEKVLGVREDWAEKYPQTHIALVKALLSACEYCDDIRNRPEIAEILARPEYVGVATDCIRPGFIDPYERGDGTEAEFLPSYNQFFVNKANYPERVEMLWILTQLARWGLVPFPKNWVDVVDRICRTDVFGVAARDLEILDIGRDQPIHIFDGKAFNPSHPIDYLKSFPIKREIRIQEF
>NZ_AP018254.1|WP_096621522.1|2386995_2387835_+|nitrate-ABC-transporter-permease
MATTTIRKPSQSKIQKSLVTFLQKRGRKIISPLIAIALFLIIWQIACSGEKPNLPPPTKVIQETWDLIIDPFFDNGGTDKGLALQIFASLGRVAIGFSLAAIVGVSLGMVIGANAFIFEAVDPIFQVLRTVPPLAWLPISLAAFRDSEPSAIFVIFITAIWPIIINTTVGVQQIPQDYKNVAQVLKLSGFKYFYKIVFPASVPYIFTGLRIGIGLSWLAIVAAEMLVGGVGIGFFIWDAWNSTRLSEIVLALVYVGIVGLILDRMIAFIASKVVPQEQK
>NZ_AP018254.1|WP_096621531.1|2399213_2400518_+|bifunctional-ornithine-acetyltransferase/N-acetylglutamate-synthase
MTEWQVISGGVTAPRGFRAAGVTAGLKPSGLPDLALIVSDVDAIAAGVFTTSHVCAACIDYCKEILRSHQSVRAILCNAGQANAATGKTGMDNARESAQLLANELNISPNQVLLASTGVIGQQIKMAAMRTGIPQVVAALSPTGAESAERAIITTDLVTKSIALETTIGDRTVRIGGMAKGSGMIHPNMATMLAFVTCDAAVSPHLWQQMVTEAADKSFNAITVDGDTSTNDCLIALANGESRAHAITEKGPEADRLAGMLTAVCQHLAKAIARDGEGATCLIEVRVNGAPSELGARQVAKAIAGSSLVKSAIFGRDPNWGRIAAAAGRAGVPFDQNNLRIQLGDFLLMEHGQPLSFDRSAASEYLKNAADAYPGGMTANSGSKDLADKPTKIHQSLDKPVVITVDLGAGHDCGVAWGCDLSYDYVKINAEYTT
>NZ_AP018254.1|WP_096620005.1|2400909_2402268_-|IS4-family-transposase
MEKWAARELKHLDLGDKRRNKRLIKMVEDLAAQPTSSVPQACGSVAATTAAYDLWSSPYIKPSDISNGHIKSTIERAKEHEIVLAIQDTTNMDVTSHPATEGIGYLDQRKSLGLKVHSTLLSSIKGVPLGVIDQQVWSRNIEDLGIAKTRRKRQTEEKESQRWLEGLERTNKLLPEKIKIITVADSEADIFDLFNQERPENSHLLIRGTHNRKVSHTANYLHEAIRSSPTQGEVEVKVRRNPERPERIAKLTIRYETVEIEVPKNKLGRSLCKPVKLQVILAEEKSPPSEIKPISWLLLTTLEINSLEDAVKCVEWYTYRWLIERYHYTLKSGCRIEELQLETGKRLSMALATYSIVAWRLLWLTYQARDNPEQSCETVLTTVEWQSLCVSVNKNPIPPDQPPTLREAVRMIARLGGFLGRKGDGEPGVKTIWRGLRRLHDIAVTWKLAHQI
>NZ_AP018254.1|WP_096621532.1|2402512_2403178_-|Uma2-family-endonuclease
MIISLEQTHPSNLITERHGASWQDYLSVRDNPEGKWRKISFHQGWLWVDMGTEGPNHASFSDLMTIIFGFWAFLHPEESLQSYGRCLIEKPQTQACAPDLVLYKGENIPKWQPGVKRRIDLASDRIPDLVGEIADTTLSIDLDEQKQLYASLGIQEYWVIDTKGMRLFAFGLGETGKYTEITQSQVLTGLPIALVEQTLERLGTETNTAAANWFMQQLQQY
>NZ_AP018254.1|WP_096620005.1|2403756_2405115_+|IS4-family-transposase
MEKWAARELKHLDLGDKRRNKRLIKMVEDLAAQPTSSVPQACGSVAATTAAYDLWSSPYIKPSDISNGHIKSTIERAKEHEIVLAIQDTTNMDVTSHPATEGIGYLDQRKSLGLKVHSTLLSSIKGVPLGVIDQQVWSRNIEDLGIAKTRRKRQTEEKESQRWLEGLERTNKLLPEKIKIITVADSEADIFDLFNQERPENSHLLIRGTHNRKVSHTANYLHEAIRSSPTQGEVEVKVRRNPERPERIAKLTIRYETVEIEVPKNKLGRSLCKPVKLQVILAEEKSPPSEIKPISWLLLTTLEINSLEDAVKCVEWYTYRWLIERYHYTLKSGCRIEELQLETGKRLSMALATYSIVAWRLLWLTYQARDNPEQSCETVLTTVEWQSLCVSVNKNPIPPDQPPTLREAVRMIARLGGFLGRKGDGEPGVKTIWRGLRRLHDIAVTWKLAHQI
>NZ_AP018254.1|WP_096621533.1|2405502_2405916_-|MAPEG-family-protein
MSFLALPTSQILLYAIAAGAISIYFPYLFVAYARFQVGFDMAAPRALFDKLPPYGQRATWAHQNCFEGFMIFAAAALMAYVTGVDSTSAKIAAIAFVVARFLFSIFYILNIPPLRSLMFGVSSFCSGTLFVLSILNS
>NZ_AP018254.1|WP_096621534.1|2406475_2406982_-|DNA-processing-protein-DprA
MSQSIDLINNIDTLAQELATIQQTGSKRIAMLGSRHVPITHQNLIEMMTYALVLAGNRIITSGATGINSAAIKGAMRADPNALTVILPQSLERQPLESRQQLEQVMHLVENPSNDGLSLAEASYLCNKEIISRCQQLICFAYHDSRTLLQTCRDAEEQRKVVTLFYFD
>NZ_AP018254.1|WP_096621535.1|2407208_2408132_+|TIGR04168-family-protein
MTSHLKSLKIAVIGDVHDQWEIEDELALKRLEVDLALFVGDFGNESVEVVRQIAALNIPFAAIMGNHDAWFTATEWGRKKCPYDRSKEDWVQLQLDLLGEAHVGFGKLDLPAFNLTVVGSRPFSWGGPEWKFADLCRERYGVNDLDASAAKIFASVKQAQYETIIFVGHNGPSGLGDRPEDPCGKDWHPIGGDYGDPDFAEAISQSLTFGKTIPLVTFGHMHHTLRHTKKHIRKRVFRSPEGIIYLNAACVPRILERGNHKLRNFSLVTLEDNKVTKAASLWIDQNMNVEEEILYTEPVSLVSTGQI
>NZ_AP018254.1|WP_096621536.1|2408332_2409043_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MLYLRNLSYHPTACPAPILNNINLELAPKQLGLIIGPSGSGKSTLLEILSGLAEPTSGAMFWHEQELIPEQMQQLAGLVFQFPERHFCGRTILEELRLGHPELTSDRVREALSAVGLENISLNAPPHALSGGQQRRLALAVQLIRQPHILLLDEPTAGLDWSMRRQLVKLLAQLKQNWTLLVVTHDAGDLLDIADNCWKIKQGEITALTRNILNLGQVKNPNLSLENKEQGVGSRE
>NZ_AP018254.1|WP_096621537.1|2409854_2410775_+|tetratricopeptide-repeat-protein
MAVRFPLPPSSLLPSKIVHSAMGFFLTLVLTTAPSLAGDPFRPTQSRHIGDKTEAAFNQVFRYGNYQAAATILQDAIASETDEPLAFAMQASFAYTNKDMAGLATYAEKTLSAAQRLVSRDALRGNLYMAVGHFLEGAVILSREGTVSGAPQALSKLRRVYEYLDKAEAISPQDPELNLIKGYMDLMVAVNLPFANPEQAIARLEKNAAPRYLVDRGIAIAYRDLKNYDKALTYVERALKDTKENPELHYLKAQILRAKARDDKNKQMMETAIAFFDQALAKRDQLPPGLVRQIERERRNSASSLI
>NZ_AP018254.1|WP_096621538.1|2410840_2412358_-|HAMP-domain-containing-histidine-kinase
MYKWILPSIGEVLATYTSTQGRWLQTSVTMLEQEKGETVTDTDLSAKAEYQWRISIAAIEKLLLNYLPLTSNYRKHGFVFVTPAPVFSHPLITEQLETITFSNQGFNRLALMPFSTSHDTCIPSPDSTIPSERVLPLLPVDPITQECFCLVLTEEFSVVLVLTDNPKTGKEFQFSFDPDVVNQVWQALAGRVKLVNPNWCDKLDHLIQPYLELEPDYRIVSQFSQLLLSQIPHHSSENIHPQRPESQISNTPQESLRDRTPPSRIDAELLQAFAHEVRTPLATIRTLASLILRQKDLPANLIKRIQMIERECLEQIDRMELLFRAAELETSTNTKNPSTHLTPMCLEQVLQQSIPRWQQFATRRNLTLDVVLPQKLPTVVSNPNMLDRMLTGLIENFTRSLPSGSHIQVQVIPAGDQLKLQLLPLPQSDTDTSQNNTTPPLRKAIGELLMFQPETGTISLNLTATKHLFQAIGGKLIVRQRPQYGEVLTIFLPLEGVDHPQSVAG

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Crispr_ID: NZ_AP018254_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_27

2496286-2496370

Orphan

Consensus_repeat	Method
CGTAATAGCCTGCGGCAACGCTTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_27

>merge|NZ_AP018254|27|2496286-2496370|CRISPRCasFinder
CGTAATAGCCTGCGGCAACGCTTCGCGTACGTAATTCCCGCTACGCGGGAATCAAGCTACGTAATAGCCTACGGCAACGCTTCGC

>NZ_AP018254|27|27|2496286-2496370|CRISPRCasFinder
CGTAATAGCCTGCGGCAACGCTTCGC	GTACGTAATTCCCGCTACGCGGGAATCAAGCTA
CGTAATAGCCTACGGCAACGCTTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621634.1\|2500943_2502791_+\|amidoligase-family-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621632.1\|2499396_2500041_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP018254.1\|WP_096621641.1\|2507802_2508510_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096621620.1\|2490520_2490961_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_AP018254.1\|WP_172892772.1\|2497533_2497995_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341362
NZ_AP018254.1\|WP_096621617.1\|2489045_2489300_+\|sulfurtransferase-TusA-family-protein	unknown	unknown	gnl\|CDD\|238180
NZ_AP018254.1\|WP_096621639.1\|2506029_2507664_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|100087
NZ_AP018254.1\|WP_096621629.1\|2496913_2497339_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|238182
NZ_AP018254.1\|WP_096621619.1\|2489300_2490359_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237040
NZ_AP018254.1\|WP_096621626.1\|2494744_2496118_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143418
NZ_AP018254.1\|WP_096621636.1\|2503146_2504754_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|223520
NZ_AP018254.1\|WP_096621625.1\|2493730_2494492_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018254.1\|WP_096621631.1\|2498048_2498720_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_AP018254.1\|WP_096621638.1\|2505040_2505904_+\|Tab2/Atab2-family-RNA-binding-protein	unknown	unknown	gnl\|CDD\|368938
NZ_AP018254.1\|WP_096621614.1\|2485820_2487050_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_AP018254.1\|WP_096621622.1\|2490988_2492062_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_AP018254.1\|WP_096621623.1\|2492603_2493617_+\|7,8-didemethyl-8-hydroxy-5-deazariboflavin-synthase-subunit-CofG	unknown	unknown	gnl\|CDD\|180485
NZ_AP018254.1\|WP_096626061.1\|2485122_2485335_+\|DUF2555-domain-containing-protein	unknown	unknown	gnl\|CDD\|371217
NZ_AP018254.1\|WP_096626065.1\|2508935_2510177_+\|inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
NZ_AP018254.1\|WP_096621616.1\|2487906_2489049_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237663

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621632.1\|2499396_2500041_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.29121e-50
NZ_AP018254.1\|WP_096621641.1\|2507802_2508510_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	2.03201e-28
NZ_AP018254.1\|WP_096621620.1\|2490520_2490961_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	2.9071e-87
NZ_AP018254.1\|WP_172892772.1\|2497533_2497995_+\|CBS-domain-containing-protein	gnl\|CDD\|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.69286e-59
NZ_AP018254.1\|WP_096621617.1\|2489045_2489300_+\|sulfurtransferase-TusA-family-protein	gnl\|CDD\|238180	cd00291, SirA_YedF_YeeD, SirA, YedF, and YeeD. Two-layered alpha/beta sandwich domain. SirA (also known as UvrY, and YhhP) belongs to a family of bacterial two-component response regulators that controls secondary metabolism and virulence. The other member of this two-component system is a sensor kinase called BarA which phosphorylates SirA. A variety of microorganisms have similar proteins, all of which contain a common CPxP sequence motif in the N-terminal region. YhhP is suggested to be important for normal cell division and growth in rich nutrient medium. Moreover, despite a low primary sequence similarity, the YccP structure closely resembles the non-homologous C-terminal RNA-binding domain of E. coli translation initiation factor IF3. The signature CPxP motif serves to stabilize the N-terminal helix as part of the N-capping box and might be important in mRNA-binding.	3.9225e-21
NZ_AP018254.1\|WP_096621639.1\|2506029_2507664_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|100087	cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP018254.1\|WP_096621629.1\|2496913_2497339_-\|universal-stress-protein	gnl\|CDD\|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.67329e-26
NZ_AP018254.1\|WP_096621619.1\|2489300_2490359_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237040	PRK12289, PRK12289, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_AP018254.1\|WP_096621626.1\|2494744_2496118_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143418	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.	0
NZ_AP018254.1\|WP_096621636.1\|2503146_2504754_-\|Hsp70-family-protein	gnl\|CDD\|223520	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones].	3.69378e-100
NZ_AP018254.1\|WP_096621625.1\|2493730_2494492_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.06002e-20
NZ_AP018254.1\|WP_096621631.1\|2498048_2498720_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	2.17942e-21
NZ_AP018254.1\|WP_096621638.1\|2505040_2505904_+\|Tab2/Atab2-family-RNA-binding-protein	gnl\|CDD\|368938	pfam06485, DUF1092, Protein of unknown function (DUF1092). This family consists of several hypothetical proteins of unknown function all from photosynthetic organisms including plants and cyanobacteria.	3.62412e-151
NZ_AP018254.1\|WP_096621614.1\|2485820_2487050_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NZ_AP018254.1\|WP_096621622.1\|2490988_2492062_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	9.59414e-127
NZ_AP018254.1\|WP_096621623.1\|2492603_2493617_+\|7,8-didemethyl-8-hydroxy-5-deazariboflavin-synthase-subunit-CofG	gnl\|CDD\|180485	PRK06245, cofG, FO synthase subunit 1; Reviewed.	1.97452e-171
NZ_AP018254.1\|WP_096626061.1\|2485122_2485335_+\|DUF2555-domain-containing-protein	gnl\|CDD\|371217	pfam10742, DUF2555, Protein of unknown function (DUF2555). This family is conserved in Cyanobacteria. The function is not known.	3.01525e-29
NZ_AP018254.1\|WP_096626065.1\|2508935_2510177_+\|inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	6.0469e-46
NZ_AP018254.1\|WP_096621616.1\|2487906_2489049_+\|molecular-chaperone-DnaJ	gnl\|CDD\|237663	PRK14293, PRK14293, molecular chaperone DnaJ.	0

>NZ_AP018254.1|WP_096621626.1|2494744_2496118_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MAIRSINPATGELLKNFTDDSDREIERKLDLAQSAFRDYKQTPMTLRSQYLKGVAEILTDSKSEFAKIMTLEMGKTYKSAIAEVEKCALVCRYYAENAADFLADVEVKSDATKSWVKYQPLGVILAVMPWNFPFWQVFRFAAPALMAGNVGLLKHASNVPQCALAIAEIFQQAGLPEGVFQTLLIGGEKIASLISDDRIQAATLTGSEPAGASLASGAGKCIKKTVLELGGSDPFIVLPSADLANATATAVTARMLNNGQSCIAAKRFIVIDSIADQFEQLFLEKFQTLKVGDPMQDDTDIGPLATPDILQDLDQQVKMAVEAGAKVIYGGKSLPELGGNYYQPTILTNVPIDSDIAKEEFFGPVAMLFRVPDIDAAIALANATPFGLGASGWTRDETEMNRLINELEAGAVFINGMVKSDPRLPFGGIKRSGYGRELSIQGIHEFVNIKTVWVKGF
>NZ_AP018254.1|WP_096621625.1|2493730_2494492_+|tetratricopeptide-repeat-protein
MYNEDEFDLRISGEDIATTPLGLNIDRLINSVSSNPPNYLQNNLHNLTSDASADCFSWYHQGNRLEDAGYYDEAVSCYQQALRLEPQLICAWNRLGAIFCDYLQRYEDALACFNQALRLNYLDDLTWYNRGNVLEMMECYEDAIASYDLAIKLNPDDEGSWYGRGWSLYCLGELNDAITSFQQAISLKPSDDSAWYNQACCYALQGHVTQAVRCLRQAIQLSPNQYRHMAKTEADFDEIRIAPEFCDLMGEIG
>NZ_AP018254.1|WP_096621623.1|2492603_2493617_+|7,8-didemethyl-8-hydroxy-5-deazariboflavin-synthase-subunit-CofG
MVDFQSRIVTYSPAFTIVPTYECFNRCSYCNFRVDPDAGKLIELSKVQEILTRLQNQPVCEILILSGEVHPQSSRRQTWLQRIYDVGKLALQMGFLPHTNAGILSFAEMEKLKQVNASMGLMLEQVTPKLLQTVHKHAPSKVPSIRLQQLEWAGLLKIPFTTGLLLGIGENQADWIDSLQAIRDIHLRYQHIQEVILQPHSPGKQQTFTASTFHPHLLPDVVALAREILPLEITIQIPPNLVSDQQWLLACLEAGARDLGGIGPKDEVNPDYAYHTTAKLQELLYPGGWILKPRLPVYSRIDDSIPQELQPNIFKWVEQFEQWVHQNRKIETPISVK
>NZ_AP018254.1|WP_096621622.1|2490988_2492062_-|GTP-binding-protein
MQAVTPESSVQSPLDAPKQGMPVTIITGFLGSGKTTLLNHILSNQKGLKTAVLVNEFGEIGIDNELIVSTEDNMVELSNGCICCTINNDLVDAVYQVLERPEKVDYLVVETTGIADPLPVALTFLGTELRDLTRLDSIITVVDAANYSLDLFNSQAAYSQIAYGDIILLNKTDLVSDSELERLEKSINEIKEDARIIRTRNSQVPLPMILSVGLFETDKYFRTQVEHNHDHHHHDHDHSNCSHEHHDHEHHHHHSQHLENDGFMSVSFQSDQPLSIRKFQYFLDNLLPVNVFRAKGILWFEESPKRHIFHLCGKRFTMDDDEWKGDKKNQLVLIGQNLDEKTLLQQLQDCVQGLDNS
>NZ_AP018254.1|WP_096621620.1|2490520_2490961_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRVVIQRVKSSQVRVDGEIVGKIDRGLNLLVGICATDTEKELDWMARKCLELRLFPDDDSDRWQKSVQEINGEILVISQFTLYGDCRKGRRPSFDQSANPCVAENLYNSFVEKLRASKLRIETGKFGAMMEVEIINDGPVTLILER
>NZ_AP018254.1|WP_096621619.1|2489300_2490359_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MMVENIETQLLGTVVAVQANFYQVQLDQPVASPFLLCTRRTRLKKIGQQVMVGDRVCIENPDWQGGRGAICEVLPRKSQLDRPAIANVNQILLVFAVADPPLEPLQLSRFLVKAESTGLQVSLCLNKIDLIAPSEQEQIRDRLRNWGYDPILISANLGINVDTLLTQLKGKITVLAGASGVGKSSLINTLIPSLSLRVGEVSGKLAKGRHTTRHVELFPSPHGGLIADTPGFNQPDLDTPPHQLINYFPEAKQFLATDTCRFSDCLHRDEPGCVVRGNWERYEHYLIFLEEAILHHQQRQQQTNPEASIKFKTKQKGTSYYEPKLETKKYRQKSRRTQLQELEIQYQEAEED
>NZ_AP018254.1|WP_096621617.1|2489045_2489300_+|sulfurtransferase-TusA-family-protein
MSVSPAPIPNEYLDLRGTPCPLNFVRTKLYLEKMPPGSLLEVWLDPGEPIEQVPDSLTMSGYQVENIINHAEYFSLLVRRPVAL
>NZ_AP018254.1|WP_096621616.1|2487906_2489049_+|molecular-chaperone-DnaJ
MARDYYEILGIGRDADKEEIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPEMRQRYDRFGEAGVSGAAAGAGGFQDMGDMGGFADLFESIFSGFAGGGMGGPSPRRRSGPVRGDDLQLDLKLDFREAIFGGEKQIRIAHLETCEVCSGTGAKPGTRPRQCSTCGGSGQVRRVTRTPFGSFTQVSTCPTCNGTGTVIEEKCDACGGRGTNQVAKQLKITIPPGVYDGLRLRIPSEGDAGQRGGPPGDLYVQLSVNEDSEFQRDDLNILSSVTISYLQAILGCRFQVNTVDGPEELTIPPGTQPNTVLRLENRGVPRLGNPVSRGDHLITILIDIPTKITPEERELLEKLAKIKGERTGKGGLEGFLGNLFHQR
>NZ_AP018254.1|WP_096621614.1|2485820_2487050_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MTIPSQRVLIGVCGGIAAYKVCEVVSQLFQRGVEIRVILTNAAREFIQPLTFSTLSRHRAYTDADFWQPIYSRPLHIELGEWADLIVIAPLTANTLAKLAYGMADNLLTNTVLASPSPVLVAPAMNTDMWEQPTVQDNWQKLLRYNRYHAIDTASGLLACDRVGAGRMAEPGEIISYVESLLHTHGKRDYQGQRVLISAGGTREFLDPVRYIGNPSTGKMGLALAQAAQHRGASVTLISSSHLNFPLGVRGISVVSAEEMHSVMLRELPNQNVIIMSAAVADVKPRDFSPQKLPKHALGENLSLTSVPDIVADLAKHKQPQQILVGFAAQTGDILTPAREKLQKKQLDAIIANPIDQPDSGFQSDTNQAIFLDRQEFIQEIPQCSKLKMAHIIYDLLGKRFHRHSDRLP
>NZ_AP018254.1|WP_096626061.1|2485122_2485335_+|DUF2555-domain-containing-protein
MKTLSISRQDIAAMTAKDVEALATRLESDNYSNAFESLNDWHLLRAIAFQRPELVESYVHLLDLEPYDEA
>NZ_AP018254.1|WP_096621629.1|2496913_2497339_-|universal-stress-protein
MLNTILVALDGSELADRVMQMVEQLSLGKNTKIILCHVFPTDKTELDIPADRPHPESHALTYISIEKQLETYQAKLAFPTEIELVTGEPAEEIIRLANIHKADLIVIGNRGLVGMNRIVQGSVSSQVMEEAHCSVLVVKPR
>NZ_AP018254.1|WP_172892772.1|2497533_2497995_+|CBS-domain-containing-protein
MVKTVADVMTCDPIVVGLQTPLNEAIQILASKRISGLPVVDEAGKLLGIISETDLMWQEAGITPPAYIMFLDSVIYLKNPAAYERDLHKVLGQTVGEVMTKNPITISPDKPLRDAARLMNEKNVHRLPVLDSEGKVIGILTRGDIVRAMAAIA
>NZ_AP018254.1|WP_096621631.1|2498048_2498720_+|HEAT-repeat-domain-containing-protein
MSITPESVQELLASEDLGDRLRAVNQIRTLEPAAGFELLQTAIQDHHARVRYAAISQMDTLGGQNPQLSLEILRDRLLNDKEPDVQAAAADCLGALKLTAAFEDLYQLYHSTSEWLIQFSIIAALGEMGDPRAFELLQQALNSDNELVQTTAIRALGELGNPAAIPLLVPYANNSDWQVRYSVACALNLLNQQGDDAAKSTLATLAEDEIAAVAEEAQRGLNV
>NZ_AP018254.1|WP_096621632.1|2499396_2500041_-|response-regulator-transcription-factor
MSLKILVVDDDFSTCISINDYLELCGYEVMVAGDGEKALAIAESNPIDLIVTDIIMPRMNGYELVRRLRQNPNLGVLPVILLTARNQTQERILGYESGCDLYLPKPFELEELGAAIRNLLKRSQFLQSVYQESGHDELDSEQKSRETLLAEPFTKREREVLSLLCQGLSNADMGRKLHLSPRTVEKYVSSLLHKTNNSNRSQLVRFAIQHGLVE
>NZ_AP018254.1|WP_096621634.1|2500943_2502791_+|amidoligase-family-protein
MVSSIDFIRDSCISHLTEEYPTVTLVANGAEIEFLPLTDFPIVRLSSQIVAKLRPIYQLYKSENKLLSRQPAFFRLVQMLVTVALINFHARRQFPEDSRYFAKLNRQDFEKHKAALLKQAQKYDAKAALKLQSHPHYLNPDLNFQQQRLGWLDVTKKSIYRLIRILDNFLYHRQSDRHNSENSWDDNNCNSVNLEELIIQICERIENLNLVARPGENTLVVGIDGSVHGTNPANIQAYERLYRTHQDTRFNFRIYSGQEIGFPVCNSIEETNQIYDFVVTTLKKYGVNFTTTAGVHLHVNVSNSSLSVEDTIAQIGNTTIATAAVSQVLENILPTTRRQNTYAMTFADQVEGHICRHQRPLSKLEYVQKKVKMMQQAVLSDADLLLDKNAAIYEFILGLTYGIAPIQHEYNYQQIIAINSKSPPEIIRQASIIARNPRYTSINITPFLQDPNKPTYEWRVLASCEDSQLQGKLMTFLYRVISYQYQVQRTEVITDHNHNLDYLYFYYPDGRVRTIQNSLWDWLDFTDCLELFTAADFDKINNPDYWQAYDIKNQQYLDLDANQYWATGQFYPAPIITDFPLELGQDNYLNHYSEIQEPIEQDRAILDFLNFVFDI
>NZ_AP018254.1|WP_096621636.1|2503146_2504754_-|Hsp70-family-protein
MAIAIDFGTSNTVIARWNSATGQAETLNIPNLSLQQGLNPPLIPSLVYVEDATLGKILVGQQVRDRGLDIASDARFFRSFKRGIGTDIQGFLPELDGQTITFEQVGEWFLSQVIHQLRNSYTEVEDSLILTTPVDSFETYRHWLGRVCQSLPVEQVRIIDEPTAAALGYGLTEEEILLVVDFGGGTLDLSLVQLDQGVQGVSGGKPIGFLLKWGNKSLAEDSKQKVKTARVLAKAGQNLGGTDIDNWIVDYFAQNQGLSPNAFTTRLAERIKIQLSSAHQASEVYFDEDSLETYELELNRDRLENILQTNGFQDRLNASMTSLLQQARRQGVEITDISAVLLVGGTSQLPAFQTWIREYFEDSKILSQRPFEAIAQGALQIAQGLEIKDFLYHSYGIRYWDRRNNRHAWHPIIPAGQPYPMNNPVELALGASRENQPSIELIMGELGADTGGTEVYFDGDRLITRRVDTGVTSVKPLNDSEGARTIAKLTPPGFPGSDRIKIRFMVDEQRFLRISVEDLLTNDMLLENQIVAQLS
>NZ_AP018254.1|WP_096621638.1|2505040_2505904_+|Tab2/Atab2-family-RNA-binding-protein
MGSIWELDFYSRPILDENQKKVWEVLICESPQSVNDDWKNLFRYAQYCPSTEVNSVWLRNAIQTAVTQAGTAPMRIRFFRRQMNNMITKACNDAGIAVQPSRRILVLHQWLQERMETVYPNEPGFQGGTNPSVRLDAPLPQRLPDALESEKWGFVTLAASDFTDMPDWEIGFAEGFPLSLTGISPETKIPGILLFSARALPVAAWMSGLELAYLRFDPGQGGQMLLETGATESWILASVRNPQLLTQAQNFETAKQAANGVHFLGIQDNPESEAFTGFWLLQEVQLP
>NZ_AP018254.1|WP_096621639.1|2506029_2507664_-|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MTIQTIATTPFSDQKPGTSGLRKAVSVFQQPHYLENFVQSIFDAIGNCTGATLVLGGDGRFYNRQAIQIILKMAAANGFSLVKVGQRGILSTPATSCVIRKYHTLGGIILSASHNPGGPNGDFGIKYNIGNGGPAPEKITEAIYARSKVIDTYKILDSQDVNIDTLGETKLGSMTVEVIDSVSDYQALMESLFDFDALQQLLTNGKFRICIDALHAVTGPYAHAIFEKRLGAPVGTVMNGVPLEDFGGGHPDPNLVYAHDLVERLFGEYAPDFGAASDGDGDRNMILGRKFFVTPSDSLAILAANATLVPGYAGGLAGIARSMPTSQAPDRVAAKLGIDCYETPTGWKFFGNLLDAGKATLCGEESFGTGSNHIREKDGLWAVLFWLNILAVRQQSVEEIVRAHWQEYGRNYYSRHDYEAIDSQRADTLMKNLQGILPSLPGKKYGSYEVEYSDNFSYTDPVDGSVSTNQGVRIGFTDGSRIVFRLSGTGTQGATLRVYLESYEPDVSKQDIETQQALGDLIQIADEIAQIKVNTGMDKPTVIT
>NZ_AP018254.1|WP_096621641.1|2507802_2508510_-|Uma2-family-endonuclease
MTTNINHQSRFNTQQIPPLENGDRLTRPEFERRYKAAPHIRKAELIEGIVYVASPLRFQQHAEPHSRLSTWLGTYVVYTPGTLSGIEPTIRLDLDNEPQPDIVLILDQAVGGRSYLTEDGYLEGVPELIVEIAASSAAIDTGSKKQVYRRNGVSEYIIWQSFENQLDWYSLQAEEYRLLPVNEQGIICSQRFPGLWLAVDALLNNQMARVLEVLQLGLNSPEHQQFVAQLGAKSD
>NZ_AP018254.1|WP_096626065.1|2508935_2510177_+|inorganic-phosphate-transporter
MTILVISLAFYFALNLGANDVANAMGTSVGSQAITLKQALIIAGILEFAGAVLFGEGVTGTLATKIVNPSQFADTPSVLVLGMVAVLISCGGWLQIATLLGLPVSSSHAVVGAIAGFSWVGLGLDGVNWHSLGLITLGWLILPVMSGAIAALFYSQIRHWILDTHQPWERLNEWIPWLSTILVGVLGIIILPQMTQPLQTLLHQYLTWEIPTSTITLIIVALLSLGLSIYLWQLLTRLESPSNFSPEVIFSRYQVCSACCVAFAHGSNDVGNAIAPLATILTIQRFGAIPQSQIEIPLWILILGGLGIVTGLALLGKNVITTVGEGIINLQPSDGFCAELATATTILLASNLGLPASTSHALIGGVVGIGLVKNPHLVKFTNLYSIFTAWVVTVPISAGLAAISFSVLRIFLI

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Crispr_ID: NZ_AP018254_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_28

2592626-2592807

Orphan

Consensus_repeat	Method
CTTGAAATTAACTATTTCCCCGCAAGGAGACTGAAACT	PILER-CR

2 spacers

csa3

The CRISPR arrays of NZ_AP018254_28

>merge|NZ_AP018254|28|2592626-2592807|PILER-CR
CTTGAAATTAACTATTTCCCCGCAAGGAGACTGAAACTCAAGCCTAAAGACAGGATTGAAGATTATAAACCACTTGAAATTAACTATTTCCCCGCAAGGGGACTGAAACTGTGGGGAAGATTCCGTAGGAGAGCTTTGCTAAATCTTGAAAATAACTATTTCCCCGCAAGGCGACTGAAACC

>NZ_AP018254|28|7|2592626-2592807|PILER-CR
CTTGAAATTAACTATTTCCCCGCAAGGAGACTGAAACT	CAAGCCTAAAGACAGGATTGAAGATTATAAACCA
CTTGAAATTAACTATTTCCCCGCAAGGGGACTGAAACT	GTGGGGAAGATTCCGTAGGAGAGCTTTGCTAAAT
CTTGAAAATAACTATTTCCCCGCAAGGCGACTGAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621738.1\|2593337_2593865_-\|DUF2518-family-protein	unknown	unknown	gnl\|CDD\|371212
NZ_AP018254.1\|WP_157780708.1\|2585939_2586152_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_AP018254.1\|WP_172892773.1\|2591498_2591882_-\|CZB-domain-containing-protein	unknown	unknown	gnl\|CDD\|379331
NZ_AP018254.1\|WP_096621735.1\|2590559_2591342_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_AP018254.1\|WP_096621742.1\|2598238_2599234_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_AP018254.1\|WP_096621744.1\|2599863_2600355_-\|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl\|CDD\|213038
NZ_AP018254.1\|WP_172892774.1\|2592189_2592369_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_157780836.1\|2586795_2588046_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223523
NZ_AP018254.1\|WP_172892775.1\|2606454_2607120_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621726.1\|2581131_2581467_-\|DUF4870-domain-containing-protein	unknown	unknown	gnl\|CDD\|378240
NZ_AP018254.1\|WP_096621730.1\|2586324_2586732_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238042
NZ_AP018254.1\|WP_096621747.1\|2601482_2603423_+\|glycine-oxidase-ThiO	unknown	unknown	gnl\|CDD\|214380
NZ_AP018254.1\|WP_096621727.1\|2582074_2582809_+\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|215175
NZ_AP018254.1\|WP_096621746.1\|2600446_2601127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621748.1\|2603712_2604699_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_AP018254.1\|WP_096621740.1\|2594092_2595319_-\|DUF790-family-protein	unknown	unknown	gnl\|CDD\|368530
NZ_AP018254.1\|WP_096621732.1\|2588567_2589263_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_AP018254.1\|WP_096621741.1\|2595800_2597600_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|222980
NZ_AP018254.1\|WP_096621750.1\|2605229_2605493_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_AP018254.1\|WP_096621734.1\|2589416_2589959_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621738.1\|2593337_2593865_-\|DUF2518-family-protein	gnl\|CDD\|371212	pfam10726, DUF2518, Protein of function (DUF2518). This family is conserved in Cyanobacteria. Several members are annotated as the protein Ycf51. The function is not known.	3.94606e-85
NZ_AP018254.1\|WP_157780708.1\|2585939_2586152_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.04331e-11
NZ_AP018254.1\|WP_172892773.1\|2591498_2591882_-\|CZB-domain-containing-protein	gnl\|CDD\|379331	pfam13682, CZB, Chemoreceptor zinc-binding domain. The chemoreceptor zinc-binding domain (CZB) is found in bacterial signal transduction proteins - most frequently receptors involved in chemotaxis and motility, but also in c-di-GMP signalling and nitrate/nitrite-sensing. Originally discovered in the cytoplasmic chemoreceptor TlpD from Helicobacter pylori, it is often found C-terminal to the MCPsignal domain in cytoplasmic chemoreceptor proteins. The CZB domain contains a core sequence motif, Hxx[WFYL]x21-28Cx[LFMVI]Gx[WFLVI]x18-27HxxxH. The highly-conserved H-C-H-H residues of this motif are believed to coordinate zinc; mutating the latter two histidines of the motif to alanines abolishes Zn binding. This domain binds zinc with high affinity, with a Kd in the femtomolar range. This domain has been shown in E. coli to be a zinc sensor that regulates the catalytic activity of pfam00990.	1.19391e-11
NZ_AP018254.1\|WP_096621735.1\|2590559_2591342_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	2.88582e-29
NZ_AP018254.1\|WP_096621742.1\|2598238_2599234_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.07063e-46
NZ_AP018254.1\|WP_096621744.1\|2599863_2600355_-\|YajQ-family-cyclic-di-GMP-binding-protein	gnl\|CDD\|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	9.31653e-84
NZ_AP018254.1\|WP_096621741.1\|2595800_2597600_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|222980	PHA03095, PHA03095, ankyrin-like protein; Provisional.	8.90316e-40
NZ_AP018254.1\|WP_157780836.1\|2586795_2588046_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	1.80751e-41
NZ_AP018254.1\|WP_096621726.1\|2581131_2581467_-\|DUF4870-domain-containing-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	2.07611e-19
NZ_AP018254.1\|WP_096621730.1\|2586324_2586732_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.07585e-12
NZ_AP018254.1\|WP_096621747.1\|2601482_2603423_+\|glycine-oxidase-ThiO	gnl\|CDD\|214380	CHL00162, thiG, thiamin biosynthesis protein G; Validated.	2.5395e-155
NZ_AP018254.1\|WP_096621727.1\|2582074_2582809_+\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|215175	PLN02309, PLN02309, 5'-adenylylsulfate reductase.	7.66498e-139
NZ_AP018254.1\|WP_096621748.1\|2603712_2604699_-\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	6.74093e-109
NZ_AP018254.1\|WP_096621740.1\|2594092_2595319_-\|DUF790-family-protein	gnl\|CDD\|368530	pfam05626, DUF790, Protein of unknown function (DUF790). This family consists of several hypothetical archaeal proteins of unknown function.	0
NZ_AP018254.1\|WP_096621732.1\|2588567_2589263_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.20436e-89
NZ_AP018254.1\|WP_096621750.1\|2605229_2605493_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	2.00605e-21
NZ_AP018254.1\|WP_096621734.1\|2589416_2589959_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	2.03621e-30

>NZ_AP018254.1|WP_172892774.1|2592189_2592369_+|hypothetical-protein
MIRLRCGFIFNCTYLLRMVIWVCRSGIHIPLSSDRIYHYDYDIDDIAGKIAVGNLWLSW
>NZ_AP018254.1|WP_172892773.1|2591498_2591882_-|CZB-domain-containing-protein
MKEMLFRALSSHAVWKDRLKKAIDNGILDSPVAVIREDNLCEFGKWLYSSEISGNFHQSEYYQQVVIAHADFHQVAAEVAMLAEMGEREKAKRMMLLGQPYMVKSGKLMNVIITWIKELSNSIPSPK
>NZ_AP018254.1|WP_096621735.1|2590559_2591342_+|sulfite-exporter-TauE/SafE-family-protein
MLINLLGHLLAVCIGISLGLIGGGGSILAAPVLIYVMSVPSKSAFAMTLVIVGVASVIGAIPHWQQGNVNLNTVALFSPASMLGAYLGAKLASQPFVSPTLQLVTFGVMMLIASVAMIRKGNNQSKDAAEKDESHHLHSLLPPWLAIALEGLVVGVITGFIGIGGGFLVIPALVLLGKTPMKEAVGTSLIILALKSVTGFAGYLSGNIPILWDLLVSFTVAASGGILIGAYLNRFVSAKQLEKGFGYFVLAVAIFVLIKR
>NZ_AP018254.1|WP_096621734.1|2589416_2589959_+|rhodanese-like-domain-containing-protein
MSQQIMGDRLKTIDPYTLKEQLEKEAVILVDVREPSEHAGEKIPGSLLMPLSSFEPARVPMDKNKPTVLYCRTGNRSAQAAQKLFAAGVSEVTHLEGGLSAWIQSGCPTQVNKNAPISIMRQVQIVAGSLVVLGTVLGAFVSPWFLILSGFIGSGLVFAGITDTCALGMLLAKMPWNQRF
>NZ_AP018254.1|WP_096621732.1|2588567_2589263_+|MBL-fold-metallo-hydrolase
MLFRQLFDYESYTYTYLIADLNTKEAALVDPVIEQVERDYKLLQELGLTLKYCIETHVHADHITGTGKLRELTGCEGIVPENANVDCASRLIKDGEILKVGEIEIKAIATPGHTDSHMAYLVNQDRVLTGDALFIRGCGRTDFQSGDAGTLYDSVTQKLFSLPEDTLVYPGHDYRGHSVSEIGEEKRCNPRFIDRTREQFIEFMGNLNLPDPKKMMEAVPANQQCGNAVAA
>NZ_AP018254.1|WP_157780836.1|2586795_2588046_-|FAD-dependent-oxidoreductase
MTAQQRHHQIVIVGGGAAGITIASHLCKGKRGLDIVIVEPSDKHYYQPGWTLVGGGIAPLSKFIRGEKDVIPSGVSWIQERVVKLDPDQNTVITEGGISIKYDYLVVCPGIQIDWHLIKGLPEALGKGGVTSNYSKDYAPYTWETIQNFRGGNAIFTYPATPIKCGGAPQKIMYMADDIFKSKSGVGVNTTVMFCTAGGSMFAVPEYSLTLDQVVARRGIVAKFKHNLKEIKADTQEAIFDVTTENGVEEVSIHYDMIHVAPPMSAPDFVKQSPLAGANGWVEVDKYTLQHTRYANVFSLGDASSLPTSKTAAAVRKQAPVAAKNLLALMQSKPLTAKYDGYTCCPLITGYHSAIMAEFAYDGTLAPSFPLDPTKERYSMFLAKAHVLPWLYWNRMLKGKGFEADIFKPINKLVHR
>NZ_AP018254.1|WP_096621730.1|2586324_2586732_+|winged-helix-turn-helix-transcriptional-regulator
MPAQAIKQSINIEEKVDKCRISKLTPQALGMVAEFFKVLSEVSRLQIVCSLKTGAKNVTEIIAETELGQANVSKHLKILTQAGIVGREQRGVCVYYHIANPFLFELCDLVCEALAIQVEQQSQQLQQLSKLRQGV
>NZ_AP018254.1|WP_157780708.1|2585939_2586152_+|metalloregulator-ArsR/SmtB-family-transcription-factor
MDWTTNLKRLEEMADRFRVMSDPTRLRILAVLGEQELSVQDICDRTGFKQSNVSKHLRVLREIEAIAHQR
>NZ_AP018254.1|WP_096621727.1|2582074_2582809_+|phosphoadenylyl-sulfate-reductase
MVATHNNLNISALEAEYSHKSPREILKFALENFDNLAISFSGAEDVILVDMASKITSNFRVFTLDTGRLHPETYQFLDEVRKHYGIKIEVMFPDAAEVQALVEEKGLFSFYEDGHKECCSIRKVKPLRRKLNTLDAWVTGQRKDQSPGTRAQIPVIEVDSAFSTPDHQLIKFNPLANWSSAQVWEYIRALEVPYNKLHERGFISIGCEPCTRPVLPNQHEREGRWWWEEATKKECGLHAGNLEK
>NZ_AP018254.1|WP_096621726.1|2581131_2581467_-|DUF4870-domain-containing-protein
MDEKKQRQLFSALCHASPLLSFLLLTVIVPIIIMAVTDDSIVKANAREAINFFINLFVYGIVAFLLTFVFIGVLLYPVLFIVSIVFPIIAVIKVLENPETIYRYPFIFRLF
>NZ_AP018254.1|WP_096621738.1|2593337_2593865_-|DUF2518-family-protein
MFTPDDFLKYAQWMGIGTIFLAVITILGFILKWGIRFRLVGTTGFMLVLTAGLFSLSLAPITRTVIPGATRYNLVYDNGSNQAVITVPLTITNSQLDATLRQAASNLYSYGRSGIGGDNQLTIRARVVLHPEPGVSVPLYIGQVKRSLLTREDENMSVEIFTDKLAQLTQASIGS
>NZ_AP018254.1|WP_096621740.1|2594092_2595319_-|DUF790-family-protein
MLPTDLLMYRQNGEQIIPKRLPIDAHHLQLTSELIDCFQNHVGRTQGELERQLIELEGEATDYRIKRGIAYLLKSGFSTFEIVSPLEPQMLREKVFRQAAKSPPGLESRQTTLIQIADQLSQELQQEVLPEQVKQGLYADLAENRILTNFEIPTPEAILHRYNLSQVQGIFYKASQLIINAHRNVPGQYKLLFRYLKLFQLMAYIEGDADHGFTITIDGPTSLFTPSTRYGLAIAKMIPAILHVSKWSLAAKLQIRDVFSGNWKPGRYTLNSADCGLVTHYPPGKPYDSMLEAAFAERWDSLKSEWILEREVDLIPIPGSVMIPDFRLVHPDGRTFLLEIVGYWRPEYLQKKFAQVRRSECDNLILAISERLNLDKVGVKIQDVPARIVWFKDKLSPKSVLSAILEGV
>NZ_AP018254.1|WP_096621741.1|2595800_2597600_-|ankyrin-repeat-domain-containing-protein
MMKLNYKLSPNLLSKIFLITLTTVGTVVIMPRIVESQTPKKTTNSVSPFCQTLSEKFGPFGNGTPDLYVALERAIAKGGDLNQPCNMFGEKWLPLNFLLSTNEALAQRLIQQGVNVNARDGKGDTPLHYVGASTKTTQLLLNRGAKVNVRNQDGNTPLHNVFGQKNAAVIKLLLDRGAQVNARNKEQMTPLHFAANSGKADITQLLIRSGADINARSNQNWTPLHYGAANPEVAKLLIQAGANLTIQNSQGAVIHSNSLEPAVLKLLLDRGVNVNLRNRQGQTPLHVHRFRPDLVKLLLARKAQVNLRDAQGRTPLFDVNLEVARLLVAANADLNIQDNLGRTPLHQAVLEEQSSFGPELVTLFLSKNARVDIKDKQGKTALDLARQLNKTQIVNLLEQHIAVTKSPGGGTTTTKATTKLQQLLSAKNWKAADQETRRLLSPQKDPFGPNPKTIPLNLIQEIDQAWLKASGGRFGFSVQARIWRQAVAAHPKNNEAAVNAFRDRVGWKIPTPRREQDFISSDWRNESELNYSLQAPVGHLPWAGVADADVRSVAVPPPGHHCGSCTVDAMHLRHGRFYTYLPQLFARVTTALNSSASKK
>NZ_AP018254.1|WP_096621742.1|2598238_2599234_-|Gfo/Idh/MocA-family-oxidoreductase
MYKSSAFLQTGRLGVGLIGTGYVGKLRAEAFNADTRVNLVGVAGRTPEKVAAFAENYQTQAVSSWQELIEREDVDLVVVCSANHERNAIANAAIDAGKHLVIEYPLALNYNEAEAIIARARANNLFLHVEHIELLGGVHQTIKENLEQVGEVFYVRYNTIKPENPAPRKWTYHHEYFGFPLIGALSRLHRLTDLFGEVFTVNCHQRFWQVEEDYYQGCFCIAQLSFQSGLLGQIIYAKGETLWQAERKFEVHGEKGGLIFHEDGGYLVHTGETIPIAIGDRRGLFAKDTNMVIEHLFNGTPLYITPEQSLYTLKVATAAQRSAETGLTIVV
>NZ_AP018254.1|WP_096621744.1|2599863_2600355_-|YajQ-family-cyclic-di-GMP-binding-protein
MASTYSFDIVSDFDRQELVNAIDQVCRDIKSRYDLKDTNTTVELGETKITVNTDSEFTLQAVHTILREKAAKRNLSQKIFEFGKIESASGNRVRQEITLKKGISQDIAKQISKLIRDEYKKVQASIQSDAVRVSAKSKDDLQAVMQRVKQEDYPVALQFTNYR
>NZ_AP018254.1|WP_096621746.1|2600446_2601127_-|hypothetical-protein
MNFRIFSSIVSILSVAVISLPRNNVSAFPPLQSQNSPNQPQITAQTTVRPNRIIVPGKSVGQITKRTKRADLAKLFPSSRFKDEQVLFFGGEVEMPGTKVTIGKNEIIVLWTNKSRNQAAGVMILDPTWQTPEGVGVGTTLAKLRQLAGREFKMTGFGWDYGGIPQLRNTKLKYDNLTIQMTFSETASQKYPQQVQKVSGDHELLSNNPNLRNLDVRIFRIIAMFE
>NZ_AP018254.1|WP_096621747.1|2601482_2603423_+|glycine-oxidase-ThiO
MASDFVVVIGGGAIGLAIAIEMKLRGWNVTVVRRNLAAAALGAAAGMLAPDAERVSPGPMRDLCWRSRRLYPVWVSKLEELTGKDCGFWACGILTPVYQPTSEQPVGGYWLDKDTVYTYQAGLGEGLVGAWWYPDDAQVDNRQLSQVLHLAAQSLGVEMQDGVNVEGLITETGKVTGLQTSVGTITADHYILAGGAWSGQLMPLPVRPIKGQMLRVRVPHHIGELPLTRILFGEGIYIVPRKNRQIIIGATSEDVGFHEGNTPQGIQQLLQQATHLFPPLATYPIEEFWWGFRPTTPDELPILGASPWSNLTLATGHHRNGILLAPITAQLIADAITSTPDPLLQHFHYQRSFKQPMSTILSTHTANFPNGQPKQSFTPPAPILDSPLEIAGKKFTSRLMTGTGKYRSIPEMQQSVISSGCEIVTVAVRRVQTNAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIRVARLGREMAKLLGQEDNNFVKLEVIPDPKYLLPDPIGTLQAAEQLVKEGFAVLPYINADPMLAQRLEEVGCATVMPLAAPIGSGQGLKTTANIQIIIENAHIPVVVDAGIGAPSEAAQAMEMGADALLINSAIALAENPVAMAFAMNAATVAGRIAYLAGRMPIKSYASPSSPVSGTVS
>NZ_AP018254.1|WP_096621748.1|2603712_2604699_-|carbohydrate-kinase
MSNPRVLCLGEVLFDCLADQLGKPLDEVESWTPYPGGAPANVACALVKLGISAGFIGAVGEDAPGNDLVKLLTDVGVEIAGVQRHPTAPTRQVYVVRSLSGDRNFAGFGDYDTAEFADTRLDGSKIPEWLFQAADVLVFGTLELAYPESGQAVRRALELAQKYDLKIILDVNWRPVFWHNQEAAPPIIRELFPYVDFIKLAKEEAEWLFNSTDPGAIKNRLDSVEGVLITDGENGCTYCLDESEGQVPAFKVDVVDTTGAGDSFLAGFTHQLLTRGVKALGNPQIAEQAIIYASAVGALTTLKPGAIASQPTLQEVDAFLQGRVGSWE
>NZ_AP018254.1|WP_096621750.1|2605229_2605493_+|helix-turn-helix-transcriptional-regulator
MAGGESQTPVSLSDRELQIIDLVAAGLTNQEIAARLEISKRTVDNHISNILTKTQTDNRVALVRWALHWGKVCLDDVNCCSLPNPNE
>NZ_AP018254.1|WP_172892775.1|2606454_2607120_+|hypothetical-protein
MNTSDASMVNFSLLNPFNLLNPDLAAPSTSVDAEILKHLSFIPGLKELILLRQVHALEHATVWILSEMKTPRRSHRIARHFQVDNELLGGLSTDRGFYLYGDVNISDLRRAVNLALHKLTHGEENLAIHPRCGTNVSVSMLLTAGLAVGMHLLLPRGPMEQLIGLGIATAIAAEITPEVGALVQKYVTTAIPFNLQVENITLSRDIWGKEAHFVRLNWKER

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Crispr_ID: NZ_AP018254_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_29

2605742-2605847

Orphan

Consensus_repeat	Method
TAATTTGTAATAGCCTACGGCAACGCTTCGCGTACGTAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_29

>merge|NZ_AP018254|29|2605742-2605847|CRISPRCasFinder
TAATTTGTAATAGCCTACGGCAACGCTTCGCGTACGTAATACCCGCTACGCGGGAAGCAAGCTACGTAATTTGTAATAGCCTGCGGCAACGCTTCGCGTACGTAAT

>NZ_AP018254|29|28|2605742-2605847|CRISPRCasFinder
TAATTTGTAATAGCCTACGGCAACGCTTCGCGTACGTAAT	ACCCGCTACGCGGGAAGCAAGCTACG
TAATTTGTAATAGCCTGCGGCAACGCTTCGCGTACGTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621738.1\|2593337_2593865_-\|DUF2518-family-protein	unknown	unknown	gnl\|CDD\|371212
NZ_AP018254.1\|WP_096621753.1\|2609034_2610321_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341039
NZ_AP018254.1\|WP_096621762.1\|2615332_2615566_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621742.1\|2598238_2599234_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_AP018254.1\|WP_096621760.1\|2614578_2615235_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096621757.1\|2612433_2612658_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_AP018254.1\|WP_096621744.1\|2599863_2600355_-\|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl\|CDD\|213038
NZ_AP018254.1\|WP_096621754.1\|2610615_2611584_+\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|133424
NZ_AP018254.1\|WP_096621741.1\|2595800_2597600_-\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|222980
NZ_AP018254.1\|WP_096621758.1\|2613063_2614371_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NZ_AP018254.1\|WP_096621748.1\|2603712_2604699_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_AP018254.1\|WP_096621763.1\|2615726_2617811_+\|flavin-dependent-dehydrogenase	unknown	unknown	gnl\|CDD\|223717
NZ_AP018254.1\|WP_096621747.1\|2601482_2603423_+\|glycine-oxidase-ThiO	unknown	unknown	gnl\|CDD\|214380
NZ_AP018254.1\|WP_096621746.1\|2600446_2601127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626075.1\|2607365_2608370_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|223515
NZ_AP018254.1\|WP_096621740.1\|2594092_2595319_-\|DUF790-family-protein	unknown	unknown	gnl\|CDD\|368530
NZ_AP018254.1\|WP_096621756.1\|2611580_2612447_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_AP018254.1\|WP_172892774.1\|2592189_2592369_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621750.1\|2605229_2605493_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_AP018254.1\|WP_172892775.1\|2606454_2607120_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621738.1\|2593337_2593865_-\|DUF2518-family-protein	gnl\|CDD\|371212	pfam10726, DUF2518, Protein of function (DUF2518). This family is conserved in Cyanobacteria. Several members are annotated as the protein Ycf51. The function is not known.	3.94606e-85
NZ_AP018254.1\|WP_096621753.1\|2609034_2610321_-\|MFS-transporter	gnl\|CDD\|341039	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily. AmpG acts as an inner membrane permease in the beta-lactamase induction system and in peptidoglycan recycling. It transports meuropeptide from the periplasm into the cytosol in gram-negative bacteria, which is essential for the induction of the ampC encoding beta-lactamase. The AmpG family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.40999e-119
NZ_AP018254.1\|WP_096621742.1\|2598238_2599234_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.07063e-46
NZ_AP018254.1\|WP_096621760.1\|2614578_2615235_-\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.20663e-13
NZ_AP018254.1\|WP_096621757.1\|2612433_2612658_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	0.00269566
NZ_AP018254.1\|WP_096621744.1\|2599863_2600355_-\|YajQ-family-cyclic-di-GMP-binding-protein	gnl\|CDD\|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	9.31653e-84
NZ_AP018254.1\|WP_096621754.1\|2610615_2611584_+\|malate-dehydrogenase	gnl\|CDD\|133424	cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	3.83846e-175
NZ_AP018254.1\|WP_096621741.1\|2595800_2597600_-\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|222980	PHA03095, PHA03095, ankyrin-like protein; Provisional.	8.90316e-40
NZ_AP018254.1\|WP_096621758.1\|2613063_2614371_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	6.07255e-46
NZ_AP018254.1\|WP_096621748.1\|2603712_2604699_-\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	6.74093e-109
NZ_AP018254.1\|WP_096621763.1\|2615726_2617811_+\|flavin-dependent-dehydrogenase	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	1.06495e-09
NZ_AP018254.1\|WP_096621747.1\|2601482_2603423_+\|glycine-oxidase-ThiO	gnl\|CDD\|214380	CHL00162, thiG, thiamin biosynthesis protein G; Validated.	2.5395e-155
NZ_AP018254.1\|WP_096626075.1\|2607365_2608370_+\|glycosyltransferase	gnl\|CDD\|223515	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane].	5.35905e-08
NZ_AP018254.1\|WP_096621740.1\|2594092_2595319_-\|DUF790-family-protein	gnl\|CDD\|368530	pfam05626, DUF790, Protein of unknown function (DUF790). This family consists of several hypothetical archaeal proteins of unknown function.	0
NZ_AP018254.1\|WP_096621756.1\|2611580_2612447_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	1.18549e-114
NZ_AP018254.1\|WP_096621750.1\|2605229_2605493_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	2.00605e-21

>NZ_AP018254.1|WP_096621750.1|2605229_2605493_+|helix-turn-helix-transcriptional-regulator
MAGGESQTPVSLSDRELQIIDLVAAGLTNQEIAARLEISKRTVDNHISNILTKTQTDNRVALVRWALHWGKVCLDDVNCCSLPNPNE
>NZ_AP018254.1|WP_096621748.1|2603712_2604699_-|carbohydrate-kinase
MSNPRVLCLGEVLFDCLADQLGKPLDEVESWTPYPGGAPANVACALVKLGISAGFIGAVGEDAPGNDLVKLLTDVGVEIAGVQRHPTAPTRQVYVVRSLSGDRNFAGFGDYDTAEFADTRLDGSKIPEWLFQAADVLVFGTLELAYPESGQAVRRALELAQKYDLKIILDVNWRPVFWHNQEAAPPIIRELFPYVDFIKLAKEEAEWLFNSTDPGAIKNRLDSVEGVLITDGENGCTYCLDESEGQVPAFKVDVVDTTGAGDSFLAGFTHQLLTRGVKALGNPQIAEQAIIYASAVGALTTLKPGAIASQPTLQEVDAFLQGRVGSWE
>NZ_AP018254.1|WP_096621747.1|2601482_2603423_+|glycine-oxidase-ThiO
MASDFVVVIGGGAIGLAIAIEMKLRGWNVTVVRRNLAAAALGAAAGMLAPDAERVSPGPMRDLCWRSRRLYPVWVSKLEELTGKDCGFWACGILTPVYQPTSEQPVGGYWLDKDTVYTYQAGLGEGLVGAWWYPDDAQVDNRQLSQVLHLAAQSLGVEMQDGVNVEGLITETGKVTGLQTSVGTITADHYILAGGAWSGQLMPLPVRPIKGQMLRVRVPHHIGELPLTRILFGEGIYIVPRKNRQIIIGATSEDVGFHEGNTPQGIQQLLQQATHLFPPLATYPIEEFWWGFRPTTPDELPILGASPWSNLTLATGHHRNGILLAPITAQLIADAITSTPDPLLQHFHYQRSFKQPMSTILSTHTANFPNGQPKQSFTPPAPILDSPLEIAGKKFTSRLMTGTGKYRSIPEMQQSVISSGCEIVTVAVRRVQTNAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIRVARLGREMAKLLGQEDNNFVKLEVIPDPKYLLPDPIGTLQAAEQLVKEGFAVLPYINADPMLAQRLEEVGCATVMPLAAPIGSGQGLKTTANIQIIIENAHIPVVVDAGIGAPSEAAQAMEMGADALLINSAIALAENPVAMAFAMNAATVAGRIAYLAGRMPIKSYASPSSPVSGTVS
>NZ_AP018254.1|WP_096621746.1|2600446_2601127_-|hypothetical-protein
MNFRIFSSIVSILSVAVISLPRNNVSAFPPLQSQNSPNQPQITAQTTVRPNRIIVPGKSVGQITKRTKRADLAKLFPSSRFKDEQVLFFGGEVEMPGTKVTIGKNEIIVLWTNKSRNQAAGVMILDPTWQTPEGVGVGTTLAKLRQLAGREFKMTGFGWDYGGIPQLRNTKLKYDNLTIQMTFSETASQKYPQQVQKVSGDHELLSNNPNLRNLDVRIFRIIAMFE
>NZ_AP018254.1|WP_096621744.1|2599863_2600355_-|YajQ-family-cyclic-di-GMP-binding-protein
MASTYSFDIVSDFDRQELVNAIDQVCRDIKSRYDLKDTNTTVELGETKITVNTDSEFTLQAVHTILREKAAKRNLSQKIFEFGKIESASGNRVRQEITLKKGISQDIAKQISKLIRDEYKKVQASIQSDAVRVSAKSKDDLQAVMQRVKQEDYPVALQFTNYR
>NZ_AP018254.1|WP_096621742.1|2598238_2599234_-|Gfo/Idh/MocA-family-oxidoreductase
MYKSSAFLQTGRLGVGLIGTGYVGKLRAEAFNADTRVNLVGVAGRTPEKVAAFAENYQTQAVSSWQELIEREDVDLVVVCSANHERNAIANAAIDAGKHLVIEYPLALNYNEAEAIIARARANNLFLHVEHIELLGGVHQTIKENLEQVGEVFYVRYNTIKPENPAPRKWTYHHEYFGFPLIGALSRLHRLTDLFGEVFTVNCHQRFWQVEEDYYQGCFCIAQLSFQSGLLGQIIYAKGETLWQAERKFEVHGEKGGLIFHEDGGYLVHTGETIPIAIGDRRGLFAKDTNMVIEHLFNGTPLYITPEQSLYTLKVATAAQRSAETGLTIVV
>NZ_AP018254.1|WP_096621741.1|2595800_2597600_-|ankyrin-repeat-domain-containing-protein
MMKLNYKLSPNLLSKIFLITLTTVGTVVIMPRIVESQTPKKTTNSVSPFCQTLSEKFGPFGNGTPDLYVALERAIAKGGDLNQPCNMFGEKWLPLNFLLSTNEALAQRLIQQGVNVNARDGKGDTPLHYVGASTKTTQLLLNRGAKVNVRNQDGNTPLHNVFGQKNAAVIKLLLDRGAQVNARNKEQMTPLHFAANSGKADITQLLIRSGADINARSNQNWTPLHYGAANPEVAKLLIQAGANLTIQNSQGAVIHSNSLEPAVLKLLLDRGVNVNLRNRQGQTPLHVHRFRPDLVKLLLARKAQVNLRDAQGRTPLFDVNLEVARLLVAANADLNIQDNLGRTPLHQAVLEEQSSFGPELVTLFLSKNARVDIKDKQGKTALDLARQLNKTQIVNLLEQHIAVTKSPGGGTTTTKATTKLQQLLSAKNWKAADQETRRLLSPQKDPFGPNPKTIPLNLIQEIDQAWLKASGGRFGFSVQARIWRQAVAAHPKNNEAAVNAFRDRVGWKIPTPRREQDFISSDWRNESELNYSLQAPVGHLPWAGVADADVRSVAVPPPGHHCGSCTVDAMHLRHGRFYTYLPQLFARVTTALNSSASKK
>NZ_AP018254.1|WP_096621740.1|2594092_2595319_-|DUF790-family-protein
MLPTDLLMYRQNGEQIIPKRLPIDAHHLQLTSELIDCFQNHVGRTQGELERQLIELEGEATDYRIKRGIAYLLKSGFSTFEIVSPLEPQMLREKVFRQAAKSPPGLESRQTTLIQIADQLSQELQQEVLPEQVKQGLYADLAENRILTNFEIPTPEAILHRYNLSQVQGIFYKASQLIINAHRNVPGQYKLLFRYLKLFQLMAYIEGDADHGFTITIDGPTSLFTPSTRYGLAIAKMIPAILHVSKWSLAAKLQIRDVFSGNWKPGRYTLNSADCGLVTHYPPGKPYDSMLEAAFAERWDSLKSEWILEREVDLIPIPGSVMIPDFRLVHPDGRTFLLEIVGYWRPEYLQKKFAQVRRSECDNLILAISERLNLDKVGVKIQDVPARIVWFKDKLSPKSVLSAILEGV
>NZ_AP018254.1|WP_096621738.1|2593337_2593865_-|DUF2518-family-protein
MFTPDDFLKYAQWMGIGTIFLAVITILGFILKWGIRFRLVGTTGFMLVLTAGLFSLSLAPITRTVIPGATRYNLVYDNGSNQAVITVPLTITNSQLDATLRQAASNLYSYGRSGIGGDNQLTIRARVVLHPEPGVSVPLYIGQVKRSLLTREDENMSVEIFTDKLAQLTQASIGS
>NZ_AP018254.1|WP_172892774.1|2592189_2592369_+|hypothetical-protein
MIRLRCGFIFNCTYLLRMVIWVCRSGIHIPLSSDRIYHYDYDIDDIAGKIAVGNLWLSW
>NZ_AP018254.1|WP_172892775.1|2606454_2607120_+|hypothetical-protein
MNTSDASMVNFSLLNPFNLLNPDLAAPSTSVDAEILKHLSFIPGLKELILLRQVHALEHATVWILSEMKTPRRSHRIARHFQVDNELLGGLSTDRGFYLYGDVNISDLRRAVNLALHKLTHGEENLAIHPRCGTNVSVSMLLTAGLAVGMHLLLPRGPMEQLIGLGIATAIAAEITPEVGALVQKYVTTAIPFNLQVENITLSRDIWGKEAHFVRLNWKER
>NZ_AP018254.1|WP_096626075.1|2607365_2608370_+|glycosyltransferase
MRKLYFLLPGTTEKFYCGGLFAELKTLQIAQQICECEVVTYRQREADKLFLDDILAQSEKFDLHQKIFVVSWGFDVNRLINKLHSQNVIYHAHSAGYGFSIPARIPIIAVSRNTMGYWGQMAPHSLIYYLPNQISDGFQNLQQQRDIDVLVHARKSSTYLMNQLIPALQAKCNVMVINGFVDDLAVLFNRAKVYLYDSAEYWLQQGVSEGFGLQPLEAIACGCQIFSSVNGGLSDYLDPGFNCQKIAGYSCEFDVTRILQAVSNPGYQFVPDQLLAEYRRENILNRLQVILTELNLLFDHKQIYPANIPDLTPARVWQLKTRKFWQKFSKKIGI
>NZ_AP018254.1|WP_096621753.1|2609034_2610321_-|MFS-transporter
MQLKPQDSRFHSKISPWTYISTLYFAQGVPNTIINTVSPILYKNLAIDNAQITFWTSLLNFPWVLKMFWAPIIDTRSTKRTWILTMQFAMFACMALIAFSLQLPNFFGISLIVFAIAAFISATCDIATDGYYMLALSEREQAFFVGFRSLFFRIAMLFGSGFLVFLAGSLEKLLQNTQQAWTSVFLFTAILFLILYFYHQFILPKPHTDKVNTAISANKLAFFQVIQSYFQKPQIIPILAFILLYRLGEAMLVKLASLFLLDTTAKGGLGLSTDTVGLVYGTFGVISLIAGGILGGLLISRYGLKKCLLPMALALNLPDLFYVYMAYAKPPLELVYPLVSLEQFGYGLGFTAFTVYLLYICQGEYKTSHYAISTGLMALGLMLPGAVSGAIQTEIGYFWFFVLVCLLTIPGMMTIFFIPMEQEQNQPG
>NZ_AP018254.1|WP_096621754.1|2610615_2611584_+|malate-dehydrogenase
MQIHTPPQTCNFPRVTIVGAGRVGSTLAQRLAEKNLANVVLLDILKGMPQGLALDLLEARGLETHDREITGTNEYADTANSQIVVITAGFPRKPGMNRDDLLRSNAKIVVEAAQKAVEYSPEAIFIVVTNPLDVMTYLAWQATGLPTQRIMGMAGVLDSARFETFIALELGIAPKDVNAMVLGSHGDLMVPLKRYSTVKGIPIGELLDDVTIERLVTRTRNGGAEIVELMQTGGAFFAPASATSVMVESILLNQSRMLPIAAYLQGQYGLNDVFIGVPCYLGCAGIREIVELNLTPEELQALHVSAENVRQNIHRAKEILQQ
>NZ_AP018254.1|WP_096621756.1|2611580_2612447_+|shikimate-dehydrogenase
MITGTTKLLGVIGYPVEHSLSPLMHNAALTKMNLDFVYLPLPIAPENLATAIAGLACIGLQGFNVTIPHKQTIIPMLSEISDLARDVGAVNTVVRRKDGWWGTNTDVAGFISPLQTTHQGDWSDARAIILGYGGAARAVVVGCIQLGIKQIHVVGRNLSKLTDFLHSWQNLPITVNLQVHSWDDLSRILPQGDLLVNTTPVGMYPHIDASPLSAAEMMLLRENTIVYDLIYTPNPTKFLSLAQARGMVAIDGLSMLIQQGVAALKIWLERDDIPVEVMGEVLRQHLFA
>NZ_AP018254.1|WP_096621757.1|2612433_2612658_+|CPBP-family-intramembrane-metalloprotease
MYLLREEGLYRGYATERLASLTGNYWIGSAIALLAFGLAHVPMWGWIPGLTTILSGGLLTLLYLGNICNPAAIA
>NZ_AP018254.1|WP_096621758.1|2613063_2614371_+|HAMP-domain-containing-histidine-kinase
MVSTNFIPHGHCYLWKTGLVSLHVISDSLITLAYFAIPIMLVYIVSKREDIPFDWIFWCFGAFIVLCGITHLAEVWTLWHPNYWVSGWLKACTAAISLSTAGLLFWLIPKLLAIPNVPKLEALNAALAAEIAERKQIEAKLNLQTQQLEHTLSELQRTQAQMIQSEKMSGLGQMVAGVAHEINNPVSFIYSNILAAKEYAEDLMGLLFLYQKTYPLPPAEIIIRMADIDFDFIKDDFMKLLSSMEKGAERISQIVLSLRNFSRLDEAEFKDVDIHEGIDSTLMVIANKLKSLPNNREIQIIKEYGDIPLVECYPNQLNQVFMHILSNAIDAFAEKPEDVKNFSNQVNQIIISTGKIDNNWVAITIIDNANGITEEIQSKIFDPFFTTKQVGKGTGLGLYISYEIITQKHGGRLFCDSTPGQGTKFVIEIPISHQV
>NZ_AP018254.1|WP_096621760.1|2614578_2615235_-|Uma2-family-endonuclease
MAVSPVTIPIRSIHLSPGSHLLIENISWQQYESILEDLGEKRSGCRINYSKSTLEIMSPLPIHERPHRIIGYIVTTILDFQNRDWEDFGSTTFKRVNQAGVEPETCFYISNSIDVRSLQRIDLEIHPPPDLAIETDVTSKTTLEAYAAIKVPELWIFANSQLKIYILAPDGYIESQISPIFPNLDIAQMIPQLVTVAFHQGTRQMLKKLRDFLSNHCA
>NZ_AP018254.1|WP_096621762.1|2615332_2615566_-|hypothetical-protein
MNYPIPDNPQDISNLRGKPINEELVAAAIAGVIRIVRSQGQSLEELTAQLLAEDPMLDKQQRRWLSQIVAQAWNSFA
>NZ_AP018254.1|WP_096621763.1|2615726_2617811_+|flavin-dependent-dehydrogenase
MRELLYLEIPTPDTDTVCTWLQTDLVVESGEKMLTTDGIRLRWGTTKPSTTISETCGNELSIFIWSVQRTTYLKVFRWGEKAIPGEKGILEQLERQIRQRFPYRYPEPPQIDLTQESIFTALAADYPLTVKYFQRIPNGEYDLTRAYWWEQRWRQGVRNPQQPKQVVFNHAYTSVDTEVEYDLIYVGGALGVIHAAVMARLGYKVLLIERLPFGRMNREWNISRDEVQTLIDIGLVTPGEMESVIAREYKDGFNKFFDANNPPHLKAPILHTPTVLNVALDSEKWLQLCGEKLIAAGGEICGETEFLQADIYTNQVTVTVKNLQDNNQYQVRGRVLVDAMGTASAIAWQLNGKRAFDSVCPTVGAVIESGFPPGVWDSDYGDVLYSHGDISRGRQLIWELFPGANQELTIYLFHYHQVHPDNPGSLLEMYEDFFAILPEYKRCDMEKLVWKKATFGYIPGHFSTSGRDRTVAFDRLVAIGDAASLQSPLVFTGFGSLVRNLERLTTLLDTALKHDLVQGKHLNRIRAFQNNIAVTWMFSKGMMVPTGKHLPPQRINSMLNNFFGLLADSPPPIAENFIKDRFDWLTFNRLALQAAQKNPALLLWIWQLAGTKDMVRWLGNYFNFTRHAIISAFFGNWYPELLTKIQPWLEPRFPGIWLQLLAIKYATRIGRPPKNPVVSNYPVAVVTGEGKVMN

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Crispr_ID: NZ_AP018254_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_30

2673869-2674008

Orphan

Consensus_repeat	Method
ATGTAATGCTGATATCTTTGCTGATAAAAGTGATTTTCCGATTCACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_30

>merge|NZ_AP018254|30|2673869-2674008|CRISPRCasFinder
ATGTAATGCTGATATCTTTGCTGATAAAAGTGATTTTCCGATTCACTTTTTGGGGTCAGGGAGTAAGGGAATCGGGAGTTGGGAGTAGCCTACATGTAATGCTGATATCTTTGCTGATAACAGTGATTTTCCGATTCACT

>NZ_AP018254|30|29|2673869-2674008|CRISPRCasFinder
ATGTAATGCTGATATCTTTGCTGATAAAAGTGATTTTCCGATTCACT	TTTTGGGGTCAGGGAGTAAGGGAATCGGGAGTTGGGAGTAGCCTAC
ATGTAATGCTGATATCTTTGCTGATAACAGTGATTTTCCGATTCACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096621822.1\|2670426_2672016_-\|glycoside-hydrolase-family-57-protein	unknown	unknown	gnl\|CDD\|224460
NZ_AP018254.1\|WP_096621838.1\|2682580_2683147_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_AP018254.1\|WP_096621832.1\|2676992_2677748_-\|phycobilisome-rod-core-linker-polypeptide	unknown	unknown	gnl\|CDD\|366093
NZ_AP018254.1\|WP_096621818.1\|2666083_2667901_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_AP018254.1\|WP_096621826.1\|2673310_2673808_+\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl\|CDD\|238451
NZ_AP018254.1\|WP_096621813.1\|2659769_2661890_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|237862
NZ_AP018254.1\|WP_096621837.1\|2681252_2682575_-\|four-carbon-acid-sugar-kinase-family-protein	unknown	unknown	gnl\|CDD\|225930
NZ_AP018254.1\|WP_096621820.1\|2668568_2669999_+\|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
NZ_AP018254.1\|WP_096621835.1\|2679290_2680559_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_AP018254.1\|WP_096621840.1\|2683836_2684859_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_AP018254.1\|WP_096621823.1\|2672633_2672969_+\|photosystem-II-reaction-center-protein-Psb28	unknown	unknown	gnl\|CDD\|237446
NZ_AP018254.1\|WP_096621814.1\|2662133_2663030_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|178283
NZ_AP018254.1\|WP_096621811.1\|2657977_2659381_+\|amidase	unknown	unknown	gnl\|CDD\|223232
NZ_AP018254.1\|WP_096621829.1\|2675335_2675572_-\|DUF3134-domain-containing-protein	unknown	unknown	gnl\|CDD\|371474
NZ_AP018254.1\|WP_096621828.1\|2674144_2675248_-\|phospho-N-acetylmuramoyl-pentapeptide--transferase	unknown	unknown	gnl\|CDD\|234638
NZ_AP018254.1\|WP_096621841.1\|2685318_2685972_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_AP018254.1\|WP_096621831.1\|2675815_2676400_+\|fibrillin	unknown	unknown	gnl\|CDD\|309752
NZ_AP018254.1\|WP_096621815.1\|2663242_2664412_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_AP018254.1\|WP_096621834.1\|2677805_2678675_-\|phycobilisome-linker-polypeptide	unknown	unknown	gnl\|CDD\|366093
NZ_AP018254.1\|WP_096621817.1\|2665340_2665937_-\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|223340

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096621822.1\|2670426_2672016_-\|glycoside-hydrolase-family-57-protein	gnl\|CDD\|224460	COG1543, COG1543, Uncharacterized conserved protein [Function unknown].	0
NZ_AP018254.1\|WP_096621838.1\|2682580_2683147_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	6.08176e-112
NZ_AP018254.1\|WP_096621832.1\|2676992_2677748_-\|phycobilisome-rod-core-linker-polypeptide	gnl\|CDD\|366093	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide.	1.78636e-79
NZ_AP018254.1\|WP_096621818.1\|2666083_2667901_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.35299e-140
NZ_AP018254.1\|WP_096621826.1\|2673310_2673808_+\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	1.59896e-66
NZ_AP018254.1\|WP_096621813.1\|2659769_2661890_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|237862	PRK14948, PRK14948, DNA polymerase III subunit gamma/tau.	0
NZ_AP018254.1\|WP_096621837.1\|2681252_2682575_-\|four-carbon-acid-sugar-kinase-family-protein	gnl\|CDD\|225930	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown].	3.45112e-106
NZ_AP018254.1\|WP_096621820.1\|2668568_2669999_+\|NADP-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_AP018254.1\|WP_096621835.1\|2679290_2680559_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.63067e-68
NZ_AP018254.1\|WP_096621840.1\|2683836_2684859_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	2.73638e-111
NZ_AP018254.1\|WP_096621823.1\|2672633_2672969_+\|photosystem-II-reaction-center-protein-Psb28	gnl\|CDD\|237446	PRK13612, PRK13612, photosystem II reaction center protein Psb28; Provisional.	5.36844e-67
NZ_AP018254.1\|WP_096621814.1\|2662133_2663030_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|178283	PLN02679, PLN02679, hydrolase, alpha/beta fold family protein.	4.74325e-80
NZ_AP018254.1\|WP_096621811.1\|2657977_2659381_+\|amidase	gnl\|CDD\|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	2.41576e-142
NZ_AP018254.1\|WP_096621829.1\|2675335_2675572_-\|DUF3134-domain-containing-protein	gnl\|CDD\|371474	pfam11332, DUF3134, Protein of unknown function (DUF3134). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	2.40479e-24
NZ_AP018254.1\|WP_096621828.1\|2674144_2675248_-\|phospho-N-acetylmuramoyl-pentapeptide--transferase	gnl\|CDD\|234638	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional.	2.46534e-131
NZ_AP018254.1\|WP_096621841.1\|2685318_2685972_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	4.11594e-119
NZ_AP018254.1\|WP_096621831.1\|2675815_2676400_+\|fibrillin	gnl\|CDD\|309752	pfam04755, PAP_fibrillin, PAP_fibrillin. This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins.	4.16111e-62
NZ_AP018254.1\|WP_096621815.1\|2663242_2664412_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_AP018254.1\|WP_096621834.1\|2677805_2678675_-\|phycobilisome-linker-polypeptide	gnl\|CDD\|366093	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide.	1.76404e-75
NZ_AP018254.1\|WP_096621817.1\|2665340_2665937_-\|dihydrofolate-reductase	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	4.56129e-24

>NZ_AP018254.1|WP_096621826.1|2673310_2673808_+|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein
MTQQPHPDTSNYMVTCAVLTTSDTRTTETDTSGQLIQDLLNAAQHRINYYQVIPDEPTLIQSELSTLGQRDDIEAIILNGGTGIAKRDTTYDVVEKLLTKTLPGFGEIFRYLSYQEIGSRAIASRAVAGVYHNKLIFSLPGSRNAVRLGMEKLILPEIIHLVKQL
>NZ_AP018254.1|WP_096621823.1|2672633_2672969_+|photosystem-II-reaction-center-protein-Psb28
MASIQFSPGVDEEVIPEVKLTRSRTGNSGTATFIFQNPKVLSEGNNQEILGMFMIDEEGEISTREVKGKFVNGRPEALEAVYVMKSEEEWNRFMRFMERYAEENGLGFDKS
>NZ_AP018254.1|WP_096621822.1|2670426_2672016_-|glycoside-hydrolase-family-57-protein
MAIGYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLLRVFEGLISDNIDFKITMSMTPPLVSMLRDPLLQERYEEHLTKLEELIALEIEHNSNNGHIKYLAEFYASEFKAIRSVWERYQGDLVTAFKRFQDSNNLEIITCGATHGYLPLMKMYPQAVWSQLKVAYEHYEETFGIPPRGIWLPECAYYEGLERMLADVGLRYFLVDGHGILYARPRPRFGTYAPIYTETGVAAFGRDHESSQQVWSSEVGYPGSPEYREFYKDLGWEAEYEYIKPFIMPNGQRKNTGIKYHKITGRGLGLGDKQLYDPYWAREKAAEHAGNFMYNRTQQVAHLHGIMQRPPIVVSPYDAELFGHWWYEGPWFIDYLFRKSWYDQQTYQMTHLADYLRANPTQQVCRPSQSSWGYKGFHEYWLNDTNAWIYPHLHKAAERMIEISKLEPADELEWRALNQAARELLLAQSSDWAFIMRTGTMVPYAVRRTRSHLMRFNKLYEDIKIGKIDSGWLEKVEYMDNIFPNINYRCYRPL
>NZ_AP018254.1|WP_096621820.1|2668568_2669999_+|NADP-dependent-phosphogluconate-dehydrogenase
MTQLQSFGVIGLAVMGENIALNVERNGFPIAVYNRSREKTDAFMANRATGRNVKAAFELKDFVAALERPRRILVMVQAGKPVDAVIQQLKPLLDEGDIIIDGGNSWFEDTERRTQELEPTGLRYIGMGVSGGEEGALNGPSLMPGGTESSYQFLSPIFNKIAAQVDDGPCVTYIGPGGSGHYVKMVHNGIEYGDMQLIAEAYDLLKNAAGLDHNQLHQVFSEWNTTDELNSFLIEITANIFPYIDPETKQPLVELIVDAAGQKGTGRWTVQTALELGVAVPTIIAAVNSRIISSIRDERIAASKQLTGPSGKVSGDINAFIGKVRDALYCSKICSYAQGMALLNTASQTYNWNLTLSELARIWKGGCIIRAGFLNKIKNAFNENPTLPNLLLAPEFKQTILDRQNAWREVIMTAAQLGIPVPAFSASLDYFDSYRRERLPQNLTQAQRDYFGAHTYKRIDKEGTFHTEWVPITEAK
>NZ_AP018254.1|WP_096621818.1|2666083_2667901_-|ABC-transporter-ATP-binding-protein
MANLKDLVSYFRPYWRLSIFSIAASCVYELLDLIVPYGIGQILNVITNQPLDKPLAGLMGLIANGFGVEVNLSLMISVLLGLIFLVTVVRAPTQPWLTVWFHWDIALKARRDKNRESIAKILTLPLEYYDENNPGRIAGRVARGLSNHTWTYPEIAGQMIPKLFRVLGIFAFIVFVDWRIAVLYLLSFVVILGLTLVKLRKLIWHEERLDKYMEDTESRTSEIISNIKTVKAFATENKEFQRQANRLERELKVVEHRIHQGYTKLSTLQRSLVQFCVFVVFGMTLAATINGSISIGHFIMTYTLASMAFAELEPIATLAEIFARRYSSMVRFHEFLHQPGGIDAGELFAGENTLTNPYKFTGKVEFEGVSFGYEANRPVLEDINLLIEPYQTVALVGRSGSGKSTLVKLLLRYFEPSQGRILIDGEDIRSLDVGNYRRRLAIVHQEVDVFNGTLLDNLKYGRPDATMAQVETACRMARLDEVIQMLPQGYYTVVGERGVRLSGGQRQRLGIARSLLVEPDVLIFDEATSSLDYESERSIQLAMRELQGTRTTIIIAHRLSTVREADKIVVLDRGKILEVGSHEELLSHGGIYHRLHALQESGDLG
>NZ_AP018254.1|WP_096621817.1|2665340_2665937_-|dihydrofolate-reductase
MYAELTYYVACSVDGFIAHTDGSHDGFSQDGEYFADLFASFPETVPSHLRGVMGINSENKWFDTVFMGRKTYEIGLKEGVTSPYSHMKQYVFSRTLRKSPDENVQLVSENAVELVTALKNQNGKGIWLCGGASLATTLFKNSLVDQLILKINPFLMGSGIPLFSGVIRQSTLELTDSKIYGNGVVMLYYKVSAINDQV
>NZ_AP018254.1|WP_096621815.1|2663242_2664412_+|pyridoxal-phosphate-dependent-aminotransferase
MKLAARVSQVTPSMTLAIAAKAKAMKGEGIDVCSFSTGEPDFDTPHHIKVAAIKALEDGKTKYGPAAGEPALREAIAAKLQRENNLDYRPEQVIVTNGGKQSLYNLMVALIEPGDEVIIPAPYWLSYPEMVTLAGGKSVIIEATVENGYKITPEQLQQAITPKTKLFILNSPSNPTGMVYTPEEIKALAQVIVKADIFVVADEIYEKILYDGATHLSIGSLGKEILERTIVSNGFAKGYAMTGWRIGYLAGPVELIKATITIQSHSTSNVCTFAQYGAIAALTGSQDCVETMRQAFAKRREVMYARLNAIPGLTCPRPDGAFYLFPDIGQTGLKSLDFCNALLEEQQVAVIPGIAFGADNNIRLSYATDMETIEKGMDRLEKFVKSKLG
>NZ_AP018254.1|WP_096621814.1|2662133_2663030_-|alpha/beta-fold-hydrolase
MVTPAISLSASIETQTWTWQNYKIQYTVQGQGQPLVLIHGFGASIGHWRKNIPALATSGYRVFALDLLGFGGSDKAAIAYSIDIWVELIKDFWQEHIQQPSVFIGNSIGALIALTIASRHREITQGAVLINSAGGLSHRPHELNPVLRFVMASFSRLVSHPLTGTIVFNSIRRKSQIRRTLYQVYRRREAVTEELVEMLYAPSCEPGAQQVFAAILTAPPGDSPEELLPTVTVPLLVIWGADDPWTPITGAKIYEQARAEGKDIEIIPIENAGHCPHDEVPEVVNAEIINWLQVKVRV
>NZ_AP018254.1|WP_096621813.1|2659769_2661890_+|DNA-polymerase-III-subunit-gamma/tau
MSYEPLHHKYRPKTFAELVGQEAIATTLTNAIRSAKIATAYLFTGPRGTGKTSSARILAKSLNCLSSPVPTAEPCGVCDACQGISKGYAVDVIEIDAASNTGVDNIREIIERAQFAPVQCRYKVYVIDECHMLSTAAFNALLKTLEEPPKHVVFVLATTDPQRVLPTIISRCQRFDYRRIPLEAMIAHLRQIAINENIPIREDAIRLVAQLSQGGLRDAESLLDQLSLLSGEIVPESVWNLVGTVSERDLLNLVDAIATDNPQVTIESVRAILDRGREPLIILQSLAGFYRDLLIAKTAPNRPDLAACTEETWSAMVNYGQNFQVSDLLHGQQHLRSAEVQLKNSTQPRLWLEVTLLGLLPSATVTNTTVVTNPSPPVSKASFSPPPIEQAPTPPPPPAVHPPQSSPTPPPPVPTSPPTVEPTPQTITPPVQPVEQPVMEESVAPVYDYGQIWQQVLMQIVPISRRELLRQMCQVVYMDDSSARVAIKSAWYKRVQEDLPVITSAFSAVLNRHIHVSLESANNFHSTNHLATENRSQSYQSLPKNISSPQSSTTTVKLPTHSFVNHPQVQKHSPQTHQVQNHSSPTHPTPNPQVPNYPNQPVQTNNYQSPRPTEPGVSPPTQTPIPSKIEAGNKQPHNPPVEIQETPKNPVISSPVSSVEVEAILNAAKKLAEFFDGKIVTDQDGSDFGAIDGGMEFSEELDGGDD
>NZ_AP018254.1|WP_096621811.1|2657977_2659381_+|amidase
MDVVDLAFTPALQQAELIRCKQVSPLELTEVYLERIERLNPQLGSYFTVTGELALEDAKAKTEMLVTSTDLPAFFGVPISIKDLNPVKGVRCTFGTVAALNYIPDYEDIIVTKIRQAGFTLLGKTATSELGSFPYTETIPFPPTRNPWNLEYTPGGSSGGAASAVAAGLCAIAQGSDGGGSIRGPVACCGLVGIKPSRGRVSHAPAGDRVSGIAINGPIARTVADAAALLDVMSGYVTGDPYWLPDPQVSFLAASQQESAKLRIGFATEILPMGSADTTCREAVLKTVQHLQDLGHDLEATSLDFSDLIEPFKTVWSTGVAASGFPLEALQPLNRWLLSKQISGGEYLQAVLNMQIASRKIVAYFDNFDVLVLPVYLHRPIRVGEWSHLSPEDTFDHIAHWVAPCPPFNATGQPVIALPVGFDAQGLPMSVQLIGKPADELTLIRLAAQLEKVNPWIQHRPPLAISE
>NZ_AP018254.1|WP_096621828.1|2674144_2675248_-|phospho-N-acetylmuramoyl-pentapeptide--transferase
MDAKLSPDQGLNITGIGLVSCLGVGLGIAGLILDGMANRMPWQADSLTLPFLLCALISGTVGYWVVPWLQALKAGQVIREDGPQAHLKKAGTPTMGGIFFIPVALFVACVWSNFAVDVLAVSALTLSYGFIGWIDDWQILRRKSNKGISPPMKLGLQVGFAALFCLWLLATKDFSNITSISLPFGLSLSLGVLFFPLAGFVLVAESNATNLTDGIDGLAGGTVAIAMLALGALVAPESTGLMIFCASVSGSCLGFLAHNRNPARVFMGDTGSLALGGALAAVALLTNSLAALFILSGIFFIETLSVMAQVSYYKATKGPDGKGKRLFKMAPLHHHLELSGWSELQVVAVFYAVGAILAIAGYFLGKI
>NZ_AP018254.1|WP_096621829.1|2675335_2675572_-|DUF3134-domain-containing-protein
MVNSHSPLREEPRTQRAPVIPLKQELSLLDWLRQTGRLIARSEQEPDFTEDEEEISEFLGGDDVGGYDDDDDDISLDD
>NZ_AP018254.1|WP_096621831.1|2675815_2676400_+|fibrillin
MLAKNQLLAAIAPVNRGLKATELEKQAILAAIATLEDLNPNPHPLEALDLLDGDWRLIYTTSRELLNLERLPFSHLGQIYQCIRTKSNSVYNIAEIFGLPYLDGIVTACARFSPISHRRVEVRFQRSVIGLSRLIGYKSPSQLITDIENGKKFTALDFTISANNNPGWLDITYLDPDLRIGRGNRENVFVLTRA
>NZ_AP018254.1|WP_096621832.1|2676992_2677748_-|phycobilisome-rod-core-linker-polypeptide
MGSIVINATAPTELRSTSSLEEVEAVIRAAYKQVLGNAHLMESERLTTAESQLRDRRITVRDFVRAIAKSDLYRERFFESSSPYRFVELNFKHLLGRAPADQAEISEHIRRYAESGYDAEIDSYLDSVEYNNAFGENIVPYYRGASTQVGQKQVAYNHMFDLVRGFAETSKAAKDSRLVSAIATNSPSKIKSTSGVPATEKRFKILVAGAKFDAPRHRSNTEYIVSASKMTPQIQRIHRTGGKIVSITEIV
>NZ_AP018254.1|WP_096621834.1|2677805_2678675_-|phycobilisome-linker-polypeptide
MAFGPASRLGVAAFEDTPPIELWTGCSAEDVETVIRAVYKQVLGNAYVMESERLAIPESQLKGGEISVREFVRQVAKSELYRSRFFDSCSRYRAIELNFKHLLGRAPDSYEEMKAHSAILDAGGFTAEIDSYLDSDEYQSAYGENTVPYYRGYKTQNGQSMVEFTHMFQLLRGASSSDLKGNLAGNRPRLNALVIQNTPTPVVPPSGASEGWSFQNPAFGSRSRHGAGATEDGKSYRIEVTGYRANAVNRISKFRRANQVFIVPYNKLSEEYQRIHKMGGVIASITPVN
>NZ_AP018254.1|WP_096621835.1|2679290_2680559_-|FAD-binding-oxidoreductase
MVNQTLESIVGQTGVTPWENLAASYQQRIQLATQKIPGCIVYPETPEQLAEIIQAASLAKWRLLVCGNASKLDWGNIADRIDIVISTQRLNQVIEHAVGDFTVTLQAGVKFSDLQTLLQPTGQFFAVDPLYPEMATIGGIIATGDTGSMRQRYGSVREQILGISFVRADGKIAKAGGRVVKNVAGYDLMKLFTGSYGSLGVITQVTLRLYPIQEASKTVVLVGETDAIAQAASKIRNSALTPTQFDLLSQGLVTKLGLGQGLGIMVRFQSIWESVQEQTQKIIHIADSFNLHRQTYEGEEETKLWMRSPQEIYTPLTGEAIMAKIGILPSYAIELLTNIEIGRIHLGSGIGNIQCHNINQVKQIRTLTQSHQGYLTVQIAPPSVKSELDVWGYSGNARGLMQSIKSQFDPNNLLNPGRFVVG
>NZ_AP018254.1|WP_096621837.1|2681252_2682575_-|four-carbon-acid-sugar-kinase-family-protein
MTAQPKIIVLDDDPTGSQTVHSCLLLMDWDVETLRMGLRDRAPIFFVLTNTRALTPENAASRTREICQNLKAALKAENISDFLVVSRSDSTLRGHYPIETDAIAWELGGFDAHFLVPAFFEGGRFTKDSIHYLLVNGVPTPVHETEFARDSVFGYKYSYLPKYVEEKTQGRILAEEVTRLLLADIRAGCLEKLLELHDNQCVVVDGETQADLNRFAEDILTAASHGKRFLFRSAASILTALAALPPQPVPAEKMSQYVRNGQPGAVIVGSHVKKTTQQLTRLLQADGVAGVEVEVGKLLEGDGGVEESILEDVLKTVQTIHQQGKTPVVYTSRQELTFADSKTRLDFGIRVSSLLMDIVRGLPRDIGFLISKGGITSNDVLSDGLALTSARLLGQILAGVSMVTTSSDHPLFPNLPVVLFPGNVGDENALFTVYQRLAPI
>NZ_AP018254.1|WP_096621838.1|2682580_2683147_-|recombination-protein-RecR
MEQLQRLPGVGPKTAQRLALHIIKRPEAEIEALAKALVEAKKQVGLCQVCFHLSSEPVCEICRNPNRDNGVICVVVDSRDVIALEKTREYKGKYHVLGGVISPIDGIGPEQLTIQALVRRVSQQQPREVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGLPVGGDLEYADEVTLARALEGRRELE
>NZ_AP018254.1|WP_096621840.1|2683836_2684859_+|GTP-binding-protein
MTTSNENEYIIPDIPKRGMPVTIITGFLGSGKTTLLNQILQNKQDLKVAVLVNEFGDINIDSQLLVSTDEDMVELSNGCICCTINEGLVDAVYRVLERDERVDCMVIETTGVADPLPIILTFLGTELRDLTNIDSILTLVDAEAFGPDHFHSEAALKQITYADIILLNKTDLVNRDKIDEIEDFIHDVKLNPKILHTQYGKVALPLILGVGLTPEDLYTYLQNSEEDHHHHHDENEHHHHHHSHHLENDGFVSCSFQFNRPFDVHKFEHFLTEEMPTDVFRAKGILWFSESELRHIFQLSGPRYQLDADEWKTQPKNEVVFIGRNLDKNKIHTLLSNCLL
>NZ_AP018254.1|WP_096621841.1|2685318_2685972_+|GTP-cyclohydrolase-I-FolE
MTFSISPEQTTADELISSLSLQQKPQVTEAEMMQAVRTLLIGLGEDPDREGLKDTPKRVMKALQSLTKGYHESLDELLNGAVFTEDANEMVLVRDIDIFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKPQGVAVVVEATHMCMVMRGVQKPGSWTVTSAMRGVFAEDARTREEFMNLIRHSPRFHG

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Crispr_ID: NZ_AP018254_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_31

2696878-2697035

Orphan

Consensus_repeat	Method
CTTGCCGCAGGCTATTACGTAG	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP018254_31

>merge|NZ_AP018254|31|2696878-2697035|PILER-CR
CTTCCCGCAGGCTATTACGTAGCTTACTTTCCACCACACGGGTATTAAAAACTACGTAGACCCATAGCGACTTGCCGCAGGCTATTACAAATTACGTAGCTTGTTTCCCGCGTAGCGGGTATTACGTACGCGAAGCGTTGCCGCAGGCTATTACGTAG

>NZ_AP018254|31|8|2696878-2697035|PILER-CR
CTTCCCGCAGGCTATTACGTAG	CTTACTTTCCACCACACGGGTATTAAAAACTACGTAGACCCATAGCGA
CTTGCCGCAGGCTATTACAAAT	TACGTAGCTTGTTTCCCGCGTAGCGGGTATTACGTACGCGAAGCGTTG
CCGCAGGCTATTACGTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780713.1\|2714194_2715652_+\|precorrin-3B-synthase	unknown	unknown	gnl\|CDD\|236573
NZ_AP018254.1\|WP_096621855.1\|2700714_2702112_+\|AtzE-family-amidohydrolase	unknown	unknown	gnl\|CDD\|236409
NZ_AP018254.1\|WP_096621840.1\|2683836_2684859_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_AP018254.1\|WP_096621868.1\|2715882_2716512_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|181352
NZ_AP018254.1\|WP_157780711.1\|2692869_2693052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621860.1\|2706055_2707261_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223541
NZ_AP018254.1\|WP_096621844.1\|2687319_2689740_+\|sucrose-synthase	unknown	unknown	gnl\|CDD\|274149
NZ_AP018254.1\|WP_096621843.1\|2686072_2687146_-\|family-10-glycosylhydrolase	unknown	unknown	gnl\|CDD\|224563
NZ_AP018254.1\|WP_096621852.1\|2697079_2697763_-\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225218
NZ_AP018254.1\|WP_096621853.1\|2698197_2699607_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236669
NZ_AP018254.1\|WP_096621838.1\|2682580_2683147_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_AP018254.1\|WP_096621850.1\|2694975_2696739_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|223929
NZ_AP018254.1\|WP_096621865.1\|2712473_2713490_-\|CDF-family-Co(II)/Ni(II)-efflux-transporter-DmeF	unknown	unknown	gnl\|CDD\|224151
NZ_AP018254.1\|WP_096621847.1\|2691382_2692294_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_AP018254.1\|WP_096621849.1\|2693247_2694885_-\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
NZ_AP018254.1\|WP_157780712.1\|2705012_2705345_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096621863.1\|2707902_2710164_-\|transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223815
NZ_AP018254.1\|WP_096621846.1\|2690293_2690851_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096621857.1\|2702205_2703525_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_AP018254.1\|WP_096621841.1\|2685318_2685972_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_157780713.1\|2714194_2715652_+\|precorrin-3B-synthase	gnl\|CDD\|236573	PRK09567, nirA, NirA family protein.	1.37529e-100
NZ_AP018254.1\|WP_096621855.1\|2700714_2702112_+\|AtzE-family-amidohydrolase	gnl\|CDD\|236409	PRK09201, PRK09201, AtzE family amidohydrolase.	0
NZ_AP018254.1\|WP_096621840.1\|2683836_2684859_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	2.73638e-111
NZ_AP018254.1\|WP_096621868.1\|2715882_2716512_+\|precorrin-8X-methylmutase	gnl\|CDD\|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	1.58508e-133
NZ_AP018254.1\|WP_096621860.1\|2706055_2707261_+\|AAA-family-ATPase	gnl\|CDD\|223541	COG0465, HflB, ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones].	7.12245e-34
NZ_AP018254.1\|WP_096621844.1\|2687319_2689740_+\|sucrose-synthase	gnl\|CDD\|274149	TIGR02470, Sucrose_synthase_1, sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_AP018254.1\|WP_096621843.1\|2686072_2687146_-\|family-10-glycosylhydrolase	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	2.60248e-68
NZ_AP018254.1\|WP_096621852.1\|2697079_2697763_-\|CAP-domain-containing-protein	gnl\|CDD\|225218	COG2340, COG2340, Uncharacterized protein with SCP/PR1 domains [Function unknown].	3.26837e-30
NZ_AP018254.1\|WP_096621853.1\|2698197_2699607_-\|hypothetical-protein	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0.000267615
NZ_AP018254.1\|WP_096621838.1\|2682580_2683147_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	6.08176e-112
NZ_AP018254.1\|WP_096621850.1\|2694975_2696739_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|223929	COG0860, AmiC, N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane].	1.33029e-59
NZ_AP018254.1\|WP_096621865.1\|2712473_2713490_-\|CDF-family-Co(II)/Ni(II)-efflux-transporter-DmeF	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	7.24029e-64
NZ_AP018254.1\|WP_096621847.1\|2691382_2692294_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.83131e-74
NZ_AP018254.1\|WP_096621849.1\|2693247_2694885_-\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_AP018254.1\|WP_096621863.1\|2707902_2710164_-\|transglycosylase-domain-containing-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	0
NZ_AP018254.1\|WP_096621846.1\|2690293_2690851_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.89328e-27
NZ_AP018254.1\|WP_096621857.1\|2702205_2703525_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.69584e-37
NZ_AP018254.1\|WP_096621841.1\|2685318_2685972_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	4.11594e-119

>NZ_AP018254.1|WP_096621850.1|2694975_2696739_+|N-acetylmuramoyl-L-alanine-amidase
MRIAFGLVFISSIITPSIVLAQQQPLKVVYPPANHQTSADRIFFIGSAPPTGKVFINGQPINRSPSGNFAPSLPLQLGENRFVVRYEDQELTIQVTRTATQPEIPQGLAFGKDSLVPKVDIARMTGEPICFSAIAPPNAKVSVKLADQTINLVPQPKQSLLPSNLAALTGRNQPEAQATAGFYAGCTSFNSIGDLGQPQYQLTLYGKTLTQAAGGKVQILSPHQLQVAEITVAAGVARTGPSTDYSRLTPLPQGTQAAITGKEGIWYRLDYGGWINSQETRIIPVTVPPRTIIRSVGYRQGANTTELRFPLQIPVPVSIQQGSNTLNLTLHNTTAQTDIIRTDDDPIIERVDWQQITPQTVQYQINLKTKQQWGYQFQYEGTTLVLSLRHPPRLTKNRRRPLEGVKILLDPGHGGRELGAVGPTGVPEKEVNLIVSQLLRDELTKRGANVVMTRTDDRELSLPERQAIINRELPTIALSVHYNSLPDNGDAENTQGVGMFWYHSQAHHLSVFLHNYLVKKLNRPSYGVFWNNLALTRPHSAPSVLLELGFMSNPREFEWITDPKSQAKLAQTLAEGITEWLKMHSAK
>NZ_AP018254.1|WP_096621849.1|2693247_2694885_-|CTP-synthase
MTKFVFVTGGVVSSIGKGIVAASLGRLLKSRDYSVSILKLDPYINVDPGTMSPFQHGEVFVTQDGAETDLDLGHYERFTDTPMSRLNSVTTGSVYQAVINRERRGDYEGGTVQVIPHITNEIKERIIRVAKDTNPDVVITEIGGTVGDIESLPFMEAIRQFRKEVGRQNVLYMHVTLVPWITSAGEMKTKPTQHSVKELRSIGIQPDILVCRCDRPLPPGIKEKLSEFCDVPFECVIPAPDANSIYEVPLILEREGLAQQALELLQMEQRIPNLLQWRELVERLYSPKYPIEIAIVGKYVRLNDAYISVVEALRHAALATYGDLRLRWVNSEKLETEPVENYLAGVDGIVVPGGFGTRGIDGKIAAIQYAREQQIPFLGLCLGMQCSVIEWARNVAGLKNANSAEFDPNSPNPVIHLLPEQEDVVDLGGTMRLGLYPCNLLPNSLAHRLYQQDLISERHRHRYEFNNGYRNLFLDSGYLISGTSLDGRLVEIIELPKHPFFLACQFHPEFQSRPNVPHPLFKGFLQAAISKCHPGVNQPTPAEVL
>NZ_AP018254.1|WP_157780711.1|2692869_2693052_-|hypothetical-protein
MLHSDSHPQPFIWFRMRGDLCIGYFVSCILSPSCNQYQDWGKDSQKFITRNMLRSPLNLR
>NZ_AP018254.1|WP_096621847.1|2691382_2692294_+|ROK-family-protein
MSREVIGIDLGGTGIKLGRVGTDGNLIKTISVPTPQPANPEDVFATIVEAIAFLDPDGISTAIGVGLPGPTDARGRIAKVSINLPGWVDIPLADWLEAKFHKPTIIANDANCAGLGEAWLGAGRNFPNFILLTLGTGVGGAIIFNGELFSGHYGAAGELGLITLYPDGPTCNSGNNGSLEQFVSIRAIRRRTGLEPAELGVLAANGDSRALEFWQEYGRDLGIGISSLVYVLTPDAVILGGGVSGSAKFFLPATRAEVERRVLFTSRENLQIIPAQLGNQAGIFGAAKIAFEVIGMGEKGKLV
>NZ_AP018254.1|WP_096621846.1|2690293_2690851_+|Uma2-family-endonuclease
MTITESPPLNLEKFLDLPETKPASEYFNGKIQQKPMPQGEHSLIQTTFCEVINGVAKSQKIAIAFPELRCTFDGQSLVPDVSVFRWSRIPRESTGRVSNRFEIPPDWIIEILSPNQNTTKVLTRIFHCLKNGTELGWLIDSENDSIFGVFPGQRLELYTGNSCLPVLEGIEVELTVEQVFGWLSL
>NZ_AP018254.1|WP_096621844.1|2687319_2689740_+|sucrose-synthase
MSELLQAVLDSDEKKDLRILMSVLRQSEKKYLLRNDILNLYGDYCQANQISPACLQSSNLGKLIYYTQEIIQDDTSFCFIIRPQIASQEICRLNDDLSWDEMSVEELLDLRDRLVNRYHPADGDLFEIDFGPFYDYSPIIRDPKNIGKGVQFLNRYLSSKLFADPKQWLESLLNFLRVHSYAGNQLLINPRIQSQQELSTQVKKAIAFLSNYPDDKPYESFQYELQSMGFEPGWGNTTARVRETLEMLDELLDSPAPQTLEAFISRIPMIFKIVLVSAHGWFGQEGVLGRPDTGGQVVYVLDQAKNLDKQLKEDAILAGLEGLNIETKVIILTRLIPNSDGTRCNQRLEKVHGSDNAWILRVLLREFNPNMTQNWISRFEFWPYLETFALDAERELWTELHGRPDLIVGNYSDGNLVAFLLARRMKVTQCNIAHALEKSKYLFSNLYWQDLEDKYHFSLQFTADLLTMNAANFIISSTYQEIVGTNDSVGQYESYKCFTMPDLYHVVNGIELFSPKFNVVPPGVNEGYYFPYTRQEERVKNDCDRITEMLFTLDDPSHIFGHLDNPQKIPLFSMARLDRIKNLTGLAEIFGKSTELQEHCNLILVAGKLRVEESGDGEEREEIVKLYRIIEEYQLQGKIRWLGVRLSKADSGEIYRVIADHRGIFVQPALFEAFGLTILEAMISGLPTFATQFGGPLEIIQDGKNGFYINPTNHEETANKIVKFIQECQTNPDKWLEISANAIERVYSTYTWKIHTTKLLSLSRIYGFWNFISRENREDLLRYIESLFYLIYKPRAQQLLEQHKYR
>NZ_AP018254.1|WP_096621843.1|2686072_2687146_-|family-10-glycosylhydrolase
MSQTELRGVWLTTTDSTVFQSPDTIMTAMDFLAEIGFNVVFPVVWKQAATLFPSRVLATTLGTTPQTISQNRDILAEVITAAHQFELKVIPWFEYGFASSYKSNGGKLLQRHPEWSGRDRQGNLLSKNGFEWMNALHPQVQNFMLEMILEVVQNYDIDGIQGDDRLPAFPSEGGYDQYTCDRYQQEFGCPPPANPKDKRWLQWRAEILTDFLAQLYQQIKAINPHLIVSMAPSIPGWALQEYLQDITTWLERGLVDFIHPQAYRRDFRSYQGIINSLVWDYGKKGYLSRLAPGILIKIGNYTINPDYLRQAIAYNRSRGINGEVFFFYEGLHANNNQLAKILKTIYTQPAKFPPTIL
>NZ_AP018254.1|WP_096621841.1|2685318_2685972_+|GTP-cyclohydrolase-I-FolE
MTFSISPEQTTADELISSLSLQQKPQVTEAEMMQAVRTLLIGLGEDPDREGLKDTPKRVMKALQSLTKGYHESLDELLNGAVFTEDANEMVLVRDIDIFSSCEHHILPIIGRAHVAYIPNGKVIGLSKIARVCEMYARRLQVQERLTLQIADALQGLLKPQGVAVVVEATHMCMVMRGVQKPGSWTVTSAMRGVFAEDARTREEFMNLIRHSPRFHG
>NZ_AP018254.1|WP_096621840.1|2683836_2684859_+|GTP-binding-protein
MTTSNENEYIIPDIPKRGMPVTIITGFLGSGKTTLLNQILQNKQDLKVAVLVNEFGDINIDSQLLVSTDEDMVELSNGCICCTINEGLVDAVYRVLERDERVDCMVIETTGVADPLPIILTFLGTELRDLTNIDSILTLVDAEAFGPDHFHSEAALKQITYADIILLNKTDLVNRDKIDEIEDFIHDVKLNPKILHTQYGKVALPLILGVGLTPEDLYTYLQNSEEDHHHHHDENEHHHHHHSHHLENDGFVSCSFQFNRPFDVHKFEHFLTEEMPTDVFRAKGILWFSESELRHIFQLSGPRYQLDADEWKTQPKNEVVFIGRNLDKNKIHTLLSNCLL
>NZ_AP018254.1|WP_096621838.1|2682580_2683147_-|recombination-protein-RecR
MEQLQRLPGVGPKTAQRLALHIIKRPEAEIEALAKALVEAKKQVGLCQVCFHLSSEPVCEICRNPNRDNGVICVVVDSRDVIALEKTREYKGKYHVLGGVISPIDGIGPEQLTIQALVRRVSQQQPREVILAISPSVEGETTTLYVGQLLKPFTKVTRIAFGLPVGGDLEYADEVTLARALEGRRELE
>NZ_AP018254.1|WP_096621852.1|2697079_2697763_-|CAP-domain-containing-protein
MRKISLFLPLILVSSALAIFGETLQVFLGSKNNSQVIAQTGDISQLDRQVVAEMNKVRANPQSYIPILENYRRKFRGNRVQINHNTFLQTQEGVKAVDEAIAFLRSARPAGQLRLSTGMSRAARDHVRDQGPKGTIGHRGSDGSTPFTRMNRYGKWQQTAAENIAYGPNQAQDIIMQLIIDDGVPNRGHRVNIFNPAFRVTGVANGNHSRYRTMSVIKYAGGYQEGS
>NZ_AP018254.1|WP_096621853.1|2698197_2699607_-|hypothetical-protein
MNKVRVCLSILGLTATGLLADSVTKKATAKTIEPPTSNQNWNAKLRYRQTAKYPIGFTARTPQSTSSLITSNTSSPSSDRTFSSIYDIAQKRNHQPVQISYRAADLHLQTAQNIPVPAPENLPTIPPDHQYQQSDYNSPITPPELKYQQSEHHPQNTIPETKYQQPVETQPTHYQEKYQENYPRNEYEYKQQQFQVKPVDQHHIKKAQKLRVIPILGDKSFPGISASLEDTEKFVLQETEYQDVNKWSITPEIGTLGAGFSAKKRLNHQFDARVGVHMGSLGLGEYKNDKGDDKHDDHPDHDGHEKPHNYLSYDSNLNLFNVSTLMDYRPWKNSGFYITSGFVFHNNHVNSDANLKLSEDGYFTYNGNHYTPNDITAVKGKVSFPNKIAPYLGIGWQKPVKYGDKWGLSMNLGVMFPGAPNVELTPQIGNEGLRDQILADTKAEEKAIEEDLKGMGVYPVLSVGVSYHF
>NZ_AP018254.1|WP_096621855.1|2700714_2702112_+|AtzE-family-amidohydrolase
MLNLESADAISIATLVRQSKVSAVEVIQATLKRIAAYDSQINCFTHITVDSALADARRIDTEVALGNQPGLLAGVPFAVKNLFDITGVTTLAGAKINAENPPASQDATAISKLKQAGAILVGALNMDEYAYGFVTENSHYGATRNPHDRRRIAGGSSGGSAAAIAAGLVPLTLGSDTNGSIRVPAALCGVFGLKPTYGRLSRAGVALFSSSLDHIGPLTRSVRDMVIAFDILQGFDAKDPVCTSKEPCQTRDLVAHPDLTGIRIAIADGYFQQKAEPQALIAVETVAQALNIHTYITIPEAERARAAAFVITASEGANLHLNQLRDRPQDFDPATRDRFLAGALIPSNWYIQAQRFRRWYREQVREVFRKVDVIIAPTTPVTAPLIGQQTMVLDGEEILVRPYLGQFTQPLSFIGLPVLSVPIQRPGELPLGVQLIAAPYEEGKILQVAAVLEKMGIISAPVVRN
>NZ_AP018254.1|WP_096621857.1|2702205_2703525_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MPPLNPQTHQQTQGNIPPFPPTPISSNLSPANTLPKWLWRWIGILMMGGGGIGGLFLILTVNSGTPNIREIGEIPVNLVTVTTAKIEESTEFIGNLEVGRSQIIKPPTSGIVTQVFVQPGERIPKGTPMFQIDPQGLVKFVSSPQKNHPSVVNSNSNFDNQLATISVLEAEQASRRADVNFYQRQFDKYTKLVAQGEVSGDIRDNFLRKLKTAQTKLAQVESKIQLRKQNRKQNPNPESSPPPTYYIKAPFTGNLLSLQTKVGDIINRDDQLATLTQTSPLKLQIYIPANRREQLRPGMTIQILNDQGKPVGTSRVVTIANHQQNSQESILVTAIYQNSSAELEAPNFIRTRIIWKSYPGVLIPRNAVNAIAKEPFVYVSESQPQNRFVARQRKVKLGSLQGDNYQIQDGLQPGEKVIVSNLARLRDGEPISIVKGNGE
>NZ_AP018254.1|WP_157780712.1|2705012_2705345_+|hypothetical-protein
MSTNISGLQKLGLMLRSLIHRYFPSPQEGQPRTHDFTKYECGKDYIWEAGETPQQAYMTGYGANIERGDRIILTLQSQQYCYQVQAIDYYSQPEDMWIASLSIITKDATS
>NZ_AP018254.1|WP_096621860.1|2706055_2707261_+|AAA-family-ATPase
MDFDYYSGNNDYGASSRSRNNLLMSGWRPLRRDFDFNYFFHVLVNDTQEFTQKSLNLASYYADALGRRGYSWWANLLNLTSDYTRGELDKYWNYITPDPSTPNHRYAEVLGTETPISQMVSRSSIPIDYVLNRLQEITVLRVLELLGKPDIITQYYGEREFYFPIEKFTTWERLDVINSVYAYWKQHDVWLQIDPYDRGRRHYSLMAKNLAPFINKATYNLAVMLSGYQSRVGKVHADFEIRSFSPEIQNFTDAVQTAVLNQHQLAVLVHGEPGTGKTAWTQAVAKEILVALGYVIFILDHDAIANFIPPTYLERICIIINEADNLAQNRAYEVAQSNNKTEHILSLLDGTVYQSVIDESGIHSRQRLVILMTCNTTERLDPAMLRKGRVDLMCEFTRKFV
>NZ_AP018254.1|WP_096621863.1|2707902_2710164_-|transglycosylase-domain-containing-protein
MSSPQPPQKPKTLLGQLTQAVHTIQARVDFSKLALKPNARVPELWVQDAGAAQAEVYPLLGDRYVLGRSSKSCDIVVRNPVVSQIHLSLSRDSTQGQSVFSIKDENSTNGIYRGKRRITTLELRHGDILTLGPPELAASVKLQYHDPPPWYVKAATWTTYGVAGVTALLALVVGVESLRVRVRPLPTATRAPVVIFARDGVTPLREPRNISHQDLATLADFGRYIPNAVIASEDSRFHWHIGVDPLGVARALLINTRSGDVQQGASTVTQQVARSLFPEYVGRQDSLGRKFREAVVALKLEFFYSKDEILRTYLNRVFLGADVFGFEDAAKYYFDLSAKELNLAQSATLVAILPAPNAFDYCGSGRFKTIEFRNRVLRRMLEMRKISQEEYNTARRSPVGISAKVCEQQANTIAPYFYNYVFQELQQILGEELAREGNFIIETQLDPTMQKQAETALNNAIQTEGRRLRFSQGAIVTLDSSNGAILAMVGGTDFRTSQFNRAVQAQRQPGSTFKIFAFSAALAQGIPTTRAYSCDSLFWGGFRYRPCRTTTGSMTMRTGLALSENPIALRIAQQVGLDRVVQEARRMGVKSPLDPVPGLILGQSVVNVLEMTGSFASIANNGLWNRPHAISRILDSGDCRDRNDLKTCRVIYSFDRDPDANRRVLSTNVANTMTSMLQDVVTSGTGRAASIGQGEAGKTGTTDRNVDLWFIGFVPGRRLTTGIWLGNDDNSPTNGSSAQAASLWGNYMRRIAR
>NZ_AP018254.1|WP_096621865.1|2712473_2713490_-|CDF-family-Co(II)/Ni(II)-efflux-transporter-DmeF
MHVHKLENWQHSHDFSVDHHQAEKSTRIVMILTAIAMVAEIVAGTIFGSMALLADGWHMATHVAAFGITVFAYQYARHHAKNPKYSFGTGKVSVLGGFASAVALAVVALMMGVESITRLFVPEKIQFNEAIAVAVIGLVVNLISALLLQEHHHHDHHEHHHHHHHDTPQESLRDTPQESLRDTPQESLRDRNLQAAYIHVLADALTSVLAIIGLFAAKYLGWVWMDAVMGLVGVIVIAKWASGLLQDTSLILLDGSSNKKTKTDIVDAIEADADNRVTDLHLWYIGQNHLAATISLVTHYPRSPHYYKNLLSHISPLSHVIIEVNPCEGGACLELSQN
>NZ_AP018254.1|WP_157780713.1|2714194_2715652_+|precorrin-3B-synthase
MLNLTAASRREVAPSASTACPGLFYGVSAQDGMLARIRIPGGMVNYHQCYLLAEIADRYGQGWLQITNRGNVQIRGIRGEISLDDLQRLQLGGLGAELVELDALRNIMASPTAGIDPQALMDTRTWVREIDHYLKSHRELDVLSPKFSIGLDGGEKVTIRDRHNDILLVARQSLLDQSRYLQVYVNHQDTQLCITPHQVLPVIKACTQVYRQYCQENPPQNQRPHRLRQVLADWGVDGYLQKVTAYLGFSLIAVDKLDLAPGEQDQHTNNYDHIGIHNQLQPEHVYIGLVLPLGKLTTKQIRGVTAIARLYGDETLRFTPWQNLIIPHIMRSQISEVLAKLEKLELDWHLENPWHSLIACSGTQGCASSHIDTQTQAENIAQTLPKLNYPLKIHISGCEKGCASQGVSDITLVGIAKDEYKIFIGKDSHQGKFGQELYTNLNTTEITHLLTQIIQTYQTHHHDQESLQKFLSCYGIEELRQLIGR
>NZ_AP018254.1|WP_096621868.1|2715882_2716512_+|precorrin-8X-methylmutase
MTTYIRDGNEIYRQSFAIIRAEANLNGLPKDLERVAVRIIHACGMVDVVEDLEASPDAVRSGYDALVGGAPILCDSRMVAEGITRKRLPANNPVICTLGEPQVEELAQKLQNTRSAAALELWRSHLEGAVVAIGNAPTALFYLLEMLDHGAAKPALILGFPVGFVGAAESKAALAANSRGIPYITLHGRRGGSAITSAAVNAIAQEEEI

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Crispr_ID: NZ_AP018254_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_32

3177397-3177499

Orphan

Consensus_repeat	Method
CCAATCCCAGTCAACCCAGAACTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_32

>merge|NZ_AP018254|32|3177397-3177499|CRISPRCasFinder
CCAATCCCAGTCAACCCAGAACTTCACCGAATCCAGTCACAACTAACCCCCCACCAGTCTCCAATGTTGGCTCAACAACCAATCCCAATCAACCCAGAACTTC

>NZ_AP018254|32|30|3177397-3177499|CRISPRCasFinder
CCAATCCCAGTCAACCCAGAACTTC	ACCGAATCCAGTCACAACTAACCCCCCACCAGTCTCCAATGTTGGCTCAACAA
CCAATCCCAATCAACCCAGAACTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096622314.1\|3171949_3172570_-\|DUF1877-family-protein	unknown	unknown	gnl\|CDD\|378105
NZ_AP018254.1\|WP_096626163.1\|3183211_3184243_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173799
NZ_AP018254.1\|WP_096622329.1\|3189479_3190241_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372967
NZ_AP018254.1\|WP_157780735.1\|3188890_3189160_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350679
NZ_AP018254.1\|WP_096622317.1\|3173887_3173974_-\|cytochrome-b6-f-complex-subunit-PetN	unknown	unknown	gnl\|CDD\|134722
NZ_AP018254.1\|WP_096622328.1\|3186703_3186874_-\|DUF2256-domain-containing-protein	unknown	unknown	gnl\|CDD\|378353
NZ_AP018254.1\|WP_096622323.1\|3180803_3182624_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|236018
NZ_AP018254.1\|WP_096622313.1\|3169907_3171851_+\|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096622311.1\|3165854_3169685_-\|cobaltochelatase-subunit-CobN	unknown	unknown	gnl\|CDD\|235663
NZ_AP018254.1\|WP_096622309.1\|3163972_3164431_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|366663
NZ_AP018254.1\|WP_096622318.1\|3174059_3174593_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_172892779.1\|3172598_3173384_-\|pantothenate-kinase	unknown	unknown	gnl\|CDD\|237353
NZ_AP018254.1\|WP_096622322.1\|3179404_3180244_-\|deoxyribodipyrimidine-photolyase	unknown	unknown	gnl\|CDD\|223492
NZ_AP018254.1\|WP_096622326.1\|3186075_3186654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622325.1\|3184726_3185686_+\|calcium/sodium-antiporter	unknown	unknown	gnl\|CDD\|273039
NZ_AP018254.1\|WP_096622316.1\|3173713_3173878_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622310.1\|3164669_3165833_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225943
NZ_AP018254.1\|WP_157780734.1\|3185687_3185828_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622320.1\|3174720_3176046_+\|TIGR03279-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|132322
NZ_AP018254.1\|WP_096626165.1\|3187031_3188915_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320692

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096622314.1\|3171949_3172570_-\|DUF1877-family-protein	gnl\|CDD\|378105	pfam08974, DUF1877, Domain of unknown function (DUF1877). This domain is found in a set of hypothetical bacterial proteins.	0.00032284
NZ_AP018254.1\|WP_096626163.1\|3183211_3184243_+\|S8-family-serine-peptidase	gnl\|CDD\|173799	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.74851e-101
NZ_AP018254.1\|WP_096622329.1\|3189479_3190241_+\|hypothetical-protein	gnl\|CDD\|372967	pfam14218, COP23, Circadian oscillating protein COP23. This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.	2.83291e-33
NZ_AP018254.1\|WP_157780735.1\|3188890_3189160_+\|hypothetical-protein	gnl\|CDD\|350679	cd17921, DEXHc_Ski2, DEXH-box helicase domain of DEAD-like helicase Ski2 family proteins. Ski2-like RNA helicases play an important role in RNA degradation, processing, and splicing pathways. They belong to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.17901e-06
NZ_AP018254.1\|WP_096622317.1\|3173887_3173974_-\|cytochrome-b6-f-complex-subunit-PetN	gnl\|CDD\|134722	PRK02529, petN, cytochrome b6-f complex subunit PetN; Provisional.	1.76029e-05
NZ_AP018254.1\|WP_096622328.1\|3186703_3186874_-\|DUF2256-domain-containing-protein	gnl\|CDD\|378353	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256). Members of this family of hypothetical bacterial proteins have no known function.	4.99024e-19
NZ_AP018254.1\|WP_096622323.1\|3180803_3182624_-\|aspartate-kinase	gnl\|CDD\|236018	PRK07431, PRK07431, aspartate kinase; Provisional.	0
NZ_AP018254.1\|WP_096622313.1\|3169907_3171851_+\|GAF-domain-containing-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.50641e-58
NZ_AP018254.1\|WP_096622311.1\|3165854_3169685_-\|cobaltochelatase-subunit-CobN	gnl\|CDD\|235663	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed.	0
NZ_AP018254.1\|WP_096622309.1\|3163972_3164431_+\|transcriptional-repressor	gnl\|CDD\|366663	pfam01475, FUR, Ferric uptake regulator family. This family includes metal ion uptake regulator proteins, that bind to the operator DNA and controls transcription of metal ion-responsive genes. This family is also known as the FUR family.	6.28696e-48
NZ_AP018254.1\|WP_096622322.1\|3179404_3180244_-\|deoxyribodipyrimidine-photolyase	gnl\|CDD\|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	3.99719e-61
NZ_AP018254.1\|WP_172892779.1\|3172598_3173384_-\|pantothenate-kinase	gnl\|CDD\|237353	PRK13331, PRK13331, pantothenate kinase; Reviewed.	1.60231e-111
NZ_AP018254.1\|WP_096622325.1\|3184726_3185686_+\|calcium/sodium-antiporter	gnl\|CDD\|273039	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein. This model models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of > 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat. [Unknown function, General].	9.48339e-49
NZ_AP018254.1\|WP_096626165.1\|3187031_3188915_+\|M48-family-metalloprotease	gnl\|CDD\|320692	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein. This family contains peptidase M48C Ste24p protease bepA (formerly yfgC)-like proteins considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. Several members of this family also contain tetratricopeptide (TPR) repeat motifs, which are involved in a variety of functions including protein-protein interactions. BepA has been shown to possess protease activity and is responsible for the degradation of incorrectly folded LptD, an essential outer-membrane protein (OMP) involved in OM transport and assembly of lipopolysaccharide. Overexpression of the bepA protease causes abnormal biofilm architecture.	1.08253e-67
NZ_AP018254.1\|WP_096622310.1\|3164669_3165833_-\|peptidoglycan-binding-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	1.39399e-24
NZ_AP018254.1\|WP_096622320.1\|3174720_3176046_+\|TIGR03279-family-radical-SAM-protein	gnl\|CDD\|132322	TIGR03279, cyano_FeS_chp, putative radical SAM enzyme, TIGR03279 family. Members of this protein family are predicted radical SAM enzymes of unknown function, apparently restricted to and universal across the Cyanobacteria. The high trusted cutoff score for this model, 700 bits, excludes homologs from other lineages. This exclusion seems justified because a significant number of sequence positions are simultaneously unique to and invariant across the Cyanobacteria, suggesting a specialized, conserved function, perhaps related to photosynthesis. A distantly related protein family, TIGR03278, in universal in and restricted to archaeal methanogens, and may be linked to methanogenesis.	0

>NZ_AP018254.1|WP_096622320.1|3174720_3176046_+|TIGR03279-family-radical-SAM-protein
MATIQPARITKVLPDSIAAEVGFEVGDAIVSINGVQPRDLIDYRFLCADEYLELEVLDASGQTHHVELEKDYDEDLGLEFASALFDSLIQCNNRCPFCFIDQQPPGKRESLYYKDDDYRLSFLYGSYLTLTNLPEREWQRIEQMRLSPLYVSVHATEPDVRIRLLKNPRAGKILEQIAWFQARRLQIHAQVVLCPGINDGKHLEQTIRDLASFQENDVPAVTSVAVVPVGLTRFRPPEDELVPVTPSKAKEVISQVRSLQQEFRQKYGTTFVWLADEWFLIAQEDLPDESEYEDYPQIDNGVGSIQLFIKQFMAISAQILPTKLTKQKRLTWVVGNAVEHAFQPLLTRLNQVEGLQVQMQALNSDYWGQSISVTGLLTGHDLLLKLRNCDLGEGILLPSVMLKHGESVFLDDVSVEEVSQKLNVPIYPVAGVEELIRQCIS
>NZ_AP018254.1|WP_096622318.1|3174059_3174593_+|hypothetical-protein
MGKTIDRLLKPDLVRERLESLKAGVFAAIAVVCTHWLISLLMWGFSSLGYNLELGNSGFLTRFQVINTLLGSTFALFSGFLFGVTYRYIVREDTNFHLETGAIAAFALVRGMAQLEVVSQNWLSDNQQSTLLSSLWFEKVNLSIIFLIFGESFLWFAAARLILDWAMKQGWLKRFSQ
>NZ_AP018254.1|WP_096622317.1|3173887_3173974_-|cytochrome-b6-f-complex-subunit-PetN
MVLTLGWVSLLVVFTWSIAMVVWGRNGL
>NZ_AP018254.1|WP_096622316.1|3173713_3173878_-|hypothetical-protein
MENTFLNYLALLALVLLVVTTLSIGYLTLSGWRDRRLLEEEKRNLRLRTTPKRK
>NZ_AP018254.1|WP_172892779.1|3172598_3173384_-|pantothenate-kinase
MPSAIYIALMIGNSRYHWGLCQHTQLIHSCSSPYLSTPQIQQLIHQPTLNHFLTILNPPSFPTSSLPVPLFLASVVPKQTQLWLNYPHLRMISLADIPIANMYPSLGIDRALALFAATKSFGSPVLVIDAGTALTFSAVDAEQNFVGGAILPGVGLQLTMLGNQTGQLPHIDLSSQLQSRWAMNTNDAIQSGIIYTLLAGIKDFIENWRQSFPDGKIVITGGDTMILSNYLQTIYPQISEQILIEKNLVLQGICQVSHGLE
>NZ_AP018254.1|WP_096622314.1|3171949_3172570_-|DUF1877-family-protein
MEMSLYQMPPSVLQKIQEYPVLKTILPVAEDISDPNHWRTLEFYLTPDVIAQVKEDIPSILAAGESGYFELGNIWYLLHWYLTGDSDKFMRLQYLVQHTNDSHLLLVNALSGGILIDEGLLTDCQYFNAEIVVELAQGLTKISEEDFYQRWNQLPPPLENSLVYDWYTQIEGEDMQDFQALFLELVDYYEEAAEDGNAILRWDSWL
>NZ_AP018254.1|WP_096622313.1|3169907_3171851_+|GAF-domain-containing-sensor-histidine-kinase
MTSSPDVSFSRTLPNCLYQQLGKLLQQMAQTRDNPPMVLTDALTVRIPHLSWPQMKFLVVLSDGFNAMLQAKPSQLTLSSNLQSIHEQKFQLTESTLLDVELTFDHQAIATFVSCLVNLFPPHLQTYQKLQPYCQDLSPNDITLQQKFTLLLLDFSLTLPAWQVQQPGNFQSESEPTIAHNNSACLHVETALQKQIAQEKLLNQVNTQIRKSLDLPVIMQTAVARVREFLELDRIVVYKFEYPNSSNHSPVVNGNYHGGNGCIVYEVRSSTDITSVLNYSEETCFTPTNECWLKYQKGFTLAVEDVEQTYPLESCLLEFMRTCQVRAKFVAPIVFENRLWGLLIAHQCTQTRRWQENETNLLTSIAEQLAIAIHQAELMRSLTQEKLLLEQRVVERTSELHDALVAAEAAGRVRNEFLATISHELLTPLTYVIGMSSTLLRWSFGELSQRQRDYLQTIHDSGEHLLGMINDILDLSQIEAGKTVLKVTNFSLSQIAQASIKSIEAKAVNQQINLKLDLKTNQHQDDFTADPHRIQQIIGNLLSNAVKFTPAGGNVILRVWVEENTAIFQVEDTGIGIPENQLPRLFEKFHQLDTPYRRRYEGTGLGLALTKQLVELHRGRIEVESTEGIGSIFTVWIPMQRITEAIR
>NZ_AP018254.1|WP_096622311.1|3165854_3169685_-|cobaltochelatase-subunit-CobN
MHRTSTTSVGLNSQFASISFIEQTTAPIVLLTAADTDIQTLAAAISRLPKTFPALRVANILQLQQQISIDNYAEAVLTHARVIILRLIGGRSYWPYGIEVVQEIVANHHTTLIVMPGDDALDFDLISLSNLPPKTVQQIWRYFNEGGIENFVNGLKFITDTCFHTSYQPPPPQIVPRVGLYLWNNWERDRRQNTGDRIQENIDFSPCSYPPQKAAILFYRAHYLAGNTQAIDALCGALIHHNLIPIPVFISSLREPDVQADLLRILAEEGKNRPNIILNTTSFSLARIDSDSPQLDLWRQLDVPVFQVILSGAFRETWELSNQGLTPRDMAMNVALPEVDGRIITRAISFKALQTHHPDLETDVVVYEPIPDRIDFVAQLAANWVKLQQKPPQKRRLAFILANYPSRDGRIANGVGLDTPQSCVEILQALQKAGYSLDDIPSNGDELITLLTSTITNDPESQELRPILQSLSRQDYLTFFHSLPTSIQTAINQRWGTPDTEPSVIPISGIQLGNIFIGIQPPRGYDLDPSLNFHDPDLVPNHSYLAFYYWIREFFGADAVVQIGKHGNLEWLPGKSIALSQQCYPEIALGALPLLYPFIVNDPGEGSQAKRRSQAVIIDHLTPPLTRGELYGNLHDIENLIDEYYEATTLDPKRLPLIIERLRELINQENLHLDLNLKPIPNNPDQELPINQIDAYLCDLKEAQIRDGLHILGKCPSQEQLRDLIIAIARHPNPYQIGLTRAISQSWQLDLDPLSDNFATPLTPTQIQILATKSTQPCRLVGDAVAVLEEYACELVGECLARRQDMVDSPPTPPSGHSYLRSSREWIETKLIPALTQTDREITNLLHGLDGGYVPSGASGAPTRGRPEVLPTGNNFYSVDTRSLPTESAWDVGRKAAETLIECYTQEYGEYPKTLGISLWGTATMRTGGDDIAQALALLGVRPVWDGVARRVVDLEILPISVLGRPRVDVTLRISGFFRDAFGNLIDLFAQAVAAVAELEESEEENPLAANVKIDMQAEIQQGLSPSQARTRSQSRIFGSKPGAYGSGLQGLIEAQAWEDDADLARAYINGSAYAYGSHGEPLYAPSLLKTRLSQMQIVLQNQDNREHDLLDSDDYYQFQGGLTAAVRSLKGENPTVYFGDNSQPFNPRIRHLRAEIARVYRSRVVNPKWIAGVMRHGYKGAFELTATVDYLFAYDATAQCVEDHMYTGVAQAYLFDPSVCEFIQQKNPWALRDIAERLLEAYQRNLWQDVSIQTIDKLRNLVHQAEASIENKQVV
>NZ_AP018254.1|WP_096622310.1|3164669_3165833_-|peptidoglycan-binding-protein
MENFAYSHFACDSQDPNFDDSLLLNPDFSLDLHKLSSRAWQHLLPLALVLAIMTSYGSALALEKGDRGPSVRRLQEQLRNAGFYQAPVTQVYDSRTEAAVRKFQQAAGLEQNGIAGNTTLEKLNNWRAPKASTQNRKNVVVPTTTVKPPAKQPTATPAANRQPTTTTASRPATNNYGFLRRGDEGEAVRVLQERLRVAGFYYGNSTGIFGPITEEAVKNFQKAYNLQPDGIVGPMTQRVLPPVGVGGPQETPPPRTRNRDVLQLGDRGEAVRVLQAQLIEAGYLQGKPNGHFGPYTADAVRRFQSANYLASTGIAGPTTRAKLYNLVNSDAPKQGEFSVLEIQRRLRERGFYKGSLNGVMNDDTRKAIRQAQEFYGISLSDVRTGNF
>NZ_AP018254.1|WP_096622309.1|3163972_3164431_+|transcriptional-repressor
MSSVYSASSLKAELNERGWRLTPQRETILHIFQNLPQGEHLSAEDLHARLVEEGESISLSTIYRTLKLMARMGILRELELGEGHKHYEINQPYPHHHHHLICVRCNATIEFKNDAVLKAGAKVAQKEGYHLLDCQMTIHAICPKCQRSLMPV
>NZ_AP018254.1|WP_096622322.1|3179404_3180244_-|deoxyribodipyrimidine-photolyase
MRRDFQNREELIDYLREQFPDAVRNDDHVSPIHGGYKIARQRLQKVDPVKYAKTRNFLNGAVTRLSPYLRHGVLSLREVRDFVLERVNHDDEAMKLINELGWRDYWQRLYFKLADKIWENQEDYKTGFASSEYAPELPDDIRNGTTGLVCIDAFRQELYTTGYLHNHIRMWLAAYIVHWRRVAWQAGARWFLEHLLDGDPASNNLSWQWVASTFSHKPYFFNRENLQRYTEGLYCQGCPLLGQCDFEGSYEELTIKLFPKGEFQKQDNSQSWQKGKRRK
>NZ_AP018254.1|WP_096622323.1|3180803_3182624_-|aspartate-kinase
MALIVQKYGGTSVGSVERIQAVAQRVCKSVNAGNSLVVVVSAMGKTTDGLVKLAYEISPTPNRREMDMLLSTGEQVTIALLSMALQECGQAAISMTGAQVGIVTEATHTKARILQISTERIQQHLQEGKVVVVAGFQGISSTANLEITTLGRGGSDTSAVALAAALGADYCEIYTDVPGILTTDPRLVPEAQLMAEITSDEMLELASLGAKVLHPRAVEIARNYGVPLVVRSSWSDAPGTWVRSTRPPERSLINLELARPVDAIEFDTNQARVALLRVPDRPGVAASLFGEISRQNVDVDLIIQSIHEGNTNDIAFTVMTPILPKAEAVAAAIAPALSNPGEHGSDTAEVMVKSDIAKVSIAGAGMIGRPGVAAKMFATLAEAGVNIRMISTSEVKVSCVVDVCDCDRAVSALSQAFEITSSPIRSVVDIHPGKNTGKPPVRGVALDQNQARIAIRHVPDKPGMAAKLFGLLAEKTISVDMIIQSQRCHIINGVPTRDIAFTVARMDALAAQEMLITAGKEYGWGEVVLDQEISKVSIVGAGMVGQPGVAAKMFTALAQNQINIQMIATSEIKISCVVSQSEGVKALQVIHAAFGLAGSEKFVVPA
>NZ_AP018254.1|WP_096626163.1|3183211_3184243_+|S8-family-serine-peptidase
MEIPNPNLHFTSSPLSSTSNPQPTYTTQSYNFSPVYGDGLIDAANAVATAIGLPRFSDIPNHSNIYTWGLDAISVPEVWTQGYTGEGVVVAVIDSGVDFTHPDLDDNIWINTGEIFGDGIDNDGNGYIDDLIGWDFVGNDYNPMDEETHGTHVAGIIAAEANGYGMVGVAYNAKIMPIRVFDANGRGTQKDFIKGIIYAADNGADVINLSLTTGGYSPEVEAAVKYATERGAIVVMAAGNNGGEEPVYPAALAKYWGIAVGAIDINYNMADFSNRAGSDSSLYYVVAPGKDIYSTTPNDTYGFLSGTSMATPYVSGVAALMLSANPDLTPADIRQIIAATAIG
>NZ_AP018254.1|WP_096622325.1|3184726_3185686_+|calcium/sodium-antiporter
MDLLIWLGIFVVSLAVLITAARFFTDAAEIIGLALGMSPFVIGVIIVSIGTSLPELVSSVIAVSQQVSEIVPGNVIGSSISNLFFVLGIASLFTRAAIQLGDQYIFIDLNFLMATVFIVVLTMYDGKITVGEGIICLVAYCIYVFYLLKDGSTPIDILLDENVKAEGRKGNIRIQDVLIVTLGGIFIYLGARYTIISLEKLAEIMSISKAIVSVTLLSFGTTLPETVVSATASRQGKGEIAIGNILGSCIFNGLAISGVASFFGTLIVTPEVLRFPLPIYCVAALLFYLLTQDKNVSRWEGLIFLLMYIFFIGKIANIL
>NZ_AP018254.1|WP_157780734.1|3185687_3185828_-|hypothetical-protein
MKEKWADFWDKVNIALNAVIEGCSSQAENKRGMRRGDYAIAGFKVS
>NZ_AP018254.1|WP_096622326.1|3186075_3186654_+|hypothetical-protein
MKKKLEYFQEKLISLPEIGLKYAEMLRRLEKYQNIILIYTRDYTDKLQEVQSISPGEDLSFLSFFTEQTSLSFQEEISAELQYFHHGFSLIDKAIASIRGQVAIEQTKREREEQVLIFALSTGIAVGGNVASSIQVALPEHNEDKGINGIKPENFFMSFFASLIFSVIIGLLIWKYFGKSLERKKIIHEDDR
>NZ_AP018254.1|WP_096622328.1|3186703_3186874_-|DUF2256-domain-containing-protein
MGRTRSKSDLPTKICPVCDRPFTWRKKWADCWDDVKYCSERCRRRRSQANEKGNGE
>NZ_AP018254.1|WP_096626165.1|3187031_3188915_+|M48-family-metalloprotease
MKGRWKSWFLALTWLLLSMGTSILVVLTQVRVSPALESVPSMGGEVGMESSSPSDLSDLKTASHEGLYTTKSENNSSFPLPTPHSPPPIYKQGKNPNISTGNAEVTVNHQFPTPLVVSEDIQIKTEPTTDNQATEAKNPENKPSETKEPENPETSVSGSQEEGNPLTPEEIARREQFIAADKLFLAGNVAEAEKIYRQLKEPFANTTATVENRQPAITDPEQLPPRGRVYWREAEAGMAAKLQTRVLIPLKLLVEEVPEFIPGYIRYAQALREYGQEKEALRILEQGTTRYPQQPELVKARVEALASAKKYMEASLAARQYAILYPQDPLAPEFIQLADDNLRRYKSHIRREIRGNAIANIITGAIGYAVTGSLLGPFSALDSTLLLLQGEESIGESVAKQAQRQLNLVKDETVVNYVNEIGQKLAQVAGRKEFKYEFFVLPEPELNAFALPGGKIFINAGAIDKANSEAELAGLIGHELAHVVLSHGFQLVTQGNLISNLTQYLPLGGTVGQLFSLSYSRDMERQADVLGTRLIVASGYAADGLRNLMATLEKEQKNTPPEWASSHPGGRDRVKYLEAMIVENGYNRYGYEGVKKHIEVQTKVKEIIKQTKACRKDRKKCPKKERE
>NZ_AP018254.1|WP_157780735.1|3188890_3189160_+|hypothetical-protein
MSEEGAGVEDAHRHTKSRTTKCKTLAWRSQICGIERLATAESFALCTPTGSGKTRIAELAILQRRPDFLNTYDFTLDVESRIVSSKVYV
>NZ_AP018254.1|WP_096622329.1|3189479_3190241_+|hypothetical-protein
MAQPIKLLVLGGLSLSLLVGNAALAQSNDDFVVPTGGNSSTLPTGTTNPSTGSTVQTAERFTCQFHNGQYTVMYQPRSQPGQFFPWATPRALGGGWDAQRRCLTIAQRLELYRPDGLLELQTAVENRHNILCVTTEANPSCRIVLTVPPDRDPFIVRNSVFENLVTADSGQQTFGVNTYTTSGNQVENIYNMGRSILGGRRPQASNSRTAINLKPYLAREDGGTATGLRNAVRLQPNQTRPQSATKLKPGNFR

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Crispr_ID: NZ_AP018254_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_33

3228154-3228239

Orphan

Consensus_repeat	Method
TATCTTATCTAGAGACCATGCTCTGCGT	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_AP018254_33

>merge|NZ_AP018254|33|3228154-3228239|CRISPRCasFinder
TATCTTATCTAGAGACCATGCTCTGCGTGGTCACCCACTCAACGAATATCTTATCGAATATCTTATCTAGAGACCATGCTCTGCGT

>NZ_AP018254|33|31|3228154-3228239|CRISPRCasFinder
TATCTTATCTAGAGACCATGCTCTGCGT	GGTCACCCACTCAACGAATATCTTATCGAA
TATCTTATCTAGAGACCATGCTCTGCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096622362.1\|3225499_3227737_-\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|225752
NZ_AP018254.1\|WP_096622360.1\|3224227_3224842_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_AP018254.1\|WP_096622357.1\|3221542_3222205_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622373.1\|3238055_3239144_+\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_AP018254.1\|WP_157780738.1\|3216225_3217485_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018254.1\|WP_096622349.1\|3211328_3211628_+\|30S-ribosomal-protein-PSRP-3	unknown	unknown	gnl\|CDD\|235062
NZ_AP018254.1\|WP_096622363.1\|3228524_3229193_-\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|223776
NZ_AP018254.1\|WP_096622352.1\|3213829_3215548_-\|flavin-reductase	unknown	unknown	gnl\|CDD\|223503
NZ_AP018254.1\|WP_096622367.1\|3234007_3234847_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622374.1\|3239578_3239839_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622368.1\|3235150_3235732_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622356.1\|3220641_3221496_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622354.1\|3217879_3219511_-\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962
NZ_AP018254.1\|WP_096622366.1\|3232809_3233562_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_AP018254.1\|WP_157780739.1\|3229298_3229445_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626169.1\|3239952_3240771_+\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|377700
NZ_AP018254.1\|WP_096622371.1\|3236423_3237020_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|378279
NZ_AP018254.1\|WP_096622350.1\|3211731_3213459_-\|flavin-reductase	unknown	unknown	gnl\|CDD\|223503
NZ_AP018254.1\|WP_096622365.1\|3231415_3232762_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|274368
NZ_AP018254.1\|WP_096622359.1\|3222473_3224075_-\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096622362.1\|3225499_3227737_-\|DUF839-domain-containing-protein	gnl\|CDD\|225752	COG3211, PhoX, Predicted phosphatase [General function prediction only].	4.80283e-105
NZ_AP018254.1\|WP_096622360.1\|3224227_3224842_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.46646e-32
NZ_AP018254.1\|WP_096622373.1\|3238055_3239144_+\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_AP018254.1\|WP_157780738.1\|3216225_3217485_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.32448e-23
NZ_AP018254.1\|WP_096622349.1\|3211328_3211628_+\|30S-ribosomal-protein-PSRP-3	gnl\|CDD\|235062	PRK02724, PRK02724, 30S ribosomal protein PSRP-3.	1.60032e-68
NZ_AP018254.1\|WP_096622363.1\|3228524_3229193_-\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|223776	COG0704, PhoU, Phosphate uptake regulator [Inorganic ion transport and metabolism].	4.84433e-44
NZ_AP018254.1\|WP_096622352.1\|3213829_3215548_-\|flavin-reductase	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	3.95635e-163
NZ_AP018254.1\|WP_096622354.1\|3217879_3219511_-\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	8.27118e-44
NZ_AP018254.1\|WP_096622366.1\|3232809_3233562_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.06567e-97
NZ_AP018254.1\|WP_096626169.1\|3239952_3240771_+\|prepilin-peptidase	gnl\|CDD\|377700	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain. This family is found at the N-terminus of the pre-pilin peptidases (pfam01478). It's function has not been specifically determined; however some of the family have been characterized as bifunctional, and this domain may contain the N-methylation activity (EC:2.1.1.-). It consists of an intracellular region between a pair of transmembrane. This region contains an invariant proline and two almost fully conserved disulphide bridges - hence the name DiS-P-DiS. The cysteines have been shown to be essential to the overall function of the enzyme in, but their role was incorrectly ascribed.	2.7644e-44
NZ_AP018254.1\|WP_096622371.1\|3236423_3237020_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|378279	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087). This domain, found in various hypothetical prokaryotic proteins and transcriptional activators, has no known function. Structural modelling suggests this domain may bind nucleic acids.	4.41528e-19
NZ_AP018254.1\|WP_096622350.1\|3211731_3213459_-\|flavin-reductase	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	1.25005e-154
NZ_AP018254.1\|WP_096622365.1\|3231415_3232762_-\|histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	2.24659e-48
NZ_AP018254.1\|WP_096622359.1\|3222473_3224075_-\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	2.72883e-45

>NZ_AP018254.1|WP_096622362.1|3225499_3227737_-|DUF839-domain-containing-protein
MSITRRDFLLLMAGSTGAIALGNLTGCERRSVETATQMTKAVFPFNPIRGVIPVETLGLPVAQQKTEYASLAVADDVVLPEGYGYQIVAAWGDKVGDSRFGYNNDYLSFVPIPGQAQAGYLTVNFEYISAIPWMETYTKVIGKSLPFAEVKASLQKSSGKIDAFALADTDPLKAQIREICREALIDQGLGIISIRQGDDGSWQKTNSSVERRITGISGLEDKRYLRVSGPAIAIFRKSQGIGYIDKLGDRIIGSFANCAGGTTPWGTVLSAEENFQTQVPEPVYPDGTSLNPKERPFAIDDEEIMGQGNVFGLAGNKYGWIVEVDPSNPKDFGTKHTWLGRYRHEAVGIRVEPGKPIAFYSGCDRRGGHVYKFVSRDPVTTVTDKSNSQLLSSGMLYAAKYNPDGTGKWIPLAPDTPIAPDSPQDIAGNILPLPPGPPASPKVGKKLLSFNDEFEPIEGFHFVAKSNADINVYKQKYRQLADLYVGTPEEKQGIILIDAHYAANAVGATCTARPEDTVVAPNGDLYISFTSGSPGKEGGPDLRIFAGPQGETPYEYGWVMRLVEDNNDPSASTFRWQMLATGGEPASGGMGFANPDNLLLDRSGNVWMVTDISTKKMNNAVKSRTDDKGKTASISGLFGNNSLWYIPTSGEKAGQAFLFGTGPMECEMTGPCFTPDNNTLFLSVQHPGEAYGIRKNQASETREFLVRTTTGEVFTQSRQVPLGSNWPGKTPDAPPKPAVIAIRKT
>NZ_AP018254.1|WP_096622360.1|3224227_3224842_-|Crp/Fnr-family-transcriptional-regulator
MMYSSNRNTNPAISGQNANVTPGSLPQRLFTRREIIPQRNDVLWRIERGAVRTLTWSEDGTFITLGYWGPGDLIGYPLSRVKPYQIECLTSVEVSVLPPHLWHQDVNALLSHIQQAEELLSIVHRKPISLRLWQFLVWLSEKFGRDVEQGKLIDLNVTHQEMAEVLNTTRVTVTRLLQQFEEEQIMVRHKRRIILRSPENNVRK
>NZ_AP018254.1|WP_096622359.1|3222473_3224075_-|iron-uptake-porin
MTKLFWNVIKLSPVVVAASFLAANTAFASETNKVTSVASIAQEANSIGQVTSVSQFSDVQPTDWAFQALQSLVERYGCIAGYPDGTYRGSRALTRYEFAAGLNACLDRINELIATSTAELATNEDLEILQRLQEDFSIELATLRQRVDTLEARTKKIEAQQFSTTTKLRGEAIFNLTNAWGDNADGNTNTKVNSNETFGNRVRLTLESSFTGKDRLQLRLNAGNIASNQTQTGTAMTRLGFDGNSPSDNAVTIDKANYRFNLGKNATVQIDATGAELNDNVENYNPLFQSSASGAISRYGRFSPIYRAGAGGAGVTLRYNPKGKFGADVAYISREANTATPGQGAFEGDNVWFGQLNFKPSDSFRLGLTYSRAYSSVPGFQSLTGATGSGFASNPFNSTTIGTISNNYGVQASFDLGKTATLAGWYGLTKAEQTSGPNTADINYWAASLGVRDFGAKGNMLGFIFGQPPKVTDNTITGRKDANGTSYHLETLYRMRINSNVSVTPGLLVIFNPEHNNNNNTVYVGTLRTTFSF
>NZ_AP018254.1|WP_096622357.1|3221542_3222205_+|hypothetical-protein
MKKQGLAFSLGLGLFLFAALPTSVNAGSSPAPGASNNSSTSTGGTFAPVPPPTPAPGTNVTVGANGQLTVPPAVQVNVNRVAAAIVRANPSSVVVVIITRGTGANAAINQVRTVIVNVGVSPARVQALVNALTSLFRGSNRSATVPSELLVASGTLENLQLAQSETPVVDVNQLNAAINAYNEIIRTSDTATLRRLAQNQEFLEIGRVLRELRAALVAGK
>NZ_AP018254.1|WP_096622356.1|3220641_3221496_+|hypothetical-protein
MNTQALRLILISSVVPATLFLSAAIAQANSSGVVGDTFGEANKLRQQLLIDPIVVPTERPAAVPGSTAGTPTAYGASAGQAYVGVAGYVPLKQGYVDGSVSLGAGFGNPVDSVGVELGVNLTSIGGQNFDFAGSGTVGLVVHKHLPNGTAVAVGWSDPVKWGDAKGAKDTIYGVVTKSFDLNSESSGNKLPLTVSVGVGSGTFRSKGAIKAGDNSPNLFVGAGLRVSPEAAIVSSWTGNSLNVGGSFAPFKKTPLVINTVVTDVTNNLGNGAGLSISGGYSIQF
>NZ_AP018254.1|WP_096622354.1|3217879_3219511_-|iron-uptake-porin
MTKGIRDVLKVSPVILAASFLAGNGAIASEVNQNVTSVASLEQQQNSLGQVTSVSQFSDVQPTDWAFQALQSLVERYGCIAGYPNGTYRGNRALTRYEFAAGLNACLDRVNELIATATADLVSKEDLATLQRLQEEFAAELATLRGRVDTLEARTAELEANQFSTTTKLRGEAIFNVTDTWGNLAAANGVNGENQPDSTSNTTFANRVRLSLESSFTGRDKLQTRLNAGNIVSNAGQTGTGMTRLAFDGGDNNNVELDKLNYSFNLGNAIAVKIDATGAEVYENINNFNPLFSSSATGAISRYGRFSPIYRFSQGGAGVTATFNPKGTISASAAYMARENANPNPGNGVFEGDSAFYGQIDFKPSDRLNVGLTYARSYNGTNLNTLGNPVLSSGLIGATGSRNANAPFGGVPTEANSYGVQAAFGITDKITLAGWYGLTEASSATSNASADINYWAATLGIRDLGSRGSTFGVIFGQPPKVAGASNGGLRDRGGTSYHLETLYRFNVTNNISLTPGLLVIFNPEHNNTNDTVYVGTLRTTFRF
>NZ_AP018254.1|WP_157780738.1|3216225_3217485_+|tetratricopeptide-repeat-protein
MPATSTPQPKNQVLEQVQNSPQSQQIEKRVQEEANRTLIELLEPTINLINFNLGIINFWLIAIPLIGAGGFFIFRAAIIRKLEKDTREKIKEEIDTIQKEIRETIESQINANKAEIDRLIQENKMKINEAEITMHEITARIEQLKLQIAKNIDEQRDFVEKQIEKQKAYVNDFTNDIKVKIAETLTETLKKTQEAKDEMEREKDRILQELSKLAPPLSSIPDTHQPDVQKQIQALITQLEDLKLKNPQLFLTTDDYLKQGDAFFFEGNYREAIRSYDEVIKGQEDSFLAWSSRGWALRRMGKFEEALQSYEKATQIDPNNHIGWYGLGNVLRELERFDEAIAVYHRSLEIKPDFFWSWFRLGRCYMLKSELKKALESFQKAKELDAERFQKIIHSKEEFHSLQEQEYFRILFENGTEEK
>NZ_AP018254.1|WP_096622352.1|3213829_3215548_-|flavin-reductase
MVATTETVERRLTIQTVEIAPNTTAIRSLDWDRDRFDIEFGLQNGTTYNSYLIKGEKTVLVDTSHTKFRDLYLQTLKGLVNPKEIDYIIVSHTEPDHSGLVGDVLEIAPRATVLASKVALQFLENLVHDPFSKRIVKSGDRIDIGGGHCIEFISAPNLHWPDTIFSFDHKTKILYTCDAFGMHYCSHDTFDVDLEAIEPDFRFYYDCLMGPNARSLINAMKKMAELGEIKIIANGHGPLLYHHLEFLRERYQAWSNVQAKAETIVGMFYVPNYGYADHVAHALTHGIQKTGVGVETLDISTADHQEIQELAGRAAGIIIGMPASANVAAQAGISSLLAVVKPKQFVGFFECFGGDDEPISPLRKRFVDLGIKEGFSAIKIKETPTTNTLTAWEERGSEFGQVLVRDRNLKQVKALDVNMERALGRISNGLYIITSEKNGTKSAMLASWVAQASLQPLGFTVAVAKDRAIEAFMQVGDSFVLNVLEEGNYKDLKKHFLKRLPPGVDRFSGIKTQVAQNGAPILTDSLAYIECEIVDRMECSDHWIVYCHAKEGRVAKNEGLTAVRHRKVGNYY
>NZ_AP018254.1|WP_096622350.1|3211731_3213459_-|flavin-reductase
MTDTISRELRPRDVQVLPIATDTTVLRARSWTRQRFEIEYALGRGTTCNSYVIQGHKTAVIDPPPETVTDIYREALRRCLELETIDYVIIGHFNPNRMASLRFLLEIAPNLTFVTSVMGARYLRQAFANENLSVLEMRGKETLDLGKGHILKFIPTPSPRWIEALCTYDQQTQILYTDKLFSAHVCGDDIFDEDWDKYKQDQRYFYDSVMAPNAPHVKAALEKISDYPVRMYAVGNGPLIRYGLLELTKSYTEWSHSQATREIRVALLYASAYGNTATLAQAFGLGLTKAGVAVDLLNCEFATTDEIRTTLEKADGFIIGSPTIGGHAPTPIHTALGIILALADTSKPAGVFGSYGWSGEAFDLIEGKLKEAGYRLAFPTMRVRFKPSDPILKECEETAIDFAQSLKRARRQRLPQTAASPLEQAVGRIVGSVCIITAKQGDIATAMMGAWISQATFNPPGLTIAIAKDRAIESLMYAGGKLVVNILGEKNHQEYIRHFRKNFAPGEDRFAGFDTSVAANGCTIFNDAIAYLECTVNKRLECGDHWVIYAIVDDGKVLEANELTAIHYRKSGSYY
>NZ_AP018254.1|WP_096622349.1|3211328_3211628_+|30S-ribosomal-protein-PSRP-3
MSKFILKILWLDENVALAVDQVVGKGTSPLTKYFFWPRNDAWEELKKELEAKHWISEMDRVELLNKATEVINYWQEEGRNRPISEAQLKFPEVTFTGSA
>NZ_AP018254.1|WP_096622363.1|3228524_3229193_-|phosphate-signaling-complex-protein-PhoU
MKTPLYNPNSDQPQLARDIRRLEQDILRMGALVEKSCRLSHSALFEQDIQAVAQLPKLDKKIDAFYKQVESDCTSIITRHNPGEQDLRCLSAFMQLVRDLERIGDYAQDLADIAVKLLPYPSHPTLNEVAMMSRHAQAMLACSLEALGDLDETKGRNIKYLDDEVDNAYERVYQSLAQQRDVKGVLEPYILWGLTIRCLERMADHATNIGSRVTYIVTGQRG
>NZ_AP018254.1|WP_157780739.1|3229298_3229445_-|hypothetical-protein
MKRLTQLKRTLSLRNFRPTVATTKIRYLCLSLNMAIIKFPIRHHQQLC
>NZ_AP018254.1|WP_096622365.1|3231415_3232762_-|histidine-kinase
MFVLGLIVGFGIGMGFWVWQQLQLHRYLTLLMQPLPKKLPMGMLMLPQLRQKILLWKHQRHHLHQELQTHQEILENAPIGYLQVDEENQLLWCNQQAREILYLQRWQPEQIRLLLELVRSYELDRLIEQTRDRQKIQVKEWLFHPTYDNPSISPELKDRQLRAIAFPLYNRHVGVFLENLQPQLDVNQARDRAFSDLAHELRTPLTSIRLVVETLQDRISPPLDRWVNRLMYEVDRLIGLVQSWLDLTQLETNPTIQLNRQPLDFYTLIHSVWETLEPLAQKQDIKFSYDGPNPLWINADQTRMYQVFINLLDNCIKYSAPHAQIQVQARMLPEKQMTADMPPHASSLEVNVIDSGAGFSEADLPHIFERFYRGDTARSRHDSLSLPSPSYPSSTSTTNTTTVGSGLGLAIVRQIVLAHGGSIKAMNHPQTGGAWVKIEFPDVMVKSV
>NZ_AP018254.1|WP_096622366.1|3232809_3233562_-|response-regulator-transcription-factor
MYTSELAKYPPTTDFGQVSRVLVVEDEELIREMIVLALEEEGYGVVTANDGRTAVDLLKGGDPNSTDSSFDLVLLDLMLPYINGLDICRLLRHQGNPVPILMLSAKGSETDRVLGLEVGADDYLTKPFSVRELVARCRALLRRQRLSIQPQAPVLQHKEVTLYPQECRVIVRGEEVNLSPKEFRLLEVFMSYARRVWSREQLLDQVWGPDFVGDSKTVDVHIRWLREKLEQDPSNPEYIVTVRGFGYRFG
>NZ_AP018254.1|WP_096622367.1|3234007_3234847_+|hypothetical-protein
MGKTKILLLVVAIACCGKIPSSPSFSVPVIAARVTRWDRLSPSVVEHQLPNQLLLAGVSALGITSLGLLVSVLSGKNRQQLEANLRHTEKLLTNGGNQRFQPIPNNGTNKSTHQDFQVVTRDLVESYHTQALAQATSQYWFSVIAASFGFGIIIYALVGQLHSPQPQIALLHVIPGLAIEGVAVLFLTQADGTRKRATELYDRLRSDEKQLNAIALIESIEDGKLRDIVKAQLALQLVGIVPQIPNFSQSSQISPSKTPPVVDLVEMTEQTMLNENQWK
>NZ_AP018254.1|WP_096622368.1|3235150_3235732_-|hypothetical-protein
MFRKVVLPALIVSGSFLAAFATLIATQGPKLVEVRSDNEQIFNGRVSDVFTPAMGVLLSAGVGLAAWTAIGCGYSLKKSSQLENEVSKLQKLIAEREQQIQALKVEPSSPMMSQLKWFMDEEPSQPTVLADTTIPTPHEPIPEVEAPSEPVGTTTPGFEYEVIRDSKPVVQSAAFAFPSAQTGLGLAYKQKTK
>NZ_AP018254.1|WP_096622371.1|3236423_3237020_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MNDQQLKVWLRFLKALADESRLKILGILANQECSVEELATLLNLKEPTVSHHLTKLKQLDLVKMQVEGNVHLYQINLETLQAFGREIFTLEKMASLVQDLNTEVWDIKVLKAVIEGDFDNPDAVIRLREIPTNRQKRLVVLKWLVCHLEVGVSYTETEIDEFIQRFHPDYVTLRQELLGLQLLVRDNGNYMRSPQFLP
>NZ_AP018254.1|WP_096622373.1|3238055_3239144_+|3-isopropylmalate-dehydrogenase
MAAQYRITILPGDGIGPEIMAVAVDVLKAIGKKCAIEFTFTEALIGGAAIDATGEPLPEKTLQECRQSDAVLLAAIGGYKWDSLPPQQRPEAGLLGLRAGLELFANLRPAKILPQLIDASSLKKEVVEGVDIMVVRELTGGIYFGKPRGIFSDESGVRRGVNTMVYSEAEIDRIGRVAFETARKRRGKLCSVDKANVLDVSQLWRDRMTKLSIEYPDVELSHLYVDNAAMQLLRAPKQFDTIVTGNLFGDILSDAAAMLTGSIGMLPSASLGASGPGLYEPVHGSAPDIAGQDKANPLAQVLSAAMMLRYSLNQPAAADLIEASVSQVLQSGFRTGDIMATGMTQLGCRGMGDALLQAIAAM
>NZ_AP018254.1|WP_096622374.1|3239578_3239839_+|hypothetical-protein
MYAYRQEQNEFTKVRPQAALIDPAVIRAAGQIYHTYCEVHPEITGQATGVAIKRTNLRGKVIFIENPALLPDECFIPLSQIESYVY
>NZ_AP018254.1|WP_096626169.1|3239952_3240771_+|prepilin-peptidase
MDMVVFIPASAIAFVVGAAVGSFLNVVVYRLPAGLSLLHPPSRCPQCFTPLKPHDNVPVLGWLWLKGRCRYCKTRISPRYPVVEFTTGIVFLLVFGNFQFSLSTLGYWVFCSWLIALALIDADTMTLPNPLTASGVILGIGFKLIEGWQQGGWSPAVNSLFAAIFASVIGIWLFDTIRILGSVAFGKTAMGGGDAKLAAMMGAWLGWQNLLLASFIACLLGAVVGGIMLSRTSQKSNSMLKIPFGPYLAIGAILAMFFGETFISNYLNLFSV

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Crispr_ID: NZ_AP018254_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_34

3488923-3489051

Orphan

Consensus_repeat	Method
ATAAGGGTAATCCAAAATCCATAATCCAAAATCCAAAATC	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_AP018254_34

>merge|NZ_AP018254|34|3488923-3489051|CRISPRCasFinder
ATCCAGGATAAGGGTAATCCAAAATCCATAATCCAAAATCCAAAATCATAATATGCAGCGATATTATTCACCTTCTGCACTGTAACCCAACAATCAATTTCCCATAAGGGTAATCCAAAATCCAAAATC

>NZ_AP018254|34|32|3488923-3489051|CRISPRCasFinder
ATCCAGGATAAGGGTAATCCAAAATCCATAATCCAAAATC	CAAAATCATAATATGCAGCGATATTATTCACCTTCTGCACTGTAACCCA
ACAATCAATTTCCCATAAGGGTAATCCAAAATCCAAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096622578.1\|3491565_3492186_+\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018254.1\|WP_172892835.1\|3484019_3484388_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|240237
NZ_AP018254.1\|WP_096622574.1\|3485884_3486724_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293816
NZ_AP018254.1\|WP_157780751.1\|3482205_3482361_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622576.1\|3489066_3489954_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622577.1\|3490067_3490577_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626223.1\|3487351_3488773_+\|competence-protein-ComE	unknown	unknown	gnl\|CDD\|197270
NZ_AP018254.1\|WP_096622570.1\|3479428_3480682_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380571
NZ_AP018254.1\|WP_096622582.1\|3495743_3495956_-\|RNA-binding-protein-hfq	unknown	unknown	gnl\|CDD\|212463
NZ_AP018254.1\|WP_096622572.1\|3482337_3483528_-\|phosphoserine-transaminase	unknown	unknown	gnl\|CDD\|235103
NZ_AP018254.1\|WP_096622583.1\|3496090_3496930_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_AP018254.1\|WP_096622579.1\|3492417_3494181_-\|7-cyano-7-deazaguanine-synthase	unknown	unknown	gnl\|CDD\|238949
NZ_AP018254.1\|WP_096622580.1\|3494446_3494911_-\|DUF4332-domain-containing-protein	unknown	unknown	gnl\|CDD\|372972
NZ_AP018254.1\|WP_096622584.1\|3497155_3498136_+\|ATPase	unknown	unknown	gnl\|CDD\|225518
NZ_AP018254.1\|WP_096626225.1\|3490790_3491369_+\|M67-family-metallopeptidase	unknown	unknown	gnl\|CDD\|163701
NZ_AP018254.1\|WP_096622573.1\|3484899_3485904_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_AP018254.1\|WP_096622569.1\|3478320_3479166_+\|S-formylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|131868
NZ_AP018254.1\|WP_096622581.1\|3495071_3495578_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_AP018254.1\|WP_096622571.1\|3481119_3482157_-\|isochorismatase	unknown	unknown	gnl\|CDD\|238493
NZ_AP018254.1\|WP_096622568.1\|3476896_3478072_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226925

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_172892835.1\|3484019_3484388_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|240237	PTZ00038, PTZ00038, ferredoxin; Provisional.	2.66305e-27
NZ_AP018254.1\|WP_096622574.1\|3485884_3486724_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293816	cd07730, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. Some members of this subgroup are annotated as GumP protein.	7.14419e-81
NZ_AP018254.1\|WP_096626223.1\|3487351_3488773_+\|competence-protein-ComE	gnl\|CDD\|197270	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium. Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins, which show high sequence homology to the endonuclease from Salmonella typhimurium and vertebrate phospholipase D6. Nuc and PLD6 belong to the phospholipase D (PLD) superfamily. They contain a short conserved sequence motif, the HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), which characterizes the PLD superfamily and is essential for catalysis. Nuc and PLD6 utilize a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit. However, proteins in this subfamily have two HKD motifs in a single polypeptide chain.	9.58286e-48
NZ_AP018254.1\|WP_096622570.1\|3479428_3480682_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380571	cd06348, PBP1_ABC_HAAT-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids or peptides. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in the uptake of amino acids or peptides. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	5.7835e-138
NZ_AP018254.1\|WP_096622582.1\|3495743_3495956_-\|RNA-binding-protein-hfq	gnl\|CDD\|212463	cd01716, Hfq, bacterial Hfq-like. Hfq, an abundant, ubiquitous RNA-binding protein, functions as a pleiotropic regulator of RNA metabolism in prokaryotes, required for transcription of some transcripts and degradation of others. Hfq binds small RNA molecules called riboregulators that modulate the stability or translation efficiency of RNA transcripts. Hfq binds preferentially to unstructured A/U-rich RNA sequences and is similar to the eukaryotic Sm proteins in both sequence and structure. Hfq forms a homo-hexameric ring similar to the heptameric ring of the Sm proteins.	1.17514e-08
NZ_AP018254.1\|WP_096622572.1\|3482337_3483528_-\|phosphoserine-transaminase	gnl\|CDD\|235103	PRK03080, PRK03080, phosphoserine transaminase.	0
NZ_AP018254.1\|WP_096622583.1\|3496090_3496930_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	2.62898e-154
NZ_AP018254.1\|WP_096622579.1\|3492417_3494181_-\|7-cyano-7-deazaguanine-synthase	gnl\|CDD\|238949	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .	1.68155e-70
NZ_AP018254.1\|WP_096622580.1\|3494446_3494911_-\|DUF4332-domain-containing-protein	gnl\|CDD\|372972	pfam14229, DUF4332, Domain of unknown function (DUF4332). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 134 and 356 amino acids in length. This domain contains helix-hairpin-helix motifs.	1.42821e-35
NZ_AP018254.1\|WP_096622584.1\|3497155_3498136_+\|ATPase	gnl\|CDD\|225518	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism].	1.02366e-65
NZ_AP018254.1\|WP_096626225.1\|3490790_3491369_+\|M67-family-metallopeptidase	gnl\|CDD\|163701	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding). This family contains archaeal and bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	5.11483e-36
NZ_AP018254.1\|WP_096622573.1\|3484899_3485904_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	3.43455e-60
NZ_AP018254.1\|WP_096622569.1\|3478320_3479166_+\|S-formylglutathione-hydrolase	gnl\|CDD\|131868	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. [Cellular processes, Detoxification].	2.03195e-167
NZ_AP018254.1\|WP_096622581.1\|3495071_3495578_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	6.6474e-15
NZ_AP018254.1\|WP_096622571.1\|3481119_3482157_-\|isochorismatase	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	0.000198178
NZ_AP018254.1\|WP_096622568.1\|3476896_3478072_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	1.87162e-78

>NZ_AP018254.1|WP_096626223.1|3487351_3488773_+|competence-protein-ComE
MTTILVGCQAAKSNIQREKSLPQDKFIQVYFNHSAASQYQDPYRKKTRLGDDLEQQIINTINRAEKTIDIAVQELRLPRIAQALVDKQKQGVKIRVILENNYSRPASSFSLAEIKKMPERERTRYQEYRHFIDINKDGKLSQGEINQRDALVIIANAKIPGIDDTGDGSKGSGLMHHKFVVVDNRFVVVTSANFTMSDVHGDYGKPGNSSSKAANLNSQSLGNANNLVIIDNVEVADIFRQEFDLMWGTGIRGNYKSKFGLQKPFRPPQTIQVGNNVVTINFSPISPTQPWESSSNGLIARKLEKANKSIDLALFVFSEQRLADSLQYKHQQNVRIRALFEPSFAFRYYSEALDLLGVARSHKCQYEPDNRPWSTPATVAIPQLARGDLLHHKFAVIDNQTVITGSHNWSAAANHNNDETVVIMKNPVVAAHFSQEIERLYGNSKPGLPDKVKARIAAEKQKCPQIQRVGSRE
>NZ_AP018254.1|WP_096622574.1|3485884_3486724_+|MBL-fold-metallo-hydrolase
MLPVPVKFFQAGYCTHPEAIVMRGGKWKIANFPAIFALIIHPQQGAILYDTGYSQRFFEETRTFPNRLYAMITPVYLQPGENPASQLEKYGIKPTEIKYIIISHFHADHVGGLWEFPNAQFMCFQSAYNAVKNLRGWNAVKAGFLPGLIPDNFPERVIYVEDTKNIQLPPDFSPFITGFDIFADNSLIAVELPGHATGQLGLILTDTHHQKYFLIADACWLSRAYQEFIQPQKIATILFADSQQYTDTLYKLHILHQNNPHLKIMPTHCAESWKQFGLI
>NZ_AP018254.1|WP_096622573.1|3484899_3485904_+|NAD(P)-dependent-oxidoreductase
MNIVVTGGTGFLGEKLAQRLVKNGSNVTVIGRNQNIGKYLQSQGIRFLKTNLEDQQAVISACKNADYIFHCGALSSPWGRYIDFYHANILGTRHIIQACQTHAIKRLIYVSTPSVYFDFSHRLNIKETDYLTSKPANHYVATKLIAEQEITKAHQQGLPVISIRPRAIFGPGDTTILPRLLKANFRTGIPLINQGQALIDMTYVENVVDALLLCQSAPNHLLGRIFNITNGQPMYLLDLLAMLAQKLECQLKLKKLNYHFAYSLAQVMEILSKSLLNHREPILTRYTVGVLSFSQTLDITSAKVELGYQPRIDIEQGLNSFCQWWKSQNASCSS
>NZ_AP018254.1|WP_172892835.1|3484019_3484388_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MSPMHTVTVRDRARNIEHTFQVPEDRYILHTAENNGKELPFSCRNGACTTCAVRVLSGEIYQPEAIGLSPELRQKGYALLCVSYARSDLVVETQDEDEVYELQFGRFFAKGKVRAGLPLDED
>NZ_AP018254.1|WP_096622572.1|3482337_3483528_-|phosphoserine-transaminase
MTDKLTPPTKKPNNPHFSSGPCAKRPGWTVDALANACVGRSHRSPAGRAKLAEVIDRSQQILGVPQDYRLGIVPASDTGAVEMAMWSLLGKLPLDILAWESFGQEWVQDVVEELKLQNTRVLQADYGGLPDLSTVNFDHDVVFLWNGTTSGVRVPNGDWIPEQRGGLTICDATSAVFAMDIPWSKLDVVTYSWQKVLGGEAQHGVIVLSPRAVERLETYTPERPIPKIFRLTKKGKLIEGIFKGDTINTPSMLCVEDALDSLNWAESIGGLTGLINRSEANLSVISKWVETSDWADFLAETPQTRSCTSICLKIIDPWFQSLAPEKQAEYAKKLSSLLEKQQVAFDIASYRSAPPGLRIWGGATVETSDIEALLPWLDWGYATVKSEYTSAVLASS
>NZ_AP018254.1|WP_157780751.1|3482205_3482361_+|hypothetical-protein
MGRLDNPMGRLDNPMGRLDNPMGRLDNPMGRLDNPMGRLYYIRLLARCKDC
>NZ_AP018254.1|WP_096622571.1|3481119_3482157_-|isochorismatase
MTISANLLPIPDFFDPTRVDQVWRVPYQERAKQAQEWAKIHGIKPASEDTTRVCLLAIDVQNTFCIPDFELFVGGRSGFGAVEDNIRLCQFIYRHLSVITEIIPTLDTHTSMQIFHPIFWVNNAGENPPPMTMITLADVQQGLWKVNPGVAYSLSGGDYASLESFALHYVQRLHDAGKYPLTIWPYHSMLGGIGHGLVAAVEEACFFHAIARCSQTRFEVKGGNPLTENYSVLRPEVLDDASGRAIASKNSNLIGKLLQFDVIIIAGQAKSHCVAWTVDDLLTEIQAVDPQLAKKVYLLEDCTSPVVVPGVVDFTEQANSTFQRFADAGMHLVKSSGSVSSWGGS
>NZ_AP018254.1|WP_096622570.1|3479428_3480682_-|ABC-transporter-substrate-binding-protein
MFKKYIFGIALATATGFIIAGCGGETASNSNSNQSPNTGDVSSNTNNSAGNVAGAIPIGIAFAQTSNVALLGQEGVAGAKIAEKYFNDKGGVNGTPIRLVFQDTGGDEAGAINAFQTLINKDKVVGIVGPTLSQQGFSAHPIAERAKTPAIAASNTAKGIPEVGDYIARVSAPVSTVAPNSLKAALKQNPNIKKVAVFFAQNDAFNKSETEIFQQNVKDLGLELVTVQKFQTTDTDFQAQATNALKFKPDLVIISGLAADGGNLVRQLRELGYKGAIVGGNGLNTSNVFKVCKALCDGVMIAQAYSPEHPGAINQAFRQAYLQQFKSEPPQFSAQAFTAVQVYVEALKALDKKTKISNLQLPQLRSELNKQILAGKYDTPIGEISFTPIGEIVQKDFYVAQIKMNPDGNTGKFAFIK
>NZ_AP018254.1|WP_096622569.1|3478320_3479166_+|S-formylglutathione-hydrolase
MVLEQIAEYKSFAGKLGFYSHQSQECQTKMRFAIYLPPQAQTQTLPVIYFLSGLTCSEENFMVKAGAQQLAAKYGIILVTPDTSPRDTGIAGEDLSWDFGTGASFYVDATQTPWLHHYRMYSYVVEELPALIANNFPVQTEKQSIFGHSMGGHGALVCAMRNPEKYKSVSAFAPIVSPMRCPWGEKAFSGYLGENRETWRIYDACELVKEVGYPRPILIDQGTADKFLETQLKPELFAQACQQVKQPLQLRYQEGYDHSYYFIATFIDDHLRFHAEALGCL
>NZ_AP018254.1|WP_096622568.1|3476896_3478072_+|GNAT-family-N-acetyltransferase
MSLTLRYGELSHHKDIEKLGEILDQCFISFAGRGESYIHRMGVERCRIIRTGEEIIGGLAIIPLGQWWGNNCVEMGGIAVVGIAPAYRGQGAARVLMQESVKEMYARGMGISVLFPATQYFYRQIGYGEAGIVCQWEIKSSQIPLLPQILPFERVAVDELDLFTKLYSQQTRLYNGYVQRDRFLWGEKIRTEEDTVYAYVIGGREQPQGYIIYTQYSSGGENILRIRDWVLLNQDAITSFWAFLAKMRSQITKVRWSDAGITAIAYGLPEQHQQLHDAAKWMMRIVNVVKALEKRGYPPGLTAELHLQLKDDLIAENNGNFLLQINHGQAKVEKGGNGDLELDIRTLAPIYTGLFAPVQLQFIGQLTGSGNAISTATQIFAGTVPTISDYF
>NZ_AP018254.1|WP_096622576.1|3489066_3489954_-|hypothetical-protein
MSKPIFQLVDELPTSGLTVSLLNSLDFIAPGQWKNTVGFVNTIKTVTGESDEALIQQIGERAITLYNDKSQGYQTAMWLYQTVDSTDKALAAAALANKIGESISFLGFLNKVTPKADKAQTIDLTLKLVAELVAFCKINGIPGDSIGDFVAALGEYSSEALIRMAALVCFDGLIPLGPDFIRKATDVIGGLTPQELEQNSTFSSMRDEIPGNNSAGKLDFIGQSFDSVKGWMGGLVTTHNLTPDKVLGNIRKFVDITDDKLDYLAAFIDVSTNYYEHTGTQSLARRLIERAMAEI
>NZ_AP018254.1|WP_096622577.1|3490067_3490577_-|hypothetical-protein
MIFPRIRRVMVALLLSLVLFTTACATQAPGRFDQVQQETQRGVQAVDKSATQGGSFNKYFPNSQSGFERVFTQEKKGFAQANLKKDGKVVAQLSVSDTSSVPTAAAKYANSDKKIAGYPAVQTGNTQTSILVGNRYQVTARSVDPSFTASDRAEWLGKFNLSGIANLKS
>NZ_AP018254.1|WP_096626225.1|3490790_3491369_+|M67-family-metallopeptidase
MAICLTQEQIEQIYQHGCVSYPFECCGIILGSINYETSEPEKIAVELIPTENVWNAENAVIFGENGENSPRRRYAIAPQVMLNTQKNARDRSLDIIGIYHSHPDYSAIPSEFDRRYAWSGYSYIIVAITNSDVNFYQSLMKVCKQPNNKIVHSYPLLPIFSEKSGVFPHTINIHSWCLDENQQFHPEPIIIK
>NZ_AP018254.1|WP_096622578.1|3491565_3492186_+|hypothetical-protein
MSKPKILQEGQNYTFRSYFELPYETEDILAELGYSFSRARMNLPFSQHTPQRLPELRQQIEDLLPLVTLSSETARREILVAPVLAEVTRFCKCQMRVEYPLQVNSQLKGNLDYLLRNTHTETGKTFLVIEAKNDDLSRGFTQLAVELIALATAEEQDILYGAVTVGDTWRFGLLEQQKLHITQDITLYRVPDDLDVLMQILIGIIE
>NZ_AP018254.1|WP_096622579.1|3492417_3494181_-|7-cyano-7-deazaguanine-synthase
MNINHELLNFINPKSRIQNLKSHESVFSQSWRVAWGKIHTLTSRLLTDVVWQDGEFAVISPPGQQIFRLSPREDFVVVGDIWLTNQGELLAKLGLIPEEFDGDDLDLVGRLWERWGRECLQLLVGMFSLVIWERRQQRLWMIRDRVGAKTLYYTRHGAVQWIAPQLPSLSAYRSSELDLVALRDYLCCAFVPGERTLWQDVKEVRPGTAVLSPATEVYIYWQLQENISNQESLEWHGESLRGLLNQVVQEYLPTNQPVGVFLSGGLDSSCITALAAKFHSHPVHTYSIHFGAELPNELEFSSLVAQHCQTQHHILEITFADMWNYLPQVMLHLDDPIGDPLTVPNLLLGKLAKNHVEVILNGEGGDPCFGGPKNQPMLINSLYGGVTNQDGLAAYLTSFKKCADDLPQLLKPDVYHAVGEEKSVFAPDFNVNMNYLNRLMGLNIKYKGADQILTKVNNLTSAVGLTGRSPLFDQRVVDLSMTIPPIYKLSGVEEKAVLKQAVKDILPPSIIHRPKSGMMVPVQLGFRKYWQQQARKMLLHKKSAIAPYFQQQVIQDWLNYRGDIWGRYGVKLWLLTSLEVWLQVHQG
>NZ_AP018254.1|WP_096622580.1|3494446_3494911_-|DUF4332-domain-containing-protein
MSFPIKASTRKIKSCYWPVSELPGLSSDELSLLENAGIQSTQELLQLTSTSANQIKLAQKLQIHLQHLSKWVALSDLARVQSVGTQYCGLILHAGITNCVHLANAPVSNLHKQVMRLYVSMMQRRDLCPGIDLVQQWTQQAQMLIMGEKGKSGN
>NZ_AP018254.1|WP_096622581.1|3495071_3495578_+|pentapeptide-repeat-containing-protein
MKKLLSRFLGLIIIIYLAWLLVLLSATPAYAQVNTINYNSTSLENRDFSNLDLHGVTFVAAEMRGIDFHGSNLTNAILTKGVLLKANLEGANLTGALVDRVTLDGANLKNAIFQEATLTRSRFFDADITGADFTDALIDRYQVKLMCDRADGINPVTGVATRDSLGCP
>NZ_AP018254.1|WP_096622582.1|3495743_3495956_-|RNA-binding-protein-hfq
MLTEFDTSLPSTRQIQTLIKEAGVIEMKLITGDLICGKVLWQDPQCMLVLNDSNERITIWKQAIAFLKTK
>NZ_AP018254.1|WP_096622583.1|3496090_3496930_+|diaminopimelate-epimerase
MAINFTKYHGLGNDFILIDNRQHPLPIITSDQAAQLCDRNFGIGADGVIFVLPGQDGTDYTMRIFNSDGSEPEMCGNGIRCLAAFIADLEGMERQTDTYRIHTLAGVITPQLMPDGQVRVDMGEPRLLAAEIPTNLGDKNDKVVEHPLQIDGKTWEVTCVSMGNPHCITFVDDVAAIPLADLGPKFEHHPAFPQRTNTEFIQIVDRDYMKMRVWERGAGATLACGTGACASLVAAVLTGRSDRIATVELPGGNLLIEWSNIDQRVYMTGPAERVFVGTV
>NZ_AP018254.1|WP_096622584.1|3497155_3498136_+|ATPase
MTLHVIGIDGGASKTVCVLVNQQREILGRGVSGGANYQSIGIDATLRAIHGAICASLTDVENIQIGGICLGLAGMGRPDDVDLLRTRFLDSLQSPELKNFLSAKNIAIASPTPEGLLITHDGLISLVGGIGHDVGVVVAAGTGSITFGRNGRGETKRVGGWGYLLGDEGSAYHIAIAALQAVIKSYDGRGEQTALLAAFQNHLHLTTMEDLVRVIYRQGWGVKEIASLAPIVDQLAATGDPVAQQIIENSVAELVLATGTVINCLFTDVSSVQHQIPVVTTGSVWKGKSQLRPHFISQLQSQFPHVNVILPQNEPAYGAALLALGI

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Crispr_ID: NZ_AP018254_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_35

3552245-3552991

Orphan

Consensus_repeat	Method
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CRISPRCasFinder
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CRT

9 spacers

The CRISPR arrays of NZ_AP018254_35

>merge|NZ_AP018254|35|3552245-3552991|CRISPRCasFinder,PILER-CR,CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACGCTAAATATTTAAGCGTATACGAAGTCATGTTGGCGAAAATCTTATCGTGCTGACCAGCCAAATGTAGAGTATCCACTAGTTGTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTAAATCGTTGAAATAACTGGTTACATGAGACTTAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCCCATGTGCTCGCACCAGATGCGGGCCACGAGCGCGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACATCCTAATCCTGTGCCTGTAGTTCTGGTAGTAAAGAACGGGTCGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTTTTAAGTTTGGCGCTGATTGGATTGTCAGCAGATGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTGAGAAGGATCCATCCCTTATGGAATCGAAGTAGAGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACTTGAAGAGCAGAGTATATCTCTTTCTTTTGCGGAGATATAATTGTGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACCTTGCACAGGAAGGCGAAATATCCGCCATTATCAAGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAACAGCTTATTGCTTCCCTGCTTCTCCCCTTCAAGACCCGGTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|35|33|3552245-3552991|CRISPRCasFinder
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	GCTAAATATTTAAGCGTATACGAAGTCATGTTGGCGAAAATCTTATCGTGCTGACCAGCCAAATGTAGAGTATCCACTAGTTGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTAAATCGTTGAAATAACTGGTTACATGAGACTTAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCATGTGCTCGCACCAGATGCGGGCCACGAGCGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATCCTAATCCTGTGCCTGTAGTTCTGGTAGTAAAGAACGGGTC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTTAAGTTTGGCGCTGATTGGATTGTCAGCAGATG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGAGAAGGATCCATCCCTTATGGAATCGAAGTAGAG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTGAAGAGCAGAGTATATCTCTTTCTTTTGCGGAGATATAATTGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGCACAGGAAGGCGAAATATCCGCCATTATCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AGCTTATTGCTTCCCTGCTTCTCCCCTTCAAGACCCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|35|9|3552365-3552991|PILER-CR
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTAAATCGTTGAAATAACTGGTTACATGAGACTTAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCATGTGCTCGCACCAGATGCGGGCCACGAGCGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATCCTAATCCTGTGCCTGTAGTTCTGGTAGTAAAGAACGGGTC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTTAAGTTTGGCGCTGATTGGATTGTCAGCAGATG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGAGAAGGATCCATCCCTTATGGAATCGAAGTAGAG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTGAAGAGCAGAGTATATCTCTTTCTTTTGCGGAGATATAATTGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGCACAGGAAGGCGAAATATCCGCCATTATCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AGCTTATTGCTTCCCTGCTTCTCCCCTTCAAGACCCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

>NZ_AP018254|35|6|3552365-3552991|CRT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTAAATCGTTGAAATAACTGGTTACATGAGACTTAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CCCATGTGCTCGCACCAGATGCGGGCCACGAGCGC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	ATCCTAATCCTGTGCCTGTAGTTCTGGTAGTAAAGAACGGGTC
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTTTAAGTTTGGCGCTGATTGGATTGTCAGCAGATG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TGAGAAGGATCCATCCCTTATGGAATCGAAGTAGAG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	TTGAAGAGCAGAGTATATCTCTTTCTTTTGCGGAGATATAATTGT
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	CTTGCACAGGAAGGCGAAATATCCGCCATTATCAA
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC	AGCTTATTGCTTCCCTGCTTCTCCCCTTCAAGACCCG
GTCTCCTCTTATGAGGGGAAATAATTGATTGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096622628.1\|3562319_3563135_-\|MlaE-family-lipid-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|215575
NZ_AP018254.1\|WP_096622621.1\|3555895_3558310_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277335
NZ_AP018254.1\|WP_096622623.1\|3559540_3560071_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018254.1\|WP_096622616.1\|3549574_3550075_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622614.1\|3547076_3547661_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096622613.1\|3546284_3546869_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096622615.1\|3547856_3548888_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622626.1\|3561557_3561914_-\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|214352
NZ_AP018254.1\|WP_096622619.1\|3551740_3551875_-\|photosystem-I-protein-PsaX	unknown	unknown	gnl\|CDD\|369686
NZ_AP018254.1\|WP_157780755.1\|3561251_3561491_-\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|319798
NZ_AP018254.1\|WP_096622620.1\|3554876_3555794_+\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212519
NZ_AP018254.1\|WP_096622627.1\|3562079_3562277_-\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NZ_AP018254.1\|WP_096622622.1\|3558490_3559387_-\|prohibitin-family-protein	unknown	unknown	gnl\|CDD\|259799
NZ_AP018254.1\|WP_157780754.1\|3544296_3544467_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626231.1\|3553403_3554597_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_AP018254.1\|WP_096622617.1\|3550100_3550514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622618.1\|3550766_3551648_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|237261
NZ_AP018254.1\|WP_096622611.1\|3544663_3545173_+\|allophycocyanin-subunit-beta	unknown	unknown	gnl\|CDD\|271281
NZ_AP018254.1\|WP_096622624.1\|3560241_3561066_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270221
NZ_AP018254.1\|WP_096622612.1\|3545385_3546189_+\|peptidoglycan-editing-factor-PgeF	unknown	unknown	gnl\|CDD\|224413

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096622628.1\|3562319_3563135_-\|MlaE-family-lipid-ABC-transporter-permease-subunit	gnl\|CDD\|215575	PLN03100, PLN03100, Permease subunit of ER-derived-lipid transporter; Provisional.	8.21159e-85
NZ_AP018254.1\|WP_096622621.1\|3555895_3558310_+\|hypothetical-protein	gnl\|CDD\|277335	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.08319e-09
NZ_AP018254.1\|WP_096622623.1\|3559540_3560071_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.79952e-15
NZ_AP018254.1\|WP_096622614.1\|3547076_3547661_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	8.60938e-46
NZ_AP018254.1\|WP_096622613.1\|3546284_3546869_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	8.11474e-46
NZ_AP018254.1\|WP_096622627.1\|3562079_3562277_-\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	6.82364e-23
NZ_AP018254.1\|WP_096622626.1\|3561557_3561914_-\|50S-ribosomal-protein-L20	gnl\|CDD\|214352	CHL00068, rpl20, ribosomal protein L20.	4.65528e-62
NZ_AP018254.1\|WP_096622619.1\|3551740_3551875_-\|photosystem-I-protein-PsaX	gnl\|CDD\|369686	pfam08078, PsaX, PsaX family. This family consists of the PsaX family of photosystem I (PSI) protein subunits. PSI is a large multi-subunit pigment protein complex embedded in the thylakoid membranes of green plants and cyanobacteria. PsaX is one of the 12 protein subunits found in PSI and these subunits are arranged as monomers or trimers within the membrane as shown by the structure of the trimeric complex from Synechococcus elongatus.	2.62714e-10
NZ_AP018254.1\|WP_157780755.1\|3561251_3561491_-\|HAD-hydrolase-like-protein	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.26451e-29
NZ_AP018254.1\|WP_096622620.1\|3554876_3555794_+\|histone-deacetylase	gnl\|CDD\|212519	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11. Class IV histone deacetylases (HDAC11; EC 3.5.1.98) are predicted Zn-dependent enzymes. This class includes animal HDAC11, plant HDA2 and related bacterial deacetylases. Enzymes in this subfamily participate in regulation of a number of different processes through protein modification (deacetylation). They catalyze hydrolysis of N(6)-acetyl-lysine of histones (or other proteins) to yield a deacetylated proteins. Histone deacetylases often act as members of large multi-protein complexes such as mSin3A or SMRT/N-CoR. Human HDAC11 does not associate with them but can interact with HDAC6 in vivo. It has been suggested that HDAC11 and HDAC6 may use non-histone proteins as their substrates and play a role other than to directly modulate chromatin structure. In normal tissues, expression of HDAC11 is limited to kidney, heart, brain, skeletal muscle and testis, suggesting that its function might be tissue-specific. In mammals, HDAC11 proteins are known to be involved in progression of various tumors. HDAC11 plays an essential role in regulating OX40 ligand (OX40L) expression in Hodgkin lymphoma (HL); selective inhibition of HDAC11 expression significantly up-regulates OX40L and induces apoptosis in HL cell lines. Thus, inhibition of HDAC11 could be a therapeutic drug option for antitumor immune response in HL patients.	1.09191e-150
NZ_AP018254.1\|WP_096622622.1\|3558490_3559387_-\|prohibitin-family-protein	gnl\|CDD\|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.4453e-65
NZ_AP018254.1\|WP_096622612.1\|3545385_3546189_+\|peptidoglycan-editing-factor-PgeF	gnl\|CDD\|224413	COG1496, yfiH, Multicopper polyphenol oxidase (laccase) [Secondary metabolites biosynthesis, transport and catabolism].	4.12616e-56
NZ_AP018254.1\|WP_096626231.1\|3553403_3554597_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.11762e-67
NZ_AP018254.1\|WP_096622618.1\|3550766_3551648_+\|lipoyl-synthase	gnl\|CDD\|237261	PRK12928, PRK12928, lipoyl synthase; Provisional.	0
NZ_AP018254.1\|WP_096622611.1\|3544663_3545173_+\|allophycocyanin-subunit-beta	gnl\|CDD\|271281	cd12126, APC_beta, Allophycocyanin beta subunit of the phycobilisome core. Phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	1.53286e-97
NZ_AP018254.1\|WP_096622624.1\|3560241_3561066_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270221	cd01000, PBP2_Cys_DEBP_like, Substrate-binding domain of cysteine- and aspartate/glutamate-binding proteins; the type 2 periplasmic-binding protein fold. This family comprises of the periplasmic-binding protein component of ABC transporters specific for cysteine and carboxylic amino acids, as well as their closely related proteins. The cysteine and aspartate-glutamate binding domains belong to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.44393e-71

>NZ_AP018254.1|WP_096622619.1|3551740_3551875_-|photosystem-I-protein-PsaX
MSKVGVDVPQSGAKPPFTFRTTVAIALLAVNILVAAMYHHVINP
>NZ_AP018254.1|WP_096622618.1|3550766_3551648_+|lipoyl-synthase
MTSTHRTQLQTEIQAMPSWLRRPIGKASELSTVQKIIKQRQIHTICEEGRCPNRGECYAQKTATFLLMGPTCTRSCAFCQVDKGHAPMPIDEDEPIKVAESVQLLGLKYVVLTSVARDDLADGGASHFVRTMQKIREWNPGTQIEVLTPDFYGKRDAIAVIVKAEPACYNHNIETVRRLTPPVRRGAKYDRSLQVLRMVKEINPNIPTKSGLMVGHGETVEEIIEAMQDLRSVKCDRLTIGQYMRPSLEHLPVQKYWTPTEFDELGAIAKQMGFSHVRSGPLVRSSYHAGEED
>NZ_AP018254.1|WP_096622617.1|3550100_3550514_-|hypothetical-protein
MGQYERLILMAEDELTEYSTDARKIEKLRRKIGLSVSPEEQKQVKETLLAKIPQDPISKLVENQRQTVALPFWGIAGLGLLLGISFMQPLDFIATVLGGGIAIALQKWGWRLQAQRLILQTLEDIEKRTQHPNSTNN
>NZ_AP018254.1|WP_096622616.1|3549574_3550075_+|hypothetical-protein
MNYLVAVLPDRIQAEAASVALEKQNINSTILGKGYKSADEFGLIDPKEQARKQAILMAIWLVPFGFFAGFGFSLVTGLDTFAWAGEIGNHVIGGLLGAIGGGMGSVFVGGGVGLVVGGGDALPYRNRINAGKYLVVVQGSESITREATKILRGFDPENLQGYATND
>NZ_AP018254.1|WP_096622615.1|3547856_3548888_+|hypothetical-protein
MTIKKSLLVTGLLCTIFGTGIEPVITSASANPGITIAQNQRQNTKPTELRRRLRTRSLSPQPSPSTTVKLITPGIQPRQQLRFSPKVGQKETADMEMNMDMSMSLNGNSAPSVKIPGTKIQLNAVVNQVQPNGDFQYEFTYSNVDVVGESDLPPAILESMRGEMKKMEGFKGTAIVDSMGRTKKANFTVPPNFDPSLKQMMDQMASSIEQMSAQVPQEAIGKGAKWQVTSQVSMNGINIEQTATYELVDIQDGVVTMNVSFAQQIPGAQKMILPQMPPGMTMTLQSYNATGTGQTKISLGRIMPLSTSINMKTTAQMQAISPDLKEPMVMDQEMSMRMRIESK
>NZ_AP018254.1|WP_096622614.1|3547076_3547661_+|Uma2-family-endonuclease
MFSPPIVLQMPDNLQMSDEEFYQFCQINRHYRIERDRKGEISIMPPTGGETGNRNFNVALQLGIWSEADGTGICFDSSTGFILSTGAERSPDAAWMSLERWNSLTPEQQEKFPPLCPDFVVELRSASDKLKPLQEKMQEYIQEPGVKLGWLIDRKHRRVYIYRPGMDVECLENPATVSGEPVLPGFVLNMAKIW
>NZ_AP018254.1|WP_096622613.1|3546284_3546869_+|Uma2-family-endonuclease
MFSPPIVLQMPDNLRMSDEEFYQFCQINRHYRIERDRKGEISIMPPTGGETGNRNFNLSGQLWVWSEADGTGICFDSSTGFILSTGAERSPDAAWMSLERWNSLTPEQQEKFPPLCPDFVVELRSASDKLKPLQEKMQEYIQEPGVKLGWLIDRKHRRVYIYRPGMDVECLENPATVSGEPVLPGFVLNMAKIW
>NZ_AP018254.1|WP_096622612.1|3545385_3546189_+|peptidoglycan-editing-factor-PgeF
MHTWHWRTWENKPYLACSILEKFPHGFFTQHFWQSPPQELTKAFASSMKAYRLKQVHGNRVLTPQQIHENLENGGEHVDDELDPPLVMGDGVMSDASVEGQSVWVASADCTPALIGDIQTGQVTAIHAGWRGTAQKIIPVAIAMMQNHGSRLQDLRIALGPAIAGEVYQVSLETAMEVGATICPAKEPEEMMGMLMDGENPPLLPDPEVGKVRLDVRRINAMQMENMGISPEQIAIAPYCTYQNPEHFFSYRRQREKKVQWSGIASI
>NZ_AP018254.1|WP_096622611.1|3544663_3545173_+|allophycocyanin-subunit-beta
MRDAVTSLIKNYDVAGKYFDRNAIDDLKKYFETGSARVQAAAVVNGNAAAIVKQAGLSLFDELPELIRPGGNAYTTRRYAACLRDMDYYLRYATYAIVAGSMDVLDERVLQGLRETYNSLGVPIAPTVRGIQIMKDIVKSQVEAAGISNSGFVDEPFDYMTRELSETDV
>NZ_AP018254.1|WP_157780754.1|3544296_3544467_+|hypothetical-protein
MVTPYLPIYYHQSVLFKALLTLRGETETLTHLEYPKEKESEIFVTKVTEYQFSQLY
>NZ_AP018254.1|WP_096626231.1|3553403_3554597_+|AI-2E-family-transporter
MNLGQWIGLLAIILSLYTLWQIREALLLAFAAVVLASTLNRLARRFQRMGASRGFAILLAVAIFLGLIVGFFWLIVPPFADQFQELTRKVPQGLQRFNIWLEQLETRIPPQLAPYRPDLNSLIKQAEPWIQSVLGSSLLLVSGSLDVLLKTLLVLVLTGMFLVDPQQYRKLLIRLFPSFYRRRVDRILELCENSLESWVIGAIIASGVVGLMSVLGLTLLGVPAALALGVLAGFFNFIPNIGPTLSVVPAMAIALLDAPWKSLAVLILYFFIQQAESSFITPMVMAHQLSLLPAVTLISQLLFFNVFGFLGLFLALPLTVITKIWVQEVLVKDILDEWGNKQSPASMQVVVQTDAKEANVEINYPETNSQPSIDPSSKPDLPPNDDNDIFKETGFGK
>NZ_AP018254.1|WP_096622620.1|3554876_3555794_+|histone-deacetylase
MDLPIIYHPDYVAPLPPGHRFPMQKFGMLYDMLINDGVGKPEQFHQPVRPPVKLIELVHTPGYVEAYCQGSLDGKQQRRIGLPWSEALVNRTCVAVGGTILTAKLALECGLACNTAGGTHHAFPDYGSGFCIFNDLAIACRVFLQEGLVRRVLIVDLDVHQGDGTAYIFRDDPNVFTFSMHCEVNFPGIKQKSDLDVPLAEGMGDDEYLQTLGSYLPDLLSHVKPDLVLYDAGVDTHRDDKLGKLQLTDTGLFCREMQVLSTCTKVGVPVACVIGGGYATDMAALVYRHSILHRAATQVYQQRWF
>NZ_AP018254.1|WP_096622621.1|3555895_3558310_+|hypothetical-protein
MGWKPLRERLDNLPLVLAGPIVRRVDSRSVTVWVALKQSQRVILKVFDLDGQLILQGDRETVQLGINLHVVAVTAAVPGDLLVYGNSYLYDLEFAGGKGLGDPGVINGNGDIADIAYPPYKLPSFALVPRNLNDVRLVHGSCRKPHGESLDAFAGIDKMIREALQVNPAQRPHQLFLTGDQIYADDVADALLFMLLDAGEALFGWQEQLPDVTDITELAPGKRNRVATETAGLTASITKLNRISQAAKSHLMRFSEFACMYLFAWSDVLWVDRLDFPTRAQVYPLAPNTKQHEFEQEVEDLKKFAIALKSVRRSLANVPTYMIFDDHEVTDDWYLNFAWCDRVLRKPLGVRVIQNGLLAYALFQAWGNTPEQFDRDQPGGALLTAVKAWCALQGNNDTCNQEILHRLGIASFADIQASQPRRLPVSPDAIRWSYTVLTPSYCVLVLDTRTNRDFPGQDFDFPGLISQEGCKQQLADLYLSSHVDVTIIISPSPVIGLPFLEGIQRVAKNITGKFGVAAWAFDPEAWALQTEAFERFLAALAQGAGANSRIVILSGDVHYSFGARMQYAISQTVGKHRFNTQIVVAQFTSSSFKNEDSSIGGSHALHHKGFIPIEQIRHSPQSKILGWENPDRGRLKIGYVSHFNDGGMVSHPWVISGNPAKINLECDRAWFRVLEITRPPQWYYRIDFLPGKREPVEPLRRSQILPVVAPLPKQPRQQALAVYLGNAKKPPQKYQEVVGVNNFGEITFEFSKEKQIATQTLWWRLESRDEQTLLEPFPLSQCDISLNFDDEQYPFSDVMREIVI
>NZ_AP018254.1|WP_096622622.1|3558490_3559387_-|prohibitin-family-protein
MSFIFSLLTTLVAILVYFSSSRLEDRRTVWIVRGVSGLIGAIALFSSIMRVFVIVPPGNVGTVNVFGKVANNALEPGVHVMNPFANILYFSTRLKDVKENVDATSQEGLALNIDVSLQYKLDPRKAPEVYKNIGTDEKQLVISRFRSITRAITAQYPAMEIYSSKRQEIAQKIEQQLTEYLSSLGFIVEDILLRNVKMPESLQTAIQQKLQAEQESQKMKFVLEKEQKEAERKKIEAQGIAESQKIISSGLTNQILQLRAIEATQKLATSPNSKVVVVGGGQAGTPIFISPDNSRGNQ
>NZ_AP018254.1|WP_096622623.1|3559540_3560071_-|tetratricopeptide-repeat-protein
MDNKLAIIYLGVFVGLLTFTLVSVLRQIWKTQRVERNFSKLRNKLSKEKGTAQEYYELASIYADKKLYSQAISLFQKAIKAAEAEGEGEDSISIIYNGLGYAYFAQEQYDLAIRQYKEALKYQPNYVVAMNNLGHAYERKKLNSSALEMYENVLKLEPNNKIAKRRCESLRRLVSV
>NZ_AP018254.1|WP_096622624.1|3560241_3561066_-|transporter-substrate-binding-domain-containing-protein
MRCTRLLILVLLLSFALWLLPDYAQARELKEIRHQGSLRIAVKDNIRPLGFRDGKGQLQGLEIDLARRLAEDLLQKPHSLQLQPVNNRDRLAWVLENQVDIAIARVTATPGRSRLVNFSIPYYLDSTVLITKSPSLQRLVDLKSRKIAVLRGSSTVDRVNYFIPNAEIVGVNSYQQAYQKLEQNQVDAFAADGSILTGWTQLYPGYRLLPIRLSTEPLAVVIPKGLQHDQLRQEINQAIARYLETGWLKERIEYWGLLPSQLQIPISESTTKDR
>NZ_AP018254.1|WP_157780755.1|3561251_3561491_-|HAD-hydrolase-like-protein
MFDLDGTLTDPREGIITCINHALSTLGQSVSHDSELTRFIRPPLGDCFRELLSSANRVDTAIAAYRERFAVVGMFENSV
>NZ_AP018254.1|WP_096622626.1|3561557_3561914_-|50S-ribosomal-protein-L20
MARVKRGNVARKRRKKILKLAKGFRGSHSTLFRTANQQVMKALRSAYRDRKKRKRDFRRLWITRINAAVRLHGMSYSKFMGNLKKANINLNRKMLAQLAVLDPDGFSKVAQIASQVQG
>NZ_AP018254.1|WP_096622627.1|3562079_3562277_-|50S-ribosomal-protein-L35
MPKLKTRKAAAKRFRATGTGKIVRRKAFKNHLLEHKSSNKKRNLSKMAIVNERDEDNVRGMLPYL
>NZ_AP018254.1|WP_096622628.1|3562319_3563135_-|MlaE-family-lipid-ABC-transporter-permease-subunit
MQPKHKLGKSWTSRLLAALLLIGQVWLHLVQGRIYHRQILEQMVAAGPGAIVPAFLVNFFAGMIFTIQTARELFKYGAENTIGGAFALAFCRELGPILTASILSGQVGSAFAAELAEMQVTEQIDALHVLRVDPIDYLVLPRVIACCVMVPVMTILGIVIGVTGGVLIGFYVYRVAPEVFLESVRKSLGISDIFTVLFKSFIFGTVIAAIACSWGLTTVGGAKQVGESATAAVVTTWIAIFVIDFLLSLLIFEKLAIFAINIFPVLGLNLG

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Crispr_ID: NZ_AP018254_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_36

3716679-3718910

TypeIII

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CRT

30 spacers

cas2,cas3,csm3gr7,csx19,csx10gr5,cas10,csx1,WYL

The CRISPR arrays of NZ_AP018254_36

>merge|NZ_AP018254|36|3716679-3718910|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACATAGCTGAGATAGAGCTAGACAAACAGGAACAAGAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCATCGTTCCTTATGATGCATGATTGTATTGCGAGGAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTCTGTTTATGAGGCAATAGGTGACCTTGAGCTGCTTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAAGGCATACTCCTTGTCCTCTGTGGCTTTAAGAAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAGCAGCCGCCATGCGATCGCAGAAGATGCCCTCTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCAAGTATCTCTCCGCCAATCCCAAATCCCCATTCCCCCCGTTTCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAAACATCTTCCTTCCATTCTGGAAGATGCTTTAAGCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCAAGGGGTGTAACCTCCAGCAAGAGGCATTTGGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTACTTATCAACAGTACTCAAACCCTTACCACACACCCTTTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCAGGTTTTCTTGGAGGTCAGAAAAGCTTTCGTACACGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGAATCTGGGGTTAAAGTTTGCGCCTTCGCGGTGGTCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAAGACTGGCGACAGTCAACACAGCAGAAATTTGTCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCATTTCACCATCACAGCCAATAGGGATACCCAGGGGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCCCTAGAAGGTGCCTGAAATTGCCTAAATGGGGAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCACCAATGATGTGGACGAGAACTGGGTTCTATACAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACACGGGCGTAGCTAGCCTAGCCCTCTGAAGAGTGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAAAAGGAGGTAAGGAGGCAAAGGAGAAAGCCATAGAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCTGAGCGTATGCCAAGTTGGGTCGCACCAGATTAGGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCAGAGGCCTTCTAGGGCATCCTAGCGGGGCTCGAATGATGGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGACAAGCTACTTATAGAGGTAGCTAGGAAAATATCAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGAGGTTGAGGAGTATATTGCTCCTCATGACGGGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACACGTTGTGGCTGGTCGCCAAGTTAGTAACATTGGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTCGTCGTGAATACAGGCAAGACATTCGAGATTGTAGAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCAATAGTCTTCCCGCTCACCGCGAGCCGAGGCACGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTAGGGCATCATTCTTGGCTAGCAACTCATTGCGTCTGGCATTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAGCTTGAGTATTGGCTCTTCTCTGAATTTGAAGCTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTTAAAGAAATCAGCTACAGCATCCTGTTTTGTAGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCCTAGATGTGAGTGAAATAGAAGGGTATTATATTGAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTATATAATTTTAATGGGAACTTTTTCGCATAAAGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTAAGGATTTCTTCAGCTATAAAGCGACTAAATGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|36|10|3716679-3718910|PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ATAGCTGAGATAGAGCTAGACAAACAGGAACAAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCATCGTTCCTTATGATGCATGATTGTATTGCGAGGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCTGTTTATGAGGCAATAGGTGACCTTGAGCTGCTT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGGCATACTCCTTGTCCTCTGTGGCTTTAAGAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGCAGCCGCCATGCGATCGCAGAAGATGCCCTCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGTATCTCTCCGCCAATCCCAAATCCCCATTCCCCCCGTTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAACATCTTCCTTCCATTCTGGAAGATGCTTTAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGGGTGTAACCTCCAGCAAGAGGCATTTGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TACTTATCAACAGTACTCAAACCCTTACCACACACCCTTT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGTTTTCTTGGAGGTCAGAAAAGCTTTCGTACAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAATCTGGGGTTAAAGTTTGCGCCTTCGCGGTGGTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGACTGGCGACAGTCAACACAGCAGAAATTTGTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCATTTCACCATCACAGCCAATAGGGATACCCAGGGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCCCTAGAAGGTGCCTGAAATTGCCTAAATGGGGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CACCAATGATGTGGACGAGAACTGGGTTCTATACA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGGGCGTAGCTAGCCTAGCCCTCTGAAGAGTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAAAGGAGGTAAGGAGGCAAAGGAGAAAGCCATAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGAGCGTATGCCAAGTTGGGTCGCACCAGATTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGAGGCCTTCTAGGGCATCCTAGCGGGGCTCGAATGATGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GACAAGCTACTTATAGAGGTAGCTAGGAAAATATCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGTTGAGGAGTATATTGCTCCTCATGACGGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGTTGTGGCTGGTCGCCAAGTTAGTAACATTGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCGTCGTGAATACAGGCAAGACATTCGAGATTGTAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAATAGTCTTCCCGCTCACCGCGAGCCGAGGCAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAGGGCATCATTCTTGGCTAGCAACTCATTGCGTCTGGCATT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGCTTGAGTATTGGCTCTTCTCTGAATTTGAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TTAAAGAAATCAGCTACAGCATCCTGTTTTGTAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCTAGATGTGAGTGAAATAGAAGGGTATTATATTGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATATAATTTTAATGGGAACTTTTTCGCATAAAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGGATTTCTTCAGCTATAAAGCGACTAAATGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|36|34|3716679-3718910|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ATAGCTGAGATAGAGCTAGACAAACAGGAACAAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCATCGTTCCTTATGATGCATGATTGTATTGCGAGGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCTGTTTATGAGGCAATAGGTGACCTTGAGCTGCTT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGGCATACTCCTTGTCCTCTGTGGCTTTAAGAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGCAGCCGCCATGCGATCGCAGAAGATGCCCTCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGTATCTCTCCGCCAATCCCAAATCCCCATTCCCCCCGTTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAACATCTTCCTTCCATTCTGGAAGATGCTTTAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGGGTGTAACCTCCAGCAAGAGGCATTTGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TACTTATCAACAGTACTCAAACCCTTACCACACACCCTTT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGTTTTCTTGGAGGTCAGAAAAGCTTTCGTACAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAATCTGGGGTTAAAGTTTGCGCCTTCGCGGTGGTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGACTGGCGACAGTCAACACAGCAGAAATTTGTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCATTTCACCATCACAGCCAATAGGGATACCCAGGGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCCCTAGAAGGTGCCTGAAATTGCCTAAATGGGGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CACCAATGATGTGGACGAGAACTGGGTTCTATACA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGGGCGTAGCTAGCCTAGCCCTCTGAAGAGTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAAAGGAGGTAAGGAGGCAAAGGAGAAAGCCATAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGAGCGTATGCCAAGTTGGGTCGCACCAGATTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGAGGCCTTCTAGGGCATCCTAGCGGGGCTCGAATGATGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GACAAGCTACTTATAGAGGTAGCTAGGAAAATATCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGTTGAGGAGTATATTGCTCCTCATGACGGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGTTGTGGCTGGTCGCCAAGTTAGTAACATTGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCGTCGTGAATACAGGCAAGACATTCGAGATTGTAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAATAGTCTTCCCGCTCACCGCGAGCCGAGGCAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAGGGCATCATTCTTGGCTAGCAACTCATTGCGTCTGGCATT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGCTTGAGTATTGGCTCTTCTCTGAATTTGAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TTAAAGAAATCAGCTACAGCATCCTGTTTTGTAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCTAGATGTGAGTGAAATAGAAGGGTATTATATTGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATATAATTTTAATGGGAACTTTTTCGCATAAAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGGATTTCTTCAGCTATAAAGCGACTAAATGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|36|7|3716679-3718910|CRT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ATAGCTGAGATAGAGCTAGACAAACAGGAACAAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCATCGTTCCTTATGATGCATGATTGTATTGCGAGGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCTGTTTATGAGGCAATAGGTGACCTTGAGCTGCTT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGGCATACTCCTTGTCCTCTGTGGCTTTAAGAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGCAGCCGCCATGCGATCGCAGAAGATGCCCTCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGTATCTCTCCGCCAATCCCAAATCCCCATTCCCCCCGTTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAACATCTTCCTTCCATTCTGGAAGATGCTTTAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGGGTGTAACCTCCAGCAAGAGGCATTTGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TACTTATCAACAGTACTCAAACCCTTACCACACACCCTTT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGTTTTCTTGGAGGTCAGAAAAGCTTTCGTACAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAATCTGGGGTTAAAGTTTGCGCCTTCGCGGTGGTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGACTGGCGACAGTCAACACAGCAGAAATTTGTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCATTTCACCATCACAGCCAATAGGGATACCCAGGGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCCCTAGAAGGTGCCTGAAATTGCCTAAATGGGGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CACCAATGATGTGGACGAGAACTGGGTTCTATACA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGGGCGTAGCTAGCCTAGCCCTCTGAAGAGTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAAAGGAGGTAAGGAGGCAAAGGAGAAAGCCATAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGAGCGTATGCCAAGTTGGGTCGCACCAGATTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGAGGCCTTCTAGGGCATCCTAGCGGGGCTCGAATGATGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GACAAGCTACTTATAGAGGTAGCTAGGAAAATATCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGTTGAGGAGTATATTGCTCCTCATGACGGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGTTGTGGCTGGTCGCCAAGTTAGTAACATTGG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCGTCGTGAATACAGGCAAGACATTCGAGATTGTAGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAATAGTCTTCCCGCTCACCGCGAGCCGAGGCAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAGGGCATCATTCTTGGCTAGCAACTCATTGCGTCTGGCATT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGCTTGAGTATTGGCTCTTCTCTGAATTTGAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TTAAAGAAATCAGCTACAGCATCCTGTTTTGTAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCTAGATGTGAGTGAAATAGAAGGGTATTATATTGA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATATAATTTTAATGGGAACTTTTTCGCATAAAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGGATTTCTTCAGCTATAAAGCGACTAAATGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096622731.1\|3705568_3708004_-\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_AP018254.1\|WP_096622747.1\|3715618_3716416_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622757.1\|3724093_3725674_-\|hypothetical-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|131722
NZ_AP018254.1\|WP_096622763.1\|3727966_3729223_-\|DUF1887-family-protein	csx1	mkCas0112_csx1_CAS-III	gnl\|CDD\|312526
NZ_AP018254.1\|WP_096622743.1\|3714058_3714424_+\|DUF4864-domain-containing-protein	unknown	unknown	gnl\|CDD\|374400
NZ_AP018254.1\|WP_096622765.1\|3729336_3730761_+\|TIGR03985-family-CRISPR-associated-protein	WYL	mkCas0075_WYL_CAS-I:CAS-III	gnl\|CDD\|274901
NZ_AP018254.1\|WP_096622735.1\|3708333_3708756_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_AP018254.1\|WP_096622755.1\|3722609_3724094_-\|hypothetical-protein	csm3gr7	cd09683_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187857
NZ_AP018254.1\|WP_096622739.1\|3711242_3713405_+\|nitrate-reductase	unknown	unknown	gnl\|CDD\|239155
NZ_AP018254.1\|WP_096622737.1\|3708941_3710690_+\|DUF3352-domain-containing-protein	unknown	unknown	gnl\|CDD\|371750
NZ_AP018254.1\|WP_096622759.1\|3725670_3726354_-\|RAMP-superfamily-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NZ_AP018254.1\|WP_096622741.1\|3713434_3713893_+\|phosphate-starvation-inducible-PsiE-family-protein	unknown	unknown	gnl\|CDD\|225965
NZ_AP018254.1\|WP_096622749.1\|3719182_3719449_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
NZ_AP018254.1\|WP_096622745.1\|3714834_3715449_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096622729.1\|3704341_3705400_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018254.1\|WP_096622761.1\|3726356_3727970_-\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|224272
NZ_AP018254.1\|WP_096622753.1\|3719810_3722027_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NZ_AP018254.1\|WP_096622727.1\|3703710_3704304_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_AP018254.1\|WP_096622751.1\|3719561_3719810_-\|DEAD/DEAH-box-helicase	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|365991
NZ_AP018254.1\|WP_096626253.1\|3722016_3722601_-\|TIGR03984-family-CRISPR-associated-protein	csx19	cls001376_csx19_CAS-III-D	gnl\|CDD\|274900

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096622731.1\|3705568_3708004_-\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_AP018254.1\|WP_096622755.1\|3722609_3724094_-\|hypothetical-protein	gnl\|CDD\|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	8.72938e-13
NZ_AP018254.1\|WP_096622757.1\|3724093_3725674_-\|hypothetical-protein	gnl\|CDD\|131722	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family. CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily (pfam03787).	1.37075e-42
NZ_AP018254.1\|WP_096622763.1\|3727966_3729223_-\|DUF1887-family-protein	gnl\|CDD\|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.87207e-05
NZ_AP018254.1\|WP_096622743.1\|3714058_3714424_+\|DUF4864-domain-containing-protein	gnl\|CDD\|374400	pfam16156, DUF4864, Domain of unknown function (DUF4864). This family consists of uncharacterized proteins around 120 residues in length and is mainly found in various Anabaena and Nostoc species. Distant homology analysis suggests this family is related to NTF2-like proteins and specifically to proteins that bind small molecules. HMM partly overlaps with Tol_Tol_Ttg2 (PF05494) involved in Toluene tolerance and lumazine binding family (PF12870) and these families should form a clan.	1.53459e-40
NZ_AP018254.1\|WP_096622765.1\|3729336_3730761_+\|TIGR03985-family-CRISPR-associated-protein	gnl\|CDD\|274901	TIGR03985, hypothetical_protein_sll7078, CRISPR-associated protein, TIGR03985 family. Members of this protein family belong to CRISPR-associated (Cas) gene clusters. The majority of members are Cyanobacterial.	1.31338e-89
NZ_AP018254.1\|WP_096622735.1\|3708333_3708756_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	1.96312e-83
NZ_AP018254.1\|WP_096622759.1\|3725670_3726354_-\|RAMP-superfamily-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	2.20705e-12
NZ_AP018254.1\|WP_096622739.1\|3711242_3713405_+\|nitrate-reductase	gnl\|CDD\|239155	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. Members of the MopB_Nitrate-R-NapA CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_AP018254.1\|WP_096622737.1\|3708941_3710690_+\|DUF3352-domain-containing-protein	gnl\|CDD\|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	2.77794e-156
NZ_AP018254.1\|WP_096622741.1\|3713434_3713893_+\|phosphate-starvation-inducible-PsiE-family-protein	gnl\|CDD\|225965	COG3431, COG3431, Predicted membrane protein [Function unknown].	1.19345e-14
NZ_AP018254.1\|WP_096622749.1\|3719182_3719449_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	9.52042e-22
NZ_AP018254.1\|WP_096622745.1\|3714834_3715449_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	2.40975e-36
NZ_AP018254.1\|WP_096622729.1\|3704341_3705400_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.32427e-84
NZ_AP018254.1\|WP_096622761.1\|3726356_3727970_-\|hypothetical-protein	gnl\|CDD\|224272	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms].	1.39022e-05
NZ_AP018254.1\|WP_096622753.1\|3719810_3722027_-\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	1.2523e-100
NZ_AP018254.1\|WP_096622727.1\|3703710_3704304_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.70501e-46
NZ_AP018254.1\|WP_096622751.1\|3719561_3719810_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|365991	pfam00270, DEAD, DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.	7.20142e-10
NZ_AP018254.1\|WP_096626253.1\|3722016_3722601_-\|TIGR03984-family-CRISPR-associated-protein	gnl\|CDD\|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	1.34803e-37

>NZ_AP018254.1|WP_096622747.1|3715618_3716416_-|hypothetical-protein
METSSSRQLPGIIRQIITLVAIVGAFVINIISNIFPLGGETIGEISNGLFKDVLIIPANYAFAIWGLIYLGLFAFAIYQLLPGQRQNPAFNTAGYLITFASLAQIAWVYLFLLRQFVLSLLAMLLILVPLIAAYQALKINVEPVNRIRKWCVNIPIAIYLGWISVATIVNVACTLYALNWDGFGVPQIITVVMLLIATFLGDLVRVRRYDAAYAGVVIWALIAIAVRHFSIPVIFVTACACAIALLLRIFIPDQPRPVLDSRSSP
>NZ_AP018254.1|WP_096622745.1|3714834_3715449_+|Uma2-family-endonuclease
MTQSPAKIVTYEEFIQWLPNDGKRYELHDGVIIEMSQPTGKHEKVTTFLTLELAVQIRNLALPFLLPKTALVKPPQRNSGYFPDILLVNPDNLVNEPLWETQSTLIQGISIPLIIEVVSSNWRDDYHKKFADYEEMGIPEYWITDFAALGGRDLIGNPKQPTLFICNLEDGEYVKKAFRGDEPIISQTFPQLNLTAQQIFDAAV
>NZ_AP018254.1|WP_096622743.1|3714058_3714424_+|DUF4864-domain-containing-protein
MEITDSDRTAIRFVIEQQLHAFQHDNADQAFAFASPAIQAQFRNPQTFMRMVKSGYAPVYRPRSVIFEGITTIEGNITQILLLLSPNGKPVRGLYLMEKQANQTWKINGCVLIPVDADIFD
>NZ_AP018254.1|WP_096622741.1|3713434_3713893_+|phosphate-starvation-inducible-PsiE-family-protein
MGRMWKGFRNLMKDDNFTRLLGSLEVLIAKVLAVMMVGIIIYATGDLIVFIFREVFTTQYGTFYQKLFKLFGLFLNLLIALEILENITGYLKKHVIQVELVITTSLIAVARKIIILDLGKTEGMKITGLAIAILALSISYLIIHSNNAKHSS
>NZ_AP018254.1|WP_096622739.1|3711242_3713405_+|nitrate-reductase
MSEITKTLCPYCGVGCGLEVLAVQPDVIETEGGNLTDNHNTRWKVRGDRNHPSSQGMVCVKGATVTEALDKSRLLYPMVRDSLDGEFRRVDWDGVLDLMVSRIQRIWENFGADAICMYGSGQMQTEDYYVAQKLLKGCLGTNNFDSNSRLCMSSAVKGYQLSLGSDGPPCCYDDLELADLVVIIGSNTAECHPIVFNRLQKYRKKHPQAKLVVVDPRCTETAKVADLHLPLRPGTDIDLLNGIAYLLLQWGCIDAEFIADATNNFPAYAQLVQFYTPELVTQRCGISLEALQTTAKYWAEAKNVLSMWSMGVNQSSEGTAKVNSIINLHLLTGQIGKPGAGPFSLTGQPNAMGGRESGGLAQLLPGYRTVTNPVHRQQVEEFWQLPPGSISSQPGRTAWDIITGLEQGEVKLLWIVATNPAVSLPNLQRAQAALAKSPLTIYQDAYYPTETSAYAHILLPAAQWGEKTGTMTNSERFVTLCPAFRQPPGEARPDWQIFAEVGKRLGFADKFTFEDAGSVQREFVQLTRGRVCEMTEISHERLAETGAIQWGGKRLYTNALFPTDNGRANFVPRHARGLAEPPNPEYPFVLTTGRLYGHWHTQTRTGRIDKIQKMYPQPWMEIHPRDAVALGVIDGTVVEVRSQHGSAQFPAKITRHISPGVVFIPMHWGKLWGENSEANALTHPQACPDSRQPELKACAVQLVPIIEKTLVQGYQLQSSQ
>NZ_AP018254.1|WP_096622737.1|3708941_3710690_+|DUF3352-domain-containing-protein
MTLPLASVSSEKKKKPSLLLTFSAVAVLITGGIAAVWFFTQGKPLVRSLPIGATVIPQDAVFTVSLTTDVQQWDSLREFGTKQLQTELDRNLIALRDRFLSRYGFDFQQHVQPWVGDGVTFAVLAPPKPAEGSSPSINDTAINPQPLLVVLPIKNPQAGEKILTQMQTVSAKTWRDTPAESLRDRTYGNVKIKEATNKNGEELAIAIVDGGKYVVMSDESQAINQVIDAQQQQTTINKLPGFADNFTKIASYQPFAQFYLNIPSSAQLISGLPNRQLPAQVLGQLQNHQGLVGTVLVEPEGVRLKAASWLKPNSRRTLAVENNAATMAKRVPAQTMMLWSGSNLRRLWTDYVATSQGNSLAPINPEQLRKDFKSLTNLELERDFLSWMGGEFALSIVPASSNNDFRAALLFMVQVRDRPKADAAMKKLDEAMSTQYQLKIEKTTVANQELTRWFSPFGTLTASHGWMDNNVKFITMGAPITDIILPATPNPLAQTSLYQTAVPSPFNPGNSNFFLDVERLAKNFPLPPLFPNQQSLLAATSTIGISTNINDNRSIQYEALIRLRKTDKPSPLPTPMETLKLE
>NZ_AP018254.1|WP_096622735.1|3708333_3708756_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MTTSNEKFAVEKTEEEWLQQLTPEQFRVLRKHGTERAGTSPLDKLYEPGIYSCAGCGQPLFSSETKFNSGTGWPSFYQPIEGAIATSIDKTLFMTRVEVHCSRCGGHLGHVFRDGPAPTGLRYCMNGVALNFTPAEGDNS
>NZ_AP018254.1|WP_096622731.1|3705568_3708004_-|phenylalanine--tRNA-ligase-subunit-beta
MRISLNWLRELVEIKLTPEELAQTLTMAGFEVEEIEDRRTWANGVVVGRVLQREQHPNADKLSVCQVDIGTGEIQNIVCGASNVRADIFVAVATVGTYLPNIDLKIKPAKLRGVQSNGMICSLKELGLPTDVDGIHIFPQEDLQVGTDVRPLLGLDDVVLDVTTTANRADALSMVGVAREVAALTGGRLKIPEPGDVVVPTERGNLSIKIEERQACPTYIGTAIANVKIAPSPDWLQQRLRAAGTRPINNIVDITNYVLLEWGQPLHAFDRERLQAIAGSENLTIGVRFAHPGETLKTLDGQVRHLSQQSLLITANDKPVALAGVMGGEESEVVDNTQNIILEAALFDNVAIRRSSRSVGLRSEASSRYERGVNFAGLEIATRRALSLITELTGGTIITQSQEDTRPDPANWSRTVHLRLQRVNEVLGPVNLGEQTGELTAADVERSLTALGCQLTPAENYSWNVTVPPYRYRDLEREIDLIEEVARLYGYDNFCDTLPETAEAGYLPFEQEILRRLRAAMRAAGLTELIHYSLVKPGEERQVVLSNPLFAEYSALRTDLISGLIDAFQYNLEQAKVALNGFEIGQIFWQDEDGLHEAETIAGILGGDTTVGKWSRGGKDKPMTWYEAKGILESVFTQLGISVEYQPDHRDSRLHPGRTASLWIGGERLGTFGQLHPQLRQQRDLPDAVYVFQLDLEVLFDALDKDEILVPRFQNYSTYPASDRDIAFFIPTKYTVTEIERAIAKAGKGLLESVQVFDEYRGENVPPGQRSLAFRLIYRASDRTLTDTEVDPIMEKVRESLVEKFGVTLRS
>NZ_AP018254.1|WP_096622729.1|3704341_3705400_-|WD40-repeat-domain-containing-protein
MRNNQKLILFSYPTQIFAAITIWLVLVAGVFMVASPANSQLLSNLTPAPATRTREPKLLYKMKGHGGTVKSLAFSPDSKTVVSGGGENDATIRLWDVNKGKARGIINRAHRGTVHAVLVSPNGQTLASGSSDTTLNLWNLRTNRFTRTFIAHTGVILALAVTADSKMLVSAATDGVRAWDLVQQRSLGALVQFDNYLHAVTLSPDGKLAATGDRNGVVKLWNIGAGKELWRLSAHTQTVTGVAFTPKGDQLVTTSRDRNIKIWDLTTGKLLRTLSDHDNSVNAIAIHPGGEMLASAGRDGIKLWNLQTGELLANLYEHQDWVSAIAFSPNGKYLASGGFDKAVYLWEILETH
>NZ_AP018254.1|WP_096622727.1|3703710_3704304_+|Uma2-family-endonuclease
MEALTLNIPPAVGLTDEQFYQLCIANEPWQLELTQTGELIIMPPTGGESGIRNSDIIIELGLWNRKTKLGKVFDSSTEFKLPNGAYRCPNAAWVKLERWEALTQEQKRRFPPICPDFVVELRSETDNLDKLRGKMREYQENGARLGWLIDPQTPLVEIYRPGQNVEVLHFPLEHPPQLDGESVLPGFILDMAIILNP
>NZ_AP018254.1|WP_096622749.1|3719182_3719449_-|CRISPR-associated-endonuclease-Cas2
MSFFACSQISSTGFCCGGFEAKHSQVIRYSVFECDLTDTQYAKLRSRLSKLIKPDEDSVRFYFLCACCQGKVERIGGEMPRDNSIFLV
>NZ_AP018254.1|WP_096622751.1|3719561_3719810_-|DEAD/DEAH-box-helicase
MDISQLFHTLTTHQPYNFQIQTINHILNHKDTILRAPTGSGKTETAIAPFLFAKTLQIDFPNKLIYVVPLLTLANIAILNHL
>NZ_AP018254.1|WP_096622753.1|3719810_3722027_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MLPRPLKNVPENRKAVAPYNFVELPNQIVEVKPDSLPQQNIYYSQSENRYTGRINCTLTTESPLYIRCGLTTEEFACGAESKDLADFFYTGIANKARKPVIPGSSLRGMIRSLVEIISFSKLDKVSDADKFFFRAVAADKDDPLKNIYTNYLKKENLKAGYLVKKDDGWYIRPATKIEDKYFIYIKEKHVEGKIDGFICMKSLDYVPQYRQNISFGDFYTQNGRCCAKKISNDCTEFEYMGVLVTSGNMLESTNLDEQERERKLKSKGGRKYHYLVGIPDSKAELIKINDDAITAYCRALTNFQKAKSPYDNNPFEQDSGVLKNGRVIFYSQIKSEEIILFGHCPNFRIPYSPLQDGKAASAVDFIPNHIGKSDKIDLADAIFGFVREKDKNHPNSTHENNGTKLSALAGRVFIENAICEKTVNDDIWLTGNLEQTITPKILSNPKPTTFQHYLVQSNDDKAQLKHYASKPVEDTVIRGHKLYWHKPNAKKEDIEENDTTKIKKSSSQYTKIKPIKAGVKFTFDIHFENLSNIELGALLWILKIAANPKYCLSLGMGKPLGMGAVKIEYQLLLNNRHERYSQLFNSNQWLTGEENQSNTDSKSQACIDAFEKFIVDNIHPDDHPEGYNATKLDKIPRIQMLLLMLRCDNPPSADNTRYMTIEPTNEYKERPILPTPFQVMNKLEEDKRKFPPPTESPEKPKLKKNNSRKKNHQNNRSKPGNGNNSNFATQRPPKPPKK
>NZ_AP018254.1|WP_096626253.1|3722016_3722601_-|TIGR03984-family-CRISPR-associated-protein
MNRPNSELIEVEVKESFDLKVWLEKQASEYQLKYLLAHAEDGVIWGKFQNGTLKTSDSVFPQLAKLRLLTLQQCRIFGEHSEVMLWRNDDEFKARCVEDTHLDKEEYISENQILWGTQAENISDGFTLVSDGSQGLRHAVPLIDIPFDSNQKLYRPLRLCVRHYLDEDKETGLVRIYLSRLVNLTTEKELKNAA
>NZ_AP018254.1|WP_096622755.1|3722609_3724094_-|hypothetical-protein
MSKYCPDKNPRNRNQRHIIERIIIKGNLVLDTPTCFGSGDNDGDTDLEILRDSIEDKALLMGSSIAGALRNYLREHQNGYNATDVSILFGGQRSDDDGDQSPLIINDAFSSEIIKVELRDGVKINSITRTAEDGAKYDLEFLETGTQFPLYFELLVDDKQHDRTQLIQELAISLQGLETGEIRLGIKKHRGFGRCHVKKWQVWQFDLHNHEQRIQWLNFPHWEPGFLKNHPTHDNIAKALGVTFSEQEIEDKRQHLTITAKFTLATPLLIRSGQASTNIAPDVVHLKSQRNGELKSILSGTALAGVLRHRGERIVNTIQQNIERDFEEKEKFTNNFIDAIFGVDVTKDKTREPKASRLVVDEVEINNTTDLIQNRIAIDRFTGGALHGALFNEQPIFGNEKTNLEIKLTLRQPKDAEIGLLLLLLKDLWTGDLPVGGTSSIGRGRLQGREATITHNDKTWKISQPSPTESLVIENSENEDLEKFVTALHQEVTP
>NZ_AP018254.1|WP_096622757.1|3724093_3725674_-|hypothetical-protein
MKAITFSLHTKQPLLATSFQGDPNSDVSYSYIPGSMIRGAIIGRYMKHHNLSELDLANEQVQRLFFDTKKIKYLNAYLLSQKKQRTLPILRSWFRDKETKLNENVQNIHAYDFSVERNEGKLETPKFVGEGFWTEEIDCIRYYKEKRRINIHNRRDRTKGRSTQTTGEGEIFRYDAIDAGQTFQAVILCEEIDIHLLELLHKSSDIWLGGSQSAGYGHTQITDIQTHENWNEVGSPKSRTEHDNFTITLLSDLILRDEMGQYAVIPPSSQQTSTPIQKALETALTRIIGQDIKLQVKESFASSTLIGGFNRKWGLPLPQIPALAAGSVFVFENIEITAEQIEELESVGLGERKIEGFGRIAVNLREKKEFKIALPETEQPQLATNSSRNIATKMVERLLKAKLEQKLREQLSPLEIKGNISNSQLSRLQLIARKALSTGDCNLVLTLINNLPANAKIQFERATINNKSFKEQLTTWLNHPEEWISNKHDLKVKISDIEMELKPEFAREYTLRLILAVTKKTIKGRK
>NZ_AP018254.1|WP_096622759.1|3725670_3726354_-|RAMP-superfamily-protein
MRYKLKIKLLSDTTFGRGDGVAGLVDQEVEHDKYGLPYLRGRTLKGLLSEECDNLISILPDENQRNYWTSIACQLFGIPGSKLETTAAMHIGDAYLPEDLRQAVAYEVDNEQLTNQDILHSLTTIRRQTAINYENGVAEKGSLRSFRVVIRDLEFQADLLFEKQPSDAMLSLLSVGTLALRRLGSGRNRGRGHVCCRLHDADGKDITEDYLNLFATIKLETMTEDNS
>NZ_AP018254.1|WP_096622761.1|3726356_3727970_-|hypothetical-protein
MSQYTLTFIDTTGIQSYVFSSNRLRENIGASYLVSAATGEWVEETLEKVGIPRNKQYEPIDSSDCHGEIIYAGGGNALIIFRTETLAKQFTQILSKRVLIDAPGLNLLVAHKTFDWKEDKLYQVVKNLVTEKIERQKYERVISTPLLGLGVTATCNSTLLPAVDRSDNHIQYEDGEGEKIYLVSRETKQKLIAARKANQKLQKLFEGVVNTDIYKFPFRTDNLGRTSGESSYAAVIHADGNGMGKRFQKHGEGKENRDYINSMRSLSASVQQAGEKALIAITEKIVNSISQGKIVGKLGEFTLKSQYYLPFRPLVYGGDDTTFVCEGRIGLELAALYLQELEKQEIADGKKLTACAGICIVKTHYPFARAYEISEELCREAKKFVKEKVKEKKEFEPDGFSALDWHLAASGLSGSISEIRKREYQVKSGELNMRPVRLNKHDDEWRTWEGFTDIIQEFKAGENWCDRNNKIMDLRDVLRRGKLATQDFLRNIGVERLPDFPKCGKEIDKLAKEGWLGKRCGYFDAIEAMEFYLGLDD
>NZ_AP018254.1|WP_096622763.1|3727966_3729223_-|DUF1887-family-protein
MSTSEFDKYKVDYLFLLIGENPLPNYVAANLLLNKGGIAYLIYSTGTEKSAERLQMILKSELNGFKDVVLRSLDDYESDPFHIQKKIREELEKIRDGKIGLNYTGGTKAMSVHSYRAVFKKHPDAFFSYLDPRRLEMRIDREDRECDRLKIKPETLQVELVKLFQLHGLELKGTPKKESQLVGLTNIFVDIFTDKSKANQWFDWYYHKFREQAYKDSRGDWRSPTDLEKMVIPLDNLPQEIIAGFQQEGFITDDNQLSLSKVKATNQFAQLEYFCKWLDGLWLEHYVLEQVKNIANANSITDYGLNFEIPLVGTKNGFEFDVAFTRGYQLFAISCTTTDRRYLCKQKLFEAYLRARQMGGDEARVALVCCSNEPDTIKAEITDSINDKKIKVVGREHLTNLSQELVYWIQENDRETSK
>NZ_AP018254.1|WP_096622765.1|3729336_3730761_+|TIGR03985-family-CRISPR-associated-protein
MNTIFKDEPDYKLLQRLANGSLDQSQNLTRAIRLWTLLRWLYGEYGYTQLTDPFTYADWRAAFFTKSHRDEKQADIRNHQDLNCACSKTIKQWLGDLEVAIDKWQISLQSQIPIAASEIEKILQERLFAQVRKSLQSDFELLVSRQYLERSEQTIGRRKYYQRVEKLPRWKMTENTGLQTNLSMRKQAYLAGTLRLFSFLDPNIPVLAEELADREIDEENHRVFMYVDYVVPDSSPTQDAVDEIQNQLQEIWNYDNIPPILFTYYSAHKNQVKECVVYPVCIYFMERAKYLCGYGTTPHNDINWYKYRLDRILSERIEELSWQDVRVPQILREIHDNYQLPTPKTVNTKLKEAWGCDFYKPESLMLLRFEQEFHQSYINGISIHDTFTQITYEQAVKLIQQHILNQEHRQKISQILQSRPSRDAYYQVNYRVNDYYVIRWLRALGAKVEVLLPWDLRQEMACEIKNMINLYDKS

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Crispr_ID: NZ_AP018254_37

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_37

3768301-3768408

Orphan

Consensus_repeat	Method
AATTACGTACGCGAAGCGTTGCCGCAGGCTATTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_37

>merge|NZ_AP018254|37|3768301-3768408|CRISPRCasFinder
AATTACGTACGCGAAGCGTTGCCGCAGGCTATTACGTAGCTTGCTTCCCGCGTAGCGGGTATTACAAATTACAAATTACGTACGCGAAGCGTTGCCGTAGGCTATTAC

>NZ_AP018254|37|35|3768301-3768408|CRISPRCasFinder
AATTACGTACGCGAAGCGTTGCCGCAGGCTATTAC	GTAGCTTGCTTCCCGCGTAGCGGGTATTACAAATTACA
AATTACGTACGCGAAGCGTTGCCGTAGGCTATTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096622824.1\|3777199_3777838_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375901
NZ_AP018254.1\|WP_096622805.1\|3760797_3763095_+\|ribonucleoside-triphosphate-reductase,-adenosylcobalamin-dependent	unknown	unknown	gnl\|CDD\|274169
NZ_AP018254.1\|WP_096622815.1\|3771755_3772352_-\|sulfite-oxidase-like-oxidoreductase	unknown	unknown	gnl\|CDD\|239027
NZ_AP018254.1\|WP_096622818.1\|3774434_3775412_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_AP018254.1\|WP_096622809.1\|3768687_3769275_+\|K(+)-transporting-ATPase-subunit-C	unknown	unknown	gnl\|CDD\|184447
NZ_AP018254.1\|WP_157780758.1\|3765759_3766038_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626261.1\|3764078_3765767_+\|potassium-transporting-ATPase-subunit-A	unknown	unknown	gnl\|CDD\|377138
NZ_AP018254.1\|WP_096622813.1\|3770926_3771619_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223710
NZ_AP018254.1\|WP_096622817.1\|3772448_3773900_-\|SLBB-domain-containing-protein	unknown	unknown	gnl\|CDD\|224512
NZ_AP018254.1\|WP_096622811.1\|3769668_3770445_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|179028
NZ_AP018254.1\|WP_096622797.1\|3753164_3756029_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|367112
NZ_AP018254.1\|WP_096626263.1\|3766013_3768110_+\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_AP018254.1\|WP_157780759.1\|3775702_3776038_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622822.1\|3776030_3776825_+\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|377136
NZ_AP018254.1\|WP_096622803.1\|3759848_3760433_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|274927
NZ_AP018254.1\|WP_096626259.1\|3750268_3751696_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NZ_AP018254.1\|WP_096622801.1\|3757865_3759614_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226372
NZ_AP018254.1\|WP_096622799.1\|3756711_3757842_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|372225
NZ_AP018254.1\|WP_096622795.1\|3752049_3752655_+\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|376516
NZ_AP018254.1\|WP_096622807.1\|3768420_3768612_+\|potassium-transporting-ATPase-subunit-F	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096622824.1\|3777199_3777838_-\|hypothetical-protein	gnl\|CDD\|375901	pfam18475, PIN7, PIN domain. This is a bacterial PIN-like domain of unknown function.	3.19217e-38
NZ_AP018254.1\|WP_096622815.1\|3771755_3772352_-\|sulfite-oxidase-like-oxidoreductase	gnl\|CDD\|239027	cd02109, arch_bact_SO_family_Moco, bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	6.20148e-103
NZ_AP018254.1\|WP_096622818.1\|3774434_3775412_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.35896e-94
NZ_AP018254.1\|WP_096622809.1\|3768687_3769275_+\|K(+)-transporting-ATPase-subunit-C	gnl\|CDD\|184447	PRK14003, PRK14003, K(+)-transporting ATPase subunit C.	1.67597e-88
NZ_AP018254.1\|WP_096626261.1\|3764078_3765767_+\|potassium-transporting-ATPase-subunit-A	gnl\|CDD\|377138	pfam03814, KdpA, Potassium-transporting ATPase A subunit.	0
NZ_AP018254.1\|WP_096622813.1\|3770926_3771619_+\|HAD-family-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	4.49145e-55
NZ_AP018254.1\|WP_096622817.1\|3772448_3773900_-\|SLBB-domain-containing-protein	gnl\|CDD\|224512	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis].	2.0241e-35
NZ_AP018254.1\|WP_096622811.1\|3769668_3770445_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|179028	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional.	2.35699e-101
NZ_AP018254.1\|WP_096622797.1\|3753164_3756029_-\|GAF-domain-containing-protein	gnl\|CDD\|367112	pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	2.96116e-07
NZ_AP018254.1\|WP_096626263.1\|3766013_3768110_+\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_AP018254.1\|WP_096622822.1\|3776030_3776825_+\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|377136	pfam03808, Glyco_tran_WecB, Glycosyl transferase WecB/TagA/CpsF family.	1.28096e-72
NZ_AP018254.1\|WP_096622803.1\|3759848_3760433_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|274927	TIGR04026, hypothetical_protein, PPOX class probable FMN-dependent enzyme, alr4036 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily described here is widespread in Cyanobacteria and plants, and is named for alr4036 from Nostoc sp. PCC 7120. The family consists mostly of proteins from species that lack the capability to synthesize F420, so it is probable that all members bind FMN rather than F420. [Unknown function, Enzymes of unknown specificity].	3.81138e-82
NZ_AP018254.1\|WP_096626259.1\|3750268_3751696_+\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	3.18595e-110
NZ_AP018254.1\|WP_096622801.1\|3757865_3759614_+\|AAA-family-ATPase	gnl\|CDD\|226372	COG3854, SpoIIIAA, ncharacterized protein conserved in bacteria [Function unknown].	1.26306e-123
NZ_AP018254.1\|WP_096622799.1\|3756711_3757842_+\|4Fe-4S-binding-protein	gnl\|CDD\|372225	pfam12617, LdpA_C, Iron-Sulfur binding protein C terminal. This domain family is found in bacteria and eukaryotes, and is typically between 179 and 201 amino acids in length. The family is found in association with pfam00037. LdpA (light-dependent period) plays a role in controlling the redox state in cyanobacteria to modulate its. circadian clock. LdpA is a protein with Iron-Sulfur cluster-binding motifs.	7.38286e-104
NZ_AP018254.1\|WP_096622795.1\|3752049_3752655_+\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|376516	pfam01292, Ni_hydr_CYTB, Prokaryotic cytochrome b561. This family includes cytochrome b561 and related proteins, in addition to the nickel-dependent hydrogenases b-type cytochrome subunit. Cytochrome b561 is a secretory vesicle-specific electron transport protein. It is an integral membrane protein, that binds two heme groups non-covalently. This is a prokaryotic family. Members of the 'eukaryotic cytochrome b561' family can be found in pfam03188.	1.09085e-06
NZ_AP018254.1\|WP_096622805.1\|3760797_3763095_+\|ribonucleoside-triphosphate-reductase,-adenosylcobalamin-dependent	gnl\|CDD\|274169	TIGR02505, RTPR, ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent. This model represents a group of adenosylcobalamin(B12)-dependent ribonucleotide reductases (RNR) related to the characterized species from Lactococcus leichmannii. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA. This is the rate-limiting step of DNA biosynthesis. Thus model identifies NrdJ enzymes only in cyanobacteria, lactococcus and certain bacteriophage. A separate model (TIGR02504) identifies a larger group of divergent B12-dependent RNR's. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0

>NZ_AP018254.1|WP_096626263.1|3766013_3768110_+|potassium-transporting-ATPase-subunit-KdpB
MQSLKSPPSPPMRSRDRRPPRPRSQPTVRNSYLLAVVDAFWQFNPKAVTQNPVMFLVFVAMLVMLVLTVQPSLFGHIPGNHPRLYNGLICGILFFTIWLANLTQSIASGRSKAKAKYLQSLKNHLVAKKLAADGSISEVPADSLRCGDTIYAIAGDVIPCDGEVTMGTASVDESSITGESVPILKEAGADSASSVTGGTRIIADELIIRVTANPGEGFIDRVIALLAAKKSAKTPNEIFITVLLGLFSCIFLLVTTTLVAWAIYLQVPLTVPSLIALLVSLLPTTIAGLMTTVRIAAIERVTQLNAIATSASSVEICGEINTLVLDKTGTITQGNRQAEEFIPINGHSLPELAQAALIASLFDDTTEGKSIVRLAQRLGATIDFDPKYAQAIPFSRETRISGTNLANGITVYKGAVNAIQEFTRFYHGTAATELESIYQRISEQGGTPLAVAIDNDVYGVIYLKDIIKPGIRDRLAKLRQIGVRVMMVTGDNAITAGVIAHMVGIDDFVAEATPADKFALIQSEQAAGKIVAMVGDGNDDTPALAQANVGLAMNTGTPAVKQAASIIDLDSNPTKIINLVEIGKQIITTRAALILFSLTNDIGKYLAMMPMIFVGTNLQGLNFLRLGSLNSTIFATLIYNALAIIFLSPLAFTAFNFPWDNPNKLQQCHLIIFGFGGIITPLILIKLLDLILTAVGVV
>NZ_AP018254.1|WP_157780758.1|3765759_3766038_-|hypothetical-protein
MEEISGIAFFQFADEGGYQFVFGKDDPTDLCRDDPINLCPDDPINLYPDDPTNLYPDDPTNLYPDDPINLCPDDPTNLYPDDPTGSLYCVIT
>NZ_AP018254.1|WP_096626261.1|3764078_3765767_+|potassium-transporting-ATPase-subunit-A
MGQAFLEMAIILTLIAVIAPRFGSYIAKVFEGGKSLLDPMMSPLERVIFVAAGIRHSPMMTGWQYLKALLATNILMGMLVFGLLVTQRHLPLNPMKIVGMRWDLALHTTISFLTNTGQQHYVGEKALSYFSQTSAIAFLMFTATATGLAVGIACIRGFTGQPLGNFYVDLTKAITRILLPLSLLGAIALLALGVPETFAPPLEVTTLEGVVQFIARGPVASFESIKLLGGSGGGFFAANSAHPYENPSSASNFLELMMMLLIPTALIHTYGILANQRKQSQVLFWLLVSLFVVLTGIALISESQGNPLINSRIGMEQPSLEGKEMRFGWVDSTIWSVVATTTMSGAVNSMHDSLMPGTVFSTFVGMFLRIIWGGQGMGIAYLLVLAMLAAFLMSLLAGRTPEFLGRKIEQRELQLISMTLLIHPFVILIPSAIAFIFPEAFPGISNPGFHGLSQVIYEYTSGATNNGSRLAGLASNTLWWNLTTSLCILLGRFVPIMTIILLADGMARKPQLTETEVILNSNTGLFISFTILLSIMISFLSFFPVLALGPLAEGLKMTSGIR
>NZ_AP018254.1|WP_096622805.1|3760797_3763095_+|ribonucleoside-triphosphate-reductase,-adenosylcobalamin-dependent
MVQELERNRQGVDFPESAPVANPVFFRTYSRRDAMGVRESWQKVCDRTLRGLVELGKLTTAEAALLEKMERSLKSLPSGRWLWVGGTDWIAKPQNFPGGYNCTSTNLEDWRAFGLMMDLAMMGCGTGAILEPKYINKLPVIRNQIHITLQGEIGTTPIEQRREETEIQIADGQVIIYVGDSRQGWVKAYQSLLELSTDERFDGEVQVTIDLSDVRQAGERLKGFGGVANPIKLPGLYGRCAAILNQAVGRRLNSVECCLLIDEAAVVVVAGNVRRSAGMRQGISEDTLFADAKSNLWQQDAEGNWRIDPERDALRMANHTRVFHRKPSLDECIAAVRKQYYSGEGAIQWAGEAIARANCDLLSTKQLKLEFLQAYADGQAAEWLQTKYPQIDPRELEHRLGRYGLNPCGEIIGANFFCNLAEVHLNQLDPDNHKEQEEAFTAAALSVAALLHHKFQEPRYQYSRELDPIVGVSLTGLFDFFVHAFGVEWLRWWDAGRPQTPQGLAFKHQEQEYLSRWRDIVHRVVKEYCDRHHLKCPNRCTTVQPSGTKSLLTGASPGWHPPKAQRFIRRITCRKNDPVALACLDYGYSIVPSQSDKDEDGNLLHDPFDPRCSEWLVEIPVAVSWADLPGADTIDISKFTALAQMDFYMQVQKYYTTHNTSATIELREGEVEALGTRIYEAIRDDEGYISAALLARFDDLQTFPRLPFEPISQFQYEQLMAQVEARRKTDDFYGALLKYDIGEMAEAGPAGCDSDKCMLPEQTPN
>NZ_AP018254.1|WP_096622803.1|3759848_3760433_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MVSLAPWRSSLSHALHRNRKPFARYFQLATIGMDGIPANRTVVFRGFVDGTNQIKIITDSRSQKYDQIRTRSHGEICWYFTDTREQFRIAGKLILVDKDTPTDDDFKLLRDRTWQDLSESARLQFIWPNPGKKRNPNDDFTVDPPNPNQPVDNFCLLILNPLKVDHLQLRGNPQNRYLYECDEFNNWSVVEVNP
>NZ_AP018254.1|WP_096622801.1|3757865_3759614_+|AAA-family-ATPase
MTITDDLQKLLDILPQDLQEILAQHSQLDSLVEVVLDLGRRPEARFPNGAEYLSEHPVTQAQIDICVSKVGIFGGDNRAGIEQTLHRISAIRNRTGKVIGLTCRVGRAVYGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELQKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKALPTFDIAVEMHERRRWVVHESVADTVDTLLRGRQPTPQVRTVDESGKVNITRQLTAVNGNNGHVVNGEESLVPARQPSGWRASGKMLPLQAVPNNIPNNTSYSSAQSEFDRLLDQSWNNDNDFGFTESAKSGANGEDLPLHVYPYGVSRHQLEQVINVLNLPVVLTKDIDSADTILALRSHVKNHAKLRQLAKSRHLPLHMIKASTIPQITRGLRRMLNIDEPGITDERELQLLLHNGTEDEMDALEEARLAVEQIVIPKGQPVELLPRSASVRKMQHELVEHYRLKSDSFGEEPNRRLRIYPA
>NZ_AP018254.1|WP_096622799.1|3756711_3757842_+|4Fe-4S-binding-protein
MTKLLDPSDPLHSLKAGHWFKLICGASFQHLPAVRTLTLAYAIAGADCIDVAADPAVITAAQSGLAAAAKLAPVARQRGFPPYKPPLLMVSLNDGEDPHFRKAEFDPQSCPPDCPRPCQSICPADAIAFRPPHSLGVITEKCYGCGRCLPVCPYDIIYTSSYVSTPGAVAPLVLSGEVSAVEIHTQVGRYTEFQRLWTAIEKHARRLKVVAVSCPDGEGIIEYLNFISKMILPQVGTLVWQTDGRAMSGDIGDGTTQATVKFGQKVLAANLPGYVQLAGGTNGYTVAKLRSLSLLKHNSGQSSYIAGIAYGSYARKLLSPVIHALEEREVNQTGIRKSIYLEQEPDLLWQAVELASSLVSQLKSQSQPTRISRQLP
>NZ_AP018254.1|WP_096622797.1|3753164_3756029_-|GAF-domain-containing-protein
MAQQQRPIAAEQHIISLGRVLQSLREEDNIDVLIETTIAFVKEQFDYRLIWVALYDRLNHVLVGKGGIIPNQERTLLEQHLVLSPGDLLEQVVIEQRPVGVADLRSETRIEPWQEVAKKVGIQGTIILPIRYRDRCLGILMMGSERWGYLLPGDARARLLMVLGELAAALYKYEVHWQQQNQQRIEEPLLKLLAQLQAQSSCLSRLEDAVRATHDFVTPTSTHIYWFDRNERYFVRRASSSSLTNSRLRERKGLDKITVEELSDFYYALAINETVAIGEGRSSLKSQYTAKLMERLQVRSLLAAPIFWQKDLLGFLMVESQEARIWKEGERNFVQGVAGLISLVAPLENIEATVREVQLDSQLTSEIAQGIYSDRDFANVMGKCATKTLERFAATRFILLQLDIEQNAYQIIYQSQPANRRPLTVTLEGLREVDWQLLQRSESAIGIESLEEDLRFFNWRNPLVAEGMRSQMITNCQPGESPHIILLVDCDSNRAWSIRDKDLLHRIGQQLHVVVRQWQLNNYNQQQQKIMAAFKASLRTLEQAQINALEQTNHNLEIVSLQQIAAISGCPLAVLISWTPGERYGEIIPGVNTDKRFAVKTEVTIPLRAEILVQWALAAEGLLIAKIDDIPEDTKRWLYGKEIGQVLIMALRTNPDYEPTGVVIMADRVDRRWSESTIQASEMLINQLAWSRRQKQVTQILLAAREDLQQLNWYKHRRFQELHRQSSYIINQLSELTTTNKELNSLRCHQLLRQLDTITSNIKDVLEDETWQLHIHQQKAPITSLLKRSLERVDNLLKQNRLWVGVHGLGGTGEPEGEQNYSPSFQSSLFVLGDIHKIEFILHELIVSACQRSTGSGRIDIWCRRLDERAIADSRPASLEVSITDNGVIESHLLMELHQETLSDVLAPSSLNQPPGLNLSICRHLIQKMGGELHFYQLPDGRVVSRLLLPLAIA
>NZ_AP018254.1|WP_096622795.1|3752049_3752655_+|cytochrome-b/b6-domain-containing-protein
MPQTKPYQPLIFRLLHGVNAILIIFAAITGFLVYDSWDGRFGGLGITRANRELIDYHGTFGFLIFFVALPLFLIYCIKAGRSRLIQGDTLKNWQQIGKPIWWLGLQRITNTLMLISALFAAISGKFMDENWLPLGDLTQIPYYIHLLAWLTLVITLALHILMSAKVGGSLLLLSMFDLKYRPQDSPKYWKDKLVSLFRKNN
>NZ_AP018254.1|WP_096626259.1|3750268_3751696_+|CHAT-domain-containing-protein
MKKYKLFLASFFILSLIITLIVGSVKAGVTSASYFPIISQGINPNLQSNKLPASRLDPKAFSQFLDKKDINGAVRHVELGWKQQYEEYIQGELPSNQVVEVEQIQRILRQVDIMSRLRLGKSGRKTALLYAVPTPNHLELILVKPENTPIHRRITNVKREELIQVINRFRQSITNKYSPPQEYQKTGKQLYDWLVAPVESQLESAKINNIIFCLGGGLRSLPLAAIYDGQKFLIEKYSLGIIPAFNLLDYQPDKIHQTQILAMGASEFANQSPLPAVPVELSSITSRPWQGTSLLNEEFTLENFKKQREIYPFGIVHLATHAEFSPGLIDNSYIQFWDRQIKLNEIKKLELAQPTVQLLVLSACKTALGDPKAELGFAGLAVQSGAKAAIASLWSVDDGGTLALMTQFYRQLSSTPIKAEALRQTQIVMIQRQLSLKTNPVNRGEPLPPEISPLDSLALSHPFYWAGFTVIGNPW
>NZ_AP018254.1|WP_096622807.1|3768420_3768612_+|potassium-transporting-ATPase-subunit-F
MYKNKLILFITTFIGINLISLPLANAAVGQLETKQIYAIAGLSLIVVGLFFYLFDVILRPEKY
>NZ_AP018254.1|WP_096622809.1|3768687_3769275_+|K(+)-transporting-ATPase-subunit-C
MKAIRIVLILWILTALIYPTTIFGVAQLPMFQTVANGSIRQSLDSHQPIGSSLIGQNFTSDKYFHGRPSTVRYSQGRIARPYGISGGSNLAPSNPNLFIRVMETASKLQDENIPLNSDLLYTSASGLDPHISERSARSQIERVARSRGWEPQELLPLIREYTTGKFLGIFGEAGVNVLRLNYALDLKDFDRQRRR
>NZ_AP018254.1|WP_096622811.1|3769668_3770445_-|glucosamine-6-phosphate-deaminase
MTIVQRKFRVDSLWVQVYNSEAEMAEDAADIAAKYLGEVLQQNRTARLMLATGNSQLKFLDALISNSNLDWSKIECFQLDEYLGLSSDHAASFRRYLRDRISSRVTPKAFHYIEGDTLEPLKECDRYSRLLQEQPIDLCLLGIGDNGHLAFNDPDVADFRDPHTVKLVRLDDINRKQQVVTAYFSDVSRVPQYAFTVTIPVICAAKKIICLAPGQRKTEIIQYMLEAKISEKCPASILRQQPQATLFLDTEAAKKLSQ
>NZ_AP018254.1|WP_096622813.1|3770926_3771619_+|HAD-family-phosphatase
MLSALLFDLDGTLVNTDPVHFVIWQKMLREYGMEIDETFYQNQISGGLNPEILGRILPQLSPNEIQEFAEKKEAIFREIATSLEPLPGVMEALNWGRKHKLKLGLVTNAPRANAEFMLQTLKLTDAFDLIVLAEEEAAAKPDPTPYLVALERLGVTADTAITFEDSPSGIRASVAAGIKTVGIASTHDPDKLMDLGVCMAVADFTDLKVWTLLNSLVDTDLDPQPSLLNN
>NZ_AP018254.1|WP_096622815.1|3771755_3772352_-|sulfite-oxidase-like-oxidoreductase
MLGKFFHKPQGENSDRVPPGQYLTNGFPVLTYGSTPKVDLATWEFRVWGLATPKVFTWDDFMNLPHHEFTADFHCVTRWSKLDVKWTGIKVTDFMQLIEVDPQAVHVMEHCYGGYTTNLPLEDFVREENFFAFKLFGEPIPPDHGGPMRTVIPHLYAWKSAKWINGLEFLAQEELGFWERNGYHSRGEPWAEERYSFS
>NZ_AP018254.1|WP_096622817.1|3772448_3773900_-|SLBB-domain-containing-protein
MINTRLLKLLNPAVAGILILTSIVATFSTPGFAQNPGTTRPATTANPTLDTNYTLGGGDRIRVSVFEVPEYTGEYQIPPGGAINLPLIGSVSVLGLTTEQAADIITQRYARFLRRPIISVNLLSPRPINVTVAGEVSRPGSYSLRLEGGAGNDPGVQYPTVLSAITTAQGVTMSGDITQVVLRRRVGRDREQTVVLNLKDLVQVGRQDLTLRDGDTIFVPRATTVNLAEVRNNSALSFAADPTRPRTVAVIGEVNRPGSYVVTSAVDAGQAGQGGQPNITGLPTVTRALQLAGGITARADVRQVTIRRQTRTGQAQDINVNLWQMLQGDVDQDTIVQDGDTIFVATATEVNRAEATQLATTTLSPATIQVGVVGEVKRPGPVDIKPNSTLNQAILAAGGFNDARARRQTVDLIRLNPDGSVVKREIKVDFKAGINEETNPILLNNDVVIVNRSGIAQVGDTAGAIINPIGGVLGILRAIFTGF
>NZ_AP018254.1|WP_096622818.1|3774434_3775412_-|ABC-transporter-ATP-binding-protein
MKSVTDVPNPNVDTAENPPVILTSELRKVYRTGFLLNQKLVSLSSCSLKVYQGETFGLLGPNGAGKTTLLKLLLGIIRPTSGRGLLLGKPLGDRATKAKIGYLPENPYLYDYLTGWEFLQFAAGLFKIPPRVQRQRIPELLELVGLSLGDARKKQMRRYSKGMLQRVGMAQALINEPELVFLDEPMSGLDPVGRYQMREIILRLKAAGKTIFFNSHILSEVEQICDRVGILSRGELICAGSIPELLNPKNGYFVRGQGGDWEVLQKWIPNIKFTVDGCWEGELEGDNYDFLASLRLMNANVFNMNLIRPSLEDFFIQKIQGNHQR
>NZ_AP018254.1|WP_157780759.1|3775702_3776038_-|hypothetical-protein
MFMGYFYLKIFYLNSQYLSRSAGSKELLGFFHLQRVNTPEEYFEQTQGLGYWLGDREQMIVIVCLFSPLKKVFCSNRRSQLIFANLPHCVLQVWQKLKNGNYIWLFLADWE
>NZ_AP018254.1|WP_096622822.1|3776030_3776825_+|WecB/TagA/CpsF-family-glycosyltransferase
MNKINLLNISIDNLSTLELLEKLKTGGIVFTPNVDHLMKLQKDEEFYNAYNKATYRVCDSQILVYASRFLGTKLKEKISGSDLFPAFYTYYSQDPNIKIFLLGAAEGVASAAQQRINQCVGRDIIVDSYSPSFGFEHNQVECLEIIERINRSGATVLAIGVGAPKQEKWIIQYKDKLPHIKIFLAIGATLDFEAGNKKRSPKWMSQVGLEWLHRLVSEPQRLWKRYLIEGMPFFWLIVRQKLKFYKMPFVYRHRHIHLDKIKWQ
>NZ_AP018254.1|WP_096622824.1|3777199_3777838_-|hypothetical-protein
MSANSSKTILFIDYENVQNLNFSSIQLEDIEVKIFVGQSQNKIPFELVQSIQCLGHRVEWIKIEGSGNNSLDFHIAFYLGRVSHNLSNSKFIVLSKDKGFDPLISYLKKQNIQCSRIEEISKLKQTNKSKSPNTQNSQNFPKSTDTLISKIINHLSKITQNSRPKTRSSLRQYIKSLLRSHQLGEKQIDAIIETLFSENKLSEVSNRLVYQF

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Crispr_ID: NZ_AP018254_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_38

3826895-3827008

Orphan

Consensus_repeat	Method
TGGGGAGTCGGGAATAGGGAGTGGTGGGAAAGTTAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_38

>merge|NZ_AP018254|38|3826895-3827008|CRISPRCasFinder
TGGGGAGTCGGGAATAGGGAGTGGTGGGAAAGTTAACCTTTGCTCAACGCTGATGGTGATACCGATAAAAAGGGAATGGGGAGTCAGGAATAGGGAGTGGTGGGAAAGTTAACC

>NZ_AP018254|38|36|3826895-3827008|CRISPRCasFinder
TGGGGAGTCGGGAATAGGGAGTGGTGGGAAAGTTAACC	TTTGCTCAACGCTGATGGTGATACCGATAAAAAGGGAA
TGGGGAGTCAGGAATAGGGAGTGGTGGGAAAGTTAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096626274.1\|3822029_3822404_-\|group-1-truncated-hemoglobin	unknown	unknown	gnl\|CDD\|381253
NZ_AP018254.1\|WP_096622890.1\|3835987_3836683_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622868.1\|3820691_3821549_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133016
NZ_AP018254.1\|WP_096622872.1\|3823182_3825339_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_AP018254.1\|WP_096622878.1\|3827548_3828148_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622874.1\|3825716_3826604_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_AP018254.1\|WP_096622884.1\|3833059_3833167_-\|photosystem-I-reaction-center-subunit-VIII	unknown	unknown	gnl\|CDD\|177088
NZ_AP018254.1\|WP_096622886.1\|3833529_3834225_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_AP018254.1\|WP_096622866.1\|3818875_3819154_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370166
NZ_AP018254.1\|WP_096622882.1\|3831469_3832789_+\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|223497
NZ_AP018254.1\|WP_096622888.1\|3834751_3834991_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_AP018254.1\|WP_096622870.1\|3822493_3823066_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_AP018254.1\|WP_096622876.1\|3827115_3827469_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096622894.1\|3840101_3840383_+\|DUF3288-family-protein	unknown	unknown	gnl\|CDD\|371670
NZ_AP018254.1\|WP_096622892.1\|3837075_3839532_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|214361
NZ_AP018254.1\|WP_096626272.1\|3819726_3820641_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133016
NZ_AP018254.1\|WP_096622862.1\|3814872_3816384_+\|thioester-reductase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225857
NZ_AP018254.1\|WP_096622860.1\|3813908_3814193_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|376348
NZ_AP018254.1\|WP_096622864.1\|3817243_3818638_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_AP018254.1\|WP_096622880.1\|3828628_3830998_+\|response-regulator	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096622868.1\|3820691_3821549_+\|glycosyltransferase	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	6.05724e-37
NZ_AP018254.1\|WP_096622872.1\|3823182_3825339_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_AP018254.1\|WP_096622874.1\|3825716_3826604_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	4.1133e-82
NZ_AP018254.1\|WP_096622884.1\|3833059_3833167_-\|photosystem-I-reaction-center-subunit-VIII	gnl\|CDD\|177088	CHL00186, psaI, photosystem I subunit VIII; Validated.	2.41082e-08
NZ_AP018254.1\|WP_096622886.1\|3833529_3834225_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	2.08522e-84
NZ_AP018254.1\|WP_096622866.1\|3818875_3819154_+\|hypothetical-protein	gnl\|CDD\|370166	pfam08872, KGK, KGK domain. This presumed domain is found in one or two copies in cyanobacterial proteins. It is named after a short sequence motif.	1.281e-05
NZ_AP018254.1\|WP_096622882.1\|3831469_3832789_+\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	1.40968e-80
NZ_AP018254.1\|WP_096622888.1\|3834751_3834991_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.00491e-13
NZ_AP018254.1\|WP_096622870.1\|3822493_3823066_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	4.00298e-09
NZ_AP018254.1\|WP_096626274.1\|3822029_3822404_-\|group-1-truncated-hemoglobin	gnl\|CDD\|381253	cd00454, TrHb1_N, truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 1 (N). The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. They are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). Typical of the TrHb1s (N) group is a protein matrix tunnel. It includes a Mycobacterium tuberculosis TrHb1, Mt-trHbN, which is encoded by the glbN gene. Mt-trHbN is expressed during the Mycobacterium stationary phase, and plays a specific defense role against nitrosative stress. The cyanobacterium Synechococcus sp. PCC 7002 TrHb1 GlbN, is constitutively expressed, and likely also protects cells from reactive nitrogen species.	5.49686e-45
NZ_AP018254.1\|WP_096622894.1\|3840101_3840383_+\|DUF3288-family-protein	gnl\|CDD\|371670	pfam11691, DUF3288, Protein of unknown function (DUF3288). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	2.56183e-44
NZ_AP018254.1\|WP_096622892.1\|3837075_3839532_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
NZ_AP018254.1\|WP_096626272.1\|3819726_3820641_+\|glycosyltransferase	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	9.24603e-34
NZ_AP018254.1\|WP_096622862.1\|3814872_3816384_+\|thioester-reductase-domain-containing-protein	gnl\|CDD\|225857	COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	3.07001e-120
NZ_AP018254.1\|WP_096622860.1\|3813908_3814193_+\|acyl-carrier-protein	gnl\|CDD\|376348	pfam00550, PP-binding, Phosphopantetheine attachment site. A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of the anguibactin system regulator AngR has the attachment serine replaced by an alanine.	1.54759e-09
NZ_AP018254.1\|WP_096622864.1\|3817243_3818638_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_AP018254.1\|WP_096622880.1\|3828628_3830998_+\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.19279e-85

>NZ_AP018254.1|WP_096622874.1|3825716_3826604_-|cation-transporter
MLQDNRSVVRRVLVITLLLNIFVLGLKLFVGMLTGSLSLIADALHSVTDSANNILGLITNQFASPFPDREHPYGHRKFEAVGALGIAAFLGVACFEILQGAVERIISGENQVKVSPSELWILLIVLGVNIFVAVYERWVGKRIGSPILVADAIHTMSDVWVTIGVIGGLIGVWLGYRWLDIAIAFPVALMVFWSGWHVIRQNLPWLVDQMAVPPEEIYEIVIAVPGVVNVHDIASRGLRGRQVFMEMHLIVDTDDVNTAHQITELVEQKLAEKYSPVRILIHVEPPTYRSDQISF
>NZ_AP018254.1|WP_096622872.1|3823182_3825339_+|polyribonucleotide-nucleotidyltransferase
MGEFEKSISFDGRDIRLKIGLLAPQAGGSVLIQSGDTAVLVTATRSTAREGVDFLPLTVDYEERLYAAGRIPGGILRREGRPPEKAILTSRLIDRPLRPLFPSWLRDDLQIVALTLSMDELVPPDVLAVTGASIATLLAKIPFNGPMAAVRVGLVGDDFIINPTYAEIESGDLDLVVAGSPDGVIMVEAGANQLPELDIIEAIEFGYEAVQDLISAQNDLIAELGIEIPPLEPPEEDATLDNFISDRATEAIKKILSQFDLTKSERDAALDEVKAAVEAEIEQLAEDDPVRVAASADSKAVGNTFKSITKNLMRKQIIEDNVRVDGRKLDEVRPVSCQVGIIPRRVHGSGLFNRGLTQVLSVCTLGTPGDAQNLTDDLQPDQEKRYMHHYNFPPFSVGETRPLRAPGRREIGHGALAERALLPVLPPKSAFPYSLRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIIKPVSGAAMGLIKEGDEVRVLTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKISGLSMDVIAKAIHQAKDARLHILEKMLACIDKPRTEMSPYAPRLLTLKIDPDMIGLVIGPGGKTIKGITEETGSRIDIDDDGTVTISAVDESKARRARNIIQGMTRKLNEGDVYVGRVTRIIPIGAFVEFLPGKEGMIHISQLADYRVGKVEDEVSVGDEVIIKVREIDSKGRINLTRLGIHPDQAAAAREAAEVNR
>NZ_AP018254.1|WP_096622870.1|3822493_3823066_+|GNAT-family-N-acetyltransferase
MQLPIYHTLKNNTTIELDRMHTEEIEAVRQLFNRIVLEGTTYPQNQPLSPSEFATYWSNYDGFVVRTKDTSVIPRIIGAFFIKPNFPGRCSHICNAGFIVAENWRGLGLGQWMGESMLKLAGDLGYEAVMFNLVFATNIPSLRLWESLGFMVLGKIPQAVRFEDGKMVDAVMMYRKLDNRIVSQDESNLS
>NZ_AP018254.1|WP_096626274.1|3822029_3822404_-|group-1-truncated-hemoglobin
MNTLYEKLGGAEAVDLAVEKFYEKVLADERVQRFFAHTDMQQQKRHQKAFMTYAFGGAEHWNGRPMRDAHRQLVTEMGLTDTHFDAIAENLVATLVELKVPQALIDEVVQIVGSVAHRNDVLNR
>NZ_AP018254.1|WP_096622868.1|3820691_3821549_+|glycosyltransferase
MKLSVIIPCYNCVAYIATQLEAFTQQEYSQPWELIVADNGSTDGTLEVVKQYQERLPNLRVVDASGGKKCAAYPRNRGAEVAKGELLAFCDADDQVTPGWVAAMGEALSKYDFVVGNSDYTKLNLPWVVKACAYREANGVNDNPYYPYAAGNNIGVKREIYQAVGGFDEEIPILDDVDFCWRVQALCGVKLTEVPEAKIYFRFRETIDRMYQRWFGIAESNILLLGRHGLSYGWGNLCRDLVMLGVRFPIKILSRATFARWMMDLGWFLGTVNGMWKYRHGRSQS
>NZ_AP018254.1|WP_096626272.1|3819726_3820641_+|glycosyltransferase
MQLSVIIPCYNCAEYIGTQLEAFAHQEYSQPWEIIIADNGSTDNTLEIVRQYQQKMPHLRIVDASGGKKCAAYPRNIGAQVAKGEALAFCDADDEVFPGWVAAMGEALSKYDFVAGKSDYTKLNLPWVVAACAYREGNGVNDNLYYPFAGGNNIGIKRHLFYRVGGFDEDIRIIDDVDFCWRVQAQCGVKLIEVPGAKINFRFRDTIKEMYQRWYGIAENNILLLRRHGLKYAWKNLFRDFVMLVARLLIKVRSRVSFARWMMDLGWFLGTVHGMWKYRHVRSQVMARKKLPHQLVASHVMTDR
>NZ_AP018254.1|WP_096622866.1|3818875_3819154_+|hypothetical-protein
MALDLDDLDVLCADIRNNNNYLKVGNAGKVKDFKDVVLSYIQEPVNKLFRDGYPCEILKPGFDWQEGTIKARIVFEFERYQDEDEDVDNEGE
>NZ_AP018254.1|WP_096622864.1|3817243_3818638_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MSQNFVTTGTIAAIATAIVPQQGSVGIVRMSGTEALNIAKRLFTAPGKQVWESHRILYGYVRHPQTQEVIDEVLLLIMLAPRSYTREDVVEFHCHGGIIAVQRVLQLCIAEGARLAQPGEFTLRAFLNGRIDLTQAESIADLVGAKSPQAAQTALAGIQGKLAQPIRELRQQCLDILAEIEARIDFEEDLPPINLDNIFADITKIANQVKYILTTADRGELLRTGLKVAIVGRPNVGKSSLLNAWSRSDRAIVTDLPGTTRDVVESQLVVGGIPIQVLDTAGIRETEDTVEKIGVERSRQAAEAADLILFTIDASQGWQAADGEIYQQVQHRPLILVINKVDLIDQEKKELIFANLPEFRQKIYTVAAKNQGIDELEQAILATVKSDKIQAANMDIAINQRQAAALIKTQKSLEQLQNTIKQDLPLDFWTIDLRDAIYALGEITGEEVTESVLDRIFSRFCIGK
>NZ_AP018254.1|WP_096622862.1|3814872_3816384_+|thioester-reductase-domain-containing-protein
MISPKQSLNAHEIQTWMVSKLAELLNVDTSEIDIHQPLEDYGLDSSRAMLIVTQAEKIFGVEISPTMLWHYPTIAALSQRLAEDVEETNLVGNVINPNLAKIADTSLDLQAEVVLDPRIYPPSTSFVFNPHPTAVFLTGGTGFLGAFIIRELLTQTQADIYCLTRGKTIEEGKNKLQKNLAQYYIWNENLSHRIIPVLGDLSQPLLGMDEVEFTKLGNTIDGIYHSGAMLNYVFPYAAMKPTNVLGTQEILRLACTGKLKPVHLVSSVAIFESDYYAGKVVKEDDEFDHWEGIFLGYSQTKWVAEKLVKLGYSRGIPITIHRPPLIAGDSQTGVCNTDDFINLAIKGCLQMGCFPDVNYMLDISPVDYVSKSIVYLSLQQKSLGHAFHLQHPEPVPFMDMVKWLQSFGFPIEIIPYEEWQNRLTTELVTPENPLYTLRPFLLERWSKDKLTVPDLYLNAHRPQISCAATQQALAESSIRCAPLDSKLFITYSSYLIQNGFLEV
>NZ_AP018254.1|WP_096622860.1|3813908_3814193_+|acyl-carrier-protein
MQSDPPRTAAEIEKYLTFVVADALGVNPQTIDVNQSWDNYEINSQQGMKIALQVGEYLGLKLSPTILWYYPSINLLAQRLADEFTHEKSEKYLI
>NZ_AP018254.1|WP_096622876.1|3827115_3827469_+|hypothetical-protein
MDSPRLTLNLENGSVSLAIPSDAVKEIKTALDGLINSLKIISATNTGTSKKPSPQPVMEYRHVSGVFLELFCNPNIWPTPFAAKVLLTIRDQQIKLTTEAELTRVVEDVNQYLEQNS
>NZ_AP018254.1|WP_096622878.1|3827548_3828148_-|hypothetical-protein
MAKRWLRKGVISTISAIALLAIEMVSVSATTTVIKGQTLHELCTTFPLNSQCQDFEAIPLSKRGGTTANCSFNSNNVEIQGECKIQVDQEGLLIHQEAGEGSSRWVRITPQKFNSFVYEDIEIDNVEKTLINYFLFGIAGAASTPKIKLAKIEINYNSQHRNTSTLVVIIGRDKGSELRSQLEKLTTPQVNTPAIPPQP
>NZ_AP018254.1|WP_096622880.1|3828628_3830998_+|response-regulator
MKILVVEDDNSIAELLAEILTNQIYAVEIVADGKSALELIQAYDYDLIILDVNLPELDGLSVCRQVRQSGKQMPILLLTGCASSHEKAIGLDAGADDYIVKPFEQEELVARIRALLRRSTSLAQPILTWGELHLDPTSCEVTYAKQVLSLTPKEYALLELFLRNTRRVFSCGMILEHLWSYDDTPGEEAVRTHIKGLRQKLKAVGAPANLIETVYGIGYRLKPVENEHHQQNTEKAQNTNLNQKNGKVGQGEVENAIYQESHSAIAQIWQRHQPRVQEQLAVLTQTVTAAQNQQLSPQLQNTARQEAHSLAGSLGTFGIGNGSIIARQIETILQSHQDFSTQEVAHLSDLVDQLHQEINQHITLTDSPTSNSTQQLIVMVIENHHQQQTSLATTINTTTLQTKLEQEIATMVVSDLETARRGLYQKHPNLVVVDSTISHNQTELANFISECDARKPSVPVVIIGNQSETEILLHSVRNNRHRFIETPVTPESLNTAVQKMLQLTLSAEAKVLIVDDDKSLGAAVQILLQPWGLNVTVLTQVQQFWETLETVAPDLLILDVEMPEKNGIEICQEVRNHPYWSELPIVFLTVHNDAATVNQVFSAGADDFVCKPIIGPELVTRIINRLERVKIWKNLTETDPLTKLANRHKAQQELAKLISLSRRYGHCLCLVVLDIDNFQQINLQQGKESGDRILREIASHLLAEFRLEDVVSRWGGDEFVIGLYGAGRDEGYACIMKALAGLEELGITFSGGIAEFPDDAQTLEVLYQTASSAMKIAANLGGNTIIRNS
>NZ_AP018254.1|WP_096622882.1|3831469_3832789_+|exonuclease-SbcCD-subunit-D
MLKILHLSDIHMGSGFSHGRINPETGLNTRLEDFVQTLSRCIDRALSEPVDLVLFGGDAFPDATPPPYIQEAFASQFRRLVDAQIPTVLLVGNHDQHSQGQGGASLCIYRTLGVPGFIVGDTLTTHVIQTRNGPVNVITLPWLTRSTLMTRQESEGMSLSEVNHLLTERLQVVLEGEIRRLDPQIPTILLAHLMADNATLGAERYLAVGKGFTLPLSLLTRDCFDYVALGHVHRHQNLNRHNNPPVIYPGSIERVDFSEEKEDKGYVLVEIDNGQVNWEFHPLPVRVFRTIEVDVSKQEDPQTAILKAIAKHDITDAVVRLIYKLRSEQLDLIDTPALHQALKSAHTYTIQPELISQLARPRVPELSAYNSIDPMEALQKYLNNREDLKDISQLMLEAAQNLMSTADENWDEPANNDSETSPEDRDNPVAAIDLQLKLL
>NZ_AP018254.1|WP_096622884.1|3833059_3833167_-|photosystem-I-reaction-center-subunit-VIII
MAASFLPSILVPLTGLVFPAVTMAFMLLYMESDSI
>NZ_AP018254.1|WP_096622886.1|3833529_3834225_+|molybdopterin-dependent-oxidoreductase
MTTRRQFLQLTGISSLGMVLGGCGTPIGEDIVGTLTMPLNEKLESWIFRPQKLVPEFSPSQIEPKALIVNTFRNTPIIPPDEYRLIIDGEVNQPLSLKLTEIQALPLTSMIIRHVCVEGWAAIVQWGGVRLRELIAIAQPKPSVKYVYFTSADGYYSSWDIASAVHPQTLMAYQKNGEPLPIENGAPLRLAAPIKLGYKQSKWVTRITLVSQLFRYRGYWEDMGYEWFAGI
>NZ_AP018254.1|WP_096622888.1|3834751_3834991_+|helix-turn-helix-transcriptional-regulator
MNIPKKLVIKQPEIGNLIRELRQQTGLTQEQFAAVLGFTFPTINRWENGRNQPSPVAMKQIEKILQDMGDRGQELLTKY
>NZ_AP018254.1|WP_096622890.1|3835987_3836683_+|hypothetical-protein
MRRKRSFKSHRPQQNLDSFLDILTNTVGVLMFISLFITLVAVQSSTIVRTPLVNQSDKRANFFEIRGNRVIYLDNKSATQQIEDFISNLPTCVEPSSSYLDTYSYLDELRSYNNCVAEKIQQLKNFRAETKNYEIELVNLKSMSWKYNPKSTTGGESGTELAQPNSEYQKILAQLDLQKDYLAFLVRPDSFSTFRQARQIAWKADFDVGWEPQTPESEIIFGSGGRAVGVQ
>NZ_AP018254.1|WP_096622892.1|3837075_3839532_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MFEHFTSQAIRVIMLAQEEARRLGHNFVGTEQILLGLIGEGQGVAAKVLGDLGITLKDARREVEKIIGRGSGFVPPEIPFTPKVKSLFEQAFKEARTLGNNYISTEHLLLGLTESGEGVAAKVLQNLGIDMKEVRKMVIRRLGEDLATVAPKSGGGSARRNQQNPTLEEFGKNLTKLAEQGQLDPVVGREKEIERTIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDVPEILLEKQVISLDMGLLVAGTRFRGDFEERLKKILEEIRSHGNIILVIDEIHTLVGAGGIEGGMDAANILKPALARGEIQCLGATTLDEYRQHIERDAALERRFQPIMVGEPSVEETIEILYGLRGIYEQHHRVTITDEALFAAAKLSARYISDRFLPDKAIDLIDEAGSRVRLRNSQHAASREIKRELLQVAKEKENAVRIQDFDKAATLRDRELDLEAQLQAESENFTSTPCVDEEDIAQIVAAWTGVPVNKLTESESEMLLHLEDTLHQRLIGQELAVNAVSKAIRRARVGLKNPNRPIASFIFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLVGSPPGYVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILDDGHLTDSKGRKVDFKNTLIILTSNIGSKVIEKGGGGIGFQFEDEAEASYNRIRNLVNEELKAFFRPEFLNRLDDVIVFTQLKKDEVKQIAEIMLKEIAGRLTEKGITLEVTERFKERVVEEGYDPSYGARPLRRALMRLLEDSLAEAMLAGKIGDGDRAVVDIDENGQVVVNQSSHKELAIAQAG
>NZ_AP018254.1|WP_096622894.1|3840101_3840383_+|DUF3288-family-protein
MNKEQQHPQYSQDSIAVASLFQEGPTDLNLAELARLRIRYQGFPGARDIQAKLDQIMEMWELNEEELFQKTRAIHEAGGIYESRGKKEEQDWS

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Crispr_ID: NZ_AP018254_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_39

3946065-3946181

TypeV

Consensus_repeat	Method
CAAGTAAAAGCTCTTTTTATTGCCGAACTCATTCCTACTC	CRISPRCasFinder

1 spacers

Cas14c_CAS-V-F

The CRISPR arrays of NZ_AP018254_39

>merge|NZ_AP018254|39|3946065-3946181|CRISPRCasFinder
CAAGTAAAAGCTCTTTTTATTGCCGAACTCATTCCTACTCGCTGCTTGGGAACACTTAGGTTTTCCGCACGAGGAGACAAGTAAAAGCTCTTTTTATTGCCGAACTCATTCCTACTC

>NZ_AP018254|39|37|3946065-3946181|CRISPRCasFinder
CAAGTAAAAGCTCTTTTTATTGCCGAACTCATTCCTACTC	GCTGCTTGGGAACACTTAGGTTTTCCGCACGAGGAGA
CAAGTAAAAGCTCTTTTTATTGCCGAACTCATTCCTACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096623024.1\|3938555_3939347_-\|HesA/MoeB/ThiF-family-protein	unknown	unknown	gnl\|CDD\|238386
NZ_AP018254.1\|WP_096623050.1\|3952733_3953894_-\|GNAT-family-N-acetyltransferase	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623056.1\|3958723_3959566_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|170047
NZ_AP018254.1\|WP_096623034.1\|3941716_3943036_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	unknown	unknown	gnl\|CDD\|237722
NZ_AP018254.1\|WP_096626295.1\|3937843_3938215_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|272875
NZ_AP018254.1\|WP_096623042.1\|3946808_3948071_-\|MltA-domain-containing-protein	unknown	unknown	gnl\|CDD\|225377
NZ_AP018254.1\|WP_096623044.1\|3949275_3949980_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_AP018254.1\|WP_096623030.1\|3940009_3940486_-\|NifX-associated-nitrogen-fixation-protein	unknown	unknown	gnl\|CDD\|367430
NZ_AP018254.1\|WP_096623052.1\|3956311_3957490_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14c_CAS-V-F	-	gnl\|CDD\|223747
NZ_AP018254.1\|WP_096623048.1\|3951833_3952637_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_AP018254.1\|WP_096623026.1\|3939339_3939675_-\|nitrogenase-stabilizing/protective-protein-NifW	unknown	unknown	gnl\|CDD\|184508
NZ_AP018254.1\|WP_096623040.1\|3946205_3946520_-\|glutaredoxin-3	unknown	unknown	gnl\|CDD\|239510
NZ_AP018254.1\|WP_096623046.1\|3950007_3951618_-\|carboxylate-amine-ligase	unknown	unknown	gnl\|CDD\|375554
NZ_AP018254.1\|WP_096623022.1\|3938322_3938532_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623028.1\|3939674_3939884_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377451
NZ_AP018254.1\|WP_096623036.1\|3944145_3944820_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_AP018254.1\|WP_096623054.1\|3958290_3958671_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_AP018254.1\|WP_096623038.1\|3945173_3945854_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_AP018254.1\|WP_096623032.1\|3940772_3941171_-\|nitrogen-fixation-protein-NifX	unknown	unknown	gnl\|CDD\|131711
NZ_AP018254.1\|WP_096626297.1\|3949050_3949266_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096623024.1\|3938555_3939347_-\|HesA/MoeB/ThiF-family-protein	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	2.80858e-93
NZ_AP018254.1\|WP_096623056.1\|3958723_3959566_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|170047	PRK09687, PRK09687, putative lyase; Provisional.	4.49258e-74
NZ_AP018254.1\|WP_096623034.1\|3941716_3943036_-\|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	gnl\|CDD\|237722	PRK14476, PRK14476, nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional.	0
NZ_AP018254.1\|WP_096626295.1\|3937843_3938215_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	9.44525e-47
NZ_AP018254.1\|WP_096623044.1\|3949275_3949980_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.04097e-89
NZ_AP018254.1\|WP_096623030.1\|3940009_3940486_-\|NifX-associated-nitrogen-fixation-protein	gnl\|CDD\|367430	pfam03270, DUF269, Protein of unknown function, DUF269. Members of this family may be involved in nitrogen fixation, since they are found within nitrogen fixation operons.	5.83478e-73
NZ_AP018254.1\|WP_096623048.1\|3951833_3952637_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	3.79623e-105
NZ_AP018254.1\|WP_096623026.1\|3939339_3939675_-\|nitrogenase-stabilizing/protective-protein-NifW	gnl\|CDD\|184508	PRK14102, nifW, nitrogenase-stabilizing/protective protein NifW.	1.67503e-52
NZ_AP018254.1\|WP_096623040.1\|3946205_3946520_-\|glutaredoxin-3	gnl\|CDD\|239510	cd03418, GRX_GRXb_1_3_like, Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including E. coli GRX1 and GRX3, which are members of this subfamily.	1.01612e-43
NZ_AP018254.1\|WP_096623052.1\|3956311_3957490_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.26305e-49
NZ_AP018254.1\|WP_096623042.1\|3946808_3948071_-\|MltA-domain-containing-protein	gnl\|CDD\|225377	COG2821, MltA, Membrane-bound lytic murein transglycosylase [Cell envelope biogenesis, outer membrane].	4.22783e-112
NZ_AP018254.1\|WP_096623028.1\|3939674_3939884_-\|hypothetical-protein	gnl\|CDD\|377451	pfam05082, Rop-like, Rop-like. This family contains several uncharacterized bacterial proteins. These proteins are found in nitrogen fixation operons so are likely to play some role in this process. They consist of two alpha helices which are joined by a four residue linker. The helices form an antiparallel bundle and cross towards their termini. They are likely to form a rod-like dimer. They have structural similarity to the regulatory protein Rop, pfam01815.	3.90782e-25
NZ_AP018254.1\|WP_096623036.1\|3944145_3944820_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.79486e-10
NZ_AP018254.1\|WP_096623054.1\|3958290_3958671_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	1.82188e-24
NZ_AP018254.1\|WP_096623038.1\|3945173_3945854_-\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	8.02071e-22
NZ_AP018254.1\|WP_096623032.1\|3940772_3941171_-\|nitrogen-fixation-protein-NifX	gnl\|CDD\|131711	TIGR02663, Protein_NifX, nitrogen fixation protein NifX. Members of this family are NifX proteins encoded within operons for nitrogen fixation in a number of bacteria. NifX, NafY, and the C-terminal region of NifB all belong to the pfam02579 and are involved in MoFe cofactor biosynthesis. NifX is a nitrogenase accessory protein with a role in expression of the MoFe cofactor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation].	1.27311e-58
NZ_AP018254.1\|WP_096623046.1\|3950007_3951618_-\|carboxylate-amine-ligase	gnl\|CDD\|375554	pfam18105, PGM1_C, PGM1 C-terminal domain. This is the C-terminal domain found in PGM1 present in Streptomyces cirratus. PGM1 is a gene product that links precursor peptides together to form the antibiotic Pheganomycin.	1.09635e-07

>NZ_AP018254.1|WP_096623038.1|3945173_3945854_-|Uma2-family-endonuclease
MTIAPELETVQGIQEDVILLPTDLLSDEPPLETELHLRQIILLLECLEWLWRDRNDFYVAANLSIYYSTHKIKNRDFCGPDFFVVLNTERKVRKSWIVWEEDGKYPHVVVEILSDFTASVDREGKKQLYQDIFRVHDYFWFDPYSLEFAGFHLVDGKYQPLEPHSQGHLWSHQLGLYIGIHQGLLRFFTPDGELVPTPEETAIQECDRANRLAAKLRELSIDPNNI
>NZ_AP018254.1|WP_096623036.1|3944145_3944820_-|HEAT-repeat-domain-containing-protein
MSQQPIEQIEISLRASELNLRKNALDELGKFSADVAIPVLQRLSQEPDFALRRLAVMGLGNHRTNESFQALQRIIEKDEDANVLAEAANSIFEFGEQAIPVLSGLFKRSQNWLVRQTVISLLVETTSYADLLEIAKIAITDPTQTVKEAGILALGQILKSPLQQQALEILTQLSYSPDWRTRWRVAIALQHSQAPQAKQLISQLQQDEHYRVVAAALEVATGNN
>NZ_AP018254.1|WP_096623034.1|3941716_3943036_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN
MAIVVNPNKPVVVNPLKLSQPLGATLAFLGLKGVIPLLHGSQGCTAFAKVILVRHFREVIPLSTTAMTEVTTILGGEENIETAILTLVEKVKPEIIGLCTTGLTETRGDDMEGILKDFRKKHPELAYLPIILVSAPDFKGSLQDGFAAAVEAIVKQMPVYGETIPNQVTILAGAAFTPGDVQHIKEIVRDFGLNPIVVPDLSTSMDGHLGDDWSPITVGGTTTEELRQIGRSAFAIALGESMRGAASILEERFNIPFEVFHELTGLHPVDEFMQALSDLSGVSVPHKYRHQRRQLQDAMLDTHFYFGRKRISLALEPDLLWSTVLFLQSMGAEIHTAVTTTRSPLLEHLPVEKVVIGDYEDFSNFAQGSDLLIGNSHAAPISRSLGIPLFRQGIPIFDRLGNGQACKVGYRGTMEILFEIGNTLLETEEGKARDLNYEM
>NZ_AP018254.1|WP_096623032.1|3940772_3941171_-|nitrogen-fixation-protein-NifX
MKIGFTTSDQKHINAHFGWAKMIDIYEVSEDGYEFLETRKFEGDLRQDGNEDKIQPKLEALEDCTIVYVTAIGGTAAAKLIKKGVTPVKAKSESDEINVVLERLVQTLKGSPPPWLRKALQKGKSFSEELEE
>NZ_AP018254.1|WP_096623030.1|3940009_3940486_-|NifX-associated-nitrogen-fixation-protein
MSDKNTSKSEVSAEVLTSPFLQAIIKQIRGQDTYGTYRQWSDDLLLKPFIVTKQKKREIPVDGEIDPMTVSRIMIFYRAIAGCIEAETGLLSQVVVDLGHEGFGWALVFSGRLLLVTKTLRDAHRFGFDSLEKLAEEGEKLIAKGIELAQKYPEVGKL
>NZ_AP018254.1|WP_096623028.1|3939674_3939884_-|hypothetical-protein
MSEAVTIEELKMQIKRLNSKAGQMKMDLHDLAEGLPTNYQQLMDVAAQTYAIFHQLDELKQQLKRMEQK
>NZ_AP018254.1|WP_096623026.1|3939339_3939675_-|nitrogenase-stabilizing/protective-protein-NifW
MSASLDEFKQLVDAEEFFQFFNLPYDPKIVNVNRLHILKKFSLYIQEIDANQPGLSSAEKLSQYCQALQNAYATFVDSNAQEQKLFKVFNQKPKNVVTLTEITSDSEVESD
>NZ_AP018254.1|WP_096623024.1|3938555_3939347_-|HesA/MoeB/ThiF-family-protein
MIELTPTDLERYRRQITLPNFGELAQKRLKSAKVLVTGVGGLGGTAALYLAVAGVGRLILVRGGDLRMDDMNRQILMTDDWVGKPRVFKAQETLQRINPDIEVEAVFDYITPENVDSLVQSADMALDCAHNFTERNLLNEACVKWRKPMVEAAMDGMEAYLTTIIPGVTPCLSCLFPEKPDWDRRAFSVLGAVSGTLACLTALEAIKLITGFSQPLLSQLLTIDLNRMEFAKRRSYRDRACPVCGNTAPWRYSQSSPMESANK
>NZ_AP018254.1|WP_096623022.1|3938322_3938532_-|hypothetical-protein
MLILAIILLILALFCASIAYNSTMEFMQITSIVMALGCLGLSVLFSPVPMEIAILITLSIVIPKSSHLL
>NZ_AP018254.1|WP_096626295.1|3937843_3938215_-|iron-sulfur-cluster-assembly-accessory-protein
MTVTLTEKAEFRLRELLLGSNPKTSKPTKGIRLSAKGGGCNGYEYGMEVTSAPKPDDMVIEQGQVQIYVDANSITLLEGMVIDFVEGVMESGFKFTNPNAKDTCSCGKSFSAGDCTPQGTPCK
>NZ_AP018254.1|WP_096623040.1|3946205_3946520_-|glutaredoxin-3
MFDVLNSLLGRHPEQIKANVEIYTWQTCPYCIRAKMLLWWKGVKFTEYKIDGDETARAKMAERANGRRTVPQIFINQKHIGGCDDIYALDTKGQLDPLLQQAPI
>NZ_AP018254.1|WP_096623042.1|3946808_3948071_-|MltA-domain-containing-protein
MFWKQQVAIFSAIILGIPVFITVYLLQLPSLGHLKLAAPECRLQKWRLPTNSTSTTPSVLIPRPAITFCSQDQSCLDTQLWGDSQTPGDKTALIQSIDRSLTYLNTPRAETAYKNYPISGITLPRTIKSLQRFRQLVQISRSPQELNSYIAQEFQLYQSIGSDRNGSVLFTAYYEPVYQASRTPTPEYKYPIYRRPPDLEKWPRPHPTRIELEGADGLQASRSKLRGLEIFWFRDRMEPILIQIQGSAKLKLTDGRETHVGYAGNTRHNYQSIGRALADDGVIPLEEVTMPAILEHFRRKPQDLNVYIPRDPSFVFFQENPGIPATGSIGVQLTADRSIATDKSLMPPGGLALIRGYIPVITPGGKLQSQVISRFVLDQDTGGAIKTPGRVDYFVGTGKVAGDRAGITKGRGQLFYLFLK
>NZ_AP018254.1|WP_096626297.1|3949050_3949266_+|hypothetical-protein
MEGTKKAICSNWKTTVIGIVLSFTGFVAFSPNTFGGEQSVLVQLCRYITSGGLAVLGVSAKDFNVSGGDKE
>NZ_AP018254.1|WP_096623044.1|3949275_3949980_-|response-regulator-transcription-factor
MDILIIEDEPEIAGLIQRNLEKEGFTCRIAKDGNQGLQEFDHQPPDLIILDLLIPGIDGLEVCARIRQQPGNKDPYILMLTARGEEIDRVIGLSTGADDYMVKPFSPRELVARVRALLRRSMRQTARLPHIYHTPHFTIDMEKRTATRQDGENQVEALDLTALEFELLSTFIGHPGRVWNRSQLIDKLWGDNFFGDERVVDTHIARLRKKIEFDSANPQFIKTVIGVGYRFEDG
>NZ_AP018254.1|WP_096623046.1|3950007_3951618_-|carboxylate-amine-ligase
MQILDHGITHLNTSDRFHQLQLMLRDRWRTIDMFDHSDADILVVPSLSLDQREIEKVEGFEHYEERLLFSLIRLRNPRTRLIYVTSKPLHPSIIDYYLQLLSGIPFSHARNRLLLLSTYDASPKPLTEKILERPRLIERIRQALRLEKSFMACYNATQLEAELSVKLGIPLYAASPELQIWGTKSGSRQIFAEAGVPHPDGSKLVWNVDDLAVAAAELWERQPSLQRMVVKLNEGISGEGNALLDLRPIADYAPHRVSQIGTIAAIHKSFPEMRFQAHQETWQNFGSRIPELGAIVEAFVEGEIKRSPSVQGRITPSGEVEILSTHDQILGGPDGQIYLGCRFPADESYRLQLQELGIKIGNNLAEKGALERYGVDFITVDKGNGEWDIQAIEINLRKGGTTHPFMTLKLLTNGSYDLKTGLFLSQHGCPKYYIATDNLQNRKYCGLLPNDLMDIIAHHRLHFNSGAETGSVFHLMGCLSQFGKLGLTSIGDTPEQAQEIYDRVQEVLDIESCNPPDEFTAFSEYVYSVDWMGCSL
>NZ_AP018254.1|WP_096623048.1|3951833_3952637_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKTDSIFYRLFQEFPSIFFELIGYSPEIASEYQFSSVEIKQTAFRIDGVFIPQSQEQPIYFVEVQFQEDLGIYSRLFTEINLYLRQNKPENDWFAFVIYPSRNIDTASTIHYRESFASGRITIIYLDELGEVASLPIGVATIKLIIENQNRAIESARELITRTNQEVETGQQQQQLLQIIETILVYKFPTMEIEEIQEMFGLSELKQTRFYQQAFAEGEQKGRQEGRQEGKLLAVPPMLAAGLTIEQIAEALELSVDDVRKAAQQSE
>NZ_AP018254.1|WP_096623050.1|3952733_3953894_-|GNAT-family-N-acetyltransferase
MALPVKLYDSNHIDEFNFNRDNTQHSQLIAAYFIPMMKLGSLPFIQNVNTQLYLLTAGNLTLPVTVNDLELENCYVCSPYNHYITYTKVELTNLKNPFLETTIAHILDLLGIFAAQAQINRVVIVNNLLLSTNLYPPISTQEIQAITTFLCQKFPNHAIMFRSINTFVDNELMHGFQTNNYHLIGSRQIYLFNPADKSLRRSKMRSRLKQDTQLIHKHGYTVLDKSAITAEDIPRIVELYNLLYLEKYSYHNPQFTVEFIKLTLQNPAWCFQILKKDHRIDGVIGYYHVNNMMTTPILGYDTQLPQEIGLYRMLSALLTNTAKTEKMILHQSSGAASFKRLRGFLPNIEYSAVYISHLPWWRKIIWLILKLLVNKLAIPLMQKYKL
>NZ_AP018254.1|WP_096623052.1|3956311_3957490_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MLVLEAKLKGKESQYGLLDEAIRTALFIRNKALRHWIDNKDVSKNDLQKLCAVLAKEFDFAGKLNSMARQASADRAWCAIKRFYDNCKAKKPGKKGYPRFKKRGHSVEYKTSGWAISADKKYITFTDGFKAGKFQLVGTRDFSFYSTKQIQRVRVVKRADGYYCQFCVDAERKEQHQHNGKQVGIDVGLEFFYTDSDGKTVENPRFLRKSEKSLKRKQRKVSRCKKGSSNRRKAVKKLAKKHLKVSRQRKDFAVKTARTLVQSNDLVVYEDLQVRNTVKNHHLAKSISDASWSLFTDWVDYYGKVFGIWVIAVAPHYTSQDCSVCGTRVQKSLSTRTHKCHCCGTVMHRDHNAATMILNKGLKSTVGRTESKACGQNDLCLSGETPLSKSAE
>NZ_AP018254.1|WP_096623054.1|3958290_3958671_+|nuclear-transport-factor-2-family-protein
MNTSDLELAIAKEEKLLEAMQTNNIELLDRLLHDELLFHTPDGQTVTKAMDLNNYRSGHVNWRTLTPSDRMIHQIGDNIIVAVTVEIQGNYFGQEINGKFRYLRVWKQFHDDWKVIAGSVVVISST
>NZ_AP018254.1|WP_096623056.1|3958723_3959566_-|HEAT-repeat-domain-containing-protein
MPEQNQAENLQLDKSCTQEIIQTALTTENEDVYWDLVHILRIRGGDEEFTAASHLCEGKNPQERTLGVNILAQLGTTQGNFCTRERGEILLKLLSYEEDENVLAAIGYAFGHLQDARGIFPLIKFKNHANCNVRMGVVFGLSCQEDESAIQALIELSGDVDNEVRNWATFGLGSQIAIDTPAIRDALYQRIISEVEDDKDDTVAEIRGEALLGLAIRKDQRVIEPLITELESGCVGRLSVEAALAIGDNRLYPSLMKLQDWWDVDVELLQAAIAKCQTSN

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Crispr_ID: NZ_AP018254_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_40

4303661-4303768

Orphan

Consensus_repeat	Method
GTGAAACAGCTACAGATGTTAGCGCTTGATTGTTAA	CRISPRCasFinder

1 spacers

PD-DExK

The CRISPR arrays of NZ_AP018254_40

>merge|NZ_AP018254|40|4303661-4303768|CRISPRCasFinder
GTGAAACAGCTACAGATGTTAGCGCTTGATTGTTAACTGTAGGGCATTTTCGTAAAACTAATTTCTATCGAGGTGAAACAGCTACAGATGTTAGCGCTTGATTGTTAA

>NZ_AP018254|40|38|4303661-4303768|CRISPRCasFinder
GTGAAACAGCTACAGATGTTAGCGCTTGATTGTTAA	CTGTAGGGCATTTTCGTAAAACTAATTTCTATCGAG
GTGAAACAGCTACAGATGTTAGCGCTTGATTGTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096623555.1\|4316037_4316685_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_AP018254.1\|WP_096623533.1\|4300378_4301830_-\|DUF697-domain-containing-protein	unknown	unknown	gnl\|CDD\|368297
NZ_AP018254.1\|WP_096623559.1\|4316975_4318139_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340837
NZ_AP018254.1\|WP_157780774.1\|4314015_4314795_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379312
NZ_AP018254.1\|WP_096623549.1\|4312611_4313664_-\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl\|CDD\|367067
NZ_AP018254.1\|WP_096623527.1\|4296365_4297949_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_AP018254.1\|WP_096623523.1\|4292900_4293509_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_AP018254.1\|WP_096623525.1\|4293618_4294542_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|133475
NZ_AP018254.1\|WP_096626345.1\|4294780_4295944_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_AP018254.1\|WP_096623547.1\|4311234_4312377_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|275034
NZ_AP018254.1\|WP_096623531.1\|4298921_4299602_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_AP018254.1\|WP_096623543.1\|4307568_4308234_-\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018254.1\|WP_096623539.1\|4303968_4304961_+\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176233
NZ_AP018254.1\|WP_096623553.1\|4315086_4315995_-\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_AP018254.1\|WP_096623535.1\|4302627_4302939_+\|BMC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132897
NZ_AP018254.1\|WP_096623541.1\|4305266_4307468_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379274
NZ_AP018254.1\|WP_096623529.1\|4297945_4298842_-\|DNA-repair-protein-RecO	unknown	unknown	gnl\|CDD\|234622
NZ_AP018254.1\|WP_096623537.1\|4303146_4303488_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl\|CDD\|132897
NZ_AP018254.1\|WP_096623545.1\|4308395_4310591_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_AP018254.1\|WP_096623521.1\|4291873_4292695_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096623555.1\|4316037_4316685_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	2.1353e-98
NZ_AP018254.1\|WP_096623533.1\|4300378_4301830_-\|DUF697-domain-containing-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	2.74564e-41
NZ_AP018254.1\|WP_157780774.1\|4314015_4314795_-\|hypothetical-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	0.00102429
NZ_AP018254.1\|WP_096623549.1\|4312611_4313664_-\|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	0.00852922
NZ_AP018254.1\|WP_096623527.1\|4296365_4297949_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.02497e-71
NZ_AP018254.1\|WP_096623523.1\|4292900_4293509_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	5.99397e-143
NZ_AP018254.1\|WP_096623525.1\|4293618_4294542_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	6.34887e-20
NZ_AP018254.1\|WP_096626345.1\|4294780_4295944_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.38209e-74
NZ_AP018254.1\|WP_096623547.1\|4311234_4312377_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|275034	TIGR04181, DegT/DnrJ/EryC1/StrS_aminotransferase, aminotransferase, LLPSF_NHT_00031 family. This clade of aminotransferases is a member of the pfam01041 (DegT/DnrJ/EryC1/StrS) superfamily. The family is named after the instance in Leptospira interrogans serovar Lai, str. 56601, where it is the 31st gene in the 91-gene lipopolysaccharide biosynthesis locus. Members of this family are generally found within a subcluster of seven or more genes including an epimerase/dehydratase, four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD) and a nucleotidyl transferase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analogous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar.	2.13988e-160
NZ_AP018254.1\|WP_096623531.1\|4298921_4299602_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	1.03518e-120
NZ_AP018254.1\|WP_096623559.1\|4316975_4318139_-\|glycosyltransferase	gnl\|CDD\|340837	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.	1.84743e-68
NZ_AP018254.1\|WP_096623539.1\|4303968_4304961_+\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176233	cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.05972e-162
NZ_AP018254.1\|WP_096623553.1\|4315086_4315995_-\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	2.64134e-17
NZ_AP018254.1\|WP_096623535.1\|4302627_4302939_+\|BMC-domain-containing-protein	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	9.85425e-38
NZ_AP018254.1\|WP_096623541.1\|4305266_4307468_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|379274	pfam13576, Pentapeptide_3, Pentapeptide repeats (9 copies).	3.26371e-05
NZ_AP018254.1\|WP_096623529.1\|4297945_4298842_-\|DNA-repair-protein-RecO	gnl\|CDD\|234622	PRK00085, recO, DNA repair protein RecO; Reviewed.	3.88378e-50
NZ_AP018254.1\|WP_096623537.1\|4303146_4303488_+\|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl\|CDD\|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	2.7175e-43
NZ_AP018254.1\|WP_096623545.1\|4308395_4310591_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.11908e-65
NZ_AP018254.1\|WP_096623521.1\|4291873_4292695_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	7.366e-112

>NZ_AP018254.1|WP_096623537.1|4303146_4303488_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MPPQAVGSLETKGFPAVLAAADAMVKAGRVTLVGYIRVGSARFTVNIRGDVQEVKAAMAAGVEAAESCHGGVLESWVIIPRPHENVEAVLPIGYTDQVEQYRQAVNNPIMRRT
>NZ_AP018254.1|WP_096623535.1|4302627_4302939_+|BMC-domain-containing-protein
MPIAVGVIETLGFPAVLAAADAMVKAAEVTIVYYGICESGRMMVVSRGQVAEVNRAVEAGIAAGEAAYGGKVITHYIVPNPPENIETVLPIHFTSKSEPFRIF
>NZ_AP018254.1|WP_096623533.1|4300378_4301830_-|DUF697-domain-containing-protein
MTVNLRRPILVGGLGLSFALWILDSWKDSLFQFGELAVLALAVVGGGLWLFKPNPNQAIAFLQKLPENRDTVEDAIASAQVAVNQLVTEAPTHPALPELQEQLTQLATDMNRSQLHVAVTGGKSVGKSSIIKLLQANPGISSSYSLQFQETPPLFSEASSTSDGEILASTDGADYVLFVISGDLTETELQAIQQLNLSNQRSLLVFNKQDLYLSDERAQVLYSLKQRFAQTVAVSAVPQPLKVRKHTEDGSIQEWWEQPAPDINQLTASLAQVVQTQAVNLIWATTIRQAYTIKTTAKNYLNQQRRDRAVPVIEQYQWIAASAAFANPVPALDILATAAINAQMIVDLGHIYQQKFTLDQGKAIAGEMGRMMLKLGLVELSTKAISIVLKTNAVTFAIGGILQGVSAAYLTRVAGLALVEYFQAQEIAVASGSNLNLDTLRQTLQTVFQQNQQVVYLQSFVSQSVKRLLPDNPAAQISVETPA
>NZ_AP018254.1|WP_096623531.1|4298921_4299602_-|deoxyribose-phosphate-aldolase
MSAEYADINIAPYIDHSLLTPTATSEQVAQWCEEADRYRFASVCVNPTYVRLAKELLHGKKPKICTVIGFPTGATTSATKLYEAQEAVENGADELDVVMNLGWLKAGETDAVHREIAEICEETGVIVKVILEMALLSDREKRLAAELAQDAGARFLKTSTGWNGGATVADVRLLKELVRGEVEIKAAGGIRSPQQALDLVIAGATRLGTSHSISLLHQWQSLEHSQ
>NZ_AP018254.1|WP_096623529.1|4297945_4298842_-|DNA-repair-protein-RecO
MSRTYKVTGINLKTQAFGEADRLVTILTRECGLLKAIAPGARKPHSSLGGRSGMFIVNELLIAKGKTLDKITQAHTLQTYPGLGKNLVKLAASQYLAEIALCQAIPGHPQEDLYILLNEHLNRLNNVNSHNWCTVLILLVHGIFQLLAIAGLTPQVNHCCLSQQQLEPNFGDADWQVGFSVSAGGIINLAEWKQRRQLATVREGGREYQATTPTVKEENSPYQTIVHQEEVPSLSQRLNAAELHILQHLSFPQILELDLPQDTTWLSVERVLRQYTQYQFGRQIRSATLIDSYFAANL
>NZ_AP018254.1|WP_096623527.1|4296365_4297949_-|MFS-transporter
MMQPSELETTTRSVAKHPMNRGTNRLSTPSFHVQNHPGANSQPKSNIHSRPNQESSLGEKTVVNINHTNNTNNTSKINHGISHHPDNENGNPPKIQPRRGFLPVLQNHNFLALWGGQVFCQLADKVYLVLMIALINTQFHRGEETISGWVSALMMAFTIPAVLFGSVAGVFVDRWSKKAVLVATNIWRGILVLAIPILLWLTRDWHSLGSLPIGFLILLAVTFIVSTLTQFFAPAEQAVIPLIVDEANLLSANSLYTTTMMASVIIGFAVGEPLLVGVEKIWSSLGGTAGIGQEILVGGSYAIAGLVLSVLATNENQPTQQTESENTPEKPHIFADLQDGLKYIQGQRPLRNAIIQLIILFSVFASLTVLAVRLAEIIPEIATEQFGFLLAVGGVGMAIGAMLIGQFGQRFLHGHLSTYGCIGMAAALAGLSVFTSNLWLVLILVASIGIFGALIGIPMQTTIQTQTPPEMRGKVFGLQNNVINIALSLPLGLTGVMVRFVGLKSVFLTLAAIVLIVSIFTWYNSPE
>NZ_AP018254.1|WP_096626345.1|4294780_4295944_-|glycosyltransferase-family-4-protein
MRIAWIGKKSPFCGNVTYGREITNALLDRGHEVSFLHFAQEESQTDTWPNCREVPLPFIYKSQVYTIPTLNARKVLTDSLKSIHPDIVHASLTLSPLDFLLPEICEELNIPLIATFHPPFASKGVKLISGTQLLAYQLYAPFLGNYDRVIVFSQLQRELLAKLGVPPEIVAVIPNGVDVEKYSPGTSQIKTEFAAKRLFVYQGRIALEKNVEALLRAWKQAKMRPDSKLLIVGNGPLKNSLEQFYGPEHGVIWLGFIADEARRIEILRGGDVFILPSLVEGLSLSLLEAMACGIACIATDVGADGEVLEDGAGVVITTKTVRSQLRTLLPLFQDHPEITALLGQKARQRVLERYTLTKNISRLEELYTQVLASPKVKQTKIQFIQGA
>NZ_AP018254.1|WP_096623525.1|4293618_4294542_-|N-acetylmuramoyl-L-alanine-amidase
MRERDWNIRLAAIALFLAALVFVILGTRQTPESTSSSTSQAETTALSPARIEFQSERKPAPAAISPQPTPTPSITPIPEATVIPTPAPVTPPPQQPVSTYSFITTTAFKKFQPRYQIAGADPSNYGDRYSTDINGKPATNQPIIVLHETSNSAQSAINTFRNSHPNDENQVSYHTLITLDGIIVYLVPPEKRAYGAGNSVFSGPNGEETVQTNPNLPPSVNNFAYHVSLETPPDGWNQTSETTHSGYTEAQYEALAWLIAQSSVPDNRITTHRAVDRSGQRIDPRSFDFDRFYNLLHTFRQPSSGNS
>NZ_AP018254.1|WP_096623523.1|4292900_4293509_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MIPIVIEQSGRGERAFDIYSRLLRERIIFLGQPIDSTVANLIVAQLLFLDAEDPEKDIYMYINSPGGSVTAGMGIFDTMKYIRSDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAKEILYHKRRLNEYLAEHTGQPIEKITEDTERDFFMSPEESVKYGLIDQVIDRHATGSRPVAVVS
>NZ_AP018254.1|WP_096623521.1|4291873_4292695_+|pyrroline-5-carboxylate-reductase
MLSVKFGLIGGGVMGEALLSRLLAADVYKSEEIIVSEPAIARRNFLAEKYRVNTTADNHQVFKSVSEVIFLAVKPQVFNQIAADFAAIGELQSSPMVVSILAGVTLGQLESAFTNLPVIRAMPNTPATVGAGMTAICGGSKVKPEQLKLAQQLFTVVGEVVDLPESMMDAVTGLSGSGPAYIAILVEALADGGVASGLPRAIANQLALQTVLGTAQLLAETKLHPAVLKDQVTSPGGTTIAGITALEAGGFRAAIINAVQRATLRSRELGEKA
>NZ_AP018254.1|WP_096623539.1|4303968_4304961_+|zinc-dependent-alcohol-dehydrogenase-family-protein
MKAVVMTAAGSPDVLELRDVAKPSPGSHELLIKLKAAGVNPIDTKLRKRGTFYPEQMPAILGCDGAGIVEAIGSQVSRFRVGDEVYFCHGGLGSHQGNYAEYTTIDEKFAAPKPATVSFAEAAAAPLVLITAWEALYDRARLAPLDQVLVHAGAGGVGHVAIQLAKLKGASVCTTVSSREKAEFVQGLGADLAINYLQTDFVQAVLDWTDGKGVDVAFDTVGGNVLAQSFPAVRVYGDVVTILEPDGKTSWKVARNRNLRISLELMLTPMLQNITDAQIYQTEILTQCARYMDEGSLRIHVGHRFGLEQVADAHRLLEGGSMMGKIVVEL
>NZ_AP018254.1|WP_096623541.1|4305266_4307468_+|pentapeptide-repeat-containing-protein
MDAKIRLFSCILNRFLLFLLVILLCFTCLPVLAQPQTERVLLTVDLLQERLHNPVFEDGKLFVDLRFMVVDLRPENGEFASQFYQLLRKELSKTGSGKSLGLDLSDAVIQGDFVGSDLGIRTSLYPQVISPSFSPGEQEQLAQLKGVCLQSLGLGFASGRDCKSLLGTQSTASSDIYVFRGGLTIRRTRFNGMVSFANTFFLQPVDAEGAIFQGVSNWTETRFSRTVNFSGAVFRQSAQWGGSIFFDKADWKLVKFQNGVYFQGSSFEDNVNFTQAVFTGLAKFSRSQWWGNTDFSQVRFAGQVQYTRSHFHGFLLLIETTFEQAVTFRAAQFQQPVTFRGASILNQADFSDVEFSKSAYLNVSGLGFNSNQAKFLGNPNQIGKMLVVSSLQGNQSVLRNLAQNFRSLQQIGDVNQLEYTKQQLRLQELTHLLTGININSASPETLIRLGFNFHQVSAIISRRELQPFRDKTELLALPEVDFNTYIQLNEKLMFGEPLLVGGWLLHAWTWLCLSLLLLLSGYGTSFWLVFGVGIMAIAYFGLVFWFIDRLRRFRPVAILPTTDETIAMLTSFCCLNLLGILAVFRNSENPWLTLMCLGLIIVPIPLFLVIRLYQGGRYHNQIHVTYFTEDSSMRQLRLLIGRLPVIPRYIGFRDRYLSILWEKRWNWLNYYDFSMNNLLRIGFNDIRLRDEDVPGIISSLAWYEWSLGVLYITLVLWTLSRTIPGLNLLIYLK
>NZ_AP018254.1|WP_096623543.1|4307568_4308234_-|hypothetical-protein
MSILDPNQNYTFSRYFELGLESSELAQEFGYSLTRKILHLPEFVGELDRLQELKDRIEEILPFVPLTNEFARREILISRVVTELVHYTKAELRIEYSLKVSNWLQGNLDYLLRLNSMNKLLVIEAKYEDMTRGFTQLVAEMIALDQWERGTKIEQQPILVGAVSTGTIWQFCQLDRIQKSFAQGINSYRVPEDLEQVMRILVAALKDENTVLRIKDTGDRI
>NZ_AP018254.1|WP_096623545.1|4308395_4310591_-|polysaccharide-biosynthesis-tyrosine-autokinase
MEEQDTVSLTEKSWQILQRRWIPGLSVFFPVFLISLGVASMKRPVYQAEGKLQFQRVNNISTLTGVAPDIAKLEPVVQDNRTNPLNTEAEVIRSHPIVDKTIKRVGLKDQKNLPLKPSEFLKKLTIRDIKGTDVLQISYNDTNPKLAAEVVNTLMNAYLEHNVAYHRSTVTAARKFLENQLPNAERVVRQAEAELRKFQEKNRIFSLDEEANKSIETLADLERKINETRSQVSDTGAQLKAIREQLGMNAQQAIAVTSLSQSEGVQSVVKELQGIESQLADKRNVFTETHPEIVKLREKRDSLQQILQNRIAQVSGAEPGVTPRDLQVGQLKQQLSAEMVQLESRRLGLASQLATLTATEREYRQRLNSLPLLRQQLRELERKVQAAQSTHSLLLQKLQESRIAENQNLGNAQIISQATVPDQPLGSPSVNYLSAGLLGLLSSMAAMYLLETRDKLIKTVDEAREFMGLTLLGVIPSPEKSKFSLARSSSNEYSIPSIVVRDLPRSATSEAYRMLRANLNFISADKKLKSIVVTSSVPKEGKSTVAANLAMAIAQMERKVLLVDADLHRPVQHQIWDINNTKGLSNVIVGQSEVMSAIKSVADNLDVLTAGVVPPSPGALLDSKRMASLIDSFSSYYDFVIVDAPSLNVAADAATLGQMSDGLLLVVRPGVADRVSTAFALELLEKSGQNVLGQVVNAVQPGNEPYSYYQFNDSYYAEETGSIPVVQGMEI
>NZ_AP018254.1|WP_096623547.1|4311234_4312377_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKKPILLSPPHMGDRELKYVQEAFDTNWIAPVGPHLDAFEQEFCQITGAGHAAAVSSGTAAIHLALQLIGVGRGDEVFCSTLTFAASANPIVYQGATPVFIDSDRKSWNMSPDLLREALEKKARIGKLPKAVILVHLYGQSADIEPILAACDEYGVALIEDAAEALGATYKGRSPGTFGLMGIYSFNGNKIITTSGGGMLVSEQSELVAKTRFLATQARDPAPHYQHSHIGYNYRLSNVLAGIGRGQLHVLSQRVAARRHNYEFYTQGLADLPGVEFMPEADYGMSTRWLTCLTINPKEFGCDRETIRLGLAEQQIESRPVWKPLHLQPVFSECECFGGEVAEDLFSRGLCLPSGSNLTDRELSLVIQTIHQVQQNSIQK
>NZ_AP018254.1|WP_096623549.1|4312611_4313664_-|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MKSQITSLSDPLWQDVLQKIRHDIYQLPEYIALEGNRSSGIPEAIIINEGERIFFVPYLLSQYEEDVFDIKSPYGYPGILLSEEAINSPDFVHKAWQEFRDILYQKGVCSVFLRMHPILNENFEQLFPENTFTPNGKTVSVDLRIPESELWSHTRKGHKSTINKCKRLGMEAKFVPLLEYVDEFTEIYHETMARVQATNVYYSFDRNYYRQMFEVLEDKLHLCVVEYEQEIACVGLYTEVCGIVQSTLGGTRDKFVPLSPGSLETDYVRYWAHRRGNNFLHLGGGIGGQEDHLFAYKAGFSKLQHSFMTVRLVVDEVIYSELVEKRAKSLNVPADKLLSSGFFPAYRASI
>NZ_AP018254.1|WP_157780774.1|4314015_4314795_-|hypothetical-protein
MSYTNPGKLQNPASLRRKIYTFVRERSLVELLKEIWTNGIPLSRRLIGLYFDKKFDQIYQVDTCGSIHLYELSVTRSNTESCSIYDPIPARTIRNLIANIPRDFSDYNFIDFGSGKGRALFVAAEYNLQKIIGIEFARELHETTLKNIKQYKNPNQKCFDIESICCDATEYAIPDGKCIFFFFAPFGADIFSQVMDNIRKSYEQNNRDMVILYVTDPITHPFPSQEIKCDGLFTKIRGGNVPFDIAQRDNLYYEIYQIN
>NZ_AP018254.1|WP_096623553.1|4315086_4315995_-|phytanoyl-CoA-dioxygenase-family-protein
MIAIKDNFYHLKDNVYHLTEEEMALLPTEDDIAFYEEHGWFITPQRVIPDEVIDEAILGSEKFYQGERDWVIPYQTGYSNWQPGDGDEIRNNEFVSLQKLELRKLALQPIIGAIAAKLTRSKSIRRFEDQLVYKAPTKGLGKGAVGWHTDHAYSSNCTSDKLLATWIPFHDSEENRAPLVVIDGSHKWTGTEHLRDFNQQDLPKILQKFAEEGKEIKEVPMVMKKGQISFHHGWTIHGSYPNYSDQVRLAMAVHLQDETNQYQPFWNNGKQIHHFLDLLCRKLPNGEPDYSDPEIFPTIWSE
>NZ_AP018254.1|WP_096623555.1|4316037_4316685_-|sugar-transferase
MISTNIRGLTLLNRSQFLKHVLDRIVAAIALLLFSPIFLVVAIAIYLQMGSPVVFTQDRPGKDGQIFKFYKFRTMTNECDAEGNLLPDEDRVTKLGQFLRQTSLDELPQLWNVLIGDMSFVGPRPLLVRYLDRYTPEQARRHEVKPGITGWTQVRGRNSISWEEKFQLDVWYVDNWSLWLDLQILLLTVFKVLKQEGIDEEGCVSSTEFLGQMKQ
>NZ_AP018254.1|WP_096623559.1|4316975_4318139_-|glycosyltransferase
MKKILIVATIPDTLRGFILPFVRYFRDQGWTVDGMACGISECTDCIREFNRTWDVEWSRNPLDPGNFLKTPRVIQEVVLQEQYNLVHVHTPVAAFVTRYALRYLRKQIGTSVIYTAHGFHFHPYGNPVKNAVFLTLEKIAGNWNDYLVVINRHDEQVARDHRLNVPERVWYMPGIGVDINYYSPTGIYAQEIEKVRQEMDISANTSLFLSVAEFNPGKRHRDIIQALAKLHREDVCVAFAGDGDLMESMRNLACELGVEEQVRFLGFRKDITTLIRASVATILASEREGLPRSVMESLCLEVPVIGADIRGTRDLVTQDCGLLFPVGDVQALTDCMAWILDHPQQARVMGKMGRDRMNAFDLSHVIQRHEELYTKALSSSSVKLSVE

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Crispr_ID: NZ_AP018254_41

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_41

4433694-4433807

TypeV

Consensus_repeat	Method
GTAATTACTGAAGCATTAAGGAAACTTTTAATTTCCAC	CRISPRCasFinder

1 spacers

Cas14c_CAS-V-F

The CRISPR arrays of NZ_AP018254_41

>merge|NZ_AP018254|41|4433694-4433807|CRISPRCasFinder
GTAATTACTGAAGCATTAAGGAAACTTTTAATTTCCACGATACAATCGAAACCGTCCACTACGTCGTGCTACTACAGTAATTACTGAAGCATTAAGGAAACTTTTAATTTCCAC

>NZ_AP018254|41|39|4433694-4433807|CRISPRCasFinder
GTAATTACTGAAGCATTAAGGAAACTTTTAATTTCCAC	GATACAATCGAAACCGTCCACTACGTCGTGCTACTACA
GTAATTACTGAAGCATTAAGGAAACTTTTAATTTCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096626367.1\|4436821_4437481_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP018254.1\|WP_096623723.1\|4439283_4439907_-\|DUF3859-domain-containing-protein	unknown	unknown	gnl\|CDD\|273258
NZ_AP018254.1\|WP_096623721.1\|4437477_4439277_-\|asparagine-synthase	unknown	unknown	gnl\|CDD\|238949
NZ_AP018254.1\|WP_096623709.1\|4428881_4431743_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_AP018254.1\|WP_096623707.1\|4428297_4428705_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623725.1\|4440259_4440943_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|237709
NZ_AP018254.1\|WP_096623719.1\|4436141_4436561_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|369489
NZ_AP018254.1\|WP_096623717.1\|4434807_4435893_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_AP018254.1\|WP_096623701.1\|4425634_4425949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623705.1\|4428011_4428200_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623711.1\|4432004_4432817_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|371375
NZ_AP018254.1\|WP_096623713.1\|4433153_4433495_-\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_AP018254.1\|WP_096623703.1\|4426598_4427732_+\|sodium-dependent-bicarbonate-transport-family-permease	unknown	unknown	gnl\|CDD\|225866
NZ_AP018254.1\|WP_096623695.1\|4419520_4421314_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_AP018254.1\|WP_096623697.1\|4422358_4423147_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_AP018254.1\|WP_172892796.1\|4443445_4446118_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_AP018254.1\|WP_096623727.1\|4441062_4442205_-\|DUF3086-domain-containing-protein	unknown	unknown	gnl\|CDD\|371451
NZ_AP018254.1\|WP_096623699.1\|4423728_4424907_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14c_CAS-V-F	-	gnl\|CDD\|223747
NZ_AP018254.1\|WP_096623728.1\|4442360_4442753_-\|DUF3119-family-protein	unknown	unknown	gnl\|CDD\|371464
NZ_AP018254.1\|WP_096623715.1\|4434186_4434624_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096626367.1\|4436821_4437481_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.23663e-78
NZ_AP018254.1\|WP_096623709.1\|4428881_4431743_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_AP018254.1\|WP_096623699.1\|4423728_4424907_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.88458e-50
NZ_AP018254.1\|WP_096623727.1\|4441062_4442205_-\|DUF3086-domain-containing-protein	gnl\|CDD\|371451	pfam11285, DUF3086, Protein of unknown function (DUF3086). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	6.7543e-180
NZ_AP018254.1\|WP_096623725.1\|4440259_4440943_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|237709	PRK14419, PRK14419, membrane protein; Provisional.	1.59961e-86
NZ_AP018254.1\|WP_096623719.1\|4436141_4436561_+\|histidine-kinase	gnl\|CDD\|369489	pfam07730, HisKA_3, Histidine kinase. This is the dimerization and phosphoacceptor domain of a sub-family of histidine kinases. It shares sequence similarity with pfam00512 and pfam07536.	2.78501e-06
NZ_AP018254.1\|WP_096623728.1\|4442360_4442753_-\|DUF3119-family-protein	gnl\|CDD\|371464	pfam11317, DUF3119, Protein of unknown function (DUF3119). This family of proteins has no known function.	1.11058e-58
NZ_AP018254.1\|WP_096623721.1\|4437477_4439277_-\|asparagine-synthase	gnl\|CDD\|238949	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .	1.57834e-52
NZ_AP018254.1\|WP_096623713.1\|4433153_4433495_-\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	6.32002e-56
NZ_AP018254.1\|WP_096623703.1\|4426598_4427732_+\|sodium-dependent-bicarbonate-transport-family-permease	gnl\|CDD\|225866	COG3329, COG3329, Predicted permease [General function prediction only].	1.13518e-138
NZ_AP018254.1\|WP_096623695.1\|4419520_4421314_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_AP018254.1\|WP_096623697.1\|4422358_4423147_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	3.88415e-59
NZ_AP018254.1\|WP_172892796.1\|4443445_4446118_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	2.40242e-53
NZ_AP018254.1\|WP_096623723.1\|4439283_4439907_-\|DUF3859-domain-containing-protein	gnl\|CDD\|273258	TIGR00763, Lon_protease, endopeptidase La. This protein, the ATP-dependent serine endopeptidase La, is induced by heat shock and other stresses in E. coli, B. subtilis, and other species. The yeast member, designated PIM1, is located in the mitochondrial matrix, required for mitochondrial function, and also induced by heat shock. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0.0028733
NZ_AP018254.1\|WP_096623717.1\|4434807_4435893_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.79423e-56
NZ_AP018254.1\|WP_096623711.1\|4432004_4432817_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	7.49818e-109

>NZ_AP018254.1|WP_096623713.1|4433153_4433495_-|XisI-protein
MEKLEKYRALIRQLLNNHAKSEGNKSDSEIECQLIFDTEHDHYQLIEIGWDGLKRVYNCFIHIDIKDGKVWIQRNMTEADIAKDLAEMGIPKEDIIIGLHPSYKRPYTGYGVA
>NZ_AP018254.1|WP_096623711.1|4432004_4432817_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKTDTIFYRLFQSFPSIFFELINQPPETANTYEFSSVEVKQLAFRIDGVFLPKNSTSSPIYFVEVQFQPDDKLYSRLFTEIFLYLHKTQLTNNWRGVIVYPSRNIDTGETDRYIELLASERVSRIYLDELESASPSIAIATVKLVVEPESNIVTKTSELINLVKQQIDSEITQREFLELIETIIIYKLPQKSRKEIEQMFGFSELKQTKVYQEAKEEGKLEGKLEGKLEGKLEAVPFMLSLGATVEQIADSLDLDINLVRSVAAKVNTDK
>NZ_AP018254.1|WP_096623709.1|4428881_4431743_+|excinuclease-ABC-subunit-UvrA
MSDTQSLNGKNTTLHPKNQNSIRIRGARQHNLKNIDLEIPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVEAIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGQPHCPICDRNIAPQTIDEMVDQIMGLSDRTKFQILAPVVRGKKGTHQKLLSALAAQGFVRVRINGEIRELADSIELDKNHTHTIEVVIDRLVKKDSIQERLFDSLSTCLKLSSGIAVIVYTPADGETEQEMVFSENFACPEHGAVMEELSPRLFSFNSPYGACPHCHGLGTLRRFSPEVIIPDPEAPVYAAIAPWSEKENSYYLELLYSLGQSHGFELQTKWNQLSDEQRDVILNGEQPQKGQKTPHFYGVIPILQRQYEGGSELIKQKLEQYLVDQPCPVCHGQRLKPEALAVRMGQFRILDLTGVSIRDCRERVEQLQLSPRQAQIADLVLREIKARLQFLLDVGLDYLTLDRAAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNGRLLTTLTKLRDLGNTLIVVEHDEETIRAADYVVDIGPGAGMHGGNIVAAGDLQTLLQAENSLTGAYLAGRKQIQTPSQRREGNGLSLTIVNARRNNLKNITVKIPLGKLVSVTGVSGSGKSTLINELLYPALQHHLTKRTPQPKDIDEVRGLNAIDKAIVIDQSPIGRTPRSNPATYTGVFDVIREVFSNTIEAKARGYKPGQFSFNVKGGRCEACSGQGVNVIEMNFLPDVYVQCEVCKGARYNRETLQVKYKDKSIADVLNMTVEEALDFFQNIPKAVSKLQTLLDVGLGYIKIGQPATTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLLDVLQRLVDKGNSVLLIEHNLDVIRCSDWVIDLGPEGGDKGGEVIAVGTPEEVAKSENSHTGYYLRHVLQQYPINNS
>NZ_AP018254.1|WP_096623707.1|4428297_4428705_+|hypothetical-protein
MFGNFQKTQLRIEIDSSAKSIAESLLYPAQLQKWLPSGNLSLGMPDKLYSGYEFTSQLGPVQIHHYVDVVGDNCLRLLLSQGIDGFHEWYWGEGWVQSRLEGVSVLPLSLGQTASLISLRQFLRVNFPNDQKLSS
>NZ_AP018254.1|WP_096623705.1|4428011_4428200_+|hypothetical-protein
MFLMNLLREEFLVFMLPFAAAFSKPVWESAIALVVGAILTRFRSRQKGIGRDAATILFPNLK
>NZ_AP018254.1|WP_096623703.1|4426598_4427732_+|sodium-dependent-bicarbonate-transport-family-permease
MDFLSGFLMRMLAQLQSPTLGFLIGGMIIASLGSQLQIPDAIYKFIVFMLLMKVGLSGGIAIRNANLAEMLLPAAFAMIMGILIVFIGRYTLAKMPNVKVVDAVATAGLFGAVSGSTLAAALTLLEEQGIKYEAWAGALYPFMDIPALVTAIVVASIYVSKRRITADEYHSKEEYLSKQAVAVGGYPSEPEYPTTRQEYLSGQYGSKSSKRVKIWPIVKESIQGSALSALLLGLALGILTKPDSVFESFYEPLFRGLLSILMLVMGMEAWSRVAELRKVAHWYAVYAVIAPLLHGLIAFGFGMIAHYATGFSLGGVVILAVIACSSSDISGPPTLRAGIPSANPSAYIGASTAVGTPVAIALGIPLYIGLAQALMGS
>NZ_AP018254.1|WP_096623701.1|4425634_4425949_-|hypothetical-protein
MTQQANKLVIVTEKLLLKKIAQIIDEAGATGYTVVAAGGKGSRNVRSSGQPNVSDTYSNIKIEVLTASRDLALKIADEVAANFFNDYSGIAYLCQAEVLHAHKF
>NZ_AP018254.1|WP_096623699.1|4423728_4424907_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MLVLEAKLKGKESQYGLLDEAIRTALFIRNKALRHWIDNKDVSKNDLQKLCAVLAKEFDFAGKLNSMARQASADRAWCAIKRFYDNCKAKKPGKKGYPRFKKRGHSVEYKTSGWAISADKKYITFTDGFKAGKFQLVGTRDFSFYSTKQIQRVRVVKRADGYYCQFCVDAERKEQHQHNGKQVGIDVGLEFFYTDSDGKTVENPRFLRKSEKSLKRKQRKVSRCKKGSSNRRKAVKKLAKKHLKVSRQRKDFAVKTARTLVQSNDLVVYEDLQVRNMVKNHHLAKSISDASWSLFTDWVDYYGKVFGTWVIAVAPHYTSQDCSVCGTRVQKSLSTRTHKCHCCGAVMHRDHNAATMILNKGLKSTVGRTESKACGQNDLCLSGETPLSKSAE
>NZ_AP018254.1|WP_096623697.1|4422358_4423147_-|dienelactone-hydrolase-family-protein
MPNLEIKTSTVQIPNQGLQIDGYLAQPAGAGNFGAVIVFQEIFGVNQNIRDITDLIAQQGYIAIAPAMFHRLAPGFEFGFSPEDAGYSPEAYRLGMEYYQQVKYGEIISDIQAAIAYLKNLPQVKPDAIGCIGFCFGGHVAYIAATLPEIKATASFYGAGITVPSYGEATPTLNRTSAIKGTIYTFFGNQDPLISAEDNAKIEAELQKHNISHRVFRYDAGHGFFAGFFVDKYPFLAKNPNIKQAAAIDAWSQVLELFRNHL
>NZ_AP018254.1|WP_096623695.1|4419520_4421314_-|translational-GTPase-TypA
MTLPIRNVAIIAHVDHGKTTLVDALLKQSGIFREGEDVPDCVMDSNDLERERGITILAKNTAVKFKDTLINIVDTPGHADFGGEVERVLGMVDGCILIVDANEGPMPQTRFVLKKALEKGLRPIVVVNKIDRPQAEPHKAIDKVLDLFLELGADDDQCDFPYLFASGLSGFAKEKLEDEPKDMQPLFEAILRHVPPPVGDPNKPLQLQVTTLDYSEYLGRIVIGRIHNGTIRMGQQAALVTESGNIVKAKITKLMGFEGLKRVEMEEASAGYIVAVAGFADANIGETITDPNEPQALPLIKVDEPTLQMTFWVNDSPFAGQEGKFVTSRQIRDRLTRELETNVALRVEDGDSPDKFLVSGRGELHLGILIETMRREGYEFQVSQPQVIYREVNGQPCEPYELLALDVPEDAVGSCIERLGQRKAEMQDMQMGANGRANLEFVIPARGLIGFRGEFIRMTRGEGIMNHSFLEYRALSGNIEARNKGVLIAFEEGVSTFYAMKNAEDRGVFFITPGTKVYKGMIVGEHNRPQDLELNVCKTKQLTNHRSATGDELVQLQAPVEMSLERALEYIGPDELVEVTPESIRLRKMSKKFAGKR
>NZ_AP018254.1|WP_096623715.1|4434186_4434624_+|hypothetical-protein
MSDTPEPIPTPEHIWIITEEVVETSTTKQKEVVTRDGSRSGGDTGGRLGGKTTQEEIIIQQQQGQLVITRRKVEVTKLKQEMRGFLQAMREMLDEAEAPNAKIQLDEVELSVEVNGEGQISLFGFGGGKAGGKGAMTFKFKRQNR
>NZ_AP018254.1|WP_096623717.1|4434807_4435893_+|sensor-histidine-kinase
MVEELYTPEQLAQMHDSLWQCVLQFANLSAAQERNRIARDLHDSVGHALTALNFQLQTAIKLYKPDPNQAEEFLTEAQRLVKLATQEVRQSVQALRSDTLETQPLETLIQSLVDDLRSTTGIMPTVNLDVQVSPPSHLVMPVYRIIQEALNNIRKYAQASEVTIELCANAAEIQFQICDNGRGFDPHSVAGGYGLKGMHERVAVLKGLLLVESSPGDGCQIHVWLPTHISTPAIAMGTKLCDSAKANLSKSELNHPVGNISNISMSPPHLDIVSDSPSSSISEEYSTGVAARTQTSRPDLSLLMSEINLDFSRLLETSQEANQTGYKHEHQQMDVQPFHQSPTASNVKIGEWQPLDLNVSA
>NZ_AP018254.1|WP_096623719.1|4436141_4436561_+|histidine-kinase
MMMVAVLLVIMLLAIFMPMLTMNDIPVSKSDCHHHKRAKFIPQQASDVSDVTLSNFQRDLTVMCEKNENLVDIYNELGQSIAALNIQLQVAQKLWQTNPNQAKESVSEAYHLSGVIMREVRETVRSLSADHRLSVGSRD
>NZ_AP018254.1|WP_096626367.1|4436821_4437481_+|response-regulator-transcription-factor
MIRLLLVDDQSLVRQGLKAMLSLEEDLEIVGTAENGEEAISLVETLQPDVILMDVRMPVMNGATATKIICDRYPQIKILVLSTYDDDKDVTDAIRAGAKGYLLKDMPSEELVNAIRAVNHGYAQLAPGLLERVINQQVPATPKREFPSQLPPGFAELTPRELEIAKLVAVGSTNQEIADQLYISQSTVKTHINSIFNRLNIKNRAQLAIYANSVFGSQN
>NZ_AP018254.1|WP_096623721.1|4437477_4439277_-|asparagine-synthase
MGGIPHCLGYWGYGVRNQLNQQLNRAVAKFVAGYNVALELPDQPHHQALIWSVVEVLNSGKLKSVDGFSLSAGGFAHVADAWVRIQSDNSQQSLILGREAFGRVPLYWLQQGEVIWFASQLQLLLPILTNPEINLAGLYGYTCFSYVPNPITPVNHIYTIPAGNELIWQSLQNTPHTSHLLPPPQSRTIHQWQQDKIEIQDEQTAIQELQTHLKNAVQTQISDLSDEPVGIFLSGGLDSAIVASLLVQAGVKVRAYTLDFSPFGVSESPYAEKVADFLHIPCQKVAATPNLIKQAIIPTVKALDLPFGDGVTVPLYLLNQTASQETQIIFNGEGGDQLFAGWTNKPLIAASVYGENDFTQNYLRTFHRLWGYETQIFTPEISTQIHQLSPETWLQTALDPAYCSGLLHRLRRASLMLKGAQNIHPRATNLGFAHGLRVRSLFCDFTLANWTFKLAGELCLKGSCEKYILKRAVENWLPPEIVWRQKRGMGVPLTSWCFNGLWYQIGTWLNPNTLKVGKHLQPDIAAKIATGKLSANIQGRRIGEILWLLIMWELWKIHIFGEKPAPKSWNHPFWLPHFLSGKLSKWEKLSSSRFPTPNP
>NZ_AP018254.1|WP_096623723.1|4439283_4439907_-|DUF3859-domain-containing-protein
MSSKLNEEQLKQIIAEVGEMSRRQETELDREQIQEILRELNLPPELLDEAIIQLRRRQALAHQRRKDRFVLGGIAIALVVAIGTTFWFTQRHNSAIANIQVQRDRITLAGDDGGGLNRVARQNNPELFYRVTLADAPVGERLNLTCNWIDPNGQTVKQNRYQTQTITTSIWNTHCRYNLGTGAKTGTWQVQMFLGDRLLGEEKFTVE
>NZ_AP018254.1|WP_096623725.1|4440259_4440943_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MLIWLSLCFLTVIAAYFLGSIPTGYTVAKVLKGIDIREFGSGSTGATNVLRTLGKGPGAFVFIVDCFKGVLAILLVKWLGEFAPVSNLLPDNVVIGVWLPWLVVLAGLAAVLGHSKSIFLNFTGGKSVATSLGVLLAMDWQVGLAAFGVFALCLGISRIVSLSSICAAVAVSILMVVFHQPLAYLLFAIAGGAYVIVRHQSNMQRILAGTEPKIGEKVEVSSESVVS
>NZ_AP018254.1|WP_096623727.1|4441062_4442205_-|DUF3086-domain-containing-protein
MYSEDSPNPEPNQNPNLDKLEQTENQPTDVLDQSPPEPENVNSPASFPPQENIQQNPNPELIRTEAELKQKIADLENTYHQLQAQLNSTHVAMGRLVEESLSELEQRKQALQIAVEQLERRQERIRKEMRTTFSGASQDLAVRVQGFKDYLTGSLQDLVIAAEQLQLVPVAKPTPEPERVTPKEVQPPQPETGTLQFAQQQFQETSRKIRRFIDQYRTKPDYYGPPWQLRRTFEPVHAERVSTWFFEQGGRGALRTMGSRLQNILVASAIISIMNELYGDRLRVLVLANSPERLGEWRRGLQDCLGIGRPDFGPDRGVVLFETAEAIAQKAERIVRGKEIPLIIVDDSEEQISLALLQFPYWLAFAPDPKTMRSNGFDDF
>NZ_AP018254.1|WP_096623728.1|4442360_4442753_-|DUF3119-family-protein
MVTPSTQATDVSSTVELPPSYNIPIILLLGAFGLVFVQPIVAGVVGLLGLFLMLQTGLIRLQFTDTDMDVYRGQTLIRRFPYREWENWRIFWHPVPILFYFKEVNSIHFLPILFNPGTLKACLEKYCPRK
>NZ_AP018254.1|WP_172892796.1|4443445_4446118_+|tetratricopeptide-repeat-protein
MPNSDNYLDWFSLGNELLDSGRLEAAIVCFDKALDGNASYHLAWYNRGIALEDLGQVSAALASYRQATKLKPDCYEAWYNQGNVLLQLDEIESAIAAFYQAIEFNPEDYLSWYALGNGLLRSGRLEKAIAAYDRAISLQAGCDSAWFNRGIVLAELKRYEEALASFDRALDINPQKLHAWNNRGVVLSDLRREREALACFERAIAIDPNYGEAWFNRGRSLRLLGRYTEAIACFDKVIELKADDDGAWVQKGLALQRLSRWEDALYCFDRSLAINPGSLSGWLYRGLCLNALSRYDQAIAAFDQAIQINPDDSDAWYSRGMTLFACQKYAEASANFDQACSLQPNLHDAWFYRGICLYELSEYENALGNFERAIAIQPKNHVGWYERGLTLRCLGRYEEALESFAKAVKYRSDVAKIWYYYGLTLVDLQRHEDAIGCFDVAIALEPDGALWYLRGNALASIGRLEGAVASFNRAIEIHPQRVEYLHRRADVLFDLGLHDDALADYERILELEPENYLVWVLHGVTLFELGKLTDALASIDQGLQLQPDYAAAWSEKGLVLRALAQFGEAIAAIDRAIQLNPQLETSWYNRGLVMFDLGEFTQAIAAYDQALEINPKNQTTWYNRGLALEKMGNHPEAIASYEKATEVDPDYWQAWCKYADLQSLAAAYTQALTGYSRFVELKPELHLSWLFQAITLRKLGQINAAFNSIERALSLNNNDVRVWYERGLILYAMQCFEDAILSYDEALKLNPNDDKIWFNRGLSCDRAHRTPEALIAYEKAIALNPNFDLAWYCQGLILSKSGKYTAAIPAYKQAIALNPNHASSLYGLSCCYAVLGDTNLALDLLQRAVQLNPQECSQWIKDNRDFDHLRSHPQFQQILNLDMNHNIKVN

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Crispr_ID: NZ_AP018254_42

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_42

4595809-4595922

Orphan

Consensus_repeat	Method
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_42

>merge|NZ_AP018254|42|4595809-4595922|CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCCAATCGGGGGCTTTTTTAATTCTAGTCTCCTCTTATGAGGTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCC

>NZ_AP018254|42|40|4595809-4595922|CRISPRCasFinder
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCC	AATCGGGGGCTTTTTTAATTCTAGTCTCCTCTTATGAG
GTTTCCAATCAATTATTTCCCCTCATAAGAGGAGACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096623944.1\|4591656_4592820_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_AP018254.1\|WP_096623938.1\|4587186_4587834_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_AP018254.1\|WP_096623946.1\|4593016_4593454_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240038
NZ_AP018254.1\|WP_096623942.1\|4590268_4591525_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_AP018254.1\|WP_157780782.1\|4583749_4583914_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096620005.1\|4594326_4595685_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|373239
NZ_AP018254.1\|WP_096623960.1\|4602798_4606005_+\|glycosyl-hydrolase-family-15	unknown	unknown	gnl\|CDD\|366266
NZ_AP018254.1\|WP_096623968.1\|4609705_4610383_-\|cyanoexosortase-A-system-associated-protein	unknown	unknown	gnl\|CDD\|275015
NZ_AP018254.1\|WP_096626394.1\|4593501_4593825_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623956.1\|4601124_4601352_+\|killer-suppression-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623958.1\|4601344_4602454_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|225635
NZ_AP018254.1\|WP_096623940.1\|4588768_4590127_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_AP018254.1\|WP_096623936.1\|4584294_4586622_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173799
NZ_AP018254.1\|WP_096623964.1\|4607418_4608471_+\|anthranilate-phosphoribosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|168934
NZ_AP018254.1\|WP_096623954.1\|4598903_4600256_+\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	unknown	unknown	gnl\|CDD\|223841
NZ_AP018254.1\|WP_096623950.1\|4596505_4597771_-\|FAD-dependent-hydroxylase	unknown	unknown	gnl\|CDD\|236001
NZ_AP018254.1\|WP_096623934.1\|4583952_4584231_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096623962.1\|4606360_4607338_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_AP018254.1\|WP_096623952.1\|4598065_4598632_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_AP018254.1\|WP_096623966.1\|4608490_4609204_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096623944.1\|4591656_4592820_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.39586e-54
NZ_AP018254.1\|WP_096623938.1\|4587186_4587834_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.80121e-76
NZ_AP018254.1\|WP_096623950.1\|4596505_4597771_-\|FAD-dependent-hydroxylase	gnl\|CDD\|236001	PRK07364, PRK07364, FAD-dependent hydroxylase.	0
NZ_AP018254.1\|WP_096623946.1\|4593016_4593454_-\|NUDIX-hydrolase	gnl\|CDD\|240038	cd04682, Nudix_Hydrolase_23, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.80831e-33
NZ_AP018254.1\|WP_096623942.1\|4590268_4591525_-\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	2.23877e-23
NZ_AP018254.1\|WP_096620005.1\|4594326_4595685_+\|IS4-family-transposase	gnl\|CDD\|373239	pfam14706, Tnp_DNA_bind, Transposase DNA-binding. This domain occurs at the C-terminus of transposases including E. coli tnpA. TnpA encodes a transposase and an inhibitor protein, the inhibitor only differs from the transposase by the absence of the N-terminal 55 amino acids, which includes most of this domain. This domain consists of alpha helices and turns, and functions as a DNA-binding domain.	2.13308e-21
NZ_AP018254.1\|WP_096623960.1\|4602798_4606005_+\|glycosyl-hydrolase-family-15	gnl\|CDD\|366266	pfam00723, Glyco_hydro_15, Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.	4.0783e-69
NZ_AP018254.1\|WP_096623968.1\|4609705_4610383_-\|cyanoexosortase-A-system-associated-protein	gnl\|CDD\|275015	TIGR04153, hypothetical_protein_L8106_04486, cyanosortase A-associated protein. Members of this protein family are found exclusively in the Cyanobacteria, usually usually encoded next to and in at least one case fused to a gene encoding cyanoexosortase A. Note that family TIGR04533 shows a similar relationship to cyanoexosortase B (TIGR04156), and no EpsI is found.	5.44412e-65
NZ_AP018254.1\|WP_096623958.1\|4601344_4602454_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|225635	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only].	4.662e-21
NZ_AP018254.1\|WP_096623940.1\|4588768_4590127_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_AP018254.1\|WP_096623936.1\|4584294_4586622_-\|S8-family-serine-peptidase	gnl\|CDD\|173799	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.5252e-76
NZ_AP018254.1\|WP_096623964.1\|4607418_4608471_+\|anthranilate-phosphoribosyltransferase-family-protein	gnl\|CDD\|168934	PRK07394, PRK07394, hypothetical protein; Provisional.	0
NZ_AP018254.1\|WP_096623954.1\|4598903_4600256_+\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	gnl\|CDD\|223841	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].	1.85518e-156
NZ_AP018254.1\|WP_096623962.1\|4606360_4607338_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.27714e-51
NZ_AP018254.1\|WP_096623952.1\|4598065_4598632_+\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.40707e-47

>NZ_AP018254.1|WP_096620005.1|4594326_4595685_+|IS4-family-transposase
MEKWAARELKHLDLGDKRRNKRLIKMVEDLAAQPTSSVPQACGSVAATTAAYDLWSSPYIKPSDISNGHIKSTIERAKEHEIVLAIQDTTNMDVTSHPATEGIGYLDQRKSLGLKVHSTLLSSIKGVPLGVIDQQVWSRNIEDLGIAKTRRKRQTEEKESQRWLEGLERTNKLLPEKIKIITVADSEADIFDLFNQERPENSHLLIRGTHNRKVSHTANYLHEAIRSSPTQGEVEVKVRRNPERPERIAKLTIRYETVEIEVPKNKLGRSLCKPVKLQVILAEEKSPPSEIKPISWLLLTTLEINSLEDAVKCVEWYTYRWLIERYHYTLKSGCRIEELQLETGKRLSMALATYSIVAWRLLWLTYQARDNPEQSCETVLTTVEWQSLCVSVNKNPIPPDQPPTLREAVRMIARLGGFLGRKGDGEPGVKTIWRGLRRLHDIAVTWKLAHQI
>NZ_AP018254.1|WP_096626394.1|4593501_4593825_-|hypothetical-protein
MLGACGSITGSGINMIGANVTPIRDLSSDLIPNQEQTTVYVQGKVIQRVPLVKKYAYQIDDNTGKIWVLTEQNNLKVNSQVVIKGQLRYQSISFEGQNFGEIYLEEK
>NZ_AP018254.1|WP_096623946.1|4593016_4593454_-|NUDIX-hydrolase
MNQQPTEVAIAILQQDDKFLMQLRDNIPNIANPGIWGFFGGHLEPGETPEQAVKREVLEEVGYVLPPTLRQFGIYADEKVIRYVFYAPLEVSMEELVLHEGWDMGLISIPEIQQGKAFSRVAGEERPLGVLHRQILLEFISNWYD
>NZ_AP018254.1|WP_096623944.1|4591656_4592820_-|AI-2E-family-transporter
MNNLPAPHESSSKISANQLPRWLIWGITFPLIVLNGWVLLIVLKYFQPLVSIFISAALLAFVLDYPINFFQRRGLNRIIAIAFVLLLTIVIVVAVGFTLVPVIFEQLYELTQVLPSWIDSGTEKIEAFQGWILQQEEFPINVGGLITQALDRLSTQFQSFTGKILGFAVDTISTIVNVLLTIVLTIYMVLNGEKLWDGIFQWFNPKIGTPIRQLIREDFQNYFIGQATIGAILSVLLTLSFWVLKVPLGLLFGITIGFFSLFPFGTGIGISLVVLLVGLQNFWLGLEVLIVAIATDQINSNVIAPRLLSNLTGLNPIWVVISLLLGAKFAGILGLLVAIPIASFIKDVADIWRSGEFNLSTHVQPETNPNITTNITGEISDVEIKKS
>NZ_AP018254.1|WP_096623942.1|4590268_4591525_-|AAA-family-ATPase
MLKQLILENWKSFAYAELPLSPFTVIVGTNASGKSNLVEAFILLKRLVSGNTIDASLAGDKTLTPIRGGIDWAALKPEREFTLKVLVDGEGNQVDYLYSVNVDTKPDAEILAEKIIYREYQRDKTKVVFERDIISGYIDSHDYKDIILKISTLYKNARWTLPNHHKSILNYFKNTYILDNITEVNLIISSLEKIFVLNPVPERMRGYSPISKTLDSDGSNIAGVIAGLSTRVRDEVEETLCEYAQGLPAGNIVKVWAERIGRLGGDAMLYCEEEWTHGQIQEIDARSMSDGTLRFLAIMTALLTIPRHSRLIIEDVDSGLHPSRAELLARMLLELGRQREINILVTTHNPALLDAFGMEIVPSVVVVHRDVNTGESKLTRLKDIENLPKLMVSGALGQLTTEGAIEDSLAANRIQDSR
>NZ_AP018254.1|WP_096623940.1|4588768_4590127_+|replicative-DNA-helicase
MSDELKFQGSGIDRLPPQNIEAEEAILGGILLDPEAISRVSDRLVADAFYLSAHQEIYQAALRLHAQGKPTDLLTMIAWLTDHDLLTKIGGRSKLISLLDQTVSAVNVDVLAQLVMDKYTRRQLIKAGNEVVQLGYETETELPRVLDQAEQKIFGVTQERSQSGLVHIAETLIANFQDIEERNQGVALPGITCGFYDLDAMINGGFQRSDLIIVAGRPAMGKTSFSMNIAHYISGHVRLPVAIFSLEMSKEQLALRMLSSEAGIESSYLKSGRISQNQWESLTRAIGLLSEMPIYIDDTPNITINEMRSQARRLQAEQGMDLGLILIDYLQLMEGAGDNRVQELSKITRNLKGLARELNVPVIALSQLSRGVEARTNKRPMLSDLRESGSIEQDADLVMMLYRDDYYNPDTPDRGIAEVIIAKHRHGPTGTVKLLFDPQFTKFKNLARQGGY
>NZ_AP018254.1|WP_096623938.1|4587186_4587834_-|response-regulator-transcription-factor
MKIRLLLVDDQEIFRQGLASLLSLEDDLEVVGEAANGKQAIALSHELQPDVILMDIRMPICDGVVATQEIHQRFPWMKILVLTTFDEDEYIWKSLQAGASGYLLKSTPAIQLATAIRTLHQGHCQLGPTIAPKLFAQLRYPQEEPCKPSPSQQLANLSEREQQVLSLIAQGKSNREIAQILFLSEGTVKNYVTQILNHLELRDRTQAALWARENL
>NZ_AP018254.1|WP_096623936.1|4584294_4586622_-|S8-family-serine-peptidase
MAVQQNSTVTESQLTTKPLVQQSVNNLTSNNFNVDILWRNSSTGSNAAWLMNGTTHEAGLMMVSHDPSWKIAAIADFNNNGQDDILWRNSLTGQNAIWVMRDSSTIEEGVWLIQVHDTNWQIEAVTDFNRDGRVDILWRNYRTGQNAIWEMNGTNLSRGVFITQVHDTNWKIESTADFNRDGQVDILWRNYQTGQNAIWEMNGTNLSRGVFITQVHDTNWKIESTTDFNRDGQVDILWRNHQTGQNAIWEMNGSTLKNGIWLESRSSNWQIEATADFNGDGQVDILWRNYQTGQNSVWQMNGTNLRENVVLTTIGEMDWQIAGVIKRNTIENNNTLSTASNLGVINGLTTITNYVGNNDVDDYFRFTVNSPSRFSLDLFGLNADVDVALFDASGRRITSSERGATSNESIRRELAAGNYYVRVYRYGSANSSYTLNLSLLSGFNSTYGYGLVNADDAVSRALGQNLNGNNTINTSNWSRRTGGNWGNDAINAPNAWSRGYTGKDITVAVIDDGVFISHPDLSRNIWRNPGEIRNGIDSDRNGYVDDINGWNFSTGINGNNSDVNPVRDSQGEWNSHGTHIAGTIAAANNGEGITGVAYDSQIMGLRIGRTEEGYFLNTGNLATAIRYAVDNGARVINMSLGLLFVSDELERAFAYAASRNVMIVVAAGNDAGSFPYAPAYLATNYGISVGAININGNITSFSNRAGSNPDMLHVVAPGQDIRSTVAGSSSYANYRGTSMAAPHVVGTVALILDANPHLSHAQIRQIIAETATRIN
>NZ_AP018254.1|WP_096623934.1|4583952_4584231_-|hypothetical-protein
MSNERHVVALVYDNPAAIAPEKKYIVAAKNMTIVGTEETCTTYLPLSAIAINLAIKITFTAKTFPGHLQKEYFQKYKKIGNFTIALSKAENI
>NZ_AP018254.1|WP_157780782.1|4583749_4583914_-|hypothetical-protein
MTDTLEQKEKQNIQPASIVRCRDHPEQRKKDKIERDNLKYNKNYQVLVLKHDED
>NZ_AP018254.1|WP_096623950.1|4596505_4597771_-|FAD-dependent-hydroxylase
MAQAQLSATWQPTRLVSDSSGYDYDLVIVGGGIVGLTLAGALKDSGLSILLIEARLDSPAVMKGQAYAVHMLSAQIFRGIGVWKSILPHIATYRRVKLSDAGFSQVVEFNTQDIGTDDLGYVAEHQALLYPLREFVRECPQVKVACPAEVVGVKYLNDAVEVEIKSGEEVQTIRSKLIVGADGSRSQIRGSAGIKTRGWKYWQSCIVAFVRPEKSHLDTAYEKFQPSGPFAILPLPENRCRIVWTAPHAEAKALCELDDSQFLAELSQRFGDQMGKLELLGERFIFPVQLMQSDRYVSPRLALIGDAAHNCHPVGGQGLNLGIRDVAALAEVIQTAHAAGKDIGDIKVLKQYERWRQRENLVVLGFTDLLDRLFSNSFLPIVIVRRCGLWVMAHLPFLKVFMLKLMIGLLGRKPSLAKKVS
>NZ_AP018254.1|WP_096623952.1|4598065_4598632_+|N-acetyltransferase
MIRLATIADATQIQAIYAPFCTDSSITFETEAPSVESMEQRIHTVTQRYPWLVYQQQSQILGYVYATTHNERAAYQWSVNVSVYIHNNARRRGIGQKLYTSLFAILRHQGYYNAYAGITLPNPASMGLHNKMGFQPVGIYRQVGYKCGQWHDVIWLELKLQPPSPNPHPPIRMNQMGGDNIWERLLPN
>NZ_AP018254.1|WP_096623954.1|4598903_4600256_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase
MSFSATIAQVVDAIAAVAVNISGELLGQVCTGIQTDTRILKTGEIFVALRGERFDGHDFVEMAIERGAVAVIVDHDFPACEFPMLRVGDTLTAYQQLGRWWRDRFDIPVIGVTGSVGKTTTKELIAAVLATQGRVHKTYANFNNEIGVPKTLLELGEEHDFAVIEMAMRGRGQIAELTEIARPTIGVITNVGTAHIELLGSEAAIAEAKCELLGHMATDSVAILNYDQPLLVETSQRVWNGRVVSYGLNQGDICGSLIGGEQIQVAGKSFKLPLPGKHNATNYLAALAVAQVLNIDWDTLADGVTVEMPSGRSQRYQLPNDVIILDETYNAAPEAMLAALDMLAETPGKRRIAVLGAMKELGDHSLQLHAHIGETASKLNLDALLVLVDGRDAKEILNHAKGITSECFTSHADLVERLKNYVQSGDRLMFKAAHSVGLDRVVNQLRAELV
>NZ_AP018254.1|WP_096623956.1|4601124_4601352_+|killer-suppression-protein
MDIVFQNEKFEKECNNQRLLEKNQGKIRAKKIRQRLDDLRAANSLDEMRNLPGRCHELLHNRSGQLSLDVEDTHE
>NZ_AP018254.1|WP_096623958.1|4601344_4602454_+|HigA-family-addiction-module-antidote-protein
MSNKLQNQYVPDYVSPPGETLQEILEERGMSQAELAERTGRPKKTISEIINGKAAITPETALQLERVLGVSASFWNNREREYREALAWQQESENLQQQVAWLDKIPVKAMIKAGWIQQFQDKVEQLREVLNFFSVVSPQQWEDIWEESSVYFRKSQAFESDFGHLAAWLRQGEIEAANIPCMTYNANKFRKNLETIRKLTLEPPETFQPEVIRLCAEVGVAVVFVPQLPKTRTCGATRWLNPEKALIQLSLRYKTNDHLWFAFFHEAGHILLHGKRDFFLEGKGIQVPENEQKEAEANQFAEDILIPRAKLENFINSCQCLSKVAIEKFASEIGIAPGIVVGRLQHDNILPKSHCNDLKVRLEWAKNEE
>NZ_AP018254.1|WP_096623960.1|4602798_4606005_+|glycosyl-hydrolase-family-15
MKALTPFLNRLDYYYDQVKKIILARQNPITGLLPASTAINEHGNYTDAWVRDNVYSILAVWGLALAYRKIDDDKGRGYELEHSVIKLMRGLLFAMMRQAHKVEKFKQTQSPLDALHAKYDTATGDVVVGDHEWGHLQIDATSLFLLMLAQMTESGLQIIYTLDEVDFVQNLVYYIGRAYRTPDYGIWERGNKINHGNPELNASSVGMAKAALEAMNGLDLFGVRGSHASVVHVLPDEIARARITLESLLPRESASKEIDAATLSIISYPAFAIEDQELRDRTLNEIVTKLEGRYGCKRFLRDGHQTVIEDTQRLHYEPWELKQFEHIECEWPLFFTYLLLDALFAGDYERVKKYYRRLEALLVERDGMDLLPELYYVQQEHIEAERENPHSQPRVPNDNIPLVWAQSLYYLGCLLKDGLIAIGDIDPLGRHLRVGKHREVVIQVALIAEDEGLQNQLQLYGIETQTPKQVAPIQIRNAKELSIIYRQLGRNDKLGITGRPFRRLRSLTTSRLFRIGEHTVVFLPSFLDAQQFYLTLDYHFFVDQIRSELAYIHDHWTDLGRPMFTLMLTRTMLETGQSALLELMQELRDGICGGVRVKLGHLNQLILTANTERIDFIHSFPLNQNETKVTPWKRSYLRFQPEKSWPLEHTQEFQMECETNLELLLNHLRESENLYEQIELLQTLVRLKGMDFDTGFSGSPNYPVTVAQLLDEVYTKAGELGLWAVVRKAAGLRQMVYVGLSDVVTSILVRGKQITVGRAYSAASVISTPIPIQEITDKINAFCREDIRDRVLTQEILIYLGSINRSEPDLFKGLLTLRVGYLILLITSELASELQVTQDEAYETLMQLSPFEVKTRLRQVLSEYSGMSKLLRQQESLHIRQKESDIQWVVQPTLSKDTSEVPQIGWRRFRQAEGATGRVPKDFYKNVWLVMQHCKGLVIGDKLERRNRLDSESILAEMTPGEKNFALRVEHLLNKIESPEYRQVCIETLMELAAIAAQNPDLQIEEYLVLDVLIGYAVRVAWLEKHPDASDKYDEQKSQAWDSFYDASPSDCASYVVKAVRLLTEFAN
>NZ_AP018254.1|WP_096623962.1|4606360_4607338_+|LysR-family-transcriptional-regulator
MRLEQLQAFLAIVETGSFQSAARQCGITQSTVSRQIQSLEADLGIELFHRSSQAKLTLAGERLLPRVKKICQEWQNATQELTELKEGKQPELCVAAIHSLCAYYLPPVLQQFCHDFPEVQLRVTSLGSDRALKVLKDGLVDLAIVMNNRFLTTGKEMVIQVLYDEPIEVLTAITHPLAAYESIPWSELIRYPQVVFKDGYGMQRLIQDKFDSLEARLQAALEVNTLDAFRGVVRQGEFIALLPHSALVEARNDPTLAIRPISNSILESGNINPVITNKLEHPTLTRQVVMVTTEDRLKIPPIQKFWQLVCENIPPQSDAVLRRAS
>NZ_AP018254.1|WP_096623964.1|4607418_4608471_+|anthranilate-phosphoribosyltransferase-family-protein
MSAVFRDLLRKVGSGNHTSQSLSRTEAAIAAKMMLLAEATPAQIGAFLIAHRIKRPTGEELAGMLDTFEGFGPKFQPVSSQRPVIVFGIPYDGRSRTAPISPITALLLASVEQPVIMHGGGRLPTKYGLPLIEIWQGLGVDWTRLSLTQNQNILEKVGIGFIYTPLHFPLTNHLWEYRDQLGKRPPLATMELIWCPYAGNAHQISGFVHPPTEGMFLEAWKLRGVQQFTTIKGLEGSVDLPCDRTAIIGLGNGNGEITRLHLSASQHGFKHQNVALTTTSEFIHNILELLDGRNNILTESAIWNGGFYLWRCGICEDITTGIQKAELLFSSGAVSNTLINLRNHCLPNNS
>NZ_AP018254.1|WP_096623966.1|4608490_4609204_-|hypothetical-protein
MTKSEINSDRKPDFSHLDTSEIAALGIVRAVGYGLIILTILDWVSILTPLNVMNPVWEFQTFGQIVERVPVPLIGLAMAFWGGFINRRRGEIGFLKLLSLLTLFLALVFYLLIPLTITNTMRLDKQNTTQIDNALKQQIAQAENFEQKIDQANSEQINQLLRAQGINPGDKSLPQIKDELRSRVFQSKEQIKNQAQFTRNSRRMNLLKSSIKWNVGAVVAGTLFMYLWRATAWVREG
>NZ_AP018254.1|WP_096623968.1|4609705_4610383_-|cyanoexosortase-A-system-associated-protein
MGWKMRKNGKQIRIGLLTLTCVSAIAVLVRVSLRPKNTPLSLTPFNFPESVPLPNWQFQQSSVPPIPPKVFLKPLAQKKYQYVRNQLQLNVEMRYFSLENASMTLYIKDYTEIKSVPEIRYHPEVGFYGIGVEGNLAYLSACINPRGKATFTDAQFKQNRYKFDFQPQRLLSWLIHDEPLLDRRCLWTHFSLPISNPSQSQQKINYLETAWFDWYAWWKTRFPPL

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Crispr_ID: NZ_AP018254_43

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_43

4891267-4891341

Orphan

Consensus_repeat	Method
TATTTCAGCCAACCTGTACTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_43

>merge|NZ_AP018254|43|4891267-4891341|CRISPRCasFinder
TATTTCAGCCAACCTGTACTAGATAAAAGTTCTGACTAATTAATACTCGGTGTATTTCCGCCAACCTGTACTAGA

>NZ_AP018254|43|41|4891267-4891341|CRISPRCasFinder
TATTTCAGCCAACCTGTACTAGA	TAAAAGTTCTGACTAATTAATACTCGGTG
TATTTCCGCCAACCTGTACTAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096626434.1\|4900901_4902239_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096624358.1\|4895229_4897623_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|276809
NZ_AP018254.1\|WP_096626428.1\|4870441_4871629_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235056
NZ_AP018254.1\|WP_096624338.1\|4871705_4873451_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213023
NZ_AP018254.1\|WP_096624366.1\|4905989_4907795_-\|CHASE3-domain-containing-protein	unknown	unknown	gnl\|CDD\|226702
NZ_AP018254.1\|WP_172892843.1\|4877632_4881775_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_AP018254.1\|WP_096626437.1\|4905357_4905792_-\|response-regulator	unknown	unknown	gnl\|CDD\|381108
NZ_AP018254.1\|WP_096624340.1\|4874154_4875357_+\|response-regulator	unknown	unknown	gnl\|CDD\|381129
NZ_AP018254.1\|WP_096624346.1\|4882756_4886467_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_AP018254.1\|WP_096624364.1\|4902873_4903980_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096624342.1\|4875530_4875893_+\|response-regulator	unknown	unknown	gnl\|CDD\|381116
NZ_AP018254.1\|WP_096624336.1\|4869077_4870091_-\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|223643
NZ_AP018254.1\|WP_096624356.1\|4894683_4894911_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626432.1\|4893489_4894161_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_AP018254.1\|WP_096624362.1\|4900307_4900895_+\|L-threonylcarbamoyladenylate-synthase	unknown	unknown	gnl\|CDD\|223088
NZ_AP018254.1\|WP_096624360.1\|4897893_4900239_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|100079
NZ_AP018254.1\|WP_096624348.1\|4886614_4888015_-\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|215283
NZ_AP018254.1\|WP_096624354.1\|4892507_4893344_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_AP018254.1\|WP_096624350.1\|4888189_4890913_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NZ_AP018254.1\|WP_096626430.1\|4876171_4876645_+\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096624358.1\|4895229_4897623_+\|ATP-binding-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.97949e-05
NZ_AP018254.1\|WP_096626428.1\|4870441_4871629_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235056	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.	0
NZ_AP018254.1\|WP_096624338.1\|4871705_4873451_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213023	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes bacterial poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, hemin storage system HmsF protein in gram-negative species, intercellular adhesion proteins IcaB, and many uncharacterized prokaryotic polysaccharide deacetylases. It also includes a putative polysaccharide deacetylase YxkH encoded by the Bacillus subtilis yxkH gene, which is one of six polysaccharide deacetylase gene homologs present in the Bacillus subtilis genome. Sequence comparison shows all family members contain a conserved domain similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, which consists of a deformed (beta/alpha)8 barrel fold with 6 or 7 strands. However, in this family, most proteins have 5 strands and some have 6 strands. Moreover, long insertions are found in many family members, whose function remains unknown.	3.29241e-49
NZ_AP018254.1\|WP_096624366.1\|4905989_4907795_-\|CHASE3-domain-containing-protein	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	6.8781e-50
NZ_AP018254.1\|WP_172892843.1\|4877632_4881775_+\|GAF-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.84216e-67
NZ_AP018254.1\|WP_096626437.1\|4905357_4905792_-\|response-regulator	gnl\|CDD\|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.84121e-62
NZ_AP018254.1\|WP_096624340.1\|4874154_4875357_+\|response-regulator	gnl\|CDD\|381129	cd17602, REC_PatA-like, phosphoacceptor receiver (REC) domain of PatA and similar domains. Nostoc sp. (or Anabaena sp.) PatA is necessary for proper patterning of heterocysts along filaments. PatA contains phosphoacceptor REC domain at its C-terminus and an N-terminal PATAN (PatA N-terminus) domain, which was proposed in a bioinformatics study to mediate protein-protein interactions. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays. Some members of this group may have an inactive REC domain, lacking canonical metal-binding and active site residues.	1.88838e-41
NZ_AP018254.1\|WP_096624346.1\|4882756_4886467_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	2.34066e-127
NZ_AP018254.1\|WP_096624364.1\|4902873_4903980_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.01169e-49
NZ_AP018254.1\|WP_096624342.1\|4875530_4875893_+\|response-regulator	gnl\|CDD\|381116	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators. OmpR-like proteins are one of the most widespread transcriptional regulators. OmpR family members contain REC and winged helix-turn-helix (wHTH) DNA-binding output effector domain. They are involved in the control of environmental stress tolerance (such as the oxidative, osmotic and acid stress response), motility, virulence, outer membrane biogenesis and other processes. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.30968e-33
NZ_AP018254.1\|WP_096624336.1\|4869077_4870091_-\|potassium-channel-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	8.66943e-31
NZ_AP018254.1\|WP_096626432.1\|4893489_4894161_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	1.15009e-06
NZ_AP018254.1\|WP_096624362.1\|4900307_4900895_+\|L-threonylcarbamoyladenylate-synthase	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	2.38303e-50
NZ_AP018254.1\|WP_096624360.1\|4897893_4900239_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	6.61307e-47
NZ_AP018254.1\|WP_096624348.1\|4886614_4888015_-\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|215283	PLN02518, PLN02518, pheophorbide a oxygenase.	4.37104e-95
NZ_AP018254.1\|WP_096624354.1\|4892507_4893344_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	2.1781e-120
NZ_AP018254.1\|WP_096624350.1\|4888189_4890913_+\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	1.63178e-117
NZ_AP018254.1\|WP_096626430.1\|4876171_4876645_+\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.25159e-24

>NZ_AP018254.1|WP_096624350.1|4888189_4890913_+|CHAT-domain-containing-protein
MTYPRFKSSLHRWGRSYRRWQRLFLPLITAVAVSVASPAWTQISSVPGNNLNANVNAIAQNRSTTETEARRLYQAGKYQDAAKFFRKAANEYQAAKDPIRQALSLSNLSLCHQQLGAWPEADQVITEAVNLISSIKNNQPATELARAQILDIQATLLLARGRGEAAVPIWEKVAKIYTQQKQPQQALISQVNQAQALQNIGLYRRAVKVLETALNLSDVRFTEPEKLKPALEKLAANRENLMALRSLGDCLRVTGNVNQSQVILERSLAIAQALNSPELIALVNLTLGNTARAKLVIDQPIDATIQPASTQTAIQYYQQAATLPGSLRIQALANHLSLLVDSRQISAAKNLLPTLKQELAGIVTGRTAIDGRINLAFNMMRMRQQDPTSVPIKEVADTLAVAIQQAKKLGNPRIYADALGTLGNVYEQNQQWAEAQKVTQEAVQVAQQSRADDIAYRWQWQLGRVLAAQKKNEQAIASYQEAVNTIKSLRADLAAASPNVQFSFRDAVEPIHRQLVSLLLKSTQDNSLKSARDIIEGLQLVELDNFFREACLNAKPEQVDQVDEKAAVVYPIILDKELAIVTSLPNLGQAEKSQEKRLFRYYKTDIPRDEVEKLAIRLRESFNQDTTSDLARPQLQRMYDLMLRPAMKDIDNSKVETLVFVLDGVLRSVPVAALDDGKQFLIEKYSIALTPGLQLLTPKALKQESLRALVAGISEPRSNFSALPFVKSEIRKIESEIPSQVLLNETFTNREFQARISNAPFPIVHLATHGQFGSTLDTTFILTWDGQIKVNQLSGLLQTVELSQDKSLEMLILSACETAAGDARSALGLAGVAVRSGARSTIATLWRVNDEASADLMSIFYEELRQINQSGISKAEALRRAQVKILKTPQYNSPYYWAAYVLLGNWT
>NZ_AP018254.1|WP_096624348.1|4886614_4888015_-|Rieske-2Fe-2S-domain-containing-protein
MQTVSSVVERSQSPQLLGGGDDPHRFDCAEAWYPVHYVEDLDRSKPTPFTLLGRDIVIWWDRNGDCWRVIDDQCPHRLAPLSQGRIAEDGLIECPYHGWAFTGEGTCVRIPQQPEGGQAQTSQRACVASLPTTVKQGLLFVYAGNPENAAKTRVPIIEPLEENGDDWVVINTFRDLPYDALTLLENVLDASHVPFTHHNTVGKRSNAGPVELEVLESGKHGFVGTWAEGPRKGQLGRQDTKFIAPCLMWHDLTSKQYGRTMTVVYATPIRKGECRLFARFPFKFASKLPGFLIKLTPKWYSHLGQNGILEDDQIFLHYQERYLEAKGGSAKVAKAFYLPTKADLFVFEYRNWLSQFQADPFPGQTLPPPLPTNQLLDRYHSHTKHCRSCREALTWIQNIREKIAIAIFLLVTITPLLSTIWDERSQFITIITTSLSLLLAAGWFGLGKLAKGFYEGREIPPRNIDK
>NZ_AP018254.1|WP_096624346.1|4882756_4886467_+|hybrid-sensor-histidine-kinase/response-regulator
MITDSSIREQGYIYFLEEAPELLQTIEADLFSLAGDFSTAKVHNLMRATHTIKGGAANVGLEVINKIAHSLEDIFKALYNPDVELDGELQTLLFQAFECLQLPVTAEISGTSIDADEILQRAAGVFAQLQEKLGDAFGADTYIPTSEELGFDIVLSIFETGVSQRIDSIAEILENPPGNDELVDFLQTQGEVFLGLAESLNLPGFAAIAKAMVDALSRNSHRAVEVGNAVLADLLAARAAVQGGDRVRGGEVSPRLLELAQGVDSSGSDVDSLPLSATTVINTDYHQNQDNQDINIATGEQELIAPRQNSLRDEIEAFYRFLTQGNHKNYKPIKPTSAKFYLKVIRYILGWFNHELEIPESELKLQLLIPIRGIESTLDYLENWLREFFVFLDEFGEGESLRLYRQGVIYTIILALAQFLDGEPQLIRVLQERIQTLANEYKTYPPITNQEKNWLDSPKLQALLEVKKYPASSHSPFSSSENREEMMEAIWGENLPANSNSFPNNLVEDLVPENQPIESDSASQQENTIIESTSIPPSPAINHPHPADSTSEEKPTTPRHRSFVRVDVEGLHKLNYLAGELLIYQKRRSLLDEQLHQVIEKLFSQLSRHQNTLNELREIPLQGQSFTSHQTRNVASVNFDALEMDEYTEYQLTLHSALEESLQLQETAESLDLILRNSIQVHDKKQILALNIIDNLVEARMSPLGNILNRFPQMIQNLANLYKKQVEMKLVGTQVLVDKAIAEKLYDPLLHIVRNAFDHGIETPEERLSKGKPETGTIEIRAYHQGSQTIIEVRDDGKGLNFEKIRQKGLELGLLTNPQSSEDELVDLLFSPGFSTAGKVTDISGRGIGLDIVKTQLRALNGDITLYSRPHQGTTFILKIPFSMTTEQLMLVQAGGATYALLLDSIEKILLPSVTQIRELEGRRVLYWQNGDDEQIIAIRNLAELMHYNSSFVSGASLTHGTTTLDTQDIDNPILILQNGSELLGLQVDQIIGEQELVIRPLGNAIAPPKYIYGCTSLANGNLILVVDGALILTSHQMYPPFETYHQPVLSPSKPTALPISRNETTTAYLESDNLDSFAGMEDAGIKLPSLPASEIPLTVPRWVLVVDDAISLRQTISLTLQKYGYQVIQAENGIEALEKLQHHPEISLVISDLEMPRMNGFELLSHVRQNPSIKDKPIVILTSRSAEKHRQLASALGATAYLTKPYLEHEFLATVEGIFRENSPSPSQKLLGSAT
>NZ_AP018254.1|WP_172892843.1|4877632_4881775_+|GAF-domain-containing-protein
MQGQTWGLLVVHQCQKTRVWSESEISLLTLVADELGDCLQILELHQQQQLQAQEYKSLTKVIDKIQRASSLEQILQTTTQAARQLINCDRVSVYQFHPDWSGEYVCESVAPGWTPLVGGGIKTVWEDTYLQETQGGRYRHHESMIVHDIYTMGFSPCHVDLLEQFQVRAYITVPVFSGQKLWGILAGYQNSETRTWKESEIELFKHFASSLGVAVSQQESLQQMQIQAQQQAKIATQEKAIAKLISRIRQSVDIKDILTATTQEIRQLLSTQRVGVYRFNPDWSGDFVAESAAPGLVPLMDKGLEKEVLQENGHCQTLQGLATIYKSHDNYLQNTQGGRYQQKTAFVVNDVEKAGFPDCYMHLLEQLEAKAYMTAPIFNGEKLWGLLTVYHSEGARDWQESEINLIKQVAVQFGTAISQAEYIQQTQAQAEKLANTAKRQQDLIALTRKIGEALVEKVTNTSQLEAILQTTVAEVRRLLQTDRTVIYRFNPDWSGDFIAESVAPGWLPFQEKLQNQQINQDLLKENGHCDSIRSLTSIYKQKDSYLQENQGGRYQQKTTFVVNDVTQENFPACYTELLDQFEAKAYLTVPIFKGDQLWGLLASYQHDRTREWQEAEINIMQQIAVLVAVAIQQAQSFEKLEQQSQQATKAAEIDQAVGKVIDKIRKSSDIDSIFHTTTKEVRNLLQADRVVVFKFNPDWSGNFVAESVGANWVRLVDGNHQTYWADSYLQETQGGRYRNREYFVANDMYTAGHAECHLEILEQYQARAYVIVPIFQGENLWGLLAAYQNSGTREWQQLEINLLMRIGDQFGVALQQVEYLQQLERKTQEVQRVAERDRAATKVIDKIRQSIDINEIFSITTKEVRGLLNTDRVAIYRFNPDWGGVFVAESVAPGWVSLVEKQNQIPQLQENISNCLGAGGLLTASDKAQGKQVKDTYLQATQAQELRDRTAFVRSDIHNSGFSQCYVDVLDEYQAKAYAIVPIFQGEKLWGMLAAFENKGTREWAELEVSLLTRIANQLGTTLQQTEYLETLKQQSAQLKAAAEREKQNTEQFQKQAMQLLAAVRPALDGDLTVRAPITEDVLGTIADAYNNTLQALRQIVSQVLGAAEQVAARSNESNASLGSLTGLARQQSKEINEALMEIQQMVDSTQAVVDNAEIVQTTVKQASQTVEKGDAAMNKTVEAIQAIRETVAQTSKKIKRLSESSQKISKVVNLISNFATQTNVLALNAAIEATRAGEYGKGFAVVADEVRSLSRQSAAATIEIEKLVQEIQEETGEVAVAMETGIQQVVEGTNLVSETRQSLNEIVTATEEISELLNKITEATQGQMMQSVSVTASMKDVAQIANKTSSETNNIAVVFQQLSEMAEELLNSMSKFKVN
>NZ_AP018254.1|WP_096626430.1|4876171_4876645_+|purine-binding-chemotaxis-protein-CheW
METEEKVLSFCLGNQDTAVIPLANITEVFQVSLNDVCGVPEMPNCIQGIYNWRGEMLWLIDLELMLGYASLSYRSNITAKMMVIVIQYEGKYLGLLVRQLMDIERLNSGAIKLANSQLFPHEVLPFLRGYFINESEKMIIAINPESIFNAPYWQIHN
>NZ_AP018254.1|WP_096624342.1|4875530_4875893_+|response-regulator
MSTVLVVEDGLTDMEILCRYLQQAGHSVISAKSSEEAQEQLVQKTPDLIFLDVILPGKSGYEICRELKNNPSTSNIPIIFCSTKNSDVDKMWGTMLGADGYISKPIDPEELAGTLKQLIK
>NZ_AP018254.1|WP_096624340.1|4874154_4875357_+|response-regulator
MIHPDLMVSNNLIEEFKVCTRLQYSGKLDIRTAKGDRWAFYYRLGRIVWATGGKHPFRRWRRNMAQFCPDIDVEKIQLQPSDAEIDYWDYRLLETLHDRQKVRREQINSIVESTITELLFDLAQSTNFNPITCDRNQDVILETPMSFTSADMSLKYMQDTWKNWSEAGLANFLPDSAPILRRPEQLQQQVSPAVYKNFVVLMNGKYTLRDLAFRMKQGILPVTRSLLPYILKGIIELIEVPDIPLRISEVKKNSATPIKSTPSGPLIACVDDSPQVTQMLEQILAPNGFRFIKIQDPLQALPILIEHKPDLIFLDLVMPVASGYEICAQLRRVSVFTHTPIIILTGSDGLLDRVRAKVVGSTDFISKPVAADKVMGVVRKYITVPASGLNRTNQQATAMG
>NZ_AP018254.1|WP_096624338.1|4871705_4873451_-|polysaccharide-deacetylase-family-protein
MPNQKSRVKNFLFVFFGTLLFITGLWAADFFWFSPINTSQTSPSNIFPWQTPEPVLSLAEICDKYQSLDKNITIANNQSLAASPLVFTSSQFPEKFTLNTQTFPLISEAASKAKVPILMYHDILSKKEVFFDVTPTELENHFELIKSQQATPISLNQLIIHLRTGIPLPKKPILLSFDDGYGGHYEYVYPLLKKYNYPAVFSIATRYVGDNTGRTHVSWEDLKIMAADPLVTIASHSVNHPADLTKLSEQDLTTEIIESKRVLESKLGIPIHYFTYPAGKHNDKVKELVQNAGYIAALSMDDAKEIFAGESVDLFAIGRFGQSQIQKVLPQANGGANLPLCGLDFQADIRKEEKKIEGISFVFVSGGKPVTIHADSRYQIEDIVKGTGAVAAVDGTFFSLKSLNSNIMIGPVLSKIGHGFIPGYRGEIPKLKGRPLVLINDKTVKFVPFDPDKHNTLTGIQAEMNPVNDIFVAAAWLVRDGQPQPAKSFNNLYGFDAKRYRAFWGINQDGQPEIGISRDNVDSIQLGKILAEEGFVEAVMLDSGDSTSLVYQGKSMSRYRPRPVPHAVALFPNQVKTTRGM
>NZ_AP018254.1|WP_096626428.1|4870441_4871629_+|aspartate-aminotransferase-family-protein
MSTYARFPIALEKGLGCRVWDTQGREYLDFVAGIATCTLGHAHPAMIESVTQQIQKLHHVSNLYYIPEQGELANWLVSHSCADRVFFCNSGAEANEAAIKLARKYAHTVLEIEHPIILTAHASFHGRTLATITATAQPKYQKYFDPLVPGFHYVPYNDINAVEAAVSELDEGNYRVGAILLEPLQGEGGVRPGDIAYFQKLRQICDETGILLIFDEVQVGMGRTGKLWGYETLGVEPDIFTSAKGLGGGIPIGAMLAKKFCDVFQPGEHASTFGGNPFACGVALSVCQTLEREDILTNVVNRGEQLRQGLRLLAAKYPHIVIDVRGWGLINGMELSPDIPYTAADVAKAAMEQGLLLVPAGPKVVRFVPPLVVTAADINEGLARLEQALVNIINH
>NZ_AP018254.1|WP_096624336.1|4869077_4870091_-|potassium-channel-protein
MAGAIALAVVFIIGTLWYSLVEGWSWQDAAYMTIITLATVGYGETRPLENRGRLFTIALILMGLVSIGYIVNRFTEAIIQGYFQEGIKLRQLRRLMDSLIGHYIICGFSRTGRQIAKEFWAEGVPFVIIDAEVESVRMAQMEGYNVYLGDATLDESLLEVGVERANCIVAALPSDAENLYIIISAKTLNPQIRVIARASTEEGLQKLQRGGADVVISPYITGGKRMAAAALRPQVMDFVDGIISGNDRQLYMEELLIEPGTCAFVGETLQKAELRSQTGALVLAIRRADGTLIGAPTGDTLLMAGDILICMGTAEQLRNLNQILSPITSKQIRRPRS
>NZ_AP018254.1|WP_096624354.1|4892507_4893344_+|type-1-glutamine-amidotransferase
MTAQVLELTIGWLYPKLMSTYGDRGNVITIERRCQWRGFGVKVVPLDQDATPADIRSVDIIVGGGAQDRQQELVMRDLQGAKAEAMREKIEAGTPGVFTCGSPQLLGHYYEPSVGQRIEGLGILDLVSVHPGENTQRCIGNLVIEVTATKLASDLKEMTGMTPYLIGFENHGGRTRLGNVEALGRVVYGLGNNGEDGSEGAFYQNAIATYSHGPLLPKNPFVADWLIQTGLRLKYQQPIQLSPLDDELAVYARQAMLKRLNVQITAVDNQPVAVKSAS
>NZ_AP018254.1|WP_096626432.1|4893489_4894161_-|S-layer-homology-domain-containing-protein
MKFKLLRSIYLILLLQFLPSMALAQPSDPINQIVALKWMDNLGDGKFYPERFISRGELASIMVRVFRLDLRQDLNPQDIRVVDVPPQHPHYRSIQTVLKTNIMQGYRNNLFFPNQQITRAEAIAIFAQAYGVFQFPDQTVNEFLSKFPDQNSIPTWARRAIATVVAEGFINPEQNKYLQPLQPMTRGDMALLLNAYRERNQPQPETPIVPKANFESEGVGNRE
>NZ_AP018254.1|WP_096624356.1|4894683_4894911_-|hypothetical-protein
MTTNRYNPMFRLVVRLIKYFLLMIAGFAIAYLLSHLFGLSALAVSAFPSVTQLIITTGLILMSVLGLLIVVESAK
>NZ_AP018254.1|WP_096624358.1|4895229_4897623_+|ATP-binding-protein
MGAEEALNFIDQLVFNSRGRHLDIPQRLLLRELWQDCKRRYEDIAQQSGYSSIYLREVGAELWRVLSDVLQEKVSKTSFSGAVKRLWHQQHPSEHSMISTQLVNPVINSGINKNNDSNPNINHQTNINTNFLGRDRELQDLDAAVGNGAKIILIQGRGGVGKTTLARKFFKTRYFDVILELWMATERQNLTPAETVIEEWLRRDFNEEPGRDFGINLERLRRKLRDSGYKIGVLIDNLDTALDRDGKLIDTRRPYVELLRVLADPGVNSTTIITSRERLCEAAIEVYSYPLKGLNADAWRHFFRSRELDSQSDIITEMCHAYGGNPKAMQIICSAIITDYNREIDPYWQENRNNLLSERQLNDLVTSQFNRLEQTNQEAYNLLLRLGCYRYQDITSVPLAGVLCLLWDVPELQRRRAVKILQDFSLLEVKKGQYWLHPVIRDEAIARLKFTSEWEQVNRIAAQFWTDYVQIITEIDDALMALEAYYHYLEIGDYAEAGNVILLRRGSLEKIPLPLGCSLYHLGLLQKIISAIAPIIHNIKNNESRVQLYNILGYSYRIIGNLKEALKCHQAAQRIVDTSYLSRHRMSTLLNLGLCRMELGELEDARYFFETVIQLVMEANTRFEYMAFCQVNLACIDSLLGDNDEIHTLVKNAEESVYNTRLTTWGYAYCLLFLAFTYKNLGDLDRSLQLCQQVISYSEENNFTQVQGKAISCLAEIKREQNLLTEACIEHQKAIEILKKMGAKCDLAEAYYQCAITQRKCGQWNLSNDNFVQAMNIFTEIDAPKQFEKVKSRMNLD
>NZ_AP018254.1|WP_096624360.1|4897893_4900239_+|tetratricopeptide-repeat-protein
MWIIAVLICLGWIVSLCLHEFGHAITAYWGGDKSVKEKGYLTLNPLKYTDPGVSLLMPLLILMIGGIALPGGAVYIDHQSLRDRKWESAVSVAGPFADMVIAVVLSIPFIFGWHNAILDGSGGDSWWMYIYPAIAYVINLNIFVVLINLLPIPGLDGFGIIAPWLPRQIKPRINWLYRYGIWILMGLLWFVPPLSRGLWEITFMLGNVLQVPRELIFVGSEGFRQYSVFLVLGLIGFLWIFRDKNKDQYRRGSQLVSQGKYDQALIKFDALVQRQPDNPDALFMQGYTLYCLGRYDDALTAYARALEFQPNSAQIYYYQGILYQEVADAAAAIASFTRAIQENPEDTKSWQKIAELQFAQQANTEALTAINQALELEPNQAAAWELKADILKNLHQTTEAIAAYHQAFNLNPNSTAWIKLVKLYEQIHTPAQDQTENLLAIYTRKLRLQPHNPEIWYRQGISYNKLQRPQEAATSYQQGLAYLTHQTKRHPRNPQAWLEQAKYLEKIHRHPEAETAYQQAATLLERKLQRQQQQSTAEDWYEYGLILEKIQQPTPAITAYTQAIALDPKLEQAAYQITLIHIHNQAYHQALTSCDQVLENRPTDSSMWWLRGDILIKLEKYEQAIAACDRAIKLFPEFYGFWLSRGTALYYLHQYTDAHAAYDTATQTQPESAKAWNYKALALIKLAQSATDLPVSPVFDNTKLLNDAMIALEKAIKINPNYGDAWYNQACILALQNNHYSAIIALTQAIKIEPEQYRYLAQQDQDLINLHQHPDFNKLMK
>NZ_AP018254.1|WP_096624362.1|4900307_4900895_+|L-threonylcarbamoyladenylate-synthase
MTQVTLETLIQGALAGKIISFPTDTVPALAVKPELAELIFQAKQRRQDKPLILMTATIAEIWDYVVGSPTELEIWQQVAAKYLPGALTLVLPSSPRVPATMNPQEPTTIGVRVPNLELAQTILQQTGPLATTSANLSGQPPLMTIPEINAQFPQVLTLTPDFDTVSIGKPSTVIKWDNGQWQILRQGSIEFNWEL
>NZ_AP018254.1|WP_096626434.1|4900901_4902239_-|hypothetical-protein
MIEKLQRANHLYQSLNDFILEAEGELAVCLEKFSAEKLTKLSPSQGSHNHQMVLDLFTTEGNINYQTPIDIYIQQQTDLNDVDRQILQKWYRSFVGLFTVEKISENGLVLKNWLTAKIYHLQIKNKQEEQQLTRIKPGEILLTRISPLDAENWIFSGPFTLMGKLGKPKLAIAIGNFKQNFPNYLYADAPELLQEAWLSVEWYHQQFLNYFGSTEITMSGKELAVKLKQFQQQLAENRLEKVGIDTSKSLQQLATESGISDSEMQTNLETMGIDSQTSQEIFQHPLTSKMVTPKVELPPHILHAQTVTTLSHPQWGQVFLTDYLEFTQLLASTPWQKTPEAEKLVREYLSKPEVHPGIWQNLAAKYPRQLEIILQDIVNRPDWKLESDLHQLLQQYNKPPRPQLPEIASVPIHLHNLFEEALIEVNRKNKSKNKSKTKSKTGFQL
>NZ_AP018254.1|WP_096624364.1|4902873_4903980_-|hybrid-sensor-histidine-kinase/response-regulator
MMALKTTQKDTILIVDDIFDNLIAAQAILEEEGYEIRLEEDSITAFEQVKNSPPDLLLLDVMMPELDGYEFTRRIRQDTTLPFIPILLVTAHDESNVVEGLNAGADDFIRKPVNPDELQARVRCLLRLKHSIDERDRMTKLREDFVSRFAHDLKIPLAASNRILQLMVKGQFFEVTPELREILQNMITSNGDLLTMVQNMLEVYKFEAGCKSFNFVKCNLTDLVQSVGLELAPLAVEKNLQLTIDLPTSEKIEVSGDRIELRRVLTNIIGNGIKFTPKGGVTVRLQVIDGKAVVEIEDTGVGISPEEKTRLFERFRQGKKQGTGSGLGLYLSRCIIESHQGEIHLSSELGQGSKFTILLPIIPPEVNT
>NZ_AP018254.1|WP_096626437.1|4905357_4905792_-|response-regulator
MPNRIMSILLVEDDEVDIMNVQRAFKKGNILNPLYIAANGLEALAMLRGTADQPPEVPNERRLILLDLNMPKMGGIEFLQKLRSDEKLRHIPVVILTTSNQDRDLVEAYNLNVAGYLLKPVDFVRFVELMATLNKYWSLSEMPR
>NZ_AP018254.1|WP_096624366.1|4905989_4907795_-|CHASE3-domain-containing-protein
MVEKTGTNLINRCFNHLPVRYRGAAIIAIPAICLFASLAAWVISRDGALQVYRQIDKSKTIIIHTNGYLKTLLDAETNSRGYALSRNPIFLDSYNQAINRLPSIRNHLERSLYNQNQKKRYQKLEGISQRLIASLNRRNQLVQNNLNDILNQEQEKIVLTNKANMDKARELINQFQEAEWRRLTENQNRFDDLYRTTNLIIWGSVIMSIFSYLAAIYLYSNLDWRLQGQQLALNQNSVLLQGIFENVVDGIIVVDAENCIENLNSAAEKIFGYTANQVIGRDLGVMIRERTEADHPITWNHEQINKMKVFSALAYIKEQTYLPVEISISTLPTDNRKIVIIRDISEREEAQAKLEANIKELSQLRLMLANANQNLSDRNQELDQFAYVASHDLKAPLRAIANLSTWIEEDLGDNIPLENKKQLQLLRQRVNRMESLLNALLDYSRVGRMQTEPENVDVHQLLAEIIDSLDPPRGFTIEIRTEMPTLMTKRLLLRQVFANLISNAIKHHPRDDGNVYISAIPTDKYYEFQVSDDGLGIAPEYHHQIFTIFQTLQPRDSKESTGVGLAIVKKIIESEGGSIHVISQVGEGATFSFTWPVLENQ

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Crispr_ID: NZ_AP018254_44

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_44

4956138-4956292

TypeV

Consensus_repeat	Method
GGGGTGAATAAATTACCTCTGGAAGCTCCTCC	CRISPRCasFinder

2 spacers

PD-DExK,Cas14c_CAS-V-F

The CRISPR arrays of NZ_AP018254_44

>merge|NZ_AP018254|44|4956138-4956292|CRISPRCasFinder
GGGGTGAATAAATTACCTCTGGAAGCTCCTCCACTGGCTTGTCTTGGCGCTCCCTGCGGGGTGAATAAATTACCTCTGGAAGCTCCTCCGGTGGCTGTAGTGGGAGCGCCCTTACCTTGTCTGGGAACGAATAGACTGCTTCTAGAAGCTCCTCC

>NZ_AP018254|44|42|4956138-4956292|CRISPRCasFinder
GGGGTGAATAAATTACCTCTGGAAGCTCCTCC	ACTGGCTTGTCTTGGCGCTCCCTGC
GGGGTGAATAAATTACCTCTGGAAGCTCCTCC	GGTGGCTGTAGTGGGAGCGCCCTTACCTTGTCTG
GGAACGAATAGACTGCTTCTAGAAGCTCCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096624444.1\|4962744_4963140_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_AP018254.1\|WP_096624442.1\|4961477_4962656_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14c_CAS-V-F	-	gnl\|CDD\|223747
NZ_AP018254.1\|WP_096624426.1\|4948431_4949067_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP018254.1\|WP_096626447.1\|4945024_4945600_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|227672
NZ_AP018254.1\|WP_096624436.1\|4956749_4959332_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227328
NZ_AP018254.1\|WP_096624416.1\|4944169_4944484_+\|microviridin/marinostatin-family-tricyclic-proteinase-inhibitor	unknown	unknown	gnl\|CDD\|372187
NZ_AP018254.1\|WP_096624428.1\|4949085_4950717_+\|cyclic-peptide-export-ABC-transporter	unknown	unknown	gnl\|CDD\|226968
NZ_AP018254.1\|WP_096624448.1\|4965518_4965701_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|280560
NZ_AP018254.1\|WP_096624438.1\|4959682_4960282_-\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP018254.1\|WP_157780796.1\|4965166_4965316_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096624422.1\|4946882_4947086_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376468
NZ_AP018254.1\|WP_096624432.1\|4952025_4954806_-\|CHASE2-domain-containing-protein	unknown	unknown	gnl\|CDD\|226703
NZ_AP018254.1\|WP_157780795.1\|4960329_4961247_-\|S-layer-family-protein	unknown	unknown	gnl\|CDD\|225751
NZ_AP018254.1\|WP_096624446.1\|4963685_4965023_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_AP018254.1\|WP_157780793.1\|4945766_4946369_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|227672
NZ_AP018254.1\|WP_096624424.1\|4947308_4947920_-\|methylmalonic-aciduria-and-homocystinuria-type-D-protein	unknown	unknown	gnl\|CDD\|370900
NZ_AP018254.1\|WP_096624418.1\|4944651_4944996_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|227726
NZ_AP018254.1\|WP_157780794.1\|4959353_4959530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626449.1\|4963349_4963601_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096624430.1\|4950724_4952026_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|381147

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096624444.1\|4962744_4963140_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.11457e-47
NZ_AP018254.1\|WP_096624442.1\|4961477_4962656_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.48982e-49
NZ_AP018254.1\|WP_096624426.1\|4948431_4949067_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.77395e-20
NZ_AP018254.1\|WP_096626447.1\|4945024_4945600_-\|ATP-binding-protein	gnl\|CDD\|227672	COG5381, COG5381, Uncharacterized protein conserved in bacteria [Function unknown].	7.7799e-39
NZ_AP018254.1\|WP_096624436.1\|4956749_4959332_-\|CHAT-domain-containing-protein	gnl\|CDD\|227328	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown].	1.68512e-142
NZ_AP018254.1\|WP_096624416.1\|4944169_4944484_+\|microviridin/marinostatin-family-tricyclic-proteinase-inhibitor	gnl\|CDD\|372187	pfam12559, Inhibitor_I10, Serine endopeptidase inhibitors. This family includes both microviridins and marinostatins. It seems likely that in both cases it is the C-terminus which becomes the active inhibitor after post-translational modifications of the full length, pre-peptide. it is the ester linkages within the key, 12-residue. region that circularize the molecule giving it its inhibitory conformation.	1.10773e-05
NZ_AP018254.1\|WP_096624428.1\|4949085_4950717_+\|cyclic-peptide-export-ABC-transporter	gnl\|CDD\|226968	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	1.5103e-133
NZ_AP018254.1\|WP_096624448.1\|4965518_4965701_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|280560	pfam02416, MttA_Hcf106, mttA/Hcf106 family. Members of this protein family are involved in a sec independent translocation mechanism. This pathway has been called the DeltapH pathway in chloroplasts. Members of this family in E.coli are involved in export of redox proteins with a "twin arginine" leader motif.	5.13577e-17
NZ_AP018254.1\|WP_096624422.1\|4946882_4947086_+\|hypothetical-protein	gnl\|CDD\|376468	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA. HypA is a metallochaperone that binds nickel to bring it safely to its target. The targets for Hypa are the nickel-containing enzymes [Ni,Fe]-hydrogenase and urease. The nickel coordinates with four nitrogens within the protein. The four conserved cysteines towards the C-terminus bind one zinc moiety probably to stabilize the protein fold.	3.41276e-05
NZ_AP018254.1\|WP_096624432.1\|4952025_4954806_-\|CHASE2-domain-containing-protein	gnl\|CDD\|226703	COG4252, COG4252, Predicted transmembrane sensor domain [Signal transduction mechanisms].	4.27688e-127
NZ_AP018254.1\|WP_157780795.1\|4960329_4961247_-\|S-layer-family-protein	gnl\|CDD\|225751	COG3210, FhaB, Large exoproteins involved in heme utilization or adhesion [Intracellular trafficking and secretion].	8.56985e-19
NZ_AP018254.1\|WP_157780793.1\|4945766_4946369_-\|ATP-binding-protein	gnl\|CDD\|227672	COG5381, COG5381, Uncharacterized protein conserved in bacteria [Function unknown].	3.87829e-24
NZ_AP018254.1\|WP_096624424.1\|4947308_4947920_-\|methylmalonic-aciduria-and-homocystinuria-type-D-protein	gnl\|CDD\|370900	pfam10229, MMADHC, Methylmalonic aciduria and homocystinuria type D protein. This entry represents methylmalonic aciduria and homocystinuria type D protein and homologs. These proteins are involved in cobalamin (vitamin B12) metabolism.	0.00169348
NZ_AP018254.1\|WP_096624418.1\|4944651_4944996_-\|STAS-domain-containing-protein	gnl\|CDD\|227726	COG5439, COG5439, Uncharacterized conserved protein [Function unknown].	2.53583e-39
NZ_AP018254.1\|WP_096624446.1\|4963685_4965023_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	0.00211586
NZ_AP018254.1\|WP_096624430.1\|4950724_4952026_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.43191e-54

>NZ_AP018254.1|WP_096624432.1|4952025_4954806_-|CHASE2-domain-containing-protein
MWKQIQTLIKNTRSVLIITPSVALTVIAGQYLGLFNLPEWKVRDEWVRRRSSGKIADEIVIVTIDERDIQSVGKWPVPDWSLAKLLAKINQQQPRAIGLDLYRDLPEGKGHEQLVEIFRSTPNLFGVEKITGERVNPPPELKKHERVGLADLVLDGDRHVRRALLTAEDSQEDGKIKAGLATLVALKYLEAESISLESVDEQQLKFRLGKAIYQPLKNQEAGYGETDLGGYQILLNWHGGETAFKTVTMRDVLAGKIPPDLMRDRMVFIGSTATSTNDFFSTPFSSSLISAQKPTPGVVIHANIALQLVRGAKTGKTSLRGLPGSFLLGWVWLWSAIGSVGSWYLASIPNKYRIPGGKILWSTLGMGGILLVGCYGMFTIGWLIPLTPALLSLIASAIATTNAYKQQKLEAANQQLAINNELLRDYSKNLEIKVEERTRELLLAKQAADAANQAKSEFIANMSHELRTPLNGILGFAQVLGNSENLSKKDQEGVRVIHQCGSHLLMLINDILDLSKIEARKLELVNSSIDLPDFLRGVTEICGIRAKQKGIDFEIKISDRLPMSINGDEKRLRQILINLLGNAIKFTDSGCVTFRVDILAIAGENTESPQATIRFQVEDTGVGMKPEQLESIFLPFEQVGSTGHKAEGTGLGLTISQRIAKLMGSEIKVQSNLGEGSVFWFEITFPALFSRDRNCADNFSPHTNQDKIIGIKGGNIPRILVVDDDINQCLMLTNLLTDIGCQVESAHDGKQGLELASQTQPHMILLDIAMPNMDGFEFMVHLQANPQTSNIPIIVSSANVFAENRQQSLEAGAAAFIPKPLQKDELLTALASLLNIDWDVQSNPVSPPPATTNQVELVLPSPDILQEIYHLAMMGDTTGIEDILEKQIEINQQLIPFVTKLTQMTSNFQTAKIRKYIKSLLTSEVV
>NZ_AP018254.1|WP_096624430.1|4950724_4952026_-|hybrid-sensor-histidine-kinase/response-regulator
MNSDSPHQPIHILLVDDNPNNLKVLSEAIQGYGWKALMACDGESAIEQAEYAHPDLIILDVMMPGIDGFETCRRLKVSKITQDIPVIFMTALSDTIDKVKGLEIGAVDYITKPFQQEEVIARLKLHLKLSHLTRTLEQQVQKRTAELTESLQQLQQAQLRMIQNEKMSALGNLVAGIAHEMNNPLGFISATLKQAKPNIHDILEHLQLYQETVPNPSPKIIKHAEAIELDFCVEDLMKMIDSMTMACDRIKNISNSLRTFSRADRDYKQPFNLHEGIDSTILILKHRLKANDKRPAIEVFTEYGDIPELECFPGQLNQVFMNILANAIDALEEANLNRSYEDIVTNPNHIKITTFTAEKQVKIIIADNGIGMEESVKARVFDHLFTTKAVNKGTGIGLAIAKQIIVDTHHGQIDCDSTPGQGTKFTITLPFSV
>NZ_AP018254.1|WP_096624428.1|4949085_4950717_+|cyclic-peptide-export-ABC-transporter
MNLIWLLLRASWLQVVVAILMGLISGGTTARLIAFINSAIAGNDNSDLGWLFPLLTVIILVSSLCSQVLLINLSQNAVFELRLQLSRGILNAPLRHLENLGPSRLLATLTDDVATLSNTVYAIPFICVDIAVISGCLFYMLWLSGVVFAFTIGVILIGVGSIQFLINHAQLFLARARDEQDNLFTHFRAITDGIKELKLNSLRRQEFFRDELTHTAAKSRDNNKSALLTFAISTGWGNLLFFVLVGVLLFVLPQLVDIPISILSAFILTLTYIMLPMQSILDKLQALGKASVALQKIETIGLKLADQKEVSSFISQPMIQNWNRLELEQVTHKYNGQGKDKDNMFTLGPVSLTFVPGEIVFIVGGNGSGKSTLAKLITGLYIPETGRIKLNKKVINDDNREWYRQHFAVVFSDFYLFDKLYGIENPFANIQAREYLRQLQLEKKVQIENSRLSTTDLSQGQRKRLALLTAYLENRPIYLFDEWASDQDPIFREIFYKQIIFNLKQRGKTVLVISHDDHYFPVADRIIKLDYGIVEYDKRNNGI
>NZ_AP018254.1|WP_096624426.1|4948431_4949067_+|class-I-SAM-dependent-methyltransferase
MERVNLWRSPEHALNYLTRADTLPHRQEGEGVILDLIPKDGKRILDLGTGNGRLVSLLRVDRPQTEFIGVDFSPTMLETATQRFAEYGNVEIIAHNLDEPLPELGKFAAVVSSFAIHHLSDRRKRELYGEVFEILEAGGIFCNLEHVSSPTPALHEYFRRCVGLEEEPDDPSNQLLDVQTQLDWLREIGFGDVDCYWKWLEFALLVGRKPN
>NZ_AP018254.1|WP_096624424.1|4947308_4947920_-|methylmalonic-aciduria-and-homocystinuria-type-D-protein
MNYFRVSTFERDYYLNLVGDYGQAVQISIHYPTAYIAANRERIFPDWKNQSTLWMIVVLQQSLYPLNKSTPAIELEKQRLRKSFMKFGLELAFTLEDVTPPTLKPQKYRTDIIDPRTGYPLLSRPGETPHDDTATVKALLNYPIIYNRCRLLVHPHWGTAVYPGIMISTAPPQEIMAVIPDVARVCGWYEMVDFQTLISQRMF
>NZ_AP018254.1|WP_096624422.1|4946882_4947086_+|hypothetical-protein
MSDNFPFQNPDQLKQWHQGIENANRNNIFCHCRTCGYEWMDSKFDVPCPQCISKDVESISSWQFPDD
>NZ_AP018254.1|WP_157780793.1|4945766_4946369_-|ATP-binding-protein
MITVDESDIKLFGKFVETSPLHEQLAIVICPYAIPFSQRWGNNGLSADFIGEYASRIFNDSPLTIGNNMLIKDVQNSVAFIANELLENAMKYSHYSYKYPIKLRLNIDGSTIRLLITNTVTQIAAQKLQDYIHQLESMDTMEMYIHQLEYGEIEEKNSSKLGILTIINDYSGQLGWKFCKLFSEVSPIVEITTMVELKFL
>NZ_AP018254.1|WP_096626447.1|4945024_4945600_-|ATP-binding-protein
MEIFGHYVDQPLRDEHLTLGFSPSRIPMKRRWRNNGLSADFIADYLTTFFPLMEDDPMGKKRHAEIKNVVSYVANELLENAMKYCNLHAQYPITLHLQLENDLVRIFVDNSITPTNAEIFKAYVKNFIASDPMELYIQQLERNAEDDSCNASGLGFLTMVNDYNAKIGWKFRNVQGNSQIVAVTTMVEVVI
>NZ_AP018254.1|WP_096624418.1|4944651_4944996_-|STAS-domain-containing-protein
MEIKGDNYTVWIDNHNNTINFTGSLRLGGMEEYAPILNLLNSAANNNPESVILDLQNLNFLNSSGISMLSKFVIEMRKRKAENLKIIGSNLIPWQGKSLKNLQRLMPSLVLELQ
>NZ_AP018254.1|WP_096624416.1|4944169_4944484_+|microviridin/marinostatin-family-tricyclic-proteinase-inhibitor
MSEQNHQHPQPPTPFFARYLEAQLQDLSEAEIEAISGGGMAVTLAYPSDQEGVEGGVVTQKYPSDHEDVSDGTITTKKYPSDQEDSGFNIPFPNFPGFNLFSGS
>NZ_AP018254.1|WP_096624436.1|4956749_4959332_-|CHAT-domain-containing-protein
MAFRTKPMRIKQHYWLYLGLCLVSLCFVLTVIPAVAVISIPSVAISQENNAQVASKSTNFLDEGRNFYTLGRYQEALKAWENAAKHYQFQGDRVHQALSLSYLSLVQQELNQWEAAKVSIEQSVKILQTMKPSADGIIWAQILNTHANLQLRMGQGERAIATWQQAQKYYEQAGDTTGSLGSQINQAQALQSLGYYRRSRQQLEELTKKMATMPDSEVKVSGLRSLGLALHAIGDSQSRQVLEQSLATANKIAAKTQLSSILTSLGKIAADWQDPEAAFNYFEDAEAAANNPQEALQARLERFKLLVDYGKLEYAIPLAPQLKQQLSQIAPSRSSLFAAINFAATLNKLAQPDQVLPSRDLAELMAVTVKSAQQLQDTVAEAHALYQWGQVYSRTSQWSEAKKLVEQSLNLARKLQADDIIAQSASGLGRIYQQQNSQQEAVAAYTEAVKSLKALHSDLAAINPDVQFSFRESVEPVYRQLVALLLDEQPTQSEIVQARELIESLQVAELDNFFREACIDKVQQIDQVDPSATVIYPIILRDRLATIISQPGKPLRYYQISKSQSEIEQTLDNLLASLNPVSNSQTRQNLTQQVYDWLIRPPEADGVFQDAKTLVFVLDGKLRNIPIAALWDGQQYLIEKYAVALSPGLQLMSANPLQQSKIQAIVGGISESRSGFAALPAVKSEVKQISQTIPATLLLNQQFTSQALGDRIQSSNADVVHLATHGQFSSRLEDTFLLTWDGRVSVKELSELLQNRGGNRSKAIELLVLSACNTATEDDRAVLGLAGLAVKSGARSTVATLWPVKDRAAEILMNRFYQQLRQPNTTKAEALRQAQIRLIRQTDFRDPFFWSAFVLVGNWI
>NZ_AP018254.1|WP_157780794.1|4959353_4959530_+|hypothetical-protein
MLILPNKSSKISIEEWRKITSLVFGDNTTFGYLPQLRSHITRMQTLTYISHKGVISLE
>NZ_AP018254.1|WP_096624438.1|4959682_4960282_-|hypothetical-protein
MSYSEFTLAKAKQDFGLTTLEKRDIFASIPELAASNLLTETLSYNLAIAFGSNSEKARSEFIIAPILVDLRRQLHERISLFSGVDFTVDESKGLNGTCDFIITQSPEILIVTAPVITVVEAKKENINAGLGQCAAEMVAAQIYNQQAAIEIQTIYGVVTTGSIWQFLKLEGQLLTIDLSEYYLKDVNQILGILASALQT
>NZ_AP018254.1|WP_157780795.1|4960329_4961247_-|S-layer-family-protein
MGDNELFISNISSTIGSPNPSIGQINPNQALGSSGNVTIRTPILQVSDRAGVSVGNYGRVGAAGTLTIDADVIKLNRSQITASATSGEGGNINLNLQKFVILRNQSKISTEAGGVGNGGDITIVSPVIVGLENSDITANAVRGNGGNIQITTQGIFGPKYRDQITNESDITASSEFGVSGTVDINNFGVDPSSGLVELPVNTTDPSQQIATGCVDTNGNSFIATGRGGIPQNPSQSMINYRTWSDIRDISAYRQNQPITAQIPQSTEKLVQATGWRRTPQGTIELVADNSPTQVQQLLACAEIYR
>NZ_AP018254.1|WP_096624442.1|4961477_4962656_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MLVLEAKLKGKESQYGLLDEAIRTALFLRNKALRHWMDNKDVSKNDLQKLCAVLAKEFDFAGKLNSMARQASADRAWCAIKRFYDNCKAKKPGKKGYPRFKKRGHSVEYKTSGWAISADKKYITFTDGFKAGKFQLVGTRDFSFYSTKQIQRVRVVKRADGYYCQFCVDAERKEQHQHNGKQVGIDVGLEFFYTDSDGKTVENPRFLRKSEKSLKRKQRKVSRCKKGSSNRRKAVKKLAKKHLKVSRQRKDFAVKTARTLVQSNDLVVYEDLQVRNMVKNHHLAKSISDASWSLFTDWVDYYGKVFDTWVIAVAPHYTSQDCSVCGTRVQKSLSTRTHKCHCCGTVMHRDHNAATMILNKGLKSTVGRTESKACGQNDLCLSGETPLSKSAE
>NZ_AP018254.1|WP_096624444.1|4962744_4963140_+|IS200/IS605-family-transposase
MLENYRHKTTSVTMINYHFVWISKRRKKVLVGNVAIRLEELLYEKTKELECEILALEIMEDHVHLFVSSPPTLAPDQIMFRLKGYTSRVLRQEFPHLLRMPSMWTRSYFCGTAGDASSEIIKKYIANQKTR
>NZ_AP018254.1|WP_096626449.1|4963349_4963601_-|hypothetical-protein
MEPNENNFRRSADQEFIESLHQLENILHETDNQPEQKLETQPTPDTTKDPENQGDSSEIDLAAWEDAVADIEQYLEQQAQAES
>NZ_AP018254.1|WP_096624446.1|4963685_4965023_-|S-layer-homology-domain-containing-protein
MFYSKRPAIILCLVSFLSACANSPNAKNLEQLLAADPRLQTNPPTFGRNTTTPSPTPTSGVEEVNKQLPKDFPTNLPIYPGATLQEVITGDGSPSTTIRWQTSDPSNAIVSFYQRELKANNWEITTAPNDDGEGVFTVKRDNQQAKISIQPQPVTNPTPNQPQTTTEIKIEYTPTGTPLASTTPENNNQTTGTGDFISPLVPQPSPTATANVAINNTPQQFTDISTIPQPTQGYIQDLARLGVIPVRDSQNKTNQSSTFQPSKIITRSEYAHWLVLANNALHANRPDKQIRLADTGKQPVFKDVPQTHPDFPFIQGLAEAGLIPSPLSGDTSAVLFRPDAPLVRETLLQWKVPLDHRQALPSANLNAIQQTWGFQDATRIDPKVLSAVLADYQSGEKSNIRRVFGYTTILQPKQSVTRAEAAIALWYFGTQTEGISAREASKLRD
>NZ_AP018254.1|WP_157780796.1|4965166_4965316_-|hypothetical-protein
MASRKRLLRDRTLREANYVMTQWRYFCISPSIKTFSAILLPALIGCCSG
>NZ_AP018254.1|WP_096624448.1|4965518_4965701_-|twin-arginine-translocase-TatA/TatE-family-subunit
MFGLGWTEVAVIGLVALLVFGPKKIPELGTALGKTLRGFKEELNKPDEDENEQNPQNDEL

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Crispr_ID: NZ_AP018254_45

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_45

5348984-5349056

Orphan

Consensus_repeat	Method
GTGGGTCATTTTCGGTGGGTCGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_45

>merge|NZ_AP018254|45|5348984-5349056|CRISPRCasFinder
GTGGGTCGTCTTCAGTGGGTCATTTTCGGTGGGTCGTCTTCAGTTTTCAGAGGGTCATCTTCAGTGGGTCATT

>NZ_AP018254|45|43|5348984-5349056|CRISPRCasFinder
GTGGGTCGTCTTCAGTGGGTCATT	TTCGGTGGGTCGTCTTCAGTTTTCA
GAGGGTCATCTTCAGTGGGTCATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096624891.1\|5346974_5348318_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|273332
NZ_AP018254.1\|WP_096624901.1\|5359135_5359489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096624883.1\|5340547_5341477_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_AP018254.1\|WP_096624879.1\|5337051_5338239_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_AP018254.1\|WP_096624887.1\|5344289_5345984_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_AP018254.1\|WP_096624895.1\|5353125_5354382_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_AP018254.1\|WP_096624881.1\|5338881_5340378_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_AP018254.1\|WP_096624903.1\|5359597_5360494_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|130314
NZ_AP018254.1\|WP_096624909.1\|5362149_5363070_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_AP018254.1\|WP_096626508.1\|5349173_5352878_+\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|215643
NZ_AP018254.1\|WP_172892809.1\|5334883_5335024_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626510.1\|5354504_5355098_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096624877.1\|5335176_5336676_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989
NZ_AP018254.1\|WP_096624889.1\|5346188_5346809_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP018254.1\|WP_096624885.1\|5342221_5342452_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096626506.1\|5342719_5344126_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP018254.1\|WP_096624905.1\|5360808_5361828_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_AP018254.1\|WP_096624899.1\|5358412_5358871_-\|YbjN-domain-containing-protein	unknown	unknown	gnl\|CDD\|341119
NZ_AP018254.1\|WP_096624897.1\|5355704_5358326_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NZ_AP018254.1\|WP_096624911.1\|5363070_5363382_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096624891.1\|5346974_5348318_-\|amino-acid-permease	gnl\|CDD\|273332	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.05672e-50
NZ_AP018254.1\|WP_096624883.1\|5340547_5341477_+\|DMT-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	9.34358e-08
NZ_AP018254.1\|WP_096624879.1\|5337051_5338239_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.87749e-76
NZ_AP018254.1\|WP_096624887.1\|5344289_5345984_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	9.88524e-135
NZ_AP018254.1\|WP_096624895.1\|5353125_5354382_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	4.79449e-162
NZ_AP018254.1\|WP_096624881.1\|5338881_5340378_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_AP018254.1\|WP_096624903.1\|5359597_5360494_-\|ABC-transporter-permease	gnl\|CDD\|130314	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein. This model describes daunorubicin resistance ABC transporter, membrane associated protein in bacteria and archaea. The protein associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	1.64799e-25
NZ_AP018254.1\|WP_096624909.1\|5362149_5363070_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	1.05279e-142
NZ_AP018254.1\|WP_096626508.1\|5349173_5352878_+\|magnesium-chelatase-subunit-H	gnl\|CDD\|215643	PLN03241, PLN03241, magnesium chelatase subunit H; Provisional.	0
NZ_AP018254.1\|WP_096626506.1\|5342719_5344126_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.22738e-79
NZ_AP018254.1\|WP_096624877.1\|5335176_5336676_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	3.37055e-105
NZ_AP018254.1\|WP_096624889.1\|5346188_5346809_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.60921e-16
NZ_AP018254.1\|WP_096624899.1\|5358412_5358871_-\|YbjN-domain-containing-protein	gnl\|CDD\|341119	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins. This family includes protein T110839 from Synechococcus elongatus that is structurally similar to type III secretion system (T3SS) chaperones (T3SC) that bind effector proteins, and is homologous to YbjN, a putative sensory transduction regulator protein found in Proteobacteria.	1.97267e-35
NZ_AP018254.1\|WP_096624905.1\|5360808_5361828_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.2786e-105
NZ_AP018254.1\|WP_096624897.1\|5355704_5358326_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0

>NZ_AP018254.1|WP_096624891.1|5346974_5348318_-|amino-acid-permease
MTSKTTITSPRDSQIKPTLSTIDAGALIVGMVVGVGIFETPALVAANTANSQIAIMAWILGGIVSLLGALCYAELATTYPHAGGTYYYLQRAFGPRLAFLFAWSRMTVIQTGSIALLTFVFGDYASQVWRLGEYSSAIYASMAIALLTVVNILGIYQGKLTQNLLTLAKILGILLVIGVGLFIATTPAAPVTSNPNQTTTFGLAMVFVLLTYGGWNEAAYLSAEVRNAQKNMVSVLLGSILAITLIYLLMNWAYLHGLGLAGMANTQAPAAELMRRGFGETGAKFVSFLIAVSAFGAANATVFTGARSNYALGQDFQIFAWLGRWSRNQTPTNALIVQGIIAILLVGFGAFTRNGFKAMVDYTAPVFWLFFLLSGIALFVLRDREPRQVRPFRVPLYPIIPLLFCATCAYLLYSSVNYTGMGGSLGLGILIAGIPILFLEQQGNLNP
>NZ_AP018254.1|WP_096624889.1|5346188_5346809_-|class-I-SAM-dependent-methyltransferase
MFRIALATIASLMLASCAEQVSSVPNNETPSNTVNVQQTTPAEAPTRTPDVVFVPTPPEVVDKMLEMANVGKDDVLYDLGSGDGRIPIAAAQKFGTRGVGIDIDPERVREAKENAKKAGVEDKVTFLQQDLFKSDFREATVVTLYLLPELNVKLRPQLFEQLKPGTRIVSHAFDMGDWKPEKTATVNGRTVYFWTIPEKVPANLSK
>NZ_AP018254.1|WP_096624887.1|5344289_5345984_+|NAD(P)/FAD-dependent-oxidoreductase
MQTYDVIIIGAGHNGLVCAAYLLKAGYSVLLLEKRPVPGGAATTEECLPETAPGFKFNLCAIDHEFIHLGPVVQELELEKYGLEYLPCDPVVFCPHPDGKYFLGHKSLEKTCGEIARYSPRDAAKYAEYTEYWLKIINALTPMFNAPPKSIIDIAGNYNFSKIKDLVSTLGSVNKTMDFVRNMLSSAEDILNEWFDSEFLKAPLARLAAEMGVPPSQKNLGIGAMMMAMRHNPGMARPRGGTGALVQALVNLVKSKGGDIFTDKHVEKVLIDNGKAVGVRVQGGQEYRGRCGVISNIDAQRLFLQMLDKTDVDAVDPALWERLERRIVNNNETILKIDLALDEPLRFVHHQHQDAYLIGSILIADSVAHVEEAHAKCMMGEIPDSNPSVYMALPSALDPSLAPPGKHTLWIEFFAPYQIKGTEGTGLKGTGWTENLKHQVADKVIDKIAEYAPNLKNTIIARRVESPAELGERLGAYKGNYYHIDMTLEQMVFFRPLPELANYKTPFEGLFLTGAGTHPGGSISGMPGRNCARVFLQTQQPMAQSLKDAREALLSMVSSVLKSR
>NZ_AP018254.1|WP_096626506.1|5342719_5344126_+|cytochrome-P450
MHLPQEIPIPPVIQTLQLITNPTRFLDRCASMAGDIFTTRVMGWNSPPIVFLSSPDAIAQVFAIPAGKLDFQTPTYVFRPLFGDNSLVLQPTYEHSRQRNLLLPSFHGEKIRAYGEIICQITQEAISTWPLGREVKMQSMMPDITLQIILQVVFGISPGENYQKLRRLLTSLLHDITTPWYSSLFFFPSLQKDWGKFSPWGNYLYRKKQIDDLIYQEIRQRRQQLNSTANFQRKSEKQDILSLLLSARDSAGKSLNNTELKDQLISLLLLGYETTSGVLCWLFHLVHSHPQVKTKLLQELNSLNPIPTPEEITQLPYLDVVCKETMRLHPIALICTPRIVKEPVQIDKYQFSPSTVLIPCIYLAHRRSHAYNSPTKYIPERFLERKFSSFEYLPFGGGYRGCIGSAFSMYELKLIFATIMLNYQLELLHRKTVYPQRRGITIVPSGGVPMRIKSKSSSVSVSTISQKV
>NZ_AP018254.1|WP_096624885.1|5342221_5342452_+|hypothetical-protein
MKKECGHTIQILNGYSTNDANFRIDLTLMDRDTASSDDKVGVFKYNLNLDNLKGKTWSREWRSGDGEGSKLYITVK
>NZ_AP018254.1|WP_096624883.1|5340547_5341477_+|DMT-family-transporter
MSNFVGEIAALSAAGLWAVASVLYGRVGEVIPPLLLNLFKGIIAIAFLILTIFLVGDSLPSLPLLSLTLILLSGVIGIGVGDTIFFAAINSLGARRTLLLGTLAPPLTAIFGLLFLDEQLQIQAWWGIFLTIIGVAWVITERTTDQLLRGYSQLLRGTAWGLLAAITNSIGAILSRAAFKMTTASPLWVALLRLSAGEVTLILLITVFSRGKSFADFRKFTNLKIVIATIVAAFCGTYLGIWLQQTAIKLTPTGIAQTLLQTSPIFILPLAVFTGEKISGRAIAGVLVAIAGIALLFYLNQPPNVIPYT
>NZ_AP018254.1|WP_096624881.1|5338881_5340378_+|lysine--tRNA-ligase
MSEEDIRATRLEKVEQIKQLGANPYAYRWEITHTAAQLQEMFVDLESGAEADLQVAIAGRIMARRFMGKLAFCTLQDESGKIQLYLEKQTIEEAMPEIPNFFKSLDKLTDAGDIVGVKGTIKRTQKGELSIHVHEFAILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRRRAQITAGIRRYLDERGFLEIETPVLQAEAGGADARPFITYHNTLEMELYLRIATELHLKRLIVGGFEKVFELGRIFRNEGISTRHNPEFTSIEVYQAYADYNDMMDLTEGIITTVTQETLGTLKITYQEQPVDLTPPWRRVTMHDVVKEATGLDFTEFTDLEVAKTACKNAGIPGVDECTSIGKLLNLAFEEKVESTLIQPTFVLDYPVEISPLAKPHRSKPGLVERFELFIVGRETANSFSELTDPIDQRQRLEAQALRKAAGDLEAQGVDEDFLTALEHGMPPTGGLGIGIDRLVMLLTDSPSIRDVIAFPLLKPET
>NZ_AP018254.1|WP_096624879.1|5337051_5338239_-|WD40-repeat-domain-containing-protein
MLNSDDNFWLILVEKIIPKKLFYPTNIFQRAMFLESRKTNNISIVSKATNSQLEAVAKQILKDNKENLVSVHSAATVAFPTSNEREVPRYADAQQPPIRKPARLKSHIWRCVQTLPGNSPAVAISPNGELLASGSIQIKLWDLQTGNWVDTISGNTGILKALAFTPDGKQLISAGLSQTIRVWNLQSGKQVRAFTPHAYAVNSVAIHPQGKVFASSDRGKGIQLWQQDCESAIASWLTHQDWVCSVKFSSDGHLLASGSYDKTIKVWDVEEGTEIATSPEFSSRLNQIAWSGDNSVIACAGADGTLGLWFLLTGEIKTISADSDEIYTVAFHPQGNLVVTAGSDRTVKFWSIHTGQEIVRLTGHENTVKNITFSRDGETLVSADNDGVIKVWQQA
>NZ_AP018254.1|WP_096624877.1|5335176_5336676_-|DEAD/DEAH-box-helicase-family-protein
MPRTPTLTFDRGTLLLHPPPRGRGWMDFATWDDRVEKFRIPAIQYRPLVEKMQAENIDFVDQAKGFFPLELTPGMVMEAYPHQTEALTAWKLAGRQGVVVLPTGAGKTYLAQLAIESTPRTSLIVVPTLDLMHQWYAHLKAAFPDTEVGLLGGGARDKTPILIATYDSAAIHAETLGNMYALVIFDECHHLPTDFYRVIAEYAIAPYRLGLSATPERSDGKHADLSILIGKEVYRKRAEDLAGKALAEHKVVQIKVQLSQQERQRYNELMQTRNNFLRDTGISLGSLDGWQRFVQMSARSQTGRRAMLAHRQAKEIAIGTDGKIRILANILTQHYPERVLIFTADNATVYRISLEFLIPAITHQTPVKERHEILTKFRNGEYLTVVASHVLNEGVDVPAASIAVILSGTSSAREYTQRLGRILRKNSDGNKQAILYEVIAENTSEEGTSARRRLQTDKPETKTKSPRGNLQVVYGQPSETSVPRAAEQMNLWDDYSTKK
>NZ_AP018254.1|WP_172892809.1|5334883_5335024_-|hypothetical-protein
MSDLNRGIMKFDGADSPKLVMISSIILLGSIAALILWALQTAYAVG
>NZ_AP018254.1|WP_096626508.1|5349173_5352878_+|magnesium-chelatase-subunit-H
MKRIVLIAGFESFNADLYRQAAKIAVERCRELDIRVFSDRDLTTQPEIVESALQGADGFFGSLLFDYDQVMWLRDRISNIPIRLVFESALELMAMTRLGAFVIGDKPKGMPKPVKFILDKFSNGREEDKLAGYISFLKVGPKLLKYIPVGKVQDLRNWLIIYGYWNAGGSENVAALFWVLAEKYLGLQVGTIPPVIETPNIGLLHPEYQGYFESPPDYLQWYKSHHKINLPLPTVAILLYRKHVITKQKYIYQLIRRFEQAGLIPIPIFINGVEAHVAVRDLLTTNYELQQRQQGNLEIKSLSPQAICVDAIVSTIGFPLVGGPAGSMEAGRQIEVAKSILSAKNVPYFVAAPLLIQDIYSWTRQGIGGLQSVVLYALPELDGAIDTVPLGGLVGEDIYLIPERVDRLINRVKNWINLRQKPPAQRKIAIILYGFPPGYGAVGTAALLNVPRSLIKLLTALKEQGYTVGDFPNDGEELIRLVKEADEAIKNEAEVFDPQNHKELIANNITTVNVHTLEKWLGYLQTTRIEKQWKSLTSSGIKTYGDELQIGGINLGNIWIGVQPPLGIQGDPMRLMFERDMTPHPQYAAYYKWLQNEFQADAIIHLGMHGTVEWLPGSPLGNTGYSWSDILLGNIPNLYIYAANNPSESILAKRRGYGVLISHNVPPYGRAGLYKELVNLRDLIAEYREDPEKNYLLKPAICQKIVDTGLDADCEFTEAKKLGIAFTPENIKLFSNHAFNDYLLKVYSYLQVLENRLFSSGLHILGEPPTPEEMQSYLDAYFATQNPEPTEVETIQNLLNQNTDEITNLLRGLNGEYIPPAPGGDLLRDGTGVLPTGRNIHALDPYRMPSPAAYARGREIAQKIIAQHLQDNGTYPETVAVMLWGLDAIKTKGESLGILLELVGAEPVKEGTGRIVRYELKPLTEVGHPRIDVLANLSGIFRDSFVNIIELLDDLFQRAAELDEPESENFIRKHALALKAQGIANPTARLFSNPAGDFGSLVNDQVVDGNWESGEELANTWQSRNSFSFGRQDKGQARPEVLNTLLQTTNQIVQEIDSVEYGLTDIQEYYGNTGGLKIAAEKTSGKKVTASFVESFSKDTTPRKLDDLLRMEYRTKLLNPKWAEAMANQGSGGAYEISQRMTALIGWGGTANFTDNWVYDQATETYALDREMADKLRQANPEAFRNIIGRMLEAHGRGFWNASEEKLQKLRELYDLTDEELEGVNPRENTGYRV
>NZ_AP018254.1|WP_096624895.1|5353125_5354382_-|molybdopterin-molybdotransferase-MoeA
MLNVTTAAQIILDLIQPLDPHQDGESIDLNHARGRILAVPVISNLDFPHWDNSAMDGYAVRYQDVQGCDEQHPAILEIIETIPAGSQPQKTLEAGNAARIFTGAMMPIGADTVVMQEVCQATGDRVYVKSAPQLGQFVRKQAAYYQAGNTLLSPGIMINPAELAVLAAAQCTQVQVYRRPQVAIFSTGDELVEPDQSLQPGQLVDSNRYALLAGLQQLGVEVEVLGIVPDQPEALRKTMEKAVTSADMVISSGGVSVGDYDYVAEVMTALGGKIQMEAVAIKPGKPLTVAEFVGKLGNSSRSCLYFGLPGNPVSALVTFWRFVQPAIKKLSGLSGGWNPNFVKAISMSVLRSNGQRESYLWGNLYLSGGKYEFRLAPGGDSSGNLINLAGTNGLAMIPVGTREVAVGEDVLVLMLSWI
>NZ_AP018254.1|WP_096626510.1|5354504_5355098_-|hypothetical-protein
MRCIFAIGFATAIFAGVGTTSVQAQRRNPAPKTNPEEAAKYRWRVFTPPDGSFSVLMPGEPQATSQTQRTFMGEINLQLFIAQPPRQEVAYIVAYNDFPDSYGKMADPQQVLQNAQEMALKTTQSRLVSQRTIQSNNGHPGREIEYVNQGGKITRNRLYFAHGRLYQVMVITTPRQQRFLTKSIPGYLNSFQIVLQR
>NZ_AP018254.1|WP_096624897.1|5355704_5358326_+|DNA-mismatch-repair-protein-MutS
MTAAYSSSQTGVSSATSSITDHRAVDVSKLSQMYQHYVEVKEQYPHAVLFYRVGDFFECYFEDAVTLAQELELVLTSKQAGEQGRVAMSGVPHHAWERHATELVQKGFAVVICDQVEDASEAAGRLVRREVTRIITPGTLLEDGMLKASRNNYLAAVVITNEHWGLAYADISTGEFLTCQGSNLEHLAQELMRLQPAEVLFPVNAPDLGTLLRPGESSPHLPECLPRSFCYCLRSQIPFSQGEARSRLLAKFRLKSLEGLGCANLPLAVRAAGGLLEYLEDTQKEGSIPLQPLKTYTLTDFLIVDNQTRRNLEIMQTVRDGTYHGSLLWALDRTNTAMGGRALRRWLLQPLLDIKGIRARQDTIAELVANTGLRQDLRSLLRQIYDLERLTGRAGSGTANARDLYALAESLGKLPDLAQLVAAAKSPFLKALQQVHPELEALGAKIRAHIVESPPIHIKEGGIIREGVNPILDERKSLVKEDQEWVANLEVTERDRTGIPNLKVGFNKTFGYYISLPRSKADQAPDNYIRKQTLTNEERYITPELKEREARILSARDDLNKLEYEIFVELRDEVGHHAETIRNVSRAVAAADVLCGFAELAVMQGYCRPEMVDGREIHIVDGRHPVVEQSLPAGFFVPNSTYLGSNIDNNGQLTLDFAPNNGHGEPQINPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSFVPATSARLGICDRIFTRVGAVDDLATGQSTFMVEMNETANILNHATNRSLILLDEIGRGTATFDGLSIAWAVAEHLAMEIKGRTIFATHYHELNELAGIIPNVANYQVTVKELPDQIIFLHQVQPGGAQKSYGIEAGRLAGLPPRVIQRAKQVMSQIEQHSKIAVGLQNLE
>NZ_AP018254.1|WP_096624899.1|5358412_5358871_-|YbjN-domain-containing-protein
MASYQADLEQFGIENSGINHVEVIENVIDSLEQDDSAMVSHPEGGGYLWKFKYGTVEVFVQLTGTTDEDTLTVWSTVLKLPVSDELGLMRKLLSMNCSTTLEARFGIIDNQVVVLGKRTLTDISAGDVSRLITIVATIADNHDELLQEEFGK
>NZ_AP018254.1|WP_096624901.1|5359135_5359489_-|hypothetical-protein
MRTPTSLLTKIALVSAGLSVAIIATPQTTLAQQSINLQNYESPNPKDPFSQGVEQNNFSMFQLLHNATLGNLNENFQPGESITDAVSAFRARQAEAFRLRQNGNLHNGAPNNSTSEK
>NZ_AP018254.1|WP_096624903.1|5359597_5360494_-|ABC-transporter-permease
MKMTVLRSKPEINWEQVASPQLYADAPSSWVSEIVQETLALTRRLFIQLQRRPSTLLAGIVQPVMWLVLFGALFQNAPKGIFGETSNYGQFLSAGVIVFTAFGGALNAGLPVMFDREFGFLNRLLVAPLASRFSIVFASAIFIISQSLLQAAVIVAAAALLGAGLPDVVGLGAIALIVFLLALGVTALSLGLAFALPGHIELIAVIFVTNLPLLFASTALAPLTFMPTWLQVIATLNPLSYAIEPIRYLYTHQTWGLNSVVMHAFWGDVTFGSALLVLFGFAFIALLVIQPRLRRTLS
>NZ_AP018254.1|WP_096624905.1|5360808_5361828_-|ABC-transporter-ATP-binding-protein
MAPAVSIQNLKKRYGAVEAVKDVSFQVEPGEIFGLLGPNGAGKTTTLRALCTLTTPDAGKIEVSGVSVLENPRAARKRLGYVAQEVALDKILTGRELLQLQAALYHLPASVTKERINTVLDLLDLQEYADQKTGTYSGGLRKRLDLAAGLLHAPDVLVLDEPTVGLDIESRFIVWEFLRKLREAGTTVVITSHYLEEIDALADRVAIIDRGVVIAQGTPSQLKDQVGGDRITLRIREFSPDSEAAQAKELLEKLPFVKEVIINNAQGNSLNLVVANENNAIATIQNALNTAGLPMFGIAQSRPSLDDVYLAATGRTLMDAELAAVSSRDIKAEKKASMK
>NZ_AP018254.1|WP_096624909.1|5362149_5363070_+|TIGR01777-family-protein
MKVAITGATGFVGSNLVKRLCEQGTQVFVLTRNAVKAEKVFPASAFPNVEIVAAPSANQAEWGRVLSQCDGVVNLAGEPIGEGRWTPTRKQEILNSRKLTTANLVSAIAQANPKPQVLVNASAIGFYGTSETATFDETSASGNDFLAEVCRAWEAEAEKVKDAGVRLVILRLGIVLGDGGALAKMVTPFKLFAGGPIGSGKQWFSWIHIDDVVSLIIQALNDNNMAGVYNATAPQPVRMHELCQNLGKVLHRPSWLPVPSLAIEALLGDGAVVVLEGQQVLPKRTQESGFNFKFENIQPALKDILG
>NZ_AP018254.1|WP_096624911.1|5363070_5363382_-|hypothetical-protein
MKEKFLNLLNLILVADVFLVFLGFAWFAIAAIGKASGINLGFDLWHQLWQPVFNPAIGILMAGALVSGGLSWLNRKFAQKAETNRQVISTPMGNAEERIPENN

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Crispr_ID: NZ_AP018254_46

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_46

5518585-5518697

Orphan

Consensus_repeat	Method
CATCAATCGCTTGCAAAATCAGTTTTTTCTTTGTGACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_46

>merge|NZ_AP018254|46|5518585-5518697|CRISPRCasFinder
CATCAATCGCTTGCAAAATCAGTTTTTTCTTTGTGACTTCGCTAACTACAGTGCATCCTGGATACTTCTTGATGCATCAATCGCTTGCAAAATCAGTTTTTTCTCTGTGACTT

>NZ_AP018254|46|44|5518585-5518697|CRISPRCasFinder
CATCAATCGCTTGCAAAATCAGTTTTTTCTTTGTGACTT	CGCTAACTACAGTGCATCCTGGATACTTCTTGATG
CATCAATCGCTTGCAAAATCAGTTTTTTCTCTGTGACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096625144.1\|5525914_5526820_-\|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225762
NZ_AP018254.1\|WP_096625140.1\|5522159_5523443_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|381147
NZ_AP018254.1\|WP_096625118.1\|5513086_5513419_+\|response-regulator	unknown	unknown	gnl\|CDD\|381085
NZ_AP018254.1\|WP_096625136.1\|5520503_5520947_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625124.1\|5515436_5515925_+\|phycocyanin-subunit-alpha	unknown	unknown	gnl\|CDD\|271303
NZ_AP018254.1\|WP_157780816.1\|5511866_5513021_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225113
NZ_AP018254.1\|WP_096625122.1\|5514795_5515314_+\|phycocyanin-subunit-beta	unknown	unknown	gnl\|CDD\|271301
NZ_AP018254.1\|WP_096625134.1\|5519741_5520494_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_AP018254.1\|WP_096625128.1\|5517175_5518045_+\|phycobilisome-linker-polypeptide	unknown	unknown	gnl\|CDD\|366093
NZ_AP018254.1\|WP_096625148.1\|5528403_5529702_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625132.1\|5518813_5519638_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_AP018254.1\|WP_096625138.1\|5521008_5521845_+\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	unknown	unknown	gnl\|CDD\|274729
NZ_AP018254.1\|WP_096625130.1\|5518173_5518398_+\|phycobilisome-linker-polypeptide	unknown	unknown	gnl\|CDD\|366605
NZ_AP018254.1\|WP_096625146.1\|5527131_5527557_-\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|226278
NZ_AP018254.1\|WP_096625120.1\|5513464_5514091_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP018254.1\|WP_096625142.1\|5523728_5525918_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_AP018254.1\|WP_096625114.1\|5509876_5510728_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225136
NZ_AP018254.1\|WP_096625126.1\|5516193_5517009_+\|phycobilisome-rod-core-linker-polypeptide	unknown	unknown	gnl\|CDD\|366093
NZ_AP018254.1\|WP_096625150.1\|5530126_5530723_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625112.1\|5507340_5509128_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096625140.1\|5522159_5523443_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.90763e-61
NZ_AP018254.1\|WP_096625118.1\|5513086_5513419_+\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	5.94423e-06
NZ_AP018254.1\|WP_096625124.1\|5515436_5515925_+\|phycocyanin-subunit-alpha	gnl\|CDD\|271303	cd14770, PC-PEC_alpha, Alpha subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	3.53918e-108
NZ_AP018254.1\|WP_157780816.1\|5511866_5513021_+\|GAF-domain-containing-protein	gnl\|CDD\|225113	COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms].	1.63685e-10
NZ_AP018254.1\|WP_096625122.1\|5514795_5515314_+\|phycocyanin-subunit-beta	gnl\|CDD\|271301	cd14768, PC_PEC_beta, Beta subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	1.35302e-107
NZ_AP018254.1\|WP_096625134.1\|5519741_5520494_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.45696e-08
NZ_AP018254.1\|WP_096625128.1\|5517175_5518045_+\|phycobilisome-linker-polypeptide	gnl\|CDD\|366093	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide.	1.29662e-73
NZ_AP018254.1\|WP_096625132.1\|5518813_5519638_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	2.18335e-27
NZ_AP018254.1\|WP_096625138.1\|5521008_5521845_+\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	1.98158e-105
NZ_AP018254.1\|WP_096625130.1\|5518173_5518398_+\|phycobilisome-linker-polypeptide	gnl\|CDD\|366605	pfam01383, CpcD, CpcD/allophycocyanin linker domain.	4.8025e-20
NZ_AP018254.1\|WP_096625146.1\|5527131_5527557_-\|DUF1311-domain-containing-protein	gnl\|CDD\|226278	COG3755, COG3755, Uncharacterized protein conserved in bacteria [Function unknown].	1.39096e-19
NZ_AP018254.1\|WP_096625120.1\|5513464_5514091_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	7.95925e-09
NZ_AP018254.1\|WP_096625142.1\|5523728_5525918_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	2.56575e-81
NZ_AP018254.1\|WP_096625114.1\|5509876_5510728_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	4.04051e-35
NZ_AP018254.1\|WP_096625126.1\|5516193_5517009_+\|phycobilisome-rod-core-linker-polypeptide	gnl\|CDD\|366093	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide.	9.94903e-71
NZ_AP018254.1\|WP_096625144.1\|5525914_5526820_-\|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|225762	COG3221, PhnD, ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism].	2.74724e-66

>NZ_AP018254.1|WP_096625130.1|5518173_5518398_+|phycobilisome-linker-polypeptide
MLGTKLFRYEVAGLKQSDETDNLGYQIRSSANTIITVPYNRMNSEMRRITRMGGKIVSIQPVSAAESTENHDNN
>NZ_AP018254.1|WP_096625128.1|5517175_5518045_+|phycobilisome-linker-polypeptide
MAITTAASRLGTEAFDQTAPLEMRPRTTKEEVELIISAVYRQLLGNDYLMKAERLTSAESLLRDGKITVRDFVRQVAKSELYKKKFFYNCFQTRTIELNYKHLLGRAPYDESEIIFHLDLYQNAGFEADIDSYIDSPEYEANFGENIVPYYRGFQTQTGQKTVGFSRMFQLYRGYANSDRAQLKGSVPHLVNELGRNDASAVVSPSGTQSGFAYVAPTKGVTPATGFGGGATFGKEGRLYRVETAGVFGAGYPKTRRVNQAVVIPYEELSGYMQRVQRQGGKIASITPV
>NZ_AP018254.1|WP_096625126.1|5516193_5517009_+|phycobilisome-rod-core-linker-polypeptide
MTGLGAAAQLGIRAFAESGIVELRSNAVREDVENVIRSAYRQVLGNAYLLEGQRLTSAESLLHSGEITVRDFIRMIAQSELYRERFFYSNSQTRFIELNYKHLLGRAPQDETEIAYHVDLYSSQGYSADIDSYIDSVEYQENFGDNIVPYYRGFSSQVGQKNIGFSRMFQLYRGYANSDTSQGQKQGKLTWEVAKNLASPIRPASSGALVGGAVGARGDVYRIRYMQAASPNAAVVRRSTNEIVVSFEQLSSKLQQLNRKGCRVMSIGLAS
>NZ_AP018254.1|WP_096625124.1|5515436_5515925_+|phycocyanin-subunit-alpha
MKTPLTEAVAAADSQGRFLSSTEVQVAFGRFRQATASLEAAKALTAKAQSLAEGAANAVYQKFPYTTQMTGPNFASTSTGKAKCVRDIGYYLRMVTYCLVVGGTGPLDDYLIAGIAEINKTFDLSPSWYVEALKYIKANHGLSGDPAVEANSYIDYAINALS
>NZ_AP018254.1|WP_096625122.1|5514795_5515314_+|phycocyanin-subunit-beta
MLDAFAKVVSQADARGEYLSTAQLDALMNMVKDGNKRMDTVNRITSNASAIVANAARALFAEQPQLIAPGGNAYTSRRMAACLRDMEIILRYVTYAIFAGDASVLDDRCLNGLRETYLALGTPGASVAVGVQKMKEAAIAIANDRNGITQGDCSALMSEVASYFDRAAAAVA
>NZ_AP018254.1|WP_096625120.1|5513464_5514091_+|CHAT-domain-containing-protein
MNRVKQLLLNRHGLGFPIKILFLGANPINTTQLRIGSEVRDIYEILRRGSVRENFSVETYTSVRPGDISQGILDFKPAIIHFSGHGTENGEILLENESGEIQPLSATNFAGYFARIQPQIPIHCLILNACHSAPLAQALATHLPYVIGMDIAISDAAAMKFAVGFYKALANHASIPEAYHQGCGEIQLYNLAEELTPKLYQKIGSNRH
>NZ_AP018254.1|WP_096625118.1|5513086_5513419_+|response-regulator
MDELKVILVEDNKNWQHILQEKLRQAFKQIGHSQDRVYLVDNFADAYNQLSQNHWDLLVTDVALGDSTEESMRFGIQLIELARDRQIPAIAISGSIKVTTQDVRNILVQY
>NZ_AP018254.1|WP_157780816.1|5511866_5513021_+|GAF-domain-containing-protein
MDYRQYGVDLELEKQRLGERVLRKNEHHVKRYPVSPQFVEEGQQNLESLTIAAYPYDFEEMQGLILIECVGKSALIRKQNGWLELYLQRAAHAIWYATTYARQNVQTSQLTNLHGFTESLTQLSDPKELFSQIAWETLHILAADVVVIYEYDRTTQEFITPPDIAGRLIYVEQMKSEVSSNNVPQKLIDYGVNTYSHDLATDPVFQKSDFSQREQIKSAAGILLKIQDEIVGVIFINYRREFYFSDSVRTLIETLASSIAIAIKNQRWLGNWVEALNDIDLKIITANQQEELLHQIVERAASATNANFAAIRLVNKVNQTLETCAIYPPSCPRTSGKYLSSFDEGITGWVAKNRMPQRVDDVSKDSRYRAFFPNVGKVFLVYLI
>NZ_AP018254.1|WP_096625114.1|5509876_5510728_-|methyltransferase-domain-containing-protein
MPTSVNTTTYKQQIIKDFNSRTNYDNGRFHVSVGQRLVELVNLQPGQSILDMATGTGNVTIAAAKIVGAQGRVIGVDMSVGMLQTAREKLFKLGLTNVEFIEADVEEISEEQQQNYWTENSFDMVFCSLAVAYLADIPKFLRQCHRLLKPGGTLAFNAWEEKAFPPSIIFREVAASYGVEIPNPNELLGSPQKCYAHVYQSGFQDIKIICEDFGWYFTPTLEYAEGMWQINSQNAFGYQVNFLSEVKIQECKSKYIEAIQGIETSANQAWCNALLNFVIARKI
>NZ_AP018254.1|WP_096625112.1|5507340_5509128_-|hypothetical-protein
MSQLPHEQAEDENTPTEILSQLAHESIELAIIVAKNPSATPELLRELSFINNIKIRENLVKNPNTPKDILFELAGEFPQEFIANPILDLLLLENPQLPLDISYWTLRKLLTLKEVPSWLLTGAAVHPNSEIVYFVARHPQTSIEILHQIIPRSHDDVRIGICISQRGDVTLEILEVLAKDSPIPVKLHLAKQDNTPPSVLTILADSTDKNWNVCLELHVSVAKHPHTPIAVLSQLLASGEFKIKRAIAMRENLPKPLFVALAMDYRIYAMNILPQNHSISATLLTELSTHPELHIRQIVAAHPNTPTPILEQAVNEQALHDFLAQNPKVPIPVLEQILIDASTKIKNAIAQNPVTPSHLLDQLAQTHDHDLLILIARHHHTDNSTLERILQRLAFDTRLSVHKFVAKHPHTPVDILRNWAEKHPQLRPWIAQNPNLPPDILANLAKDPSYLVRCEVAKNHNTDPKVLTDLAQDPEPEIRQAIAKNPHAPPAALNLLVLDWYCVSLVARHPNTPAQALAHLARLGGYEWLVVRHLNTSPVIRTQILNQLARSYNVSDRLYAAQNPHTHSATLEELAKDHDIKVSQAALHNLQNRSE
>NZ_AP018254.1|WP_096625132.1|5518813_5519638_+|HEAT-repeat-domain-containing-protein
MDANFEQNQDNETLTIEQVIANLRGNDLGLRFYAAWWLGRFRVQNPEAVRELIIALEDTDDRTPEGGYPLRRNAARALGKIGDLSAVEGLIQALECADFYVREAAAESLGMLGDSSAIPALGNLLSCGVEGEGLIQPQPDNTHPYDAIIEALGSLQAIDLIPQIELFLQHPTPRVQYAAARAMYQLTNEGKYGDILVRALGVDDLQLRRAALTDLGAIGYLPAAEAISQTLAENSLKLIALKGLLEHQVKKVSPPTPTLTEDVIRVITLMDSLL
>NZ_AP018254.1|WP_096625134.1|5519741_5520494_+|HEAT-repeat-domain-containing-protein
MNNSQLCQTLVKAVEEADSSKTLLEAVQNLADASLEESVPTLIAALGYNNPGAAVAAVDGLVKIGKPAVTPLLELIDNYNYGARAWAVRALAGIGDPRGLETLLDAAKNDFALSVRRAAARGLGIIKWQELPLEEAKIAQQRAYEVLTVVCQDPEWVVRYAGVVGLERLAIAIFKVQGELVVKITSDLEKVMAEDEEVSLRTRAELALQTLRIESNQLNQNASRLRLNSQQSTKQEKEEDYAQRGEGRRN
>NZ_AP018254.1|WP_096625136.1|5520503_5520947_+|hypothetical-protein
MQIHDLKVGDKIGVFFYDDWRGRKATIETVTHISSTGTITVSSGTRYTYQGREVGALGDATYLCSVSKAEEIIARDGTKYQESPVVDELEIRENRLIKLSQLAADNAIRILHQYGYYKDKKDKSGKLAEVESKIAAIVQEYLEEMEK
>NZ_AP018254.1|WP_096625138.1|5521008_5521845_+|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase
MVYNFNFSSSLVNQIENPCMLFLHGFMGNREEFSPVIRFLKTDFCCVSIDLPGHGKNILLDTELENEKPYSMSQVAEGIIDFLDSLNICKCLLVGYSMGGRLGLYLGINYPHRFSHLILESASPGLATIEEREARIKNDLGIARKLNRCLQANDFQQFLINWYQQPIFGQISHHPDFPQMLQQRLQCHPLELAKSLQYMGIGVQPSLWDKLANLQLPVLLIVGEQDRKFVEINQKMCSFNPKFSLQIIKNCGHNIHWEQPQQFAEIIRDFFVNSSCLM
>NZ_AP018254.1|WP_096625140.1|5522159_5523443_-|hybrid-sensor-histidine-kinase/response-regulator
MTTEVPAQENTILVVDDTPTNLQVLFDLLSAHGYRVAIAKNGETALQRLETSQPSLILLDVMMPGIDGFETCQRIKANPNTCDIPVFFMTALSDPVDKVKGFSLGAVDYITKPIQNEEVLARIQVHLQLRSANRIMEQRTQELQQALVNLQKAQLQLVQGEKMSALGQLVAGIAHEINNPVNFIHANITHVREYVQNLLDFLCLYQHHYPQPIAEIQERAAEIDVKFLQQDLLKILKSMEIGSDRIRDLVLSLRNFSRLDEAECKQVDIHEGIENTLLILQHRLKAKPHFPAIQIIRDYGQLPAIECYPGQLNQVFMNIFSNAIDALEEAKIDSPTITIRTSMVSGWVTISIIDNGVGIPENIRDQLFNPFFTTKPVGKGTGLGLSISYQIITEKHGGKIDCYSTFGKGTEFIVQIPISQRTSLFPH
>NZ_AP018254.1|WP_096625142.1|5523728_5525918_-|response-regulator
MKIATKFIGLSLGLVGAIALISGVSTLWRNQIQHSSHQKYSQALRRMQATTLVQNRLYAEILELKDHVLFRNIDEEKEEEFDQGIEGALDLLESLVSTPEVKYIRERQKLFEELEENVIEGINRGLIKTEADIKADFRAINGFKRDIDFFLTDLTEEAQQQAAAAETELQQANAIATNVSYATIVLLIVMVSGLFWLVLHPIIQSLKQLQAGANQVGTGNLSHRIAIYTQDEIEELSQAFNQMAESLQQKLKELEIARTAAEAANRAKSQFLANMNHELRTPLNGILGYVQILEREPTTTEKHIKGFRVIHQCASHLLTLINDILDLSKLEAQKMELYPQDFHFANFLASTADICRIKAEQKGVEFKFQPGANLPTAVHADDKRLRQVLLNLLSNAVKFTDVGCVSFRIEVVDDTSLDSERMLRIRFQVKDSGIGIAEEKLASIFLPFEQAGKRERNMEGTGLGLAISQQIIQKMGGEIHVESVLGQGSCFWFELDLPLASEWITTEAIADQIVVGYQGERRKILVVDDREENRLVTMNMLEPLGFEVAEAENGQQGLDIAQKIRPDLIITDVHMAVMDGLEMTRQLRQMVDFAQTPIIASPATLSQVDMQDSVDAGCSSFFPKPLDFNGLLAEIKRLLNLEWIWAENPNVEITEDDNSTQTAEIVFPPPEELAALYTAAQGGFMSEVQQEANRLKQLAPKYIPLANKILELSQQFDDEGILQLLEPWV
>NZ_AP018254.1|WP_096625144.1|5525914_5526820_-|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein
MRSLILFPYLIAGVIPFWLGACSPAPPQSTQKSTPSSPETVLRISVQPTQDRVEQERMIAPLEAHLEQVLGQQVDFILAQDYQESVDMVVDGRANAVYAGVVSYFEAVERGAKVKPLVAPIDADTVRPWYRSCFVVTANSSIKTLRNLKGKRVGFVDPSSTSGYLVPLAALQREGINPEQDFSQVVFGGTHEGTGELLATHQVDAIATNLATYNQLREEGKGKNLRIIWESDPIPHAPILVSQNLPPDLIQKLKKAFLTAPEGIKDLMGAKTIGYTLVEDEDYESIEELRRQVNLSGGSSQ
>NZ_AP018254.1|WP_096625146.1|5527131_5527557_-|DUF1311-domain-containing-protein
MQQNVNWRISSIISASAIVTICILFNLLMGKQLEVIAQQTNCANPGSNVEWKLCTAKAYQAADRRLNQVYKRLYNQVNGDERKELIKAQQNWIKFRDTNCLFEVYSSRRGSGYSGFLNNCLERMTKERTTQLERYIQERSF
>NZ_AP018254.1|WP_096625148.1|5528403_5529702_+|hypothetical-protein
MSQQLNTNYLFNCPEWLAISVICVTGIITIPGENADAAVSPDFDLSGRESQITEQLPVQQIDIATKIKQHRLQAEAISQRLQTNTNSHPNHDLRDLSEVQAPKLTTELEKPDLTELTKSRTTALITKLKRVSIPEMDPVTKGENPSPGTTDDVITKLKTSRQQKQIIAQSDSSGVVGDTFGEINKLRQQLLIDPIDPVIVRGKPPVASPSSSAGTPTAYGVGSRQAYIGGGVSFPLDGKRDRTDGSLSFGFGEGDPVNSLGIEFNFNITSIGDANDFDFGDSGTIGFKLHRFIGRGTAVAFGWSNPIRWGDTDRTRPTLYGVVTTSIPLQPDNPNHQLPLTVSVGVGSGAFRSKGAFADGQDTPNVFGSVGLQVIPQASLVGSWTGNRLNLGVSVVPIKNIPLVINAIYTDVTDNLNFGSGLSIIAGSGFRF
>NZ_AP018254.1|WP_096625150.1|5530126_5530723_+|hypothetical-protein
MRHKFIFQVGFGLVSISSLLNFAPVSLAGDTIIRGAAIDSSFAPVNPGIATPNPGIVFQGDNIIVTDQVQSGLNKSINEIFNSNQNQDSTVIALIRGDNITFAKQQVIDAFTKVGVDVNLTTELSARLEALFNSQSVDINQLNAAIKIYNQIVSQTGDSNLIALSELAEFKKVAEVLKKLRRTVNCSTRVQSNECISL

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Crispr_ID: NZ_AP018254_47

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_47

5628611-5629006

TypeI-D

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CRT

5 spacers

cas2,cas1,cas4,cas6,csc1gr5,csc2gr7,cas10d

The CRISPR arrays of NZ_AP018254_47

>merge|NZ_AP018254|47|5628611-5629006|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGTTGTCAAATTTCCTGCTGTTCCTTACATCTCGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCCCAATCTGGCGTATGCACAGGCGGTGGCAGACGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTGAAGCAAATGATAGCAGATAGCTGAGGGAATATGAGCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACACACAGAGCATGGCAGGCTCTTGAAGGCGTGACTCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGATGTGCTACATCTGTACGGCTTGCCGGATTCTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACA

>NZ_AP018254|47|11|5628611-5628935|PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTTGTCAAATTTCCTGCTGTTCCTTACATCTCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCCAATCTGGCGTATGCACAGGCGGTGGCAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TGAAGCAAATGATAGCAGATAGCTGAGGGAATATGAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACACAGAGCATGGCAGGCTCTTGAAGGCGTGACTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|47|45|5628611-5629006|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTTGTCAAATTTCCTGCTGTTCCTTACATCTCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCCAATCTGGCGTATGCACAGGCGGTGGCAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TGAAGCAAATGATAGCAGATAGCTGAGGGAATATGAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACACAGAGCATGGCAGGCTCTTGAAGGCGTGACTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GATGTGCTACATCTGTACGGCTTGCCGGATTCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACA

>NZ_AP018254|47|8|5628611-5629005|CRT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTTGTCAAATTTCCTGCTGTTCCTTACATCTCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCCAATCTGGCGTATGCACAGGCGGTGGCAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TGAAGCAAATGATAGCAGATAGCTGAGGGAATATGAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACACAGAGCATGGCAGGCTCTTGAAGGCGTGACTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GATGTGCTACATCTGTACGGCTTGCCGGATTCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780819.1\|5624284_5624440_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625302.1\|5636449_5637475_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
NZ_AP018254.1\|WP_096625308.1\|5641278_5641554_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_AP018254.1\|WP_096625298.1\|5634034_5634883_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018254.1\|WP_096625290.1\|5626982_5627678_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_AP018254.1\|WP_096625284.1\|5621095_5622751_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_AP018254.1\|WP_096625288.1\|5625584_5626919_+\|ATPase	unknown	unknown	gnl\|CDD\|273349
NZ_AP018254.1\|WP_096625306.1\|5640923_5641298_-\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|375906
NZ_AP018254.1\|WP_096625278.1\|5618820_5619240_-\|plastocyanin	unknown	unknown	gnl\|CDD\|235060
NZ_AP018254.1\|WP_096626540.1\|5627860_5628409_-\|phycobiliprotein-lyase	unknown	unknown	gnl\|CDD\|381208
NZ_AP018254.1\|WP_096625304.1\|5637552_5640918_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	cas10d	cd09712_cas10d_CAS-I-D	gnl\|CDD\|274469
NZ_AP018254.1\|WP_157780820.1\|5641546_5641717_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376177
NZ_AP018254.1\|WP_096625296.1\|5633220_5633862_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP018254.1\|WP_096625294.1\|5632021_5633026_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|274976
NZ_AP018254.1\|WP_096626538.1\|5623126_5624263_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_AP018254.1\|WP_096625282.1\|5620357_5621032_+\|alpha-ketoglutarate-dependent-dioxygenase-AlkB	unknown	unknown	gnl\|CDD\|225687
NZ_AP018254.1\|WP_096625300.1\|5635730_5636444_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|187842
NZ_AP018254.1\|WP_096625292.1\|5631323_5631596_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP018254.1\|WP_096625280.1\|5619603_5620095_-\|cytochrome-c-550	unknown	unknown	gnl\|CDD\|184185
NZ_AP018254.1\|WP_096625286.1\|5624583_5625426_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|215135

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096625302.1\|5636449_5637475_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	6.96021e-175
NZ_AP018254.1\|WP_096625308.1\|5641278_5641554_-\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	1.25356e-24
NZ_AP018254.1\|WP_096625298.1\|5634034_5634883_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	3.83529e-52
NZ_AP018254.1\|WP_096625290.1\|5626982_5627678_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	1.327e-67
NZ_AP018254.1\|WP_096625284.1\|5621095_5622751_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_AP018254.1\|WP_096625288.1\|5625584_5626919_+\|ATPase	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	1.0398e-102
NZ_AP018254.1\|WP_096625306.1\|5640923_5641298_-\|DUF5615-family-PIN-like-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	4.7907e-23
NZ_AP018254.1\|WP_096625278.1\|5618820_5619240_-\|plastocyanin	gnl\|CDD\|235060	PRK02710, PRK02710, plastocyanin; Provisional.	1.90463e-63
NZ_AP018254.1\|WP_096626540.1\|5627860_5628409_-\|phycobiliprotein-lyase	gnl\|CDD\|381208	cd19433, lipocalin_CpcS-CpeS, CpcS/CpeS phycobiliprotein lyase family. Phycobilin lyases covalently attach a chromophore to the Cys residue(s) of cyanobacterial phycobiliproteins. They include Synechococcus sp. PCC 7002 phycocyanobilin lyase CpcS which attaches a phycocyanobilin chromophore to C-phycocyanain beta subunit and to allophycocyanin alpha and beta subunits, Synechococcus sp. PCC 7002 phycocyanobilin lyase subunit CpcU which forms a heterodimer with CpcS-I to attach phycocyanobilin to beta-phycocyanin and to allophycocyanin subunits, and Prochlorococcus marinus phycoerythrobilin lyase CpeS which attaches 3Z-phycoerythrobilin to phycoerythrin. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development.	6.80026e-38
NZ_AP018254.1\|WP_096625304.1\|5637552_5640918_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	gnl\|CDD\|274469	TIGR03174, cas_Csc3, CRISPR type I-D/CYANO-associated protein Csc3/Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc3 for CRISPR/Cas Subtype Cyano protein 3, as it is often the third gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	0
NZ_AP018254.1\|WP_157780820.1\|5641546_5641717_-\|hypothetical-protein	gnl\|CDD\|376177	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated. An alpha+beta fold domain associated with restriction enzymes across prokaryotes and fused to JAB deubiquitinases, and chromatin proteins in a wide range of eukaryotes. The domain is predicted to function as a modified-DNA reader domain.	0.00222027
NZ_AP018254.1\|WP_096625296.1\|5633220_5633862_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.20807e-53
NZ_AP018254.1\|WP_096625294.1\|5632021_5633026_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	4.31618e-144
NZ_AP018254.1\|WP_096626538.1\|5623126_5624263_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	3.69081e-76
NZ_AP018254.1\|WP_096625282.1\|5620357_5621032_+\|alpha-ketoglutarate-dependent-dioxygenase-AlkB	gnl\|CDD\|225687	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair].	8.7545e-36
NZ_AP018254.1\|WP_096625300.1\|5635730_5636444_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	gnl\|CDD\|187842	cd09711, Csc1_I-D, CRISPR/Cas system-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog; also known as CasA/Cse1 family.	5.40886e-85
NZ_AP018254.1\|WP_096625292.1\|5631323_5631596_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.92396e-37
NZ_AP018254.1\|WP_096625280.1\|5619603_5620095_-\|cytochrome-c-550	gnl\|CDD\|184185	PRK13618, psbV, cytochrome c-550; Provisional.	2.86907e-108
NZ_AP018254.1\|WP_096625286.1\|5624583_5625426_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	1.5197e-133

>NZ_AP018254.1|WP_096626540.1|5627860_5628409_-|phycobiliprotein-lyase
MSIQEFQAFFDCCVGKWSTERTYHYLTKREVERSHTDFVVEPITDTAKLQVLQDNQFPIPTNLEILPGYHLEFETVSETGEKVSQQLNMLFVTEGNGKIITGQYLRDRAYEEDRPIVADFQFDISKCELLMTTKYTRVVAVDSITLINPNLRIRKIITYCRPEDNQPLQEVVLVGFGVEQKA
>NZ_AP018254.1|WP_096625290.1|5626982_5627678_+|TrkA-family-potassium-uptake-protein
MDLSSLGFFRSLRKDNHQFAVIGLGRFGRSVCSTLHRLGYQVLATDIDEKRVADALSEKIVGHAVQLDSTEPAALKEAGLFEFDTVIIAIGNYIQESIITTLNVKEGGVPHVIAKASTEVHCKLLKRVGADHVVFPEYEAGSSLARTLTKPSILERFDLDPEHSIVEIIVPDEFDGKTVAELQLRNRYGLNLLAVSQDGKFKINPDPYQRLYKGAAMVVIGCNKDINRLPI
>NZ_AP018254.1|WP_096625288.1|5625584_5626919_+|ATPase
MTVSRTICFGFLAVILLGTVLLMMPFSTTTGTWNDLIVALFTSTSAVCVTGLSIVDVSTHFSFWGELWIMLLAQIGGLGYMTTTTFLILLTGRKFDLRQKIAIQQALDRPGMSGSRQIIRSIIATTLIFELTGVFLLMTTFVPEFGWREGLWLAIFHSVSAWNNAGFGLFSDSLVKYQTSPLVIFTISMLIICGGIGYQVLIETYMWLRDRILQRQAKLIFSLDFKVATSTTLILLVLGTVAFFGVETRNPSTFGGYSIADKFLLAWFQSVTTRTAGFNSVDIGKMTTAGLFITIALMFIGASPGGTGGGIKTTTLRVLTSCTKSILQGKEEVLLYERKIPLQLILKAVGVLVGSIAAVLSVTILIALTDPKLPFIQILFETVSAFATVGLSTGITASVSTAGKLILIVTMYMGRVGVLLLMSAILGDPQPTRIHYPEENLRVG
>NZ_AP018254.1|WP_096625286.1|5624583_5625426_-|methyltransferase-domain-containing-protein
MNTSLNNRIQNFYDASSGLWEQIWGEHMHHGYYGADGLTKKERRQAQIDLIEELLHWSNPNPVTNLLDVGCGIGGSSLYLAQRYHARATGITLSTVQAQRAQERASEQGLSARTNFLVADALNMPFEDNSFDLVWTLESGEHMPDKVKFLQECYRVLQPGGTLIMATWCHRPTDQSPLNQNEQKLLADIYRVYCLPYVISLPEYTEIATKLPLKDLKIADWSAAVAPFWNVVIDSAFTPQALFGLLRAGWTTIQGALALGLMRQGYESGLIRFGLVCGRK
>NZ_AP018254.1|WP_157780819.1|5624284_5624440_-|hypothetical-protein
MYLCDQQFEKMGLNAIAIFLVSAFQVRDCSPIAIVIKMRSQYPKFKYGDRP
>NZ_AP018254.1|WP_096626538.1|5623126_5624263_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MDIYSSLKALGIAEPSGFGWLAVVFTFLLAWIVTWRFIPVVRKFALRVGWADQPNARRLNREPLPNAGGLAIYAGVIAALVLASLLRPIEIQSVLAQVLTILLGGSILVLVGFIDDQFGLPSSIRLLVQVFTALLLVANKISIQVTIGTPFDPTLSTLLTVLWVVGITNAINLMDGMDGLVGGIGFITSMSLLAVSAQSFNRAAATLVLAALAGAALGFLRHNFHPSRIIMGDAGAYFFGYVLAATTILGKLQASTVFALFPSVLFVLLPVLDTTQVIIRRLMAGKNPLNTPGKDHIHHRLLAWGLSQRRAALTLWLIALGSNILAMWLQNMSWFQISATTTGIVILLAFTVWQRVRAARIPPSPPDMMVSSAVKDEG
>NZ_AP018254.1|WP_096625284.1|5621095_5622751_-|chaperonin-GroEL
MAKIVAFDDESRQALERGINALADAVKITLGPKGRNVLLEKKFGAPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDTAGDGTTTATVLAQAMIREGLRNVTAGSNPIALKRGIDKTVEALVEEIAKVAKPVEGSAIAQVATVSAGNDEEVGAMIAEAMERVTKDGVITVEESKSLSTELEVVEGMQLDRGYISPYFITNNERMTVEFENPRILITDKKISNIQELVPVLEKVARSGQPLLIIAEDIEGDALATLVVNKARGVLNVCAIKAPGFGERRKAMLQDIAVLTKGQMISEEIGLSLDTATLEMLGTARKVEIDKESTTIVAAGDNAADVQARIAQIRKQLAETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLAKKVAEFKQTLTNEDEVVGADILARSLEAPLCQMANNAGAEGAVIVSRVRDTEFNIGYNAITGQMEDMIASGIVDPAKVVRSALQNAASIAGMVLTTEAIVVEKPEKKAPAPDMGGMGGMGGMGGMGMGMM
>NZ_AP018254.1|WP_096625282.1|5620357_5621032_+|alpha-ketoglutarate-dependent-dioxygenase-AlkB
MSKTVINCNKLPLPEIIKLPNGEPTPQAEILLYKDFFSGVNAQSIYQELLNNIKWRQDPIKLYGKEMLQPRLTAWYGEPGVVYTYSGITMYPQPWTDTLLQVKQQVEMAVNINNTEEDKQIEFNSVLLNRYRHGQDSMGWHSDDEPELGANPLIASVSFGETRRFLLRHRHDKHLPKLEIPLNHGSLLIMAGQTQHYWQHHIPKTAKPIGERINLTFRVIRTNP
>NZ_AP018254.1|WP_096625280.1|5619603_5620095_-|cytochrome-c-550
MLRRIIGVFVATVVLTFQFAIASANAVELDAKIRTVPLNEKGDTLTLSLKQVKEGKQLFQYACAQCHAGGVTKTNQNVGLDPETLALATPPRNNIENLVDYMKNPTTYDGEEEISELHPSLKSADIFTEMRNLKEEDLVAIAGHILMQPKVVGEKWGGGKIYY
>NZ_AP018254.1|WP_096625278.1|5618820_5619240_-|plastocyanin
MKAIAEQIRRIGLLVVTLVLVAGTLAIFAPTAAAETYTVKLGSDKGMLAFEPAKISIKPGDTIKWENNKLPPHNIVFDSVKNPAKSADLAKALSHKQLMMNPGQALETTFPADAPAGEYTFYCEPHRGAGMVGKVIVEG
>NZ_AP018254.1|WP_096625292.1|5631323_5631596_-|CRISPR-associated-endonuclease-Cas2
MFVVVSYDIPQDKRRTKIHRILKSYGQWMQYSVFECDLTDTQYAKLRSRLSKLIKPDEDSVRFYFLCACCQGKVERIGGEMPRDNSIFLV
>NZ_AP018254.1|WP_096625294.1|5632021_5633026_-|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTLYVTQEDAFIAKVDERLNVKYDKKTILDVPLIKIDGLVVMGRVSISPMAISELINHKIPLTFLTANGKYIARLEPEMSKNVYLRNAQWKAAGESFQALHVVKGFVRGKLKNYRYALAKTQRSYSDVDLCENLTTLGNAIASLETAATIDSVRGYEGVGSAAYFACFNQLLRNENFCFTNRNRRPPVDPVNSLLSLGYSLLRHDIQGALNIVGFDPYLGYLHVERYGRPSLALDLMEEFRPLIVDAVVISAINRKIFKPSDFVTEPVSNAVSLTKEALHTFLRLYQEKKLTKFKHPVLGIQKTYQESFEIQARLLGKYLMGEIDKYPPLVMK
>NZ_AP018254.1|WP_096625296.1|5633220_5633862_-|CRISPR-associated-protein-Cas4
MNNQKETLSSVICNSAVSTDDYISIAALNQYSYCPHRCWRMHCLGDFMDNQYTIEGTSLHERVHTIGDSNREEVWQVRAIWLKSDKYKLIGKSDLIELENGEWYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGKSIGVGYVYYAQTHQRQLIEINQELRQQTITAIAEVTKLLKTGMMPRAVYSQRCKGCSLEPQCLPKVGEKIRKYCETD
>NZ_AP018254.1|WP_096625298.1|5634034_5634883_-|CRISPR-associated-endoribonuclease-Cas6
MPHSLILNLIPKSPIYPNYLTGRHYHALFLNLISSVDRNLGDKLHDSTADKAFTLSPLQVQTNHRYQHKNSQYSKLLQVEQPQPIPPGTPCWWRISLLDDTLFGKLTPLWLNINPEQPWRLGSADLFITSILATPQSTQPWANSCSYGQLYQQASDSERVISLSFATPTAFRQGKYDTTLPTRESVFNSLLSRWNKYSGIEFTKVNLESVFPSFINIHTEIVADSRSKFIGIVGEVSYRIMGDIEAMEIKRINALADFAIFAGVGRKTTMGMGMVRRVNNNS
>NZ_AP018254.1|WP_096625300.1|5635730_5636444_-|type-I-D-CRISPR-associated-protein-Cas5/Csc1
MSFIYHCQIELHDSMYHATREIGRLYETEPIIHNYALCYALGLIDSDKYATNVPEEDSYRYFCPEQVPKYEQHLTPLNQQGIYVTPAASIHHTSVLNTWKYANNNYHVEMEKTQKNIPSFGRAKEIAPESQFEFFIISQKDIKDLLPKWIRLGKWMSKAEVMVNKLAEAPVTEGLFTCKHPLNPLDVMFTNQVFSYDVVNMPPVSLIQNVQMRGQYYQIKEMKEMKIPARMAYYFRS
>NZ_AP018254.1|WP_096625302.1|5636449_5637475_-|type-I-D-CRISPR-associated-protein-Cas7/Csc2
MNFLKTVDAKFFHNEIPAKPMGKYAHFVTIRITESYPLFQTDGELNKVKVRAGIQHAEAISRLAMFKRKQSTPERLTGRELLRNYKIGDWEKCDYNVDFSKTTPDCILYGFAIGDAGSEKSKVVVDTAFSITPFDDSHLNFTLNAPYENGTMSRNGEVTSRINSQDHILPQVFFPSIVTLKDPTEAGFLYIFNNILRTRHYGAQTTRTGRVRNELMGVIFADGEIVSNLRWTQKIYDLLSFDGKINPPDPLNEDDVRKAAIKAINELMTQEYVTHTDYIGENFTPLLDEVKLITSNEAKLQELLTQANLESSAYAQKYISKNSEAKNSEKGKKGKKAAAME
>NZ_AP018254.1|WP_096625304.1|5637552_5640918_-|type-I-D-CRISPR-associated-protein-Cas10d/Csc3
MNNLEDNLENLDDELPEEVPDYDFTKEEDDDEFLLKKELLTIRLFIEAVKKSKGNQDDATLEKFAKYVLPHIILQLAGATAKGGKFFDVTIPKINAKRASEGKPPVDSTRNAGDQSIIAHLLNGLFPTYRIIKELQKSSVTNPVKRNLGELQVCIFIVAYLLHDYEKFPDYIAWLIENNVADRDWELEPPQKADAPNLGRDYIAKKIQDFGLHHLLGENWRDFIDDIIEISSNSGVKHDSDLGLATRGLKTLDDDRLDSRIRQDLIDLVSLSDLFASVVKHPRDVETGRLPNLISRLSNHQLKLTYHSLCENRGVLTNILNNAIIEAHPEEFYTPLLYLPDGVVYLASQDATEINTDDIPERVVNKVKYLCGEKLRERQTGFNRDGKGFKFADYYWLFFDVIGLMKVSIDAACRLLPDGKTASSGKRGESLQSYQTQGELSTNLNLQFPSEIRIDRLAEFGDILCRGIWGSWCERVKQAQKDIPKAKRKIPPELDLTQKLAEYLGLSDEIPAIKQIQSLKKTGGVPLDWYYLAAQYFRKHPGKDFAQILEVMRGMVSYAEGIIQPILQEFQDIPDGWKDLKIYVQRVIFLPTQAVVTPEIDPFLEELRRYQAAKVTGRGRENVCAMSSSAYTVTEQMESATLFAPQVYSNRQILFNAQAAKRQICSIWSIEIMLRQILMNQTNAVGADFEGRKYRYLYLYPTYFFTPETNKFLQLAYNQFARTRFDAELRKHFITEKQIAKFDITNYQQVDTLLIKESLKPEDDKTFKISFPEQETLTFFFLGLPPGRDATDTESWVTPAWLALTLPLVMDVKVVASESPVPPFISGADFAETVLLDGEHQAIRSLVKKDIYRLDSILPRNSEKREFSPLNALTAAYCIHLEVNRKKDGDPDWGKLSDLARDLETSPLYVFHYLTKWLRKPKKDKDNQQKTMDSVPIAKIRLYMDLYKYFEPGEETVNKLRKLTELYRRFYRAKSSYAKANAILKPIDEAADVILKIDKAVVPDTESLTDVVAARLAKLMNNVRRRTAEGKPTLTFVDGKWKPALTSEQERQAVYDFAQYFVEEIFKESFKSDRARLAGTQLNLIRDTCEYLYRLTDDEERKNLPQTEPEDIPDLGVDDAA
>NZ_AP018254.1|WP_096625306.1|5640923_5641298_-|DUF5615-family-PIN-like-protein
MKLKLDENIDLRVLSLLRLAGHDVATIPGQALNSASDEEVIEVCRSKGRCLITCDRGFGNRLKYNPENYPGIVIIRLPSRFTFTNWREAIEILINALETADVTGKLWVIQTGQVQEFQAIEPEG
>NZ_AP018254.1|WP_096625308.1|5641278_5641554_-|DUF433-domain-containing-protein
MIRNDLLSRISIDPNICFGKPCIRGHRIWVSLILDYLASGTTIEEVLEAYPSIEREDVLACIAYGAEMARGVFVELPLDKKKKRAHEIKVR
>NZ_AP018254.1|WP_157780820.1|5641546_5641717_-|hypothetical-protein
MKDGYVRKIEEFDKPSPLAAKVNGGAANGWEYIEVKKNDQWIRLEELRQIWRNTND

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Crispr_ID: NZ_AP018254_48

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_48

5629116-5631051

TypeI-D

I-D,II-B

Consensus_repeat	Method
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CRT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	PILER-CR

26 spacers

cas2,cas1,cas4,cas6,csc1gr5,csc2gr7,cas10d

The CRISPR arrays of NZ_AP018254_48

>merge|NZ_AP018254|48|5629116-5631051|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCTGCAGCTAGCTGGTTTTCCTCTTCTGCAGCGTTCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCAAGGCTTCCAGAGGTGTCCCGGTACGAAATCTACCGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAGTGTCAATGGCTTTGGGTTCGGTGTGTACCTAACGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTAAGCTCCGCGCGATCAATATCCGCGCCAATCAGTAGGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCTTCTTGATTCCGCCAAAGCGTTTGGTGCGCTGTGGTTTCAATCCTTAATAGGGATTATTTAGTTTTGTAACAGCCGAGGACGATAACGGAGCCCCCTACATATCTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCCAAAGCGCTAATATTTAGCATCATCTATGGTGCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCCGTGTCTAGGGCTTGTCGCAGGGTATTGAAGTCGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCTACCTTCTTAGTGATAGCAACCTATTCTCTGGTAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGTGTGGTCGAGCTCATAGGCTTTGCCTACGTTGAATGCAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGGTATACCTATGATCTTGAGTAGACTAAGGCATAGGTAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGTAACAAAGGAGAAAAGAGATGGCAGACCTTATTTGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTATTTGTCACCTCTCTCACTAGTTACCCCTTAAGCTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCTGCCATTGGCGGAAGGCACTCTGCTGCTGCTCATATGCTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTCCTATTCCTTTCCGCGCAATCCCACGCGCGGAAAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAAGCATATCATAGATAAAGCCTTAGCTTAGACAATGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACACGACGACGACGACGATCTTTTCTGAAATCCCAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTCATTAGTATCATAAGGGTGTGGGTGGTGAGGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGGATAGCTGCATCCTGGTTTCCAGGAACGGCGGCTATAAGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGAGGAGGTGTATTGGATGAGGGCAAAGCTAGAAAAGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGCGTTCAGAGCTGACACCTTTTGCTGGTGAAGCGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCTTGGGGGAGGGGGCAGCATAGGGAACCATAGACGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTAAGACTAGCTCTACTAGATGCGGACAAACTACAGGCGGTAAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACCAGGCAACTTCAGCCCATCGAAGCCGGCATCAGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACGTACATGTTTGTCACGGATGATAGCATGATCCCGGAGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACAAGTCATCAGCTGCTCCTGGGTAGCGACATACTCGGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|48|12|5629116-5630324|PILER-CR
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCAGCTAGCTGGTTTTCCTCTTCTGCAGCGTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGCTTCCAGAGGTGTCCCGGTACGAAATCTACCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGTGTCAATGGCTTTGGGTTCGGTGTGTACCTAAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGCTCCGCGCGATCAATATCCGCGCCAATCAGTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTCTTGATTCCGCCAAAGCGTTTGGTGCGCTGTG
GTTTCAATCCTTAATAGGGATTATTTAGTTTTGTAAC	AGCCGAGGACGATAACGGAGCCCCCTACATATCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCAAAGCGCTAATATTTAGCATCATCTATGGTGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCGTGTCTAGGGCTTGTCGCAGGGTATTGAAGTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTACCTTCTTAGTGATAGCAACCTATTCTCTGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTGTGGTCGAGCTCATAGGCTTTGCCTACGTTGAATGCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGTATACCTATGATCTTGAGTAGACTAAGGCATAGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTAACAAAGGAGAAAAGAGATGGCAGACCTTATTTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATTTGTCACCTCTCTCACTAGTTACCCCTTAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCCATTGGCGGAAGGCACTCTGCTGCTGCTCATATGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCCTATTCCTTTCCGCGCAATCCCACGCGCGGAAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGCATATCATAGATAAAGCCTTAGCTTAGACAAT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACACGACGACGACGACGATCTTTTCTGAAATCCCAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTCATTAGTATCATAAGGGTGTGGGTGGTGAGGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGATAGCTGCATCCTGGTTTCCAGGAACGGCGGCTATAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGAGGTGTATTGGATGAGGGCAAAGCTAGAAAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCGTTCAGAGCTGACACCTTTTGCTGGTGAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTGGGGGAGGGGGCAGCATAGGGAACCATAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGACTAGCTCTACTAGATGCGGACAAACTACAGGCGGTAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGCAACTTCAGCCCATCGAAGCCGGCATCAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTACATGTTTGTCACGGATGATAGCATGATCCCGGAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGTCATCAGCTGCTCCTGGGTAGCGACATACTCG


>NZ_AP018254|48|46|5629116-5631051|CRISPRCasFinder
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCAGCTAGCTGGTTTTCCTCTTCTGCAGCGTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGCTTCCAGAGGTGTCCCGGTACGAAATCTACCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGTGTCAATGGCTTTGGGTTCGGTGTGTACCTAAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGCTCCGCGCGATCAATATCCGCGCCAATCAGTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTCTTGATTCCGCCAAAGCGTTTGGTGCGCTGTG
GTTTCAATCCTTAATAGGGATTATTTAGTTTTGTAAC	AGCCGAGGACGATAACGGAGCCCCCTACATATCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCAAAGCGCTAATATTTAGCATCATCTATGGTGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCGTGTCTAGGGCTTGTCGCAGGGTATTGAAGTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTACCTTCTTAGTGATAGCAACCTATTCTCTGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTGTGGTCGAGCTCATAGGCTTTGCCTACGTTGAATGCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGTATACCTATGATCTTGAGTAGACTAAGGCATAGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTAACAAAGGAGAAAAGAGATGGCAGACCTTATTTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATTTGTCACCTCTCTCACTAGTTACCCCTTAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCCATTGGCGGAAGGCACTCTGCTGCTGCTCATATGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCCTATTCCTTTCCGCGCAATCCCACGCGCGGAAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGCATATCATAGATAAAGCCTTAGCTTAGACAAT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGACGACGACGACGATCTTTTCTGAAATCCCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCATTAGTATCATAAGGGTGTGGGTGGTGAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGATAGCTGCATCCTGGTTTCCAGGAACGGCGGCTATAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGAGGTGTATTGGATGAGGGCAAAGCTAGAAAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCGTTCAGAGCTGACACCTTTTGCTGGTGAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTGGGGGAGGGGGCAGCATAGGGAACCATAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGACTAGCTCTACTAGATGCGGACAAACTACAGGCGGTAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGCAACTTCAGCCCATCGAAGCCGGCATCAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTACATGTTTGTCACGGATGATAGCATGATCCCGGAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGTCATCAGCTGCTCCTGGGTAGCGACATACTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|48|9|5629116-5631051|CRT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCAGCTAGCTGGTTTTCCTCTTCTGCAGCGTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGCTTCCAGAGGTGTCCCGGTACGAAATCTACCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGTGTCAATGGCTTTGGGTTCGGTGTGTACCTAAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGCTCCGCGCGATCAATATCCGCGCCAATCAGTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTCTTGATTCCGCCAAAGCGTTTGGTGCGCTGTG
GTTTCAATCCTTAATAGGGATTATTTAGTTTTGTAAC	AGCCGAGGACGATAACGGAGCCCCCTACATATCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCAAAGCGCTAATATTTAGCATCATCTATGGTGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCGTGTCTAGGGCTTGTCGCAGGGTATTGAAGTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTACCTTCTTAGTGATAGCAACCTATTCTCTGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTGTGGTCGAGCTCATAGGCTTTGCCTACGTTGAATGCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGTATACCTATGATCTTGAGTAGACTAAGGCATAGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTAACAAAGGAGAAAAGAGATGGCAGACCTTATTTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATTTGTCACCTCTCTCACTAGTTACCCCTTAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCCATTGGCGGAAGGCACTCTGCTGCTGCTCATATGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCCTATTCCTTTCCGCGCAATCCCACGCGCGGAAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGCATATCATAGATAAAGCCTTAGCTTAGACAAT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	ACGACGACGACGACGATCTTTTCTGAAATCCCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCATTAGTATCATAAGGGTGTGGGTGGTGAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGATAGCTGCATCCTGGTTTCCAGGAACGGCGGCTATAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGAGGTGTATTGGATGAGGGCAAAGCTAGAAAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCGTTCAGAGCTGACACCTTTTGCTGGTGAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTGGGGGAGGGGGCAGCATAGGGAACCATAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGACTAGCTCTACTAGATGCGGACAAACTACAGGCGGTAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGCAACTTCAGCCCATCGAAGCCGGCATCAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTACATGTTTGTCACGGATGATAGCATGATCCCGGAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGTCATCAGCTGCTCCTGGGTAGCGACATACTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

>NZ_AP018254|48|13|5630428-5631051|PILER-CR
	CTGCAGCTAGCTGGTTTTCCTCTTCTGCAGCGTTC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCAAGGCTTCCAGAGGTGTCCCGGTACGAAATCTACCGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AGTGTCAATGGCTTTGGGTTCGGTGTGTACCTAAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGCTCCGCGCGATCAATATCCGCGCCAATCAGTAGGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTCTTGATTCCGCCAAAGCGTTTGGTGCGCTGTG
GTTTCAATCCTTAATAGGGATTATTTAGTTTTGTAAC	AGCCGAGGACGATAACGGAGCCCCCTACATATCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCAAAGCGCTAATATTTAGCATCATCTATGGTGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CCGTGTCTAGGGCTTGTCGCAGGGTATTGAAGTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTACCTTCTTAGTGATAGCAACCTATTCTCTGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTGTGGTCGAGCTCATAGGCTTTGCCTACGTTGAATGCA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGTATACCTATGATCTTGAGTAGACTAAGGCATAGGTA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTAACAAAGGAGAAAAGAGATGGCAGACCTTATTTG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TATTTGTCACCTCTCTCACTAGTTACCCCTTAAGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTGCCATTGGCGGAAGGCACTCTGCTGCTGCTCATATGCT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TCCTATTCCTTTCCGCGCAATCCCACGCGCGGAAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGCATATCATAGATAAAGCCTTAGCTTAGACAAT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACACGACGACGACGACGATCTTTTCTGAAATCCCAGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAACTCATTAGTATCATAAGGGTGTGGGTGGTGAGGTGTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GGATAGCTGCATCCTGGTTTCCAGGAACGGCGGCTATAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GAGGAGGTGTATTGGATGAGGGCAAAGCTAGAAAAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GCGTTCAGAGCTGACACCTTTTGCTGGTGAAGC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CTTGGGGGAGGGGGCAGCATAGGGAACCATAGAC
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	TAAGACTAGCTCTACTAGATGCGGACAAACTACAGGCGGTAA
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	CAGGCAACTTCAGCCCATCGAAGCCGGCATCAGT
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	GTACATGTTTGTCACGGATGATAGCATGATCCCGGAG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC	AAGTCATCAGCTGCTCCTGGGTAGCGACATACTCG
GTTTCAATCCCTAATAGGGATTATTTAGTTTTGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_157780819.1\|5624284_5624440_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625302.1\|5636449_5637475_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
NZ_AP018254.1\|WP_096625308.1\|5641278_5641554_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_AP018254.1\|WP_096625298.1\|5634034_5634883_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NZ_AP018254.1\|WP_096625290.1\|5626982_5627678_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_AP018254.1\|WP_096625284.1\|5621095_5622751_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_AP018254.1\|WP_096625288.1\|5625584_5626919_+\|ATPase	unknown	unknown	gnl\|CDD\|273349
NZ_AP018254.1\|WP_096625306.1\|5640923_5641298_-\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|375906
NZ_AP018254.1\|WP_096625278.1\|5618820_5619240_-\|plastocyanin	unknown	unknown	gnl\|CDD\|235060
NZ_AP018254.1\|WP_096626540.1\|5627860_5628409_-\|phycobiliprotein-lyase	unknown	unknown	gnl\|CDD\|381208
NZ_AP018254.1\|WP_096625304.1\|5637552_5640918_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	cas10d	cd09712_cas10d_CAS-I-D	gnl\|CDD\|274469
NZ_AP018254.1\|WP_157780820.1\|5641546_5641717_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376177
NZ_AP018254.1\|WP_096625296.1\|5633220_5633862_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP018254.1\|WP_096625294.1\|5632021_5633026_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|274976
NZ_AP018254.1\|WP_096626538.1\|5623126_5624263_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_AP018254.1\|WP_096625282.1\|5620357_5621032_+\|alpha-ketoglutarate-dependent-dioxygenase-AlkB	unknown	unknown	gnl\|CDD\|225687
NZ_AP018254.1\|WP_096625300.1\|5635730_5636444_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|187842
NZ_AP018254.1\|WP_096625292.1\|5631323_5631596_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP018254.1\|WP_096625280.1\|5619603_5620095_-\|cytochrome-c-550	unknown	unknown	gnl\|CDD\|184185
NZ_AP018254.1\|WP_096625286.1\|5624583_5625426_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|215135

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096625302.1\|5636449_5637475_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	6.96021e-175
NZ_AP018254.1\|WP_096625308.1\|5641278_5641554_-\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	1.25356e-24
NZ_AP018254.1\|WP_096625298.1\|5634034_5634883_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	3.83529e-52
NZ_AP018254.1\|WP_096625290.1\|5626982_5627678_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	1.327e-67
NZ_AP018254.1\|WP_096625284.1\|5621095_5622751_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_AP018254.1\|WP_096625288.1\|5625584_5626919_+\|ATPase	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	1.0398e-102
NZ_AP018254.1\|WP_096625306.1\|5640923_5641298_-\|DUF5615-family-PIN-like-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	4.7907e-23
NZ_AP018254.1\|WP_096625278.1\|5618820_5619240_-\|plastocyanin	gnl\|CDD\|235060	PRK02710, PRK02710, plastocyanin; Provisional.	1.90463e-63
NZ_AP018254.1\|WP_096626540.1\|5627860_5628409_-\|phycobiliprotein-lyase	gnl\|CDD\|381208	cd19433, lipocalin_CpcS-CpeS, CpcS/CpeS phycobiliprotein lyase family. Phycobilin lyases covalently attach a chromophore to the Cys residue(s) of cyanobacterial phycobiliproteins. They include Synechococcus sp. PCC 7002 phycocyanobilin lyase CpcS which attaches a phycocyanobilin chromophore to C-phycocyanain beta subunit and to allophycocyanin alpha and beta subunits, Synechococcus sp. PCC 7002 phycocyanobilin lyase subunit CpcU which forms a heterodimer with CpcS-I to attach phycocyanobilin to beta-phycocyanin and to allophycocyanin subunits, and Prochlorococcus marinus phycoerythrobilin lyase CpeS which attaches 3Z-phycoerythrobilin to phycoerythrin. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development.	6.80026e-38
NZ_AP018254.1\|WP_096625304.1\|5637552_5640918_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	gnl\|CDD\|274469	TIGR03174, cas_Csc3, CRISPR type I-D/CYANO-associated protein Csc3/Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc3 for CRISPR/Cas Subtype Cyano protein 3, as it is often the third gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	0
NZ_AP018254.1\|WP_157780820.1\|5641546_5641717_-\|hypothetical-protein	gnl\|CDD\|376177	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated. An alpha+beta fold domain associated with restriction enzymes across prokaryotes and fused to JAB deubiquitinases, and chromatin proteins in a wide range of eukaryotes. The domain is predicted to function as a modified-DNA reader domain.	0.00222027
NZ_AP018254.1\|WP_096625296.1\|5633220_5633862_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.20807e-53
NZ_AP018254.1\|WP_096625294.1\|5632021_5633026_-\|type-I-D-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274976	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes a clade of Cas1 limited to the CYANO subtype of CRISPR/Cas system and most often the type found there.	4.31618e-144
NZ_AP018254.1\|WP_096626538.1\|5623126_5624263_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	3.69081e-76
NZ_AP018254.1\|WP_096625282.1\|5620357_5621032_+\|alpha-ketoglutarate-dependent-dioxygenase-AlkB	gnl\|CDD\|225687	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair].	8.7545e-36
NZ_AP018254.1\|WP_096625300.1\|5635730_5636444_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	gnl\|CDD\|187842	cd09711, Csc1_I-D, CRISPR/Cas system-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog; also known as CasA/Cse1 family.	5.40886e-85
NZ_AP018254.1\|WP_096625292.1\|5631323_5631596_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.92396e-37
NZ_AP018254.1\|WP_096625280.1\|5619603_5620095_-\|cytochrome-c-550	gnl\|CDD\|184185	PRK13618, psbV, cytochrome c-550; Provisional.	2.86907e-108
NZ_AP018254.1\|WP_096625286.1\|5624583_5625426_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	1.5197e-133

>NZ_AP018254.1|WP_096626540.1|5627860_5628409_-|phycobiliprotein-lyase
MSIQEFQAFFDCCVGKWSTERTYHYLTKREVERSHTDFVVEPITDTAKLQVLQDNQFPIPTNLEILPGYHLEFETVSETGEKVSQQLNMLFVTEGNGKIITGQYLRDRAYEEDRPIVADFQFDISKCELLMTTKYTRVVAVDSITLINPNLRIRKIITYCRPEDNQPLQEVVLVGFGVEQKA
>NZ_AP018254.1|WP_096625290.1|5626982_5627678_+|TrkA-family-potassium-uptake-protein
MDLSSLGFFRSLRKDNHQFAVIGLGRFGRSVCSTLHRLGYQVLATDIDEKRVADALSEKIVGHAVQLDSTEPAALKEAGLFEFDTVIIAIGNYIQESIITTLNVKEGGVPHVIAKASTEVHCKLLKRVGADHVVFPEYEAGSSLARTLTKPSILERFDLDPEHSIVEIIVPDEFDGKTVAELQLRNRYGLNLLAVSQDGKFKINPDPYQRLYKGAAMVVIGCNKDINRLPI
>NZ_AP018254.1|WP_096625288.1|5625584_5626919_+|ATPase
MTVSRTICFGFLAVILLGTVLLMMPFSTTTGTWNDLIVALFTSTSAVCVTGLSIVDVSTHFSFWGELWIMLLAQIGGLGYMTTTTFLILLTGRKFDLRQKIAIQQALDRPGMSGSRQIIRSIIATTLIFELTGVFLLMTTFVPEFGWREGLWLAIFHSVSAWNNAGFGLFSDSLVKYQTSPLVIFTISMLIICGGIGYQVLIETYMWLRDRILQRQAKLIFSLDFKVATSTTLILLVLGTVAFFGVETRNPSTFGGYSIADKFLLAWFQSVTTRTAGFNSVDIGKMTTAGLFITIALMFIGASPGGTGGGIKTTTLRVLTSCTKSILQGKEEVLLYERKIPLQLILKAVGVLVGSIAAVLSVTILIALTDPKLPFIQILFETVSAFATVGLSTGITASVSTAGKLILIVTMYMGRVGVLLLMSAILGDPQPTRIHYPEENLRVG
>NZ_AP018254.1|WP_096625286.1|5624583_5625426_-|methyltransferase-domain-containing-protein
MNTSLNNRIQNFYDASSGLWEQIWGEHMHHGYYGADGLTKKERRQAQIDLIEELLHWSNPNPVTNLLDVGCGIGGSSLYLAQRYHARATGITLSTVQAQRAQERASEQGLSARTNFLVADALNMPFEDNSFDLVWTLESGEHMPDKVKFLQECYRVLQPGGTLIMATWCHRPTDQSPLNQNEQKLLADIYRVYCLPYVISLPEYTEIATKLPLKDLKIADWSAAVAPFWNVVIDSAFTPQALFGLLRAGWTTIQGALALGLMRQGYESGLIRFGLVCGRK
>NZ_AP018254.1|WP_157780819.1|5624284_5624440_-|hypothetical-protein
MYLCDQQFEKMGLNAIAIFLVSAFQVRDCSPIAIVIKMRSQYPKFKYGDRP
>NZ_AP018254.1|WP_096626538.1|5623126_5624263_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MDIYSSLKALGIAEPSGFGWLAVVFTFLLAWIVTWRFIPVVRKFALRVGWADQPNARRLNREPLPNAGGLAIYAGVIAALVLASLLRPIEIQSVLAQVLTILLGGSILVLVGFIDDQFGLPSSIRLLVQVFTALLLVANKISIQVTIGTPFDPTLSTLLTVLWVVGITNAINLMDGMDGLVGGIGFITSMSLLAVSAQSFNRAAATLVLAALAGAALGFLRHNFHPSRIIMGDAGAYFFGYVLAATTILGKLQASTVFALFPSVLFVLLPVLDTTQVIIRRLMAGKNPLNTPGKDHIHHRLLAWGLSQRRAALTLWLIALGSNILAMWLQNMSWFQISATTTGIVILLAFTVWQRVRAARIPPSPPDMMVSSAVKDEG
>NZ_AP018254.1|WP_096625284.1|5621095_5622751_-|chaperonin-GroEL
MAKIVAFDDESRQALERGINALADAVKITLGPKGRNVLLEKKFGAPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDTAGDGTTTATVLAQAMIREGLRNVTAGSNPIALKRGIDKTVEALVEEIAKVAKPVEGSAIAQVATVSAGNDEEVGAMIAEAMERVTKDGVITVEESKSLSTELEVVEGMQLDRGYISPYFITNNERMTVEFENPRILITDKKISNIQELVPVLEKVARSGQPLLIIAEDIEGDALATLVVNKARGVLNVCAIKAPGFGERRKAMLQDIAVLTKGQMISEEIGLSLDTATLEMLGTARKVEIDKESTTIVAAGDNAADVQARIAQIRKQLAETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLAKKVAEFKQTLTNEDEVVGADILARSLEAPLCQMANNAGAEGAVIVSRVRDTEFNIGYNAITGQMEDMIASGIVDPAKVVRSALQNAASIAGMVLTTEAIVVEKPEKKAPAPDMGGMGGMGGMGGMGMGMM
>NZ_AP018254.1|WP_096625282.1|5620357_5621032_+|alpha-ketoglutarate-dependent-dioxygenase-AlkB
MSKTVINCNKLPLPEIIKLPNGEPTPQAEILLYKDFFSGVNAQSIYQELLNNIKWRQDPIKLYGKEMLQPRLTAWYGEPGVVYTYSGITMYPQPWTDTLLQVKQQVEMAVNINNTEEDKQIEFNSVLLNRYRHGQDSMGWHSDDEPELGANPLIASVSFGETRRFLLRHRHDKHLPKLEIPLNHGSLLIMAGQTQHYWQHHIPKTAKPIGERINLTFRVIRTNP
>NZ_AP018254.1|WP_096625280.1|5619603_5620095_-|cytochrome-c-550
MLRRIIGVFVATVVLTFQFAIASANAVELDAKIRTVPLNEKGDTLTLSLKQVKEGKQLFQYACAQCHAGGVTKTNQNVGLDPETLALATPPRNNIENLVDYMKNPTTYDGEEEISELHPSLKSADIFTEMRNLKEEDLVAIAGHILMQPKVVGEKWGGGKIYY
>NZ_AP018254.1|WP_096625278.1|5618820_5619240_-|plastocyanin
MKAIAEQIRRIGLLVVTLVLVAGTLAIFAPTAAAETYTVKLGSDKGMLAFEPAKISIKPGDTIKWENNKLPPHNIVFDSVKNPAKSADLAKALSHKQLMMNPGQALETTFPADAPAGEYTFYCEPHRGAGMVGKVIVEG
>NZ_AP018254.1|WP_096625292.1|5631323_5631596_-|CRISPR-associated-endonuclease-Cas2
MFVVVSYDIPQDKRRTKIHRILKSYGQWMQYSVFECDLTDTQYAKLRSRLSKLIKPDEDSVRFYFLCACCQGKVERIGGEMPRDNSIFLV
>NZ_AP018254.1|WP_096625294.1|5632021_5633026_-|type-I-D-CRISPR-associated-endonuclease-Cas1
MGTLYVTQEDAFIAKVDERLNVKYDKKTILDVPLIKIDGLVVMGRVSISPMAISELINHKIPLTFLTANGKYIARLEPEMSKNVYLRNAQWKAAGESFQALHVVKGFVRGKLKNYRYALAKTQRSYSDVDLCENLTTLGNAIASLETAATIDSVRGYEGVGSAAYFACFNQLLRNENFCFTNRNRRPPVDPVNSLLSLGYSLLRHDIQGALNIVGFDPYLGYLHVERYGRPSLALDLMEEFRPLIVDAVVISAINRKIFKPSDFVTEPVSNAVSLTKEALHTFLRLYQEKKLTKFKHPVLGIQKTYQESFEIQARLLGKYLMGEIDKYPPLVMK
>NZ_AP018254.1|WP_096625296.1|5633220_5633862_-|CRISPR-associated-protein-Cas4
MNNQKETLSSVICNSAVSTDDYISIAALNQYSYCPHRCWRMHCLGDFMDNQYTIEGTSLHERVHTIGDSNREEVWQVRAIWLKSDKYKLIGKSDLIELENGEWYPVEYKRGRKGEWDNDELQVCAQALCLEEMTGKSIGVGYVYYAQTHQRQLIEINQELRQQTITAIAEVTKLLKTGMMPRAVYSQRCKGCSLEPQCLPKVGEKIRKYCETD
>NZ_AP018254.1|WP_096625298.1|5634034_5634883_-|CRISPR-associated-endoribonuclease-Cas6
MPHSLILNLIPKSPIYPNYLTGRHYHALFLNLISSVDRNLGDKLHDSTADKAFTLSPLQVQTNHRYQHKNSQYSKLLQVEQPQPIPPGTPCWWRISLLDDTLFGKLTPLWLNINPEQPWRLGSADLFITSILATPQSTQPWANSCSYGQLYQQASDSERVISLSFATPTAFRQGKYDTTLPTRESVFNSLLSRWNKYSGIEFTKVNLESVFPSFINIHTEIVADSRSKFIGIVGEVSYRIMGDIEAMEIKRINALADFAIFAGVGRKTTMGMGMVRRVNNNS
>NZ_AP018254.1|WP_096625300.1|5635730_5636444_-|type-I-D-CRISPR-associated-protein-Cas5/Csc1
MSFIYHCQIELHDSMYHATREIGRLYETEPIIHNYALCYALGLIDSDKYATNVPEEDSYRYFCPEQVPKYEQHLTPLNQQGIYVTPAASIHHTSVLNTWKYANNNYHVEMEKTQKNIPSFGRAKEIAPESQFEFFIISQKDIKDLLPKWIRLGKWMSKAEVMVNKLAEAPVTEGLFTCKHPLNPLDVMFTNQVFSYDVVNMPPVSLIQNVQMRGQYYQIKEMKEMKIPARMAYYFRS
>NZ_AP018254.1|WP_096625302.1|5636449_5637475_-|type-I-D-CRISPR-associated-protein-Cas7/Csc2
MNFLKTVDAKFFHNEIPAKPMGKYAHFVTIRITESYPLFQTDGELNKVKVRAGIQHAEAISRLAMFKRKQSTPERLTGRELLRNYKIGDWEKCDYNVDFSKTTPDCILYGFAIGDAGSEKSKVVVDTAFSITPFDDSHLNFTLNAPYENGTMSRNGEVTSRINSQDHILPQVFFPSIVTLKDPTEAGFLYIFNNILRTRHYGAQTTRTGRVRNELMGVIFADGEIVSNLRWTQKIYDLLSFDGKINPPDPLNEDDVRKAAIKAINELMTQEYVTHTDYIGENFTPLLDEVKLITSNEAKLQELLTQANLESSAYAQKYISKNSEAKNSEKGKKGKKAAAME
>NZ_AP018254.1|WP_096625304.1|5637552_5640918_-|type-I-D-CRISPR-associated-protein-Cas10d/Csc3
MNNLEDNLENLDDELPEEVPDYDFTKEEDDDEFLLKKELLTIRLFIEAVKKSKGNQDDATLEKFAKYVLPHIILQLAGATAKGGKFFDVTIPKINAKRASEGKPPVDSTRNAGDQSIIAHLLNGLFPTYRIIKELQKSSVTNPVKRNLGELQVCIFIVAYLLHDYEKFPDYIAWLIENNVADRDWELEPPQKADAPNLGRDYIAKKIQDFGLHHLLGENWRDFIDDIIEISSNSGVKHDSDLGLATRGLKTLDDDRLDSRIRQDLIDLVSLSDLFASVVKHPRDVETGRLPNLISRLSNHQLKLTYHSLCENRGVLTNILNNAIIEAHPEEFYTPLLYLPDGVVYLASQDATEINTDDIPERVVNKVKYLCGEKLRERQTGFNRDGKGFKFADYYWLFFDVIGLMKVSIDAACRLLPDGKTASSGKRGESLQSYQTQGELSTNLNLQFPSEIRIDRLAEFGDILCRGIWGSWCERVKQAQKDIPKAKRKIPPELDLTQKLAEYLGLSDEIPAIKQIQSLKKTGGVPLDWYYLAAQYFRKHPGKDFAQILEVMRGMVSYAEGIIQPILQEFQDIPDGWKDLKIYVQRVIFLPTQAVVTPEIDPFLEELRRYQAAKVTGRGRENVCAMSSSAYTVTEQMESATLFAPQVYSNRQILFNAQAAKRQICSIWSIEIMLRQILMNQTNAVGADFEGRKYRYLYLYPTYFFTPETNKFLQLAYNQFARTRFDAELRKHFITEKQIAKFDITNYQQVDTLLIKESLKPEDDKTFKISFPEQETLTFFFLGLPPGRDATDTESWVTPAWLALTLPLVMDVKVVASESPVPPFISGADFAETVLLDGEHQAIRSLVKKDIYRLDSILPRNSEKREFSPLNALTAAYCIHLEVNRKKDGDPDWGKLSDLARDLETSPLYVFHYLTKWLRKPKKDKDNQQKTMDSVPIAKIRLYMDLYKYFEPGEETVNKLRKLTELYRRFYRAKSSYAKANAILKPIDEAADVILKIDKAVVPDTESLTDVVAARLAKLMNNVRRRTAEGKPTLTFVDGKWKPALTSEQERQAVYDFAQYFVEEIFKESFKSDRARLAGTQLNLIRDTCEYLYRLTDDEERKNLPQTEPEDIPDLGVDDAA
>NZ_AP018254.1|WP_096625306.1|5640923_5641298_-|DUF5615-family-PIN-like-protein
MKLKLDENIDLRVLSLLRLAGHDVATIPGQALNSASDEEVIEVCRSKGRCLITCDRGFGNRLKYNPENYPGIVIIRLPSRFTFTNWREAIEILINALETADVTGKLWVIQTGQVQEFQAIEPEG
>NZ_AP018254.1|WP_096625308.1|5641278_5641554_-|DUF433-domain-containing-protein
MIRNDLLSRISIDPNICFGKPCIRGHRIWVSLILDYLASGTTIEEVLEAYPSIEREDVLACIAYGAEMARGVFVELPLDKKKKRAHEIKVR
>NZ_AP018254.1|WP_157780820.1|5641546_5641717_-|hypothetical-protein
MKDGYVRKIEEFDKPSPLAAKVNGGAANGWEYIEVKKNDQWIRLEELRQIWRNTND

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Crispr_ID: NZ_AP018254_49

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_49

5646958-5647068

TypeI-D

Consensus_repeat	Method
GGTGTAGGGATGGGAAAACAGGGGGTCGGAACAAACTAC	CRISPRCasFinder

1 spacers

WYL,cas3,cas10d,csc2gr7,csc1gr5

The CRISPR arrays of NZ_AP018254_49

>merge|NZ_AP018254|49|5646958-5647068|CRISPRCasFinder
GGTGTAGGGATGGGAAAACAGGGGGTCGGAACAAACTACATATTCCAAATCTTTTTACACTCTGTGGTGTCAGGTGTAGGGATGGGAAAACAGGGGGTCGGAACAAACTAC

>NZ_AP018254|49|47|5646958-5647068|CRISPRCasFinder
GGTGTAGGGATGGGAAAACAGGGGGTCGGAACAAACTAC	ATATTCCAAATCTTTTTACACTCTGTGGTGTCA
GGTGTAGGGATGGGAAAACAGGGGGTCGGAACAAACTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096626544.1\|5643898_5644753_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_AP018254.1\|WP_096625302.1\|5636449_5637475_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
NZ_AP018254.1\|WP_096626546.1\|5656266_5656926_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625310.1\|5645072_5645936_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|235186
NZ_AP018254.1\|WP_096625323.1\|5655231_5656113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625325.1\|5657512_5657917_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625321.1\|5654195_5655209_-\|transposase	unknown	unknown	gnl\|CDD\|369439
NZ_AP018254.1\|WP_096625327.1\|5658088_5658445_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
NZ_AP018254.1\|WP_157780820.1\|5641546_5641717_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376177
NZ_AP018254.1\|WP_096625317.1\|5652536_5653769_+\|glycoside-hydrolase-family-10-protein	unknown	unknown	gnl\|CDD\|224563
NZ_AP018254.1\|WP_096625312.1\|5646087_5646816_-\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223710
NZ_AP018254.1\|WP_096625314.1\|5647330_5649934_-\|polynucleotide-kinase-phosphatase	unknown	unknown	gnl\|CDD\|274963
NZ_AP018254.1\|WP_096625300.1\|5635730_5636444_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|187842
NZ_AP018254.1\|WP_096626542.1\|5641697_5643797_-\|type-I-D-CRISPR-associated-helicase-Cas3'	cas3	cd09710_cas3_CAS-I-D	gnl\|CDD\|187841
NZ_AP018254.1\|WP_096625304.1\|5637552_5640918_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	cas10d	cd09712_cas10d_CAS-I-D	gnl\|CDD\|274469
NZ_AP018254.1\|WP_096625319.1\|5653815_5654139_-\|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl\|CDD\|376987
NZ_AP018254.1\|WP_096625315.1\|5650913_5652308_-\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	unknown	unknown	gnl\|CDD\|274962
NZ_AP018254.1\|WP_096625308.1\|5641278_5641554_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_AP018254.1\|WP_096625329.1\|5658639_5660175_+\|phenylacetate--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|224458
NZ_AP018254.1\|WP_096625306.1\|5640923_5641298_-\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|375906

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096626544.1\|5643898_5644753_+\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.18271e-08
NZ_AP018254.1\|WP_096625302.1\|5636449_5637475_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	6.96021e-175
NZ_AP018254.1\|WP_096625310.1\|5645072_5645936_+\|M48-family-metalloprotease	gnl\|CDD\|235186	PRK03982, PRK03982, heat shock protein HtpX; Provisional.	1.70569e-159
NZ_AP018254.1\|WP_096625321.1\|5654195_5655209_-\|transposase	gnl\|CDD\|369439	pfam07592, DDE_Tnp_ISAZ013, Rhodopirellula transposase DDE domain. These transposases are found in the planctomycete Rhodopirellula baltica, the cyanobacterium Nostoc, and the Gram-positive bacterium Streptomyces.	0.000240896
NZ_AP018254.1\|WP_096625327.1\|5658088_5658445_+\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	4.84629e-40
NZ_AP018254.1\|WP_157780820.1\|5641546_5641717_-\|hypothetical-protein	gnl\|CDD\|376177	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated. An alpha+beta fold domain associated with restriction enzymes across prokaryotes and fused to JAB deubiquitinases, and chromatin proteins in a wide range of eukaryotes. The domain is predicted to function as a modified-DNA reader domain.	0.00222027
NZ_AP018254.1\|WP_096625317.1\|5652536_5653769_+\|glycoside-hydrolase-family-10-protein	gnl\|CDD\|224563	COG1649, COG1649, Uncharacterized protein conserved in bacteria [Function unknown].	1.53724e-136
NZ_AP018254.1\|WP_096625312.1\|5646087_5646816_-\|HAD-family-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.07421e-45
NZ_AP018254.1\|WP_096625314.1\|5647330_5649934_-\|polynucleotide-kinase-phosphatase	gnl\|CDD\|274963	TIGR04075, Ser/Thr_phosphatase_family_protein, polynucleotide kinase-phosphatase. Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring. [Transcription, RNA processing].	0
NZ_AP018254.1\|WP_096625300.1\|5635730_5636444_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	gnl\|CDD\|187842	cd09711, Csc1_I-D, CRISPR/Cas system-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog; also known as CasA/Cse1 family.	5.40886e-85
NZ_AP018254.1\|WP_096626542.1\|5641697_5643797_-\|type-I-D-CRISPR-associated-helicase-Cas3'	gnl\|CDD\|187841	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Diverged DNA helicase Cas3'; signature gene for Type I and subtype I-D.	2.79842e-80
NZ_AP018254.1\|WP_096625304.1\|5637552_5640918_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	gnl\|CDD\|274469	TIGR03174, cas_Csc3, CRISPR type I-D/CYANO-associated protein Csc3/Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc3 for CRISPR/Cas Subtype Cyano protein 3, as it is often the third gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	0
NZ_AP018254.1\|WP_096625319.1\|5653815_5654139_-\|divalent-cation-tolerance-protein-CutA	gnl\|CDD\|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	7.83938e-50
NZ_AP018254.1\|WP_096625315.1\|5650913_5652308_-\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	gnl\|CDD\|274962	TIGR04074, Methyltransferase_type_12, 3' terminal RNA ribose 2'-O-methyltransferase Hen1. Members of this protein family are bacterial Hen1, a 3' terminal RNA ribose 2'-O-methyltransferase that acts in bacterial RNA repair. All members of the seed alignment belong to a cassette with the RNA repair enzyme polynucleotide kinase-phosphatase (Pnkp). Chemically similar Hen1 in eukaryotes acts instead on small regulatory RNAs. [Transcription, RNA processing, Protein synthesis, tRNA and rRNA base modification].	0
NZ_AP018254.1\|WP_096625308.1\|5641278_5641554_-\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	1.25356e-24
NZ_AP018254.1\|WP_096625329.1\|5658639_5660175_+\|phenylacetate--CoA-ligase-family-protein	gnl\|CDD\|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	1.39551e-61
NZ_AP018254.1\|WP_096625306.1\|5640923_5641298_-\|DUF5615-family-PIN-like-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	4.7907e-23

>NZ_AP018254.1|WP_096625312.1|5646087_5646816_-|HAD-family-phosphatase
MGLKAVLFDFNGVIINDEPIHKQLVAEILLTENLVLKKGEYEQTCLGKSERDCFRNLIGSRGRVVNDDYLLQILQRKLKRYIEEMEKLEKLPLFAGLDDLIFQIRSRNLKLGIVSEGLRSAVDFVLNKTNLGEYFQVIVSGEEITTTKPEPDGYMLAVQRLNEKFPDLNLLPRDCLVIEDTLVGIKAAKRARMQVVGVAHTYPFHMLQRQANWTIDFLTDLDLERVIEVFKNREKEKENIQK
>NZ_AP018254.1|WP_096625310.1|5645072_5645936_+|M48-family-metalloprotease
MGNQLKTAALLAALSGLLIAISYWVVGGTTGIIIGIAIAAATNLFSWYQSDRIALAAYGAQEVNESQAPQLYRMVRKLAEQANLPMPRVCIVPSASPNAFATGRDPEHAAVAVTEGIMQILPPDELEAVIAHELSHIANRDTLTQAVAATVAGAISFLGQMLSYSMWFGGSRDNERGGNPIGVLATVILAPFAATVLQMAISRTREFSADAGAAKLTRNPRALASALQRLEAAAKGIPFHGANPAFEPLLIINPFSGEAIANLFRTHPSTEQRVAALLELERELSSL
>NZ_AP018254.1|WP_096626544.1|5643898_5644753_+|WYL-domain-containing-protein
MSRKGQSITLSISERDKSELETLALEFGMKWGDKPNISRLVEAIARRQLLLGNNNDWTPSRIRALDRAMRGFVDMGENEQAWEIGKLLLERSELSTPLRTQIEEFLGNPPAAWRLRVEQLIKRQQPFQLSYEDAAHRVWNFTVCYARITNHEKRQYLDCWCEETEGNQDIEELQHNWCLRFDRIQDAAVVEIDRKWRSHLAEVEVSMHLFGGLAFAYQGKPEDVLVEWIPEKQRVKKVIRRVTSTFWFIREVMQYAPDCIVVTPNSIRDRIKAKIRTLSDLYEM
>NZ_AP018254.1|WP_096626542.1|5641697_5643797_-|type-I-D-CRISPR-associated-helicase-Cas3'
MSSYRIYLQPVFSQTIPTPNGVKIPNGWSLSWHQGETYKALQDPQVEVIFNTAMTGDGKSLAAFLPSMNQRMYTLGMYPTNELVRDQEKQVQAYKAQFQPHYDPQIYRLTAAILENYVDGVKLPAKLEGLEDISSNHEILLTNPDLFHYIHNFYYLRGKIDNPDRLFRRIDERYKLFIYDEFHIFSSPQIASVINTIFLIRNTANHPKKFLFLSATPSELLQGYFEKAGIKVKIINPIDAGAYQFTVDSYQQEWRQISQPITLNFPSGLEPNLRSSREWIEENLETVILKFFQDNPNSKGAIILNSIAAVKKLLPKFKAVFEPRWQVRENTGLTGETEKRDSIAEADLLIGTSTIDVGVDFRINFLIFEAADAGNFIQRFGRLGRHPGFSIYQAYALIPNFLVARLFVEESHPLEENQTYDRINFTDAIRSVWINRNEFERYPQRWGGMQSADIYSKLCRMKEKYPDVAKKFGTHIQKALGISIKQINAQFYRCQNEGKNKIIDEARSFRGSSQLDCAIYDLTNPDEPETDRFKTYHLPGILSNFIFEIWDKNSFMEKAKTAGVSTKRFEKALCYLKLKDFRDVREDWYFYYPGNIREFAQTSKVQLLKNLEICQPHGYGIQQISDAVSRRKLVCFISDRDRNYLRAVLRLPMHFQIYPLTNQPENRGSWYSIAFGQDALLLETLTWYWKPKEDEGWIC
>NZ_AP018254.1|WP_157780820.1|5641546_5641717_-|hypothetical-protein
MKDGYVRKIEEFDKPSPLAAKVNGGAANGWEYIEVKKNDQWIRLEELRQIWRNTND
>NZ_AP018254.1|WP_096625308.1|5641278_5641554_-|DUF433-domain-containing-protein
MIRNDLLSRISIDPNICFGKPCIRGHRIWVSLILDYLASGTTIEEVLEAYPSIEREDVLACIAYGAEMARGVFVELPLDKKKKRAHEIKVR
>NZ_AP018254.1|WP_096625306.1|5640923_5641298_-|DUF5615-family-PIN-like-protein
MKLKLDENIDLRVLSLLRLAGHDVATIPGQALNSASDEEVIEVCRSKGRCLITCDRGFGNRLKYNPENYPGIVIIRLPSRFTFTNWREAIEILINALETADVTGKLWVIQTGQVQEFQAIEPEG
>NZ_AP018254.1|WP_096625304.1|5637552_5640918_-|type-I-D-CRISPR-associated-protein-Cas10d/Csc3
MNNLEDNLENLDDELPEEVPDYDFTKEEDDDEFLLKKELLTIRLFIEAVKKSKGNQDDATLEKFAKYVLPHIILQLAGATAKGGKFFDVTIPKINAKRASEGKPPVDSTRNAGDQSIIAHLLNGLFPTYRIIKELQKSSVTNPVKRNLGELQVCIFIVAYLLHDYEKFPDYIAWLIENNVADRDWELEPPQKADAPNLGRDYIAKKIQDFGLHHLLGENWRDFIDDIIEISSNSGVKHDSDLGLATRGLKTLDDDRLDSRIRQDLIDLVSLSDLFASVVKHPRDVETGRLPNLISRLSNHQLKLTYHSLCENRGVLTNILNNAIIEAHPEEFYTPLLYLPDGVVYLASQDATEINTDDIPERVVNKVKYLCGEKLRERQTGFNRDGKGFKFADYYWLFFDVIGLMKVSIDAACRLLPDGKTASSGKRGESLQSYQTQGELSTNLNLQFPSEIRIDRLAEFGDILCRGIWGSWCERVKQAQKDIPKAKRKIPPELDLTQKLAEYLGLSDEIPAIKQIQSLKKTGGVPLDWYYLAAQYFRKHPGKDFAQILEVMRGMVSYAEGIIQPILQEFQDIPDGWKDLKIYVQRVIFLPTQAVVTPEIDPFLEELRRYQAAKVTGRGRENVCAMSSSAYTVTEQMESATLFAPQVYSNRQILFNAQAAKRQICSIWSIEIMLRQILMNQTNAVGADFEGRKYRYLYLYPTYFFTPETNKFLQLAYNQFARTRFDAELRKHFITEKQIAKFDITNYQQVDTLLIKESLKPEDDKTFKISFPEQETLTFFFLGLPPGRDATDTESWVTPAWLALTLPLVMDVKVVASESPVPPFISGADFAETVLLDGEHQAIRSLVKKDIYRLDSILPRNSEKREFSPLNALTAAYCIHLEVNRKKDGDPDWGKLSDLARDLETSPLYVFHYLTKWLRKPKKDKDNQQKTMDSVPIAKIRLYMDLYKYFEPGEETVNKLRKLTELYRRFYRAKSSYAKANAILKPIDEAADVILKIDKAVVPDTESLTDVVAARLAKLMNNVRRRTAEGKPTLTFVDGKWKPALTSEQERQAVYDFAQYFVEEIFKESFKSDRARLAGTQLNLIRDTCEYLYRLTDDEERKNLPQTEPEDIPDLGVDDAA
>NZ_AP018254.1|WP_096625302.1|5636449_5637475_-|type-I-D-CRISPR-associated-protein-Cas7/Csc2
MNFLKTVDAKFFHNEIPAKPMGKYAHFVTIRITESYPLFQTDGELNKVKVRAGIQHAEAISRLAMFKRKQSTPERLTGRELLRNYKIGDWEKCDYNVDFSKTTPDCILYGFAIGDAGSEKSKVVVDTAFSITPFDDSHLNFTLNAPYENGTMSRNGEVTSRINSQDHILPQVFFPSIVTLKDPTEAGFLYIFNNILRTRHYGAQTTRTGRVRNELMGVIFADGEIVSNLRWTQKIYDLLSFDGKINPPDPLNEDDVRKAAIKAINELMTQEYVTHTDYIGENFTPLLDEVKLITSNEAKLQELLTQANLESSAYAQKYISKNSEAKNSEKGKKGKKAAAME
>NZ_AP018254.1|WP_096625300.1|5635730_5636444_-|type-I-D-CRISPR-associated-protein-Cas5/Csc1
MSFIYHCQIELHDSMYHATREIGRLYETEPIIHNYALCYALGLIDSDKYATNVPEEDSYRYFCPEQVPKYEQHLTPLNQQGIYVTPAASIHHTSVLNTWKYANNNYHVEMEKTQKNIPSFGRAKEIAPESQFEFFIISQKDIKDLLPKWIRLGKWMSKAEVMVNKLAEAPVTEGLFTCKHPLNPLDVMFTNQVFSYDVVNMPPVSLIQNVQMRGQYYQIKEMKEMKIPARMAYYFRS
>NZ_AP018254.1|WP_096625314.1|5647330_5649934_-|polynucleotide-kinase-phosphatase
MTKINIPELSLITLIGASGSGKSTFAHQHFQPFEVISSDFCRGLVSNDENNQAISQDAFDVLYYIVQKRLKAGKLTVIDATNVQPEDRKKYIQLAREYHVFPIAIVLNLPEEICHQRNSQRPDRQFGIHVVRRHTQALRRSLRGLEKEGFRYVYVLNSLTEINQVEIHRQPLWNNLKHEHGPFDIIGDIHGCCDELETLLTQLGYQPTDPSHPGNTGVNLGIWDFPTYSHPQGRKAVFLGDLVDRGPRILDTVKLVRNMVVAGSGICVPGNHENKLLRKLRGKNVRVSHGLAQTLEEIEGIPEPERETAIKALIEFLDSLVSHYVLDNGNLVVAHAGMKQEMQGRGSGAVREFALYGETTGEIDEFGFPVRFNWASEYRGEALVVYGHTPVPEAEWLNNTIDIDTGCVFGGKLTALRYPERELVAIAAKRVYCEPLKPLQGIGHHSRTVQQELDDVLQIEDVCGKRFIQTRLQTNIKIREENSIAALEVMGRFAANPKWLIYLPPTMSPVETSQLPGYLEHPQQAFSYYQSQGVQEVVCEEKHMGSRTVVIVCRDLEAANKRFGVVDEGIGICYTRTGRRFFDNRELEQQLLNQLSTTLSDIQFWQRFATDWVCFDCELMPWSAKAQGLLTRQYAPVGMSSRLALGTAVDLLTKTQERGVDVSPLLEKFQRRSQAANLYVQAYRRYCWNVQDITDIKLAPFHILATEGATHMDKTHLWHLQEIANIAHAHPDLLLTTEYKIVNLNDPHSQAAGINWWQQLVDAGGEGMVVKPMDFICVGDRGVIQPAVKCRGQEYLRIIYGAEYDLPCHLNRLRQRGLSHKRSLAMREFALGVEALERFVKGVPLRRVHECVFGILALESEPVDPRL
>NZ_AP018254.1|WP_096625315.1|5650913_5652308_-|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1
MLLTISTTHQPATDLGYLLHKHPDKCQSFPLAFGTAHVFYPEASMEYCTAALLLDIDPIKLVRGRSTNLEQYVNDRPYVASSFLSVAMSQVFGTALGGRCKDRPELVQASIPLVAKLSVIPCRGGEKFFQELFLPLGYAIAIENHQLDEKFPEWGNSRYYSVELRHTLPLVDLLSHLYVLIPVLDDDKHYWVGEDEITKLLHHGEGWLSTHPAKAEITRRYLKRKGSLTRQALAQLAEVDQPDPDGMEAEAAEVEAAVEKPLSLNKQRMLAVVDALKQYGCQKVIDLGCGEGTLLRYLIRDTFFAKVTGMDVSYRALTIAQERIEKLHLPRQQWEKISIFQGSLTYQDARFKGYDAVTLIEVIEHLDLPRLTTLEKIIFGFVQPSCVIVTTPNIEYNVKFERLATGKFRHPDHRFEWTRSEFQSWANKLASKYGYNVNLTGIGETGIQVGSPTQMAIFHHLTGK
>NZ_AP018254.1|WP_096625317.1|5652536_5653769_+|glycoside-hydrolase-family-10-protein
MIQIFRGWWGFYRRYQRGWFAGLMAVTMAFVVWSPAFSRTPPVDVNTELRGVWLTNVDSNVLFETQRLDNALERLQDLHFNIVYPTVWNWGWTLYPSQIAKNVIGREVDPEPGLQGRDMLQEAIAGGHKRGLKVIPWFEFGFMAPADSELAKRRPQWLTSRRDGTKIWKEGIHDRVWLNPFRPDVQKFIQDLIVEIVSKYDVDGIQFDDHFGLPAELGYDPYTVRLYKLEHRGKEPPKNPQDQEWLRWRANKITQFMRQVFFAIKAAKKDCIVSVAPNPQRFSYDYYLADWQRWERMGLIEDLVLQIYRDDMKVFTSELDRPEVKAARKHIPVSIGIITGLKAKFVPMERVAQQVKETRDRKFAGVSFFFYETLWNLVQEPPQTRVSRLKNIFPTPTQYPNLLAGWKPRS
>NZ_AP018254.1|WP_096625319.1|5653815_5654139_-|divalent-cation-tolerance-protein-CutA
MAQSHQYGVALVTTSSESEAEAIASALVESGLAACVNLFPIRSIYTWQGQVQQEREWQLLIKTDLQKFDQLTAKVKELHSYEVPEIIALPIVAGSDDYLGWLGSSVG
>NZ_AP018254.1|WP_096625321.1|5654195_5655209_-|transposase
MRKLTEVDKKEILKLYRETMETTSTLAQKYEVSNSTISRLLKSTLAEEEYEYLVSLKRAARTPEGRAQVSYSNLPVFTPDADGQPITSVSTTKVENVTEPDWGEGEITKPKSKPKPVTKSKPTPVTRHRHSVADDLLEAQQEQELIAEQLELLPPEPKRIVDLEPIVSPLVKDIQQENISLAEMFGDDGLVLGDEMDDLDDLDEDLDDEEDLDDEDVWEPPKPLVTRRGGDSSVRVLPLSAANLPRTCYLVIDRAAELITRPLRDFGDLGQIPNPEIQQRTLPVFDNHRVAKRFSSKRDRVIKVPDSRMLHKARYHLQAKGITRLLIDGQIYSLSVQ
>NZ_AP018254.1|WP_096625323.1|5655231_5656113_-|hypothetical-protein
MSSTYNQVERTKQLFSTQNIILASIAWGVLSVLYFLLFSAPVPDENGELIRPAWYILGTNIFEAIAYLGAGILCLRNWRSRQIISGRNIWLAMGIGMLSYCVGGIFFGYTELVLKQEPFPSIGDIFFVITYIFVGASMITAVASRRINLEAWQWIVVVAIGAFASALAWLISNQPPGVENQVEPWAQDIAPLLNWFYIVSDVFLLIIATSLLLAFWGGRISLSWRMIAFAAFSLYIADMWQKYATTWIKNYQSGEILEVFWVLSGVLFGMGAVLEYDASLSRSRHLTRGRKRT
>NZ_AP018254.1|WP_096626546.1|5656266_5656926_-|hypothetical-protein
MFILKRQDVEISSILHPKREQQVPVLHYQGQTFRLISVFKASQEEEAKALWRDLTDNRGKACVLLEEAERFSVWGKIRLDNSESEDNQETSPVLLIQAAIMLLQSVYLDIEEFLGVRQAAMFEKDMVETCRQKQYPQTSTPDAIRYLLNVNPLQGNQLPRWNQEHVISFLSELHRLGKIYFGNTSFASPVVDRLVEMAEGDRSVFISWLNQSPLSQIWS
>NZ_AP018254.1|WP_096625325.1|5657512_5657917_+|hypothetical-protein
MVRLMMCVVLGLILSACTVSALAPPRGLIEKAVVWQFQQTQTQLEQQLGLDIKNVDIKNIAIAQQHPLSIENLPAFRIQGSYDVILKLPKRQLSQPHRDFDVYMQLQREGKTWRVLQPNPNDSNPSSWQSFMIE
>NZ_AP018254.1|WP_096625327.1|5658088_5658445_+|dihydroneopterin-aldolase
MDCIYVQGIRAYGYTGYLPEEQVLGQWFEVDVRLWLDVSKAGESDAIEDTLDYRSVIYLVKEIIKTSKFALIEKLITVIADTILQKCDRVTQVHVVLTKPAAPIPDFEGKISLEVTRP
>NZ_AP018254.1|WP_096625329.1|5658639_5660175_+|phenylacetate--CoA-ligase-family-protein
MHSKPELTLNALTNFFHTPLDSLLNIPPEADNNGVLNLFRQVATTVPAYQDFIRKHGIHPQQIQTLADFPTLPPVTKENYIQHYQISELCRNGAIANCDLVAVSSGSTGKPTCWPRFISDEVAIAIRFEQIFHDCFFADSRSTLAVICFTLGTWVGGIYSANCCRYLAMKGYPITVVTPGNNLEEILRVVQELGSHFDQVVLLGYPPFLKDVIDRGLARGVSWSQYHPKLVTAGEVFSEEWRSLVLERVGSHSPCYDLASLYGTADAGVLGNETPLSITIRRFLANHPDIARELFGESRLPTLVQYQPTQRFFEVNAGRLLFSGDNGIPLIRYDILDTGGIITYEQMLTFLHHHNFDPIADLAANQGVNIAQCRGIRQLPFVYVFGRSNFAVSFFGANIYPENIAVGLEQEGIREWVTGKFVLQVVTDRDQNRFLSVVVELAPNHNLADIQQDSGKVNRIAASILSQLKRLNSEFANYVPQEYQHPVITLKSHGDQEYFPIGVKHRYTRNM

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Crispr_ID: NZ_AP018254_50

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP018254_50

5665988-5666072

Orphan

Consensus_repeat	Method
TGGAATGACGGATTAATTTTCCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP018254_50

>merge|NZ_AP018254|50|5665988-5666072|CRISPRCasFinder
TGGAATGACGGATTAATTTTCCTTTTAATCCCTACTTCCTATAGGTTTTAAATTAGAAGTCTGGAATGAAGGATTAATTTTCCTT

>NZ_AP018254|50|48|5665988-5666072|CRISPRCasFinder
TGGAATGACGGATTAATTTTCCTT	TTAATCCCTACTTCCTATAGGTTTTAAATTAGAAGTC
TGGAATGAAGGATTAATTTTCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP018254.1\|WP_096625341.1\|5668213_5668600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625347.1\|5676187_5677468_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853
NZ_AP018254.1\|WP_096625325.1\|5657512_5657917_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625351.1\|5679066_5681730_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226654
NZ_AP018254.1\|WP_096625349.1\|5677493_5678930_-\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096625327.1\|5658088_5658445_+\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737
NZ_AP018254.1\|WP_096626546.1\|5656266_5656926_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625335.1\|5662230_5662497_+\|XisI-protein	unknown	unknown	gnl\|CDD\|370165
NZ_AP018254.1\|WP_096625353.1\|5682294_5684028_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_AP018254.1\|WP_096625323.1\|5655231_5656113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP018254.1\|WP_096625331.1\|5660246_5661605_+\|16S-rRNA-(cytosine(967)-C(5))-methyltransferase	unknown	unknown	gnl\|CDD\|237856
NZ_AP018254.1\|WP_096625345.1\|5674142_5675633_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235998
NZ_AP018254.1\|WP_096626548.1\|5662621_5662834_+\|UPF0175-family-protein	unknown	unknown	gnl\|CDD\|225440
NZ_AP018254.1\|WP_096625355.1\|5684137_5685223_-\|lipolytic-protein-G-D-S-L-family	unknown	unknown	gnl\|CDD\|238866
NZ_AP018254.1\|WP_096625337.1\|5663381_5665922_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_AP018254.1\|WP_096625333.1\|5661663_5662077_+\|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl\|CDD\|143581
NZ_AP018254.1\|WP_096625329.1\|5658639_5660175_+\|phenylacetate--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|224458
NZ_AP018254.1\|WP_157780821.1\|5672415_5673579_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236545
NZ_AP018254.1\|WP_096625339.1\|5666205_5667681_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_AP018254.1\|WP_096626550.1\|5669030_5671190_-\|ATP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226481

Protein	Function_ID	Function_description	E-value
NZ_AP018254.1\|WP_096626550.1\|5669030_5671190_-\|ATP-binding-domain-containing-protein	gnl\|CDD\|226481	COG3972, COG3972, Superfamily I DNA and RNA helicases [General function prediction only].	3.40479e-63
NZ_AP018254.1\|WP_096625347.1\|5676187_5677468_+\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0
NZ_AP018254.1\|WP_096625351.1\|5679066_5681730_-\|PAS-domain-S-box-protein	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	6.49283e-52
NZ_AP018254.1\|WP_096625349.1\|5677493_5678930_-\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.1231e-45
NZ_AP018254.1\|WP_096625327.1\|5658088_5658445_+\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	4.84629e-40
NZ_AP018254.1\|WP_096625335.1\|5662230_5662497_+\|XisI-protein	gnl\|CDD\|370165	pfam08869, XisI, XisI protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.24088e-08
NZ_AP018254.1\|WP_096625353.1\|5682294_5684028_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.58401e-81
NZ_AP018254.1\|WP_096625331.1\|5660246_5661605_+\|16S-rRNA-(cytosine(967)-C(5))-methyltransferase	gnl\|CDD\|237856	PRK14901, PRK14901, 16S rRNA methyltransferase B; Provisional.	0
NZ_AP018254.1\|WP_096625345.1\|5674142_5675633_+\|amidophosphoribosyltransferase	gnl\|CDD\|235998	PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.	0
NZ_AP018254.1\|WP_096626548.1\|5662621_5662834_+\|UPF0175-family-protein	gnl\|CDD\|225440	COG2886, COG2886, Uncharacterized small protein [Function unknown].	2.25886e-10
NZ_AP018254.1\|WP_096625355.1\|5684137_5685223_-\|lipolytic-protein-G-D-S-L-family	gnl\|CDD\|238866	cd01828, sialate_O-acetylesterase_like2, sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	8.30352e-62
NZ_AP018254.1\|WP_096625337.1\|5663381_5665922_-\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.8695e-46
NZ_AP018254.1\|WP_096625333.1\|5661663_5662077_+\|TerB-family-tellurite-resistance-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	2.9316e-10
NZ_AP018254.1\|WP_096625329.1\|5658639_5660175_+\|phenylacetate--CoA-ligase-family-protein	gnl\|CDD\|224458	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism].	1.39551e-61
NZ_AP018254.1\|WP_157780821.1\|5672415_5673579_-\|hypothetical-protein	gnl\|CDD\|236545	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional.	1.72354e-14
NZ_AP018254.1\|WP_096625339.1\|5666205_5667681_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0

>NZ_AP018254.1|WP_096625337.1|5663381_5665922_-|PAS-domain-containing-protein
MDFGNIQALMQTPLGQVVEKNSQVFWVYAGDFSQILYLGTNAPQIWGLSQENLYQSPQSLLQFIHPDDREQVQKGWQNLLADQAFDQEYRIVLPDQNIRWIRDRGYGIVDPHTQEKYFAGLAEDISDRKAIELALSESEHKFQLFANNADIVFWVCEPDVSKFHYISPGYEKIWGRGCEEIYADSRSFLESVHPDDLAEVIQAAVGENACHMNQDYRIIRADGSVRWINDRTFPVYDANGNIYRMVGLAEDITERKQAEQTISEIQIERLTHQIIQAIRTSLDLNTIFNIAVNEIGQLLNIDHVKISEFVSEEKGWLTVAEYRSHPQIPESLGTYIPDRGNPGTAILKKLEIFRIDDTNECEDEVTKQIAQTFPGAWLIIPLHYDSAVWGSLCLLIDGRPRHWQDKEIELMQNIAGQISIAVQQSKLYQRTRYQVQREQVFNQVIQAIHNTLDLPTIFHTAVREIAQFLQVDRAEIAQYLPSEDAWLIVADYSLRPELPSSMGLQIPGAGNPISDQLKQSQIVRIADTRVLTDEVNKAIAEIFSGAWLLVPITISQGTQVWGSITLSIEGVTHEWSQEEVELTSAIIRQLAIAIEKSHLHQQVKQLAEAEVYKALQRERELNEAKSKFIANTSHEIRTPLATIQSSLDMLQHYADKLTPEKKQAHFQKIETAIKRTSQIVQDTLLISEVEANALQVKRSDTNIIQLCQAIVDEITCDRDARQRIQIVATPENISAFIDPNLTQHILTNLLQNALKYSEQNTTIQLLISSNSESITFVVSNQGMGIPPHNLPHIFDSFYRADNVGNIGGTGLGLAIVKQCVDLQDGHITVESKVGENTTFTVTLPKM
>NZ_AP018254.1|WP_096626548.1|5662621_5662834_+|UPF0175-family-protein
MQIILNLPDSLSQTETFNQNDWLREIAIALFQQERISLSRASKITGMEIMDFLGCVSIHLRDRYSIILAA
>NZ_AP018254.1|WP_096625335.1|5662230_5662497_+|XisI-protein
MQNVGCCIIYADILKKTVQEAVVNQPRLQAIQLYPVCDNESGHFLVLATGWDKQRIFCHTLYAPIVRNMNYEKFKDKGQAIMKAAYTL
>NZ_AP018254.1|WP_096625333.1|5661663_5662077_+|TerB-family-tellurite-resistance-protein
MVSKAGVKNLVKILIGAAWIDGKIQPEERQYLREIANAKGIADDPDIKPWLYELVPVKPEECYLWVQEYLGDNPTPEECQNLVQAISGLIYSDGEVATEEAKLLNKLQSFAEADESQLNSILKQIQKLYRRWVDIQF
>NZ_AP018254.1|WP_096625331.1|5660246_5661605_+|16S-rRNA-(cytosine(967)-C(5))-methyltransferase
MLSSRQIAFLTLRDVHNGAYVDVALDRILQKFPLPDTDRRLVTELVYGCTRRQRTLDAILNQIGKKNAQSQPKDLRTILHLGLYQLRYQQKIPPSAAVNTTVELAKTNKFAGLTGVVNGILRQYLRIQSAKDENIDSLILPNTEASQLGILHSFPDWIIEVWLEQFGYTETAALSAWMNQTPNLDLRINPLRTSRQAVETAFTNAGINFIPLANLDNGLRITNYRAPIQTLPGFEQGWWTVQDASAQLVGYLLNPQPGEIIIDACAAPGGKTTQIAELMGDQGQIFAIDDTPSRINKLKQNILRSQLQSIQVHTGDSRHLPQFYQTADRVLLDAPCSGLGTLHRHPDARWRQTPEKVQQLTQLQTELLNHTSTWVKPGGILVYATCTLHKSENEHIIQSFLQLHPDWKIAPPPPNSPLHTYTTPPGWLKVLPHHHNMDGFFMVRLKKTNDSP
>NZ_AP018254.1|WP_096625329.1|5658639_5660175_+|phenylacetate--CoA-ligase-family-protein
MHSKPELTLNALTNFFHTPLDSLLNIPPEADNNGVLNLFRQVATTVPAYQDFIRKHGIHPQQIQTLADFPTLPPVTKENYIQHYQISELCRNGAIANCDLVAVSSGSTGKPTCWPRFISDEVAIAIRFEQIFHDCFFADSRSTLAVICFTLGTWVGGIYSANCCRYLAMKGYPITVVTPGNNLEEILRVVQELGSHFDQVVLLGYPPFLKDVIDRGLARGVSWSQYHPKLVTAGEVFSEEWRSLVLERVGSHSPCYDLASLYGTADAGVLGNETPLSITIRRFLANHPDIARELFGESRLPTLVQYQPTQRFFEVNAGRLLFSGDNGIPLIRYDILDTGGIITYEQMLTFLHHHNFDPIADLAANQGVNIAQCRGIRQLPFVYVFGRSNFAVSFFGANIYPENIAVGLEQEGIREWVTGKFVLQVVTDRDQNRFLSVVVELAPNHNLADIQQDSGKVNRIAASILSQLKRLNSEFANYVPQEYQHPVITLKSHGDQEYFPIGVKHRYTRNM
>NZ_AP018254.1|WP_096625327.1|5658088_5658445_+|dihydroneopterin-aldolase
MDCIYVQGIRAYGYTGYLPEEQVLGQWFEVDVRLWLDVSKAGESDAIEDTLDYRSVIYLVKEIIKTSKFALIEKLITVIADTILQKCDRVTQVHVVLTKPAAPIPDFEGKISLEVTRP
>NZ_AP018254.1|WP_096625325.1|5657512_5657917_+|hypothetical-protein
MVRLMMCVVLGLILSACTVSALAPPRGLIEKAVVWQFQQTQTQLEQQLGLDIKNVDIKNIAIAQQHPLSIENLPAFRIQGSYDVILKLPKRQLSQPHRDFDVYMQLQREGKTWRVLQPNPNDSNPSSWQSFMIE
>NZ_AP018254.1|WP_096626546.1|5656266_5656926_-|hypothetical-protein
MFILKRQDVEISSILHPKREQQVPVLHYQGQTFRLISVFKASQEEEAKALWRDLTDNRGKACVLLEEAERFSVWGKIRLDNSESEDNQETSPVLLIQAAIMLLQSVYLDIEEFLGVRQAAMFEKDMVETCRQKQYPQTSTPDAIRYLLNVNPLQGNQLPRWNQEHVISFLSELHRLGKIYFGNTSFASPVVDRLVEMAEGDRSVFISWLNQSPLSQIWS
>NZ_AP018254.1|WP_096625323.1|5655231_5656113_-|hypothetical-protein
MSSTYNQVERTKQLFSTQNIILASIAWGVLSVLYFLLFSAPVPDENGELIRPAWYILGTNIFEAIAYLGAGILCLRNWRSRQIISGRNIWLAMGIGMLSYCVGGIFFGYTELVLKQEPFPSIGDIFFVITYIFVGASMITAVASRRINLEAWQWIVVVAIGAFASALAWLISNQPPGVENQVEPWAQDIAPLLNWFYIVSDVFLLIIATSLLLAFWGGRISLSWRMIAFAAFSLYIADMWQKYATTWIKNYQSGEILEVFWVLSGVLFGMGAVLEYDASLSRSRHLTRGRKRT
>NZ_AP018254.1|WP_096625339.1|5666205_5667681_-|leucyl-aminopeptidase
MEIRPSNVPLSEWTGDGLAIGLFEDSVELTGDLAVLDQRLAGVIPEIIAEEEFKGKLGSVVATRVGGSTPVRKLLLVGLGKAEALKFDTLRRAAASLARLAKKQKCKSLAVNLPVCDGDAATSTQAIAEGIELALYQDTRFKSESEEKNFQVETVDLLGFPGQEGAITKAKQICAGVNLARELVAAPANAVTPITMAEVAQNIASEHGLDAEILEREDCEKLGMGAFLGVAQASDLPPKFIHLTYKPPGVPRKKLAIVGKGLTFDSGGLNLKGAGSGIETMKIDMGGAAATLGAAKTIGLMKPDVEVHFISAVTENMISGHAMHPGDILTASNGKTIEVNNTDAEGRLTLADALVFADKLGVEAIVDLATLTGACIIALGDDIAALFTSNDDLAQQLETASIAGGEKIWRMPMEEKYFDGLKSGIADMKNTGPRAGGSITAALFLKQFVKDTPAWAHLDIAGPVWTDKENGVNNSGATGFGVRTLVNWVLS
>NZ_AP018254.1|WP_096625341.1|5668213_5668600_+|hypothetical-protein
MSELSNLQLTIDFDDPNWDEQQKAEIIRNLQQEMREMEGFVAESEDVELKRTIRPQAIGSFLTGILMAEVNPANIKRLLSFLSERLGNKAIKLRLKTPDGRELEVEASSKEEFEYIIAQAERFINQQA
>NZ_AP018254.1|WP_096626550.1|5669030_5671190_-|ATP-binding-domain-containing-protein
MAAGQEAREGNFIVTEALTEQEQNIWKAIKNAFANSECIGYWRYPIFAKVGEKYQEPDILIICQSLGLIVMNILSVNLEQIVTINQENWQLQNFPQVEVNPVAVAETQVRALIAYTDREASIWRKLTGRALILLPQITRTQFQESGLMMLDNLIFQDDLQPDLLLNKITAIAPTIPGEALEHKDWQLVYAVISGTSILRQHRHEVKVSGKSRSSVMNALGDRLHEIDLQQEHVGKEIPPGMQRIRGIAGSGKTVVLCQKAAHMHLKHPEWDIAVVFFTRSLYEQIISLVDRWLRRFSGGEVGYDPSSNQKLKILHAWGAKEQPGLYSYICQHHGVRPGNVKDAKEKQPQLGLAQHCQKLLTQTPIQPLFDAILIDEGQDLVVDGDGKYGDKQSIYWLAYQALRPVNQENPQERRLIWCYDEAQSLDNLVIPTTKEIFGAELAEVFRQQPQYPGGIYRSQVLRKCYRTPGPILTAAHALGMGLLRPQGMLSGITNKRDWENLGYEVTGDFRRLGEAITIHRPAKYSPNPLPQMWGEPVIEFFAYPTREEELSQLADKIMHCIVNDGLQPSRDILVLVLGNPQEAKELEIQTAEFLMKQGIDIYIPTAPKNNLTTFTWPDARPNQFWYPESVTISRIPRAKGNEANMVFVIGFDHIARDEANVTLRNQVFIALTRSRGWANLSGVGNYPMYTEIAQVLASGDRFTFNYQRPLKRDISDGEE
>NZ_AP018254.1|WP_157780821.1|5672415_5673579_-|hypothetical-protein
MWSSTVFASRTLPSIFTMMRSLDKQQPLPTPGKHREPPSLWLFAIAVSTGLHSLLLWFLFESQFTLITKQADNSFTPIEIIEIPPSPQTSPDKPKPAPQTKLPPETTTPETNTNPDTDGEIELRKLNDAIALQQKQQLEQQRQQQLAQQRQRELEQQRQRELEQQRQQQIAQQQRQRELEQQRQQQLAQQRQQQLEQQQQRELEQQRQQQLAQQRQQQLEQQQQRELEEKRRAEEATRNLEEIKRGGIVDVDKDPIKPTPGDSGNVGGLVAINISVFSKPEQDQRVKRDLPHIYARPQGNLPNTLPMVDGYAIAQRVECEVLLIIDDKGKITSILADLSNPQRNLCQKYSEAFFENATFEPAQDESGNKPPLSQLYVKIVIEPNPPN
>NZ_AP018254.1|WP_096625345.1|5674142_5675633_+|amidophosphoribosyltransferase
MIPIHPLSADSQQLQHHTHEQERPDKPEEACGVFGVYAPEEDVAKLTYFGLYALQHRGQESAGIATFCGETVHLHKDMGLVSQVFSESILQQLPGTIAVGHTRYSTTGSSRKANAQPAVVDTRLGKIALAHNGNLVNTIELREALLKNNCNLETTTDSEMIALAIAEAVNSGDNWLEGAIAAFNRCSGAYSLVVGTPVGMMGVRDPNGIRPLVIGTLGENPVRYVLASETCGLDIIGAEYLRDVEPGELVWITEEGLASYHWSRKPEPKLCIFEMIYFARPDSVVNNETLYSYRMRLGRRLAQESFVDADIVFGVPDSGIPAAIGFSQASGIMFAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLQGKRVIIVDDSIVRGTTSRKLVKALRDAGAIEVHMRISSPPVTHPCFYGIDTDTQDQLIAARMSVEEISQQLGVDTLAYLSWEGMLEETHEDTNNFCSACFTGNYPVAVPEPLKRKKLVLEKVTA
>NZ_AP018254.1|WP_096625347.1|5676187_5677468_+|histidinol-dehydrogenase
MQILKTTDANFHTLFDSLVNDRREATVDVSGTVREIIADVRSRGDVAVREYTAKFDKFEPDSLRISKQAIASSAAACETGVIEALKLAASRIAEFHRRQIPSDINYNDATGVNLGLTWVPLANVGIYVPGGRASYPSSVLMNAIPAKIAGVERIVMTVPMPRGEINPAVLAAAEIAGVKEIYGIGGAQAIAALAYGTEAIAPVDKIVGPGNAYVAEAKRQVFGTVGIDSIAGPSEILVVADGKNNPDWIAWDLLSQAEHDPVAQSILITDSSEFAEQVVVAIERILTTLPTQEVARASWENYGAIIITSNLEEGIPLLNRLAPEHLELCVDHPEEMAKQIRCAGSMFLGRYTPEAIGDYVGGPNHVLPTSRSARFASGLSAFDFLKRITYLQCDESALHKIGHAAISLANAEGLAAHAGSVAVRIG
>NZ_AP018254.1|WP_096625349.1|5677493_5678930_-|PAS-domain-containing-sensor-histidine-kinase
MENQSKESSEYNDAYLEASNLPHQALVSAIIVDYLPQYIFWRDANQRLLGCNRAFANFFGFEDCQPLLGKTAAEILEICQSNHAYAAILLDADFSLVTEIAQGEYTSDREIIQTNKPAYYILAISGVDPSVLSYFEFRKYPFQHPSTNTTGVITWVEDVSDRQRLEVDAKANSQQLQSALKQLQDTQTLLLQSEKMSTLGQLVAGVAHEINNPVNFIYGNLDHADTYIQDLLQIVQLYQALLTETPPEIRELANLIDLDFIMHDLPKLLASIKVGAQRIKEIVLSLRTFSRMDEDQMKAVNIHEGIDSTLMILEHRLKPSNQHSGIQIIKNYGELPLIECYAGQLNQVFMNLISNAIDALEESLEKPIFPGEEKTFNKSNIPEPLRIKITTELVNQKQVQIKIADNGTGIPSHIQNKLFDPFFTTKPIGKGTGMGLSISYKIITERHHGSIECVSRIGEGTEFIITIPVRQSSTSRQK
>NZ_AP018254.1|WP_096625351.1|5679066_5681730_-|PAS-domain-S-box-protein
MTNPLSSDCFQDSLEKLNLSTNFWLNLFNGIADGIFVKHRQHGWIFVNEAFAHLLGRDRLELVGRCELDFLLPEEASFFQEADEEVFFTGKIRESHGFVTDGQGIRRFITTKRSLFVDENGNRLVVGVVRDVTQSVIEYQQAEAEFIESKQLLQLVIDNIPQMICWKDCNSVFLGCNQAFAKAAGLEHPREIVGKTDYDLAWQKQESDWYRECDRQVISSGLPRLHLVETQHQASGQKVWLDTSKIPLVDRTGNIVGLLAFIEDITQQQINQQYVDVQNAVMQILATTATIEAAAPQIIQVICHSLDWQFGEFWSVDPQTQYLSCLSTWHSLEQQVVDCVERVKKLIFAPGLMLAKIVLSQHITIFETKENTVNQEILDLLEFNNIGEVCSMLAFPIIHGAEIIGVMTLFSFHQQHTTPNFINVFNLIGKILGQFVARKHAENALAASEAKLQKLADSAPGMLYQFQLYPDGVMSFPYVSSGCQEIFGLTPRQIQENPNIINDYVHPDYQQECFDAIIQSAQTLNPWKAQLLIVLPHGEKKWLQGISRPEKLADGSVLWHGIVIDITRLKATEVALQSAYGQMEVLVLERTKELAKSNEQLHLRTQELETALDKLQRTQIQLIQSEKMSSLGQLVAGIAHEINNPINFIYANICYVEEYVNNLLFMTQLYQQYFPIANPVIQEFAESIEFEYIKTDLPKIFASIKNGSERIRQIVLSLRSFSRLDEAKIKPVDIHEGINSTLMILQSRLYEDQDSPIQVIKKYGDLPLVECYAGKINQVFMNIISNAIDALQPKKDNKQITIVTERNTTSILIKIRDNGIGIPEKARSRIFDPFFTTKPVGKGTGLGLSISYQIIVELHQGKLECFSQVGQGTEFHIHIPIKFTNLP
>NZ_AP018254.1|WP_096625353.1|5682294_5684028_+|serine/threonine-protein-kinase
MVAAGTTLQGGKYSLDREIGRGGFGITFQATHHYLNHIVVIKTLNEKLRQHPDFPKFERQFQDEARRLATCIHPHIVRISDFFVEAGLPYMVMEYIPGETLGEAYVMAGIPLPEAVATHYIRQIGAALEVVHQNGLLHRDIKPDNIILRRGTQEVVLIDFGIAREFNSGARQTHTGLVSEGYSPIEQYLSSAPRTPATDVYGLAATLYTLLTAQVPMPALLRDREKMPSPKELQPQLSAAVNQAVMRGMAIEAKHRPPTVQEWLKMLPPPAPIPEPARIPTYAVPTIDLSVQQPPPVPVVNPQPQLPVHPTTQPPAAKVTNSPGMDKGVGRWKGSWQKISDRLLRPQTFIATGVAMLAASAGFSVVRMMSPTSTPVNTQNTQPVFEQPTDTSSETVEAVETPDSQPTDSSSEEKTTTPVTNRTRRSRISSESAPTNSRIRRQRFQNTSSTTNNNSRSRRQVDNSSEDNNGTRQESTANQNTPSKGASQLSGTNSRSVSSPPQPQQSPSPSLVERIRKIRDTRNSQSPASAPKNSPPTSGADKPVTPVPDAPKNKDVVVPTQEVQSNNNASEQVIPTE
>NZ_AP018254.1|WP_096625355.1|5684137_5685223_-|lipolytic-protein-G-D-S-L-family
MRDAYLLAAGVLTGMAVPTSTLPGLSLLPQLESPGNSGQQQAQISTSVDIPSSIVPESSTPEFSLPFQPDSTPARLLRNYNYDTSYGNQRSHFRQPASGYELYQQRLMALRNGQIYTRIGEGVGDFAQKANTRQLTYEDWKKLLALEAKAIADGQGNNRLSVMVGDSLSLWFPTHKLPSGKLWLNQGISGDTSGGILKRLAYFDKTRPEAIYVMAGVNDLRRGHSDAVILQNIKSIVQRLRKTHPQAQIIVKSILPTRLPTIPNHRIRGINQQIAKIAEAENASYLNIHAWFVDFEGNLRPELTTDGLHLSHNGYEVWQAAIQQVETRIATSQIEQKRRKLLKEQAETVMRKSQVGNQARM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP018254_7	7.1\|767811\|47\|NZ_AP018254\|CRISPRCasFinder	767811-767857	47	NZ_AP018254.1	767895-767941	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	82578-82603	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	547866-547891	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	702787-702812	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1342221-1342246	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1497356-1497381	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1519014-1519039	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1566603-1566628	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2534192-2534217	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2856290-2856315	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3102481-3102506	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3476208-3476233	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	4117261-4117286	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	4587859-4587884	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5308056-5308081	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5381576-5381601	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5605425-5605450	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5612730-5612755	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	971285-971310	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1116867-1116892	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1339147-1339172	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1510456-1510481	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1761128-1761153	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1761187-1761212	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1811349-1811374	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1955590-1955615	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2279141-2279166	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2343084-2343109	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2574421-2574446	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2781079-2781104	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3650411-3650436	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3662417-3662442	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3812131-3812156	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	4775010-4775035	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5236123-5236148	0	1.0
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5819416-5819441	0	1.0
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	4587846-4587883	0	1.0
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	5605412-5605449	0	1.0
NZ_AP018254_3	3.1\|272533\|36\|NZ_AP018254\|CRISPRCasFinder	272533-272568	36	NZ_AP018254.1	272463-272498	1	0.972
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1038142-1038167	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1111261-1111286	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1937592-1937617	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3988568-3988593	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	4414279-4414304	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	4431752-4431777	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	157583-157608	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	441980-442005	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1116966-1116991	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1148354-1148379	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2263710-2263735	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	2595560-2595585	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3811978-3812003	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3883431-3883456	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3941675-3941700	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5042748-5042773	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5447728-5447753	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5447951-5447976	1	0.962
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5976659-5976684	1	0.962
NZ_AP018254_31	31.2\|2696970\|48\|NZ_AP018254\|PILER-CR	2696970-2697017	48	NZ_AP018254.1	2534176-2534223	1	0.979
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	971286-971323	1	0.974
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	1148355-1148392	1	0.974
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	1955591-1955628	1	0.974
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	2343085-2343122	1	0.974
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	3883432-3883469	1	0.974
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	3941676-3941713	1	0.974
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	1497343-1497380	1	0.974
NZ_AP018254_27	27.1\|2496312\|33\|NZ_AP018254\|CRISPRCasFinder	2496312-2496344	33	NZ_AP018254.1	547857-547889	2	0.939
NZ_AP018254_27	27.1\|2496312\|33\|NZ_AP018254\|CRISPRCasFinder	2496312-2496344	33	NZ_AP018254.1	1761130-1761162	2	0.939
NZ_AP018254_27	27.1\|2496312\|33\|NZ_AP018254\|CRISPRCasFinder	2496312-2496344	33	NZ_AP018254.1	2534183-2534215	2	0.939
NZ_AP018254_27	27.1\|2496312\|33\|NZ_AP018254\|CRISPRCasFinder	2496312-2496344	33	NZ_AP018254.1	3476199-3476231	2	0.939
NZ_AP018254_27	27.1\|2496312\|33\|NZ_AP018254\|CRISPRCasFinder	2496312-2496344	33	NZ_AP018254.1	5236125-5236157	2	0.939
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1639570-1639595	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3322914-3322939	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3382166-3382191	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5585174-5585199	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	1835231-1835256	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	3986302-3986327	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5668982-5669007	2	0.923
NZ_AP018254_29	29.1\|2605782\|26\|NZ_AP018254\|CRISPRCasFinder	2605782-2605807	26	NZ_AP018254.1	5694078-5694103	2	0.923
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	1622990-1623027	2	0.947
NZ_AP018254_37	37.1\|3768336\|38\|NZ_AP018254\|CRISPRCasFinder	3768336-3768373	38	NZ_AP018254.1	2043176-2043213	2	0.947

1. spacer 7.1|767811|47|NZ_AP018254|CRISPRCasFinder matches to position: 767895-767941, mismatch: 0, identity: 1.0

aattttcaactcccaacactgctggagtaaacaaacaatttcccaac	CRISPR spacer
aattttcaactcccaacactgctggagtaaacaaacaatttcccaac	Protospacer
***********************************************

2. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 82578-82603, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

3. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 547866-547891, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

4. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 702787-702812, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

5. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1342221-1342246, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

6. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1497356-1497381, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

7. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1519014-1519039, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

8. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1566603-1566628, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

9. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2534192-2534217, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

10. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2856290-2856315, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

11. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3102481-3102506, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

12. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3476208-3476233, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

13. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 4117261-4117286, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

14. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 4587859-4587884, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

15. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5308056-5308081, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

16. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5381576-5381601, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

17. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5605425-5605450, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

18. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5612730-5612755, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

19. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 971285-971310, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

20. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1116867-1116892, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

21. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1339147-1339172, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

22. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1510456-1510481, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

23. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1761128-1761153, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

24. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1761187-1761212, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

25. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1811349-1811374, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

26. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1955590-1955615, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

27. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2279141-2279166, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

28. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2343084-2343109, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

29. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2574421-2574446, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

30. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2781079-2781104, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

31. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3650411-3650436, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

32. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3662417-3662442, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

33. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3812131-3812156, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

34. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 4775010-4775035, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

35. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5236123-5236148, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

36. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5819416-5819441, mismatch: 0, identity: 1.0

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagctacg	Protospacer
**************************

37. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 4587846-4587883, mismatch: 0, identity: 1.0

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcgggtattacaaattaca	Protospacer
**************************************

38. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 5605412-5605449, mismatch: 0, identity: 1.0

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcgggtattacaaattaca	Protospacer
**************************************

39. spacer 3.1|272533|36|NZ_AP018254|CRISPRCasFinder matches to position: 272463-272498, mismatch: 1, identity: 0.972

aaatattccctaccccctactccccattccctacct	CRISPR spacer
aaatattccctactccctactccccattccctacct	Protospacer
*************.**********************

40. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1038142-1038167, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acctgctacgcgggaagcaagctacg	Protospacer
***.**********************

41. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1111261-1111286, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaggctacg	Protospacer
*******************.******

42. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1937592-1937617, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcaagttacg	Protospacer
*********************.****

43. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3988568-3988593, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaaacaagctacg	Protospacer
****************.*********

44. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 4414279-4414304, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
actcgctacgcgggaagcaagctacg	Protospacer
**.***********************

45. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 4431752-4431777, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcgagctacg	Protospacer
******************.*******

46. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 157583-157608, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagctagctacg	Protospacer
****************** *******

47. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 441980-442005, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
accccctacgcgggaagcaagctacg	Protospacer
**** *********************

48. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1116966-1116991, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctatgcgggaagcaagctacg	Protospacer
********.*****************

49. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1148354-1148379, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgttacgcgggaagcaagctacg	Protospacer
*****.********************

50. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2263710-2263735, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagctagctacg	Protospacer
****************** *******

51. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 2595560-2595585, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagctagctacg	Protospacer
****************** *******

52. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3811978-3812003, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcgagctacg	Protospacer
******************.*******

53. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3883431-3883456, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acctgctacgcgggaagcaagctacg	Protospacer
***.**********************

54. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3941675-3941700, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagcgagctacg	Protospacer
******************.*******

55. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5042748-5042773, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagtaagctacg	Protospacer
*****************.********

56. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5447728-5447753, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagctagctacg	Protospacer
****************** *******

57. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5447951-5447976, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcgggaagctagctacg	Protospacer
****************** *******

58. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5976659-5976684, mismatch: 1, identity: 0.962

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcggaaagcaagctacg	Protospacer
*************.************

59. spacer 31.2|2696970|48|NZ_AP018254|PILER-CR matches to position: 2534176-2534223, mismatch: 1, identity: 0.979

aaattacgtagcttgtttcccgcgtagcgggtattacgtacgcgaagc	CRISPR spacer
aaattacgtagcttgcttcccgcgtagcgggtattacgtacgcgaagc	Protospacer
***************.********************************

60. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 971286-971323, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcgggtattacgaattaca	Protospacer
******************************.*******

61. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 1148355-1148392, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtaacgggtattacaaattaca	Protospacer
*******************.******************

62. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 1955591-1955628, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcgggtattacgaattaca	Protospacer
******************************.*******

63. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 2343085-2343122, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcgggtattgcaaattaca	Protospacer
****************************.*********

64. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 3883432-3883469, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcaggtattacaaattaca	Protospacer
*********************.****************

65. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 3941676-3941713, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagctcgcttcccgcgtagcgggtattacaaattaca	Protospacer
******.*******************************

66. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 1497343-1497380, mismatch: 1, identity: 0.974

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccgcgtagcgggtattacgaattaca	Protospacer
******************************.*******

67. spacer 27.1|2496312|33|NZ_AP018254|CRISPRCasFinder matches to position: 547857-547889, mismatch: 2, identity: 0.939

gtacgtaattcccgctacgcgggaatcaagcta	CRISPR spacer
gtacgtaatacccgctacgcgggaagcaagcta	Protospacer
********* *************** *******

68. spacer 27.1|2496312|33|NZ_AP018254|CRISPRCasFinder matches to position: 1761130-1761162, mismatch: 2, identity: 0.939

gtacgtaattcccgctacgcgggaatcaagcta	CRISPR spacer
gtacgtaatacccgctacgcgggaagcaagcta	Protospacer
********* *************** *******

69. spacer 27.1|2496312|33|NZ_AP018254|CRISPRCasFinder matches to position: 2534183-2534215, mismatch: 2, identity: 0.939

gtacgtaattcccgctacgcgggaatcaagcta	CRISPR spacer
gtacgtaatacccgctacgcgggaagcaagcta	Protospacer
********* *************** *******

70. spacer 27.1|2496312|33|NZ_AP018254|CRISPRCasFinder matches to position: 3476199-3476231, mismatch: 2, identity: 0.939

gtacgtaattcccgctacgcgggaatcaagcta	CRISPR spacer
gtacgtaatacccgctacgcgggaagcaagcta	Protospacer
********* *************** *******

71. spacer 27.1|2496312|33|NZ_AP018254|CRISPRCasFinder matches to position: 5236125-5236157, mismatch: 2, identity: 0.939

gtacgtaattcccgctacgcgggaatcaagcta	CRISPR spacer
gtacgtaatacccgctacgcgggaagcaagcta	Protospacer
********* *************** *******

72. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1639570-1639595, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
accagctacgcgggaagcgagctacg	Protospacer
*** **************.*******

73. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3322914-3322939, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
actcgctatgcgggaagcaagctacg	Protospacer
**.*****.*****************

74. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3382166-3382191, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgcggagagcaagctacg	Protospacer
*************..***********

75. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5585174-5585199, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctacgtgggaagcaggctacg	Protospacer
**********.********.******

76. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 1835231-1835256, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
actcgctacgcgggaagtaagctacg	Protospacer
**.**************.********

77. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 3986302-3986327, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
acctgctacgcggggagcaagctacg	Protospacer
***.**********.***********

78. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5668982-5669007, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
acccgctatgcgggaagctagctacg	Protospacer
********.********* *******

79. spacer 29.1|2605782|26|NZ_AP018254|CRISPRCasFinder matches to position: 5694078-5694103, mismatch: 2, identity: 0.923

acccgctacgcgggaagcaagctacg	CRISPR spacer
acctgctatgcgggaagcaagctacg	Protospacer
***.****.*****************

80. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 1622990-1623027, mismatch: 2, identity: 0.947

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gttgcttgcttcccgcgtagcgggtattacgaattaca	Protospacer
** ***************************.*******

81. spacer 37.1|3768336|38|NZ_AP018254|CRISPRCasFinder matches to position: 2043176-2043213, mismatch: 2, identity: 0.947

gtagcttgcttcccgcgtagcgggtattacaaattaca	CRISPR spacer
gtagcttgcttcccccatagcgggtattacaaattaca	Protospacer
************** *.*********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NC_015909	Borreliella bissettii DN127 plasmid cp32-5, complete sequence	26452-26476	2	0.92
NZ_AP018254_11	11.26\|1290436\|39\|NZ_AP018254\|CRISPRCasFinder,CRT	1290436-1290474	39	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1160819-1160857	2	0.949
NZ_AP018254_11	11.31\|1290437\|38\|NZ_AP018254\|PILER-CR	1290437-1290474	38	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1160819-1160856	2	0.947
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KR093640	Moraxella phage Mcat16, complete genome	2195-2219	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035558	Lactobacillus plantarum strain SRCM103297 plasmid unnamed2	37514-37538	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035175	Lactobacillus plantarum strain SRCM103426 plasmid unnamed1	2684-2708	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035175	Lactobacillus plantarum strain SRCM103426 plasmid unnamed1	106827-106851	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035175	Lactobacillus plantarum strain SRCM103426 plasmid unnamed1	195620-195644	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035133	Lactobacillus plantarum strain SRCM103311 plasmid unnamed2	20321-20345	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035116	Lactobacillus plantarum strain SRCM103295 plasmid unnamed3	113434-113458	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035568	Lactobacillus plantarum strain SRCM103300 plasmid unnamed2	34759-34783	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP012874	Weissella cibaria strain CH2 plasmid pMKC01, complete sequence	20108-20132	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP035268	Weissella cibaria strain SRCM103448 plasmid unnamed1, complete sequence	17081-17105	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP044363	Lactobacillus paracasei strain TD 062 plasmid unnamed2, complete sequence	4366-4390	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP012190	Lactobacillus paracasei strain CAUH35 plasmid unnamed3, complete sequence	24830-24854	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP012191	Lactobacillus paracasei strain CAUH35 plasmid unnamed4, complete sequence	9906-9930	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	MT362618	Microcystis phage MaeS, complete genome	76724-76748	3	0.88
NZ_AP018254_44	44.1\|4956170\|25\|NZ_AP018254\|CRISPRCasFinder	4956170-4956194	25	MK813939	Aeromonas phage 4_L372D, complete genome	58687-58711	3	0.88
NZ_AP018254_44	44.1\|4956170\|25\|NZ_AP018254\|CRISPRCasFinder	4956170-4956194	25	MK804893	Aeromonas phage 2-L372D, complete genome	48545-48569	3	0.88
NZ_AP018254_44	44.1\|4956170\|25\|NZ_AP018254\|CRISPRCasFinder	4956170-4956194	25	NC_048770	Aeromonas phage 2_L372X, complete genome	44462-44486	3	0.88
NZ_AP018254_44	44.1\|4956170\|25\|NZ_AP018254\|CRISPRCasFinder	4956170-4956194	25	MK813941	Aeromonas phage 4_L372XY, complete genome	44411-44435	3	0.88
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP028881	Borreliella bavariensis PBi plasmid cp32-7, complete sequence	16204-16228	4	0.84
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NC_000952	Borreliella burgdorferi B31 plasmid cp32-7, complete sequence	27285-27309	4	0.84
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NC_011736	Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence	27449-27473	4	0.84
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NZ_CP017206	Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence	27748-27772	4	0.84
NZ_AP018254_44	44.1\|4956170\|25\|NZ_AP018254\|CRISPRCasFinder	4956170-4956194	25	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1355330-1355354	4	0.84
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KX349297	Cyanophage S-RIM44 isolate W2_10_0709, complete genome	128393-128417	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KX349293	Cyanophage S-RIM44 isolate Np_20_0711, complete genome	134440-134464	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KX349296	Cyanophage S-RIM44 isolate Sn_13_0910, complete genome	134482-134506	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NC_047734	Cyanophage S-RIM44 isolate Np_42_0711, complete genome	134437-134461	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	MF417875	Uncultured Caudovirales phage clone 10S_11, partial genome	52800-52824	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KU594607	Cyanophage S-RIM44 isolate W2_07_0710, complete genome	128113-128137	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KX349291	Cyanophage S-RIM44 isolate ES_42_0910, complete genome	134482-134506	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	NC_015288	Prochlorococcus phage Syn1, complete genome	126311-126335	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KX349295	Cyanophage S-RIM44 isolate Sn_08_0709, complete genome	128116-128140	5	0.8
NZ_AP018254_6	6.1\|570188\|25\|NZ_AP018254\|CRISPRCasFinder	570188-570212	25	KX349292	Cyanophage S-RIM44 isolate Np_05_0604, complete genome	128116-128140	5	0.8
NZ_AP018254_36	36.5\|3717006\|34\|NZ_AP018254\|PILER-CR,CRISPRCasFinder,CRT	3717006-3717039	34	NZ_CP022993	Paraburkholderia aromaticivorans strain BN5 plasmid pBN3, complete sequence	76096-76129	6	0.824
NZ_AP018254_47	47.2\|5628719\|33\|NZ_AP018254\|PILER-CR,CRISPRCasFinder,CRT	5628719-5628751	33	NZ_CP024940	Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence	1102447-1102479	8	0.758
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	765037-765070	8	0.765
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	864516-864549	8	0.765
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	410947-410980	8	0.765
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	29716-29749	8	0.765
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	72296-72332	9	0.757
NZ_AP018254_14	14.1\|1498460\|30\|NZ_AP018254\|CRISPRCasFinder	1498460-1498489	30	NZ_CP045304	Legionella longbeachae strain B1445CHC plasmid pB1445CHC_73K, complete sequence	42722-42751	9	0.7
NZ_AP018254_33	33.1\|3228182\|30\|NZ_AP018254\|CRISPRCasFinder	3228182-3228211	30	NZ_CP035412	Bacillus subtilis strain SRCM103622 plasmid unnamed1, complete sequence	34472-34501	9	0.7
NZ_AP018254_33	33.1\|3228182\|30\|NZ_AP018254\|CRISPRCasFinder	3228182-3228211	30	NZ_CP028216	Bacillus subtilis strain SRCM102750 plasmid unnamed1, complete sequence	57741-57770	9	0.7
NZ_AP018254_33	33.1\|3228182\|30\|NZ_AP018254\|CRISPRCasFinder	3228182-3228211	30	NZ_CP035398	Bacillus subtilis strain SRCM103773 plasmid unnamed1, complete sequence	40756-40785	9	0.7
NZ_AP018254_33	33.1\|3228182\|30\|NZ_AP018254\|CRISPRCasFinder	3228182-3228211	30	NZ_CP010015	Bacillus sp. YP1 plasmid pBUYP1, complete sequence	58492-58521	9	0.7
NZ_AP018254_33	33.1\|3228182\|30\|NZ_AP018254\|CRISPRCasFinder	3228182-3228211	30	NC_015149	Bacillus subtilis subsp. natto plasmid pLS32 DNA, complete sequence, strain: IAM 11631	21294-21323	9	0.7
NZ_AP018254_36	36.30\|3718840\|34\|NZ_AP018254\|PILER-CR,CRISPRCasFinder,CRT	3718840-3718873	34	NC_014634	Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence	60158-60191	9	0.735
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	507888-507924	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	8994-9030	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	593001-593037	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	224153-224189	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NC_048764	Salmonella phage SE4, complete genome	20812-20848	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP044979	Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence	375915-375951	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	180737-180773	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	38993-39029	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	352173-352209	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	372020-372056	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NC_020385	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-328, complete sequence	214898-214934	10	0.73
NZ_AP018254_10	10.8\|1224838\|37\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	1224838-1224874	37	NZ_CP016589	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence	474060-474096	10	0.73
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	604692-604725	10	0.706
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	417034-417067	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	412479-412512	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	531266-531299	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	1120241-1120274	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	1084376-1084409	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	972907-972940	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	1119948-1119981	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	1107787-1107820	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	993228-993261	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	909316-909349	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	528500-528533	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	1062897-1062930	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	999143-999176	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	1084376-1084409	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	993227-993260	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	1107787-1107820	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	720823-720856	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	725344-725377	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	170479-170512	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	1016250-1016283	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	413666-413699	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP035000	Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence	403550-403583	11	0.676
NZ_AP018254_48	48.24\|5630835\|34\|NZ_AP018254\|CRISPRCasFinder,CRT,PILER-CR	5630835-5630868	34	NZ_CP024313	Rhizobium sp. NXC24 plasmid pRspNXC24b, complete sequence	467778-467811	12	0.647

1. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NC_015909 (Borreliella bissettii DN127 plasmid cp32-5, complete sequence) position: , mismatch: 2, identity: 0.92

ctgctcttcttttttctcctcaact	CRISPR spacer
ttgctcttcttttttctcctctact	Protospacer
.******************** ***

2. spacer 11.26|1290436|39|NZ_AP018254|CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 2, identity: 0.949

tgttgacgtcgatgatctgggcgccgttctcgacctgct	CRISPR spacer
tgttgacgtcgatgacctgcgcgccgttctcgacctgct	Protospacer
***************.*** *******************

3. spacer 11.31|1290437|38|NZ_AP018254|PILER-CR matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 2, identity: 0.947

gttgacgtcgatgatctgggcgccgttctcgacctgct	CRISPR spacer
gttgacgtcgatgacctgcgcgccgttctcgacctgct	Protospacer
**************.*** *******************

4. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KR093640 (Moraxella phage Mcat16, complete genome) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
tttctcttcttttttctcctctact	Protospacer
.* ****************** ***

5. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035558 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed2) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

6. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

7. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

8. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

9. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035133 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed2) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

10. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035116 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed3) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

11. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035568 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed2) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

12. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP012874 (Weissella cibaria strain CH2 plasmid pMKC01, complete sequence) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

13. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035268 (Weissella cibaria strain SRCM103448 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

14. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP044363 (Lactobacillus paracasei strain TD 062 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

15. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP012190 (Lactobacillus paracasei strain CAUH35 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

16. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP012191 (Lactobacillus paracasei strain CAUH35 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ccgctcttcttttttctactcaaat	Protospacer
*.*************** ***** *

17. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to MT362618 (Microcystis phage MaeS, complete genome) position: , mismatch: 3, identity: 0.88

ctgctcttcttttttctcctcaact	CRISPR spacer
ctgctcttttttcttctcctcaatt	Protospacer
********.***.**********.*

18. spacer 44.1|4956170|25|NZ_AP018254|CRISPRCasFinder matches to MK813939 (Aeromonas phage 4_L372D, complete genome) position: , mismatch: 3, identity: 0.88

actggcttgtcttggcgctccctgc	CRISPR spacer
actggcttggcttggcgcaccctgg	Protospacer
********* ******** *****

19. spacer 44.1|4956170|25|NZ_AP018254|CRISPRCasFinder matches to MK804893 (Aeromonas phage 2-L372D, complete genome) position: , mismatch: 3, identity: 0.88

actggcttgtcttggcgctccctgc	CRISPR spacer
actggcttggcttggcgcaccctgg	Protospacer
********* ******** *****

20. spacer 44.1|4956170|25|NZ_AP018254|CRISPRCasFinder matches to NC_048770 (Aeromonas phage 2_L372X, complete genome) position: , mismatch: 3, identity: 0.88

actggcttgtcttggcgctccctgc	CRISPR spacer
actggcttggcttggcgcaccctgg	Protospacer
********* ******** *****

21. spacer 44.1|4956170|25|NZ_AP018254|CRISPRCasFinder matches to MK813941 (Aeromonas phage 4_L372XY, complete genome) position: , mismatch: 3, identity: 0.88

actggcttgtcttggcgctccctgc	CRISPR spacer
actggcttggcttggcgcaccctgg	Protospacer
********* ******** *****

22. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP028881 (Borreliella bavariensis PBi plasmid cp32-7, complete sequence) position: , mismatch: 4, identity: 0.84

ctgctcttcttttttctcctcaact	CRISPR spacer
ttgttcttcttttttctcctctaca	Protospacer
.**.***************** **

23. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NC_000952 (Borreliella burgdorferi B31 plasmid cp32-7, complete sequence) position: , mismatch: 4, identity: 0.84

ctgctcttcttttttctcctcaact	CRISPR spacer
ttgttcttcttttttctcctctaca	Protospacer
.**.***************** **

24. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NC_011736 (Borreliella burgdorferi ZS7 plasmid ZS7_cp32-4, complete sequence) position: , mismatch: 4, identity: 0.84

ctgctcttcttttttctcctcaact	CRISPR spacer
ttgttcttcttttttctcctctaca	Protospacer
.**.***************** **

25. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP017206 (Borreliella burgdorferi strain B331 plasmid B331_cp32_4, complete sequence) position: , mismatch: 4, identity: 0.84

ctgctcttcttttttctcctcaact	CRISPR spacer
ttgttcttcttttttctcctctaca	Protospacer
.**.***************** **

26. spacer 44.1|4956170|25|NZ_AP018254|CRISPRCasFinder matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 4, identity: 0.84

actggcttgtcttggcgctccctgc	CRISPR spacer
cgtggcttgtattggcgcgccctgc	Protospacer
  ******** ******* ******

27. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KX349297 (Cyanophage S-RIM44 isolate W2_10_0709, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

28. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KX349293 (Cyanophage S-RIM44 isolate Np_20_0711, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

29. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KX349296 (Cyanophage S-RIM44 isolate Sn_13_0910, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

30. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NC_047734 (Cyanophage S-RIM44 isolate Np_42_0711, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

31. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to MF417875 (Uncultured Caudovirales phage clone 10S_11, partial genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
taattcttcttttttatcctcaact	Protospacer
. ..*********** *********

32. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KU594607 (Cyanophage S-RIM44 isolate W2_07_0710, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

33. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KX349291 (Cyanophage S-RIM44 isolate ES_42_0910, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

34. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to NC_015288 (Prochlorococcus phage Syn1, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

35. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KX349295 (Cyanophage S-RIM44 isolate Sn_08_0709, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

36. spacer 6.1|570188|25|NZ_AP018254|CRISPRCasFinder matches to KX349292 (Cyanophage S-RIM44 isolate Np_05_0604, complete genome) position: , mismatch: 5, identity: 0.8

ctgctcttcttttttctcctcaact	CRISPR spacer
attgagttcttttttctcctcaact	Protospacer
 *    *******************

37. spacer 36.5|3717006|34|NZ_AP018254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022993 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN3, complete sequence) position: , mismatch: 6, identity: 0.824

agcagccgccatgcgatcgcagaa---gatgccctct	CRISPR spacer
agcagccgcaatgcgatcgccgaacccgatgcgc---	Protospacer
********* ********** ***   ***** *

38. spacer 47.2|5628719|33|NZ_AP018254|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024940 (Paraburkholderia hospita strain mHSR1 plasmid pmHSR1_P, complete sequence) position: , mismatch: 8, identity: 0.758

cccaatctggcgtatgcacaggcggtggcagac	CRISPR spacer
accaagctggcgtatgcactggcggttggatgt	Protospacer
 **** ************* ****** * * ..

39. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.765

--caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctggc--cttcagcgcatcgaagccggcgtcgag	Protospacer
  * ***  ******* *************.**..

40. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

--caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctggc--cttcagcgcatcgaagccggcgtcgag	Protospacer
  * ***  ******* *************.**..

41. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 8, identity: 0.765

--caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctggc--cttcagcgcatcgaagccggcgtcgag	Protospacer
  * ***  ******* *************.**..

42. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 8, identity: 0.765

--caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctggc--cttcagcgcatcgaagccggcgtcgag	Protospacer
  * ***  ******* *************.**..

43. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 9, identity: 0.757

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
attaaagttaattcaatgggcaaaaaaggtggaagga	Protospacer
.  **** ***** ***************  .* ***

44. spacer 14.1|1498460|30|NZ_AP018254|CRISPRCasFinder matches to NZ_CP045304 (Legionella longbeachae strain B1445CHC plasmid pB1445CHC_73K, complete sequence) position: , mismatch: 9, identity: 0.7

aagaggtgacgaaagtccttataaatttga	CRISPR spacer
ttttaatgacgaaaatccatataaatttgt	Protospacer
    ..********.*** **********

45. spacer 33.1|3228182|30|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035412 (Bacillus subtilis strain SRCM103622 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggtcacccactcaacgaatatcttatcgaa	CRISPR spacer
tagatcttgctcaactaatatcttatcgaa	Protospacer
 .   *...****** **************

46. spacer 33.1|3228182|30|NZ_AP018254|CRISPRCasFinder matches to NZ_CP028216 (Bacillus subtilis strain SRCM102750 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggtcacccactcaacgaatatcttatcgaa	CRISPR spacer
tagatcttgctcaactaatatcttatcgaa	Protospacer
 .   *...****** **************

47. spacer 33.1|3228182|30|NZ_AP018254|CRISPRCasFinder matches to NZ_CP035398 (Bacillus subtilis strain SRCM103773 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggtcacccactcaacgaatatcttatcgaa	CRISPR spacer
tagatcttgctcaactaatatcttatcgaa	Protospacer
 .   *...****** **************

48. spacer 33.1|3228182|30|NZ_AP018254|CRISPRCasFinder matches to NZ_CP010015 (Bacillus sp. YP1 plasmid pBUYP1, complete sequence) position: , mismatch: 9, identity: 0.7

ggtcacccactcaacgaatatcttatcgaa	CRISPR spacer
tagatcttgctcaactaatatcttatcgaa	Protospacer
 .   *...****** **************

49. spacer 33.1|3228182|30|NZ_AP018254|CRISPRCasFinder matches to NC_015149 (Bacillus subtilis subsp. natto plasmid pLS32 DNA, complete sequence, strain: IAM 11631) position: , mismatch: 9, identity: 0.7

ggtcacccactcaacgaatatcttatcgaa	CRISPR spacer
tagatcttgctcaactaatatcttatcgaa	Protospacer
 .   *...****** **************

50. spacer 36.30|3718840|34|NZ_AP018254|PILER-CR,CRISPRCasFinder,CRT matches to NC_014634 (Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence) position: , mismatch: 9, identity: 0.735

taaggatttcttcagctataaagcgactaaatgt	CRISPR spacer
taaagatttctttagctataaagctataacgtta	Protospacer
***.********.*********** *. * .*

51. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

52. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

53. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

54. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

55. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NC_048764 (Salmonella phage SE4, complete genome) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
cgataagataattgaatggacagaaaagggccccgag	Protospacer
 .* ***************.**.*******.  **..

56. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

57. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttacttgaatgggcaaaaaaggtggaaggc	Protospacer
.  **** ** ******************  .* **

58. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

59. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttacttgaatgggcaaaaaaggtggaaggc	Protospacer
.  **** ** ******************  .* **

60. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

61. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NC_020385 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-328, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

62. spacer 10.8|1224838|37|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 10, identity: 0.73

gaaaaagataattgaatgggcaaaaaagggtaacgga	CRISPR spacer
actaaagttaattggatgggcaaaaaaggtggaaggc	Protospacer
.  **** ******.**************  .* **

63. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 10, identity: 0.706

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcatcgaagccggcatcgag	Protospacer
..  *. ******* ****************..

64. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcatcgaagccggcgtcgag	Protospacer
..  *. ******* *************.**..

65. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
cgctggccttcagcgcatcgaagccggcgtcgag	Protospacer
*.   . ******* *************.**..

66. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

67. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

68. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

69. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

70. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

71. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

72. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

73. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

74. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

75. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

76. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

77. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

78. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

79. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

80. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
cgctggccttcagcgcatcgaagccggcgtcgag	Protospacer
*.   . ******* *************.**..

81. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcatcgaagccggcgtcgag	Protospacer
..  *. ******* *************.**..

82. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcatcgaagccggcgtcgag	Protospacer
..  *. ******* *************.**..

83. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcgtcgaagccggcatcgag	Protospacer
..  *. ******* *.**************..

84. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcatcgaagccggcgtcgag	Protospacer
..  *. ******* *************.**..

85. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 11, identity: 0.676

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
tgctcgccttcagcgcatcgaatccggcatcgag	Protospacer
..  *. ******* ******* ********..

86. spacer 48.24|5630835|34|NZ_AP018254|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024313 (Rhizobium sp. NXC24 plasmid pRspNXC24b, complete sequence) position: , mismatch: 12, identity: 0.647

caggcaacttcagcccatcgaagccggcatcagt	CRISPR spacer
ggaacagcttcagccgatcgaagccggcgctgcc	Protospacer
 ...**.******** ************.... .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1171023 : 1209920

Escherichia_phage(25.0%)

tRNA,protease,integrase,transposase

attL 1168051:1168070|attR 1212057:1212076

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1168051:1168070	attL	NA	NA	NA	NA
WP_096620690.1\|1171023_1171683_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_096620691.1\|1171934_1172687_+	SinI family restriction endonuclease	NA	NA	NA	NA
WP_096620692.1\|1172678_1174106_-	DNA cytosine methyltransferase	M9UXR6	Escherichia_phage	2.3e-24	28.2
WP_096620693.1\|1174354_1175356_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_096620694.1\|1175457_1175910_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096620695.1\|1175980_1176265_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096620696.1\|1176437_1176680_+	thioredoxin family protein	NA	NA	NA	NA
WP_096620697.1\|1176700_1177348_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_096620698.1\|1177390_1178281_+	DMT family transporter	NA	NA	NA	NA
WP_096620699.1\|1178525_1179098_+	hypothetical protein	NA	NA	NA	NA
WP_157780647.1\|1179866_1180304_+	hypothetical protein	NA	NA	NA	NA
WP_096620702.1\|1180504_1182589_+	hypothetical protein	NA	NA	NA	NA
WP_096625918.1\|1182668_1183460_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_096620703.1\|1183608_1184070_+	hypothetical protein	NA	NA	NA	NA
WP_096620705.1\|1185219_1191066_+	hypothetical protein	G0YQI6	Erwinia_phage	9.5e-08	42.4
WP_096620706.1\|1191474_1192653_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A191SB13	Nostoc_phage	8.3e-129	61.0
WP_096620707.1\|1194123_1194453_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	A0A1P8DJJ6	Virus_Rctr41k	8.8e-12	42.6
WP_096620708.1\|1194609_1195668_-	polysaccharide pyruvyl transferase CsaB	NA	NA	NA	NA
WP_096620709.1\|1196020_1196950_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_096620710.1\|1197166_1197949_-	ABC-2 family transporter protein	NA	NA	NA	NA
WP_096620712.1\|1203669_1204539_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_096620713.1\|1204594_1205068_+	DUF4079 domain-containing protein	NA	NA	NA	NA
WP_096620714.1\|1205072_1207451_+	ComEC/Rec2 family competence protein	NA	NA	NA	NA
WP_096620715.1\|1208384_1209920_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
1212057:1212076	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP018254

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CRISPR-Cas detection and classification

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