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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP023524 Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP023523 Burkholderia gladioli pv. gladioli strain FDAARGOS_389 chromosome 2, complete sequence 0 crisprs csa3,DinG,WYL,cas3 0 0 3 0
NZ_CP023522 Burkholderia gladioli pv. gladioli strain FDAARGOS_389 chromosome 1, complete sequence 0 crisprs DEDDh,csa3,cas3,WYL 0 0 12 0

Results visualization

1. NZ_CP023522
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 33064 : 104030 73 uncultured_Caudovirales_phage(24.32%) protease,portal,head,capsid,tRNA,terminase,plate,integrase,tail attL 68207:68233|attR 110798:110824
DBSCAN-SWA_2 1044634 : 1087915 55 uncultured_Caudovirales_phage(32.14%) protease,head,portal,capsid,tRNA,terminase,plate,integrase,tail attL 1047970:1047986|attR 1079321:1079337
DBSCAN-SWA_3 1136032 : 1225274 102 Burkholderia_virus(25.71%) head,portal,capsid,tRNA,transposase,terminase,plate,integrase,tail attL 1182621:1182637|attR 1223428:1223444
DBSCAN-SWA_4 1907210 : 1915539 8 Cowpox_virus(16.67%) NA NA
DBSCAN-SWA_5 1994247 : 2003629 7 Bacillus_virus(33.33%) tRNA NA
DBSCAN-SWA_6 2233209 : 2242176 7 Roseobacter_phage(16.67%) NA NA
DBSCAN-SWA_7 2508008 : 2559602 43 Pseudomonas_phage(25.0%) plate,tRNA,integrase,tail attL 2554024:2554045|attR 2559727:2559748
DBSCAN-SWA_8 2805769 : 2886239 70 Burkholderia_phage(58.62%) tRNA,plate,holin,integrase,tail attL 2793918:2793937|attR 2830968:2830987
DBSCAN-SWA_9 3002260 : 3061225 50 Erysipelothrix_phage(13.33%) protease,tRNA,integrase,transposase attL 2997435:2997452|attR 3023239:3023256
DBSCAN-SWA_10 3720544 : 3731435 9 Bacillus_thuringiensis_phage(14.29%) tRNA,protease NA
DBSCAN-SWA_11 4090811 : 4099045 13 Erwinia_phage(16.67%) NA NA
DBSCAN-SWA_12 4102931 : 4111420 14 Burkholderia_virus(28.57%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP023523
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 350880 : 358589 12 Burkholderia_virus(33.33%) integrase attL 345596:345610|attR 353791:353805
DBSCAN-SWA_2 364544 : 373443 12 Escherichia_phage(37.5%) terminase NA
DBSCAN-SWA_3 769299 : 777838 9 Bacillus_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP023524
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2543 : 61607 57 Stx2-converting_phage(16.67%) integrase,transposase attL 1126:1141|attR 46593:46608
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage