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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023500 Staphylococcus aureus strain FDAARGOS_412 chromosome, complete genome 11 crisprs cas3,DEDDh,csa3,WYL 9 5 8 0

Results visualization

1. NZ_CP023500
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_1 125398-125498 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_2 370052-370144 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_3 486132-486214 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_4 527184-527264 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_5 532582-532667 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_6 575970-576051 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_7 640760-641042 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_8 1513522-1513748 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_9 1670279-1670357 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_10 1906490-1906570 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP023500_11 2030577-2030770 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 2472557-2472585 0 1.0
NZ_CP023500_6 6.1|575994|34|NZ_CP023500|CRISPRCasFinder 575994-576027 34 NZ_CP023500.1 1067142-1067175 0 1.0
NZ_CP023500_6 6.1|575994|34|NZ_CP023500|CRISPRCasFinder 575994-576027 34 NZ_CP023500.1 1155585-1155618 0 1.0
NZ_CP023500_11 11.2|2030656|36|NZ_CP023500|CRT 2030656-2030691 36 NZ_CP023500.1 858941-858976 0 1.0
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 86865-86893 1 0.966
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 86920-86948 1 0.966
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 1513485-1513513 1 0.966
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP023500.1 495604-495629 1 0.962
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP023500.1 858983-859008 1 0.962
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP023500.1 2472525-2472550 1 0.962
NZ_CP023500_7 7.1|640790|26|NZ_CP023500|CRT 640790-640815 26 NZ_CP023500.1 640734-640759 1 0.962
NZ_CP023500_7 7.3|640904|26|NZ_CP023500|CRT 640904-640929 26 NZ_CP023500.1 532668-532693 1 0.962
NZ_CP023500_9 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder 1670302-1670334 33 NZ_CP023500.1 532648-532680 1 0.97
NZ_CP023500_9 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder 1670302-1670334 33 NZ_CP023500.1 1067097-1067129 1 0.97
NZ_CP023500_9 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder 1670302-1670334 33 NZ_CP023500.1 1334987-1335019 1 0.97
NZ_CP023500_9 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder 1670302-1670334 33 NZ_CP023500.1 2306994-2307026 1 0.97
NZ_CP023500_11 11.2|2030656|36|NZ_CP023500|CRT 2030656-2030691 36 NZ_CP023500.1 1513478-1513513 1 0.972
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 576036-576064 2 0.931
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 660429-660457 2 0.931
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 858948-858976 2 0.931
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 1334926-1334954 2 0.931
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 1681105-1681133 2 0.931
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 NZ_CP023500.1 2222426-2222454 2 0.931
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP023500.1 495660-495685 2 0.923
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP023500.1 640734-640759 2 0.923
NZ_CP023500_7 7.1|640790|26|NZ_CP023500|CRT 640790-640815 26 NZ_CP023500.1 495604-495629 2 0.923
NZ_CP023500_7 7.1|640790|26|NZ_CP023500|CRT 640790-640815 26 NZ_CP023500.1 858983-859008 2 0.923
NZ_CP023500_7 7.1|640790|26|NZ_CP023500|CRT 640790-640815 26 NZ_CP023500.1 2472525-2472550 2 0.923
NZ_CP023500_7 7.3|640904|26|NZ_CP023500|CRT 640904-640929 26 NZ_CP023500.1 86731-86756 2 0.923
NZ_CP023500_9 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder 1670302-1670334 33 NZ_CP023500.1 1155631-1155663 2 0.939
NZ_CP023500_11 11.1|2030600|33|NZ_CP023500|CRT 2030600-2030632 33 NZ_CP023500.1 532648-532680 2 0.939
NZ_CP023500_11 11.1|2030600|33|NZ_CP023500|CRT 2030600-2030632 33 NZ_CP023500.1 1067097-1067129 2 0.939
NZ_CP023500_11 11.1|2030600|33|NZ_CP023500|CRT 2030600-2030632 33 NZ_CP023500.1 1155631-1155663 2 0.939
NZ_CP023500_11 11.1|2030600|33|NZ_CP023500|CRT 2030600-2030632 33 NZ_CP023500.1 2306994-2307026 2 0.939
NZ_CP023500_11 11.2|2030656|36|NZ_CP023500|CRT 2030656-2030691 36 NZ_CP023500.1 1334926-1334961 2 0.944
NZ_CP023500_11 11.2|2030656|36|NZ_CP023500|CRT 2030656-2030691 36 NZ_CP023500.1 1681105-1681140 2 0.944
NZ_CP023500_11 11.3|2030715|33|NZ_CP023500|CRT 2030715-2030747 33 NZ_CP023500.1 532648-532680 2 0.939
NZ_CP023500_11 11.3|2030715|33|NZ_CP023500|CRT 2030715-2030747 33 NZ_CP023500.1 1067097-1067129 2 0.939
NZ_CP023500_11 11.3|2030715|33|NZ_CP023500|CRT 2030715-2030747 33 NZ_CP023500.1 2306994-2307026 2 0.939

1. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 2472557-2472585, mismatch: 0, identity: 1.0

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtagaatttcttttcgaaa	Protospacer
*****************************

2. spacer 6.1|575994|34|NZ_CP023500|CRISPRCasFinder matches to position: 1067142-1067175, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 6.1|575994|34|NZ_CP023500|CRISPRCasFinder matches to position: 1155585-1155618, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

4. spacer 11.2|2030656|36|NZ_CP023500|CRT matches to position: 858941-858976, mismatch: 0, identity: 1.0

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttctttttgaaattctcta	Protospacer
************************************

5. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 86865-86893, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

6. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 86920-86948, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

7. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 1513485-1513513, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

8. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to position: 495604-495629, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** ********************

9. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to position: 858983-859008, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
************.*************

10. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to position: 2472525-2472550, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
************.*************

11. spacer 7.1|640790|26|NZ_CP023500|CRT matches to position: 640734-640759, mismatch: 1, identity: 0.962

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaggctggtgg	Protospacer
***********************.**

12. spacer 7.3|640904|26|NZ_CP023500|CRT matches to position: 532668-532693, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

13. spacer 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder matches to position: 532648-532680, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

14. spacer 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder matches to position: 1067097-1067129, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

15. spacer 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder matches to position: 1334987-1335019, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattatagtaagctgacttttcgtcagcttctg	Protospacer
****** **************************

16. spacer 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder matches to position: 2306994-2307026, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

17. spacer 11.2|2030656|36|NZ_CP023500|CRT matches to position: 1513478-1513513, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

18. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 576036-576064, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

19. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 660429-660457, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

20. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 858948-858976, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttctttttgaaa	Protospacer
********.***************.****

21. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 1334926-1334954, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

22. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 1681105-1681133, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaa	Protospacer
********.***********.********

23. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to position: 2222426-2222454, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

24. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to position: 495660-495685, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctatgttggggccccg	Protospacer
***** ******.*************

25. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to position: 640734-640759, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccaccagcctctgtgttggggccccg	Protospacer
**.*****.*****************

26. spacer 7.1|640790|26|NZ_CP023500|CRT matches to position: 495604-495629, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*****************.** *****

27. spacer 7.1|640790|26|NZ_CP023500|CRT matches to position: 858983-859008, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

28. spacer 7.1|640790|26|NZ_CP023500|CRT matches to position: 2472525-2472550, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

29. spacer 7.3|640904|26|NZ_CP023500|CRT matches to position: 86731-86756, mismatch: 2, identity: 0.923

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacaaagaagctgacga	Protospacer
************* ********.***

30. spacer 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder matches to position: 1155631-1155663, mismatch: 2, identity: 0.939

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
******.******************* ******

31. spacer 11.1|2030600|33|NZ_CP023500|CRT matches to position: 532648-532680, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

32. spacer 11.1|2030600|33|NZ_CP023500|CRT matches to position: 1067097-1067129, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

33. spacer 11.1|2030600|33|NZ_CP023500|CRT matches to position: 1155631-1155663, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

34. spacer 11.1|2030600|33|NZ_CP023500|CRT matches to position: 2306994-2307026, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

35. spacer 11.2|2030656|36|NZ_CP023500|CRT matches to position: 1334926-1334961, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

36. spacer 11.2|2030656|36|NZ_CP023500|CRT matches to position: 1681105-1681140, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

37. spacer 11.3|2030715|33|NZ_CP023500|CRT matches to position: 532648-532680, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

38. spacer 11.3|2030715|33|NZ_CP023500|CRT matches to position: 1067097-1067129, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

39. spacer 11.3|2030715|33|NZ_CP023500|CRT matches to position: 2306994-2307026, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP023500_7 7.4|640960|53|NZ_CP023500|CRT 640960-641012 53 MG543995 Staphylococcus phage UPMK_1, partial genome 76246-76298 4 0.925
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP034332 Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence 3359-3384 5 0.808
NZ_CP023500_5 5.1|532612|26|NZ_CP023500|CRISPRCasFinder 532612-532637 26 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 715511-715536 5 0.808
NZ_CP023500_7 7.3|640904|26|NZ_CP023500|CRT 640904-640929 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
NZ_CP023500_4 4.1|527210|29|NZ_CP023500|CRISPRCasFinder 527210-527238 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759
NZ_CP023500_9 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder 1670302-1670334 33 NC_021536 Synechococcus phage S-IOM18 genomic sequence 159745-159777 10 0.697

1. spacer 7.4|640960|53|NZ_CP023500|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttgagaaactatcatttctgtcccactccctt	Protospacer
************************ **** *********************  

2. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

3. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to NZ_CP034332 (Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtctgggcctac	Protospacer
****************. *****.  

4. spacer 5.1|532612|26|NZ_CP023500|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtttggccctga	Protospacer
***************** ** **. .

5. spacer 7.3|640904|26|NZ_CP023500|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcga	CRISPR spacer
taaggcctcaacacagaagctggcgt	Protospacer
...****.***************** 

6. spacer 4.1|527210|29|NZ_CP023500|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtaggatttcttctaagtg	Protospacer
**************.*******.* .. .

7. spacer 9.1|1670302|33|NZ_CP023500|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 10, identity: 0.697

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
ttttatcgtaaggtgagttttcgtcaagcacct	Protospacer
. ********** *** *********. . *. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 464239 : 472059 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 484031 : 498818 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 577532 : 598741 33 Staphylococcus_phage(77.78%) terminase,coat,integrase attL 580069:580085|attR 596004:596020
DBSCAN-SWA_4 759658 : 768131 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 1306548 : 1314860 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_6 1383998 : 1393041 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_7 1518711 : 1600191 75 Staphylococcus_phage(93.22%) tRNA,protease,transposase NA
DBSCAN-SWA_8 1684660 : 1784455 120 Staphylococcus_phage(88.89%) portal,capsid,tail,holin,protease,terminase,tRNA,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage