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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017161 Bordetella pertussis strain J151 chromosome, complete genome 4 crisprs cas3,csa3,DEDDh,DinG 0 0 23 0

Results visualization

1. NZ_CP017161
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017161_1 644858-644967 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017161_2 2929477-2929593 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017161_3 3644352-3644445 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017161_4 3825801-3825885 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 78583 49 Synechococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_2 232661 : 307004 54 uncultured_Mediterranean_phage(15.38%) transposase NA
DBSCAN-SWA_3 489362 : 607257 101 Acinetobacter_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_4 694409 : 771718 58 Bacillus_phage(20.0%) tRNA,transposase,protease,integrase attL 741546:741564|attR 761434:761452
DBSCAN-SWA_5 1027055 : 1084717 52 Bacillus_virus(25.0%) transposase NA
DBSCAN-SWA_6 1089199 : 1151378 56 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_7 1154930 : 1221397 50 uncultured_Mediterranean_phage(25.0%) transposase,protease NA
DBSCAN-SWA_8 1343652 : 1389377 44 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_9 1469054 : 1521205 44 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_10 1565130 : 1633216 57 Streptococcus_virus(11.11%) tRNA,transposase NA
DBSCAN-SWA_11 1669165 : 1724756 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_12 1732052 : 1778433 39 Pandoravirus(14.29%) tRNA,transposase NA
DBSCAN-SWA_13 1959616 : 2029265 55 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_14 2040761 : 2090156 45 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_15 2101360 : 2169736 59 Klosneuvirus(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_16 2223070 : 2281395 49 Synechococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_17 2629547 : 2696046 55 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_18 2878447 : 3029151 118 uncultured_Mediterranean_phage(16.67%) tRNA,transposase,holin NA
DBSCAN-SWA_19 3050102 : 3123643 58 Bacillus_virus(16.67%) transposase NA
DBSCAN-SWA_20 3255126 : 3324129 55 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_21 3339575 : 3439687 106 uncultured_Caudovirales_phage(14.29%) transposase,tail,tRNA,terminase,protease NA
DBSCAN-SWA_22 3600356 : 3655330 44 Lake_Baikal_phage(20.0%) transposase NA
DBSCAN-SWA_23 3745142 : 3860810 99 Bacillus_phage(12.5%) tRNA,transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage