Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017166 Bordetella pertussis strain J170 chromosome, complete genome 5 crisprs csa3,cas3,DinG,DEDDh 0 0 28 0

Results visualization

1. NZ_CP017166
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017166_1 250585-250669 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017166_2 432028-432121 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017166_3 995295-995389 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017166_4 1819799-1819926 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017166_5 3430366-3430475 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27282 : 78584 49 Synechococcus_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_2 107426 : 175250 56 Bacillus_phage(22.22%) tRNA,transposase NA
DBSCAN-SWA_3 205631 : 266518 50 uncultured_Caudovirales_phage(33.33%) protease,tRNA,transposase NA
DBSCAN-SWA_4 277134 : 303015 26 Pithovirus(33.33%) protease,transposase NA
DBSCAN-SWA_5 390851 : 448360 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 589365 : 650556 55 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_7 655880 : 702071 50 uncultured_Caudovirales_phage(18.18%) tail,terminase,tRNA,transposase NA
DBSCAN-SWA_8 708237 : 762167 46 Planktothrix_phage(50.0%) tRNA,transposase NA
DBSCAN-SWA_9 884754 : 952730 56 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_10 996259 : 1068776 60 Enterococcus_phage(14.29%) tRNA,transposase NA
DBSCAN-SWA_11 1072529 : 1134605 51 Catovirus(20.0%) holin,tRNA,transposase NA
DBSCAN-SWA_12 1152175 : 1218693 52 Erysipelothrix_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_13 1269621 : 1326832 49 Klosneuvirus(16.67%) transposase NA
DBSCAN-SWA_14 1417065 : 1469218 44 Salmonella_phage(25.0%) tRNA,transposase NA
DBSCAN-SWA_15 1513143 : 1573055 50 Streptococcus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_16 1618227 : 1673818 47 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_17 1831585 : 1890855 51 Klosneuvirus(40.0%) protease,tRNA,transposase NA
DBSCAN-SWA_18 1901095 : 1944369 44 Staphylococcus_phage(25.0%) transposase NA
DBSCAN-SWA_19 1974142 : 2038511 51 Vibrio_phage(20.0%) transposase NA
DBSCAN-SWA_20 2170037 : 2219690 43 Synechococcus_phage(15.38%) tRNA,transposase NA
DBSCAN-SWA_21 2575467 : 2641967 56 uncultured_Caudovirales_phage(40.0%) transposase NA
DBSCAN-SWA_22 2670081 : 2707493 39 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_23 2806620 : 2870112 55 Diachasmimorpha_longicaudata_entomopoxvirus(20.0%) transposase NA
DBSCAN-SWA_24 2884589 : 2925948 30 uncultured_Mediterranean_phage(40.0%) protease,transposase NA
DBSCAN-SWA_25 2956334 : 3010565 48 Planktothrix_phage(16.67%) transposase NA
DBSCAN-SWA_26 3379969 : 3444902 55 Staphylococcus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_27 3462646 : 3515051 47 Acinetobacter_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_28 3532169 : 3585970 46 Catovirus(11.11%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage