CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP017262	Lacticaseibacillus paracasei strain FAM18149 plasmid pFAM18149.21, complete sequence	0 crisprs	NA	0	1
NZ_CP017266	Lacticaseibacillus paracasei strain FAM18149 plasmid pFAM18149.25, complete sequence	1 crisprs	NA	1	5
NZ_CP017264	Lacticaseibacillus paracasei strain FAM18149 plasmid pFAM18149.23, complete sequence	0 crisprs	PrimPol	0	1
NZ_CP017265	Lacticaseibacillus paracasei strain FAM18149 plasmid pFAM18149.24, complete sequence	1 crisprs	csa3	1	0
NZ_CP017263	Lacticaseibacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence	1 crisprs	NA	2	0
NZ_CP017261	Lacticaseibacillus paracasei strain FAM18149 chromosome, complete genome	0 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	17

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9251 : 41531

Staphylococcus_phage(25.0%)

holin,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011674169.1\|9251_9356_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_016372359.1\|9511_9901_-	hypothetical protein	NA	NA	NA	NA
WP_003587058.1\|9903_10047_-	hypothetical protein	NA	NA	NA	NA
WP_003587060.1\|10039_10489_-	hypothetical protein	NA	NA	NA	NA
WP_003570626.1\|10502_10793_-	hypothetical protein	NA	NA	NA	NA
WP_016374048.1\|10802_11249_-	hypothetical protein	NA	NA	NA	NA
WP_096836562.1\|11915_12275_+	transcriptional regulator	NA	NA	NA	NA
WP_096836565.1\|12452_13240_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_021353390.1\|13645_13735_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_016377529.1\|14201_15551_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	7.8e-123	50.1
WP_071799104.1\|15592_15787_+\|transposase	transposase	NA	NA	NA	NA
WP_096836569.1\|16134_16921_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_096836571.1\|16908_17232_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003589800.1\|17575_18454_+	PRD domain-containing protein	NA	NA	NA	NA
WP_050894538.1\|18574_20308_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_003589794.1\|20334_21759_+	6-phospho-beta-galactosidase	NA	NA	NA	NA
WP_003589792.1\|21807_22143_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_096836575.1\|22677_23483_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_002819966.1\|23544_23829_-	BRCT domain-containing protein	NA	NA	NA	NA
WP_096836579.1\|23834_24485_-	recombinase family protein	M9Q1K0	Clostridium_phage	1.1e-18	37.6
WP_016377587.1\|24882_25140_-	hypothetical protein	NA	NA	NA	NA
WP_018041603.1\|26386_26545_+	hypothetical protein	NA	NA	NA	NA
WP_016364943.1\|26546_26729_+	hypothetical protein	NA	NA	NA	NA
WP_022669498.1\|27002_27686_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	3.6e-60	51.8
WP_003625288.1\|27940_28219_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_016386159.1\|28208_28511_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_003573999.1\|28526_29945_-\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_096836592.1\|30441_31065_-	phosphoribosyltransferase	NA	NA	NA	NA
WP_022669498.1\|31422_32106_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	3.6e-60	51.8
WP_096836594.1\|32127_32844_+	trehalose operon repressor	NA	NA	NA	NA
WP_016386086.1\|32895_34548_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_003597659.1\|34561_36574_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_096836470.1\|37410_38331_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	4.5e-37	34.6
WP_096836596.1\|38517_39381_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	3.1e-24	30.5
WP_016377556.1\|39811_40561_+	TerC family protein	A0A068EP98	Bacillus_phage	2.1e-45	44.0
WP_096836598.1\|40601_41531_-\|transposase	IS30-like element ISLpl1 family transposase	H7BW47	unidentified_phage	2.3e-25	34.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017266

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017266_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017266_1

28699-28792

Orphan

Consensus_repeat	Method
CACATTTGCACATTTACACATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017266_1

>merge|NZ_CP017266|1|28699-28792|CRISPRCasFinder
CGAATTTGCACATTTGCACATTTACACATTTGTACATTTACATATATGTAAATGTGTAAAAATATCCGCATACCTTTTACACATTTACACATTT

>NZ_CP017266|1|1|28699-28792|CRISPRCasFinder
CGAATTTGCACATTTGCACATTT	ACACATTTGTACATTTACATATATGTAAATGTGTAAAAATATCCGCAT
ACCTTTTACACATTTACACATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017266.1\|WP_050894563.1\|17048_17978_-\|IS30-like-element-ISLpl1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP017266.1\|WP_002816607.1\|39071_39755_+\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP017266.1\|WP_080638569.1\|20581_20809_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017266.1\|WP_016386062.1\|31668_32226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017266.1\|WP_003603789.1\|20831_21110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017266.1\|WP_003582592.1\|28966_29848_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_CP017266.1\|WP_016386331.1\|26777_28253_-\|primase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378031
NZ_CP017266.1\|WP_096836738.1\|36242_37163_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP017266.1\|WP_003582590.1\|29840_30227_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017266.1\|WP_096836737.1\|32320_33190_-\|DUF2075-domain-containing-protein	unknown	unknown	gnl\|CDD\|378274
NZ_CP017266.1\|WP_096836740.1\|37276_38452_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP017266.1\|WP_003603786.1\|22303_23212_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_CP017266.1\|WP_096836735.1\|30534_31322_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP017266.1\|WP_003600616.1\|35532_36042_+\|DUF308-domain-containing-protein	unknown	unknown	gnl\|CDD\|225786
NZ_CP017266.1\|WP_096836734.1\|25849_26637_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP017266.1\|WP_002819873.1\|24937_25219_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_CP017266.1\|WP_096836732.1\|24465_24948_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017266.1\|WP_096836728.1\|15524_16436_-\|cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|223110
NZ_CP017266.1\|WP_096836465.1\|33621_34638_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP017266.1\|WP_096836730.1\|18269_20330_-\|MobA/MobL-family-protein	unknown	unknown	gnl\|CDD\|367473

Protein	Function_ID	Function_description	E-value
NZ_CP017266.1\|WP_050894563.1\|17048_17978_-\|IS30-like-element-ISLpl1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.51127e-70
NZ_CP017266.1\|WP_002816607.1\|39071_39755_+\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.4394e-66
NZ_CP017266.1\|WP_003582592.1\|28966_29848_+\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	9.43199e-43
NZ_CP017266.1\|WP_016386331.1\|26777_28253_-\|primase-C-terminal-domain-containing-protein	gnl\|CDD\|378031	pfam08708, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	5.5912e-11
NZ_CP017266.1\|WP_096836738.1\|36242_37163_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	3.73194e-60
NZ_CP017266.1\|WP_096836737.1\|32320_33190_-\|DUF2075-domain-containing-protein	gnl\|CDD\|378274	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075). This domain, found in various prokaryotic proteins (including putative ATP/GTP binding proteins), has no known function.	2.35109e-111
NZ_CP017266.1\|WP_096836740.1\|37276_38452_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	4.17746e-110
NZ_CP017266.1\|WP_003603786.1\|22303_23212_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.28916e-87
NZ_CP017266.1\|WP_096836735.1\|30534_31322_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	4.43767e-21
NZ_CP017266.1\|WP_003600616.1\|35532_36042_+\|DUF308-domain-containing-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	5.84917e-05
NZ_CP017266.1\|WP_096836734.1\|25849_26637_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.77308e-22
NZ_CP017266.1\|WP_002819873.1\|24937_25219_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	2.03159e-12
NZ_CP017266.1\|WP_096836730.1\|18269_20330_-\|MobA/MobL-family-protein	gnl\|CDD\|367473	pfam03389, MobA_MobL, MobA/MobL family. This family includes of the MobA protein from the E. coli plasmid RSF1010, and the MobL protein from the Thiobacillus ferrooxidans plasmid PTF1. These sequences are mobilisation proteins, which are essential for specific plasmid transfer.	5.74613e-103
NZ_CP017266.1\|WP_096836728.1\|15524_16436_-\|cysteine-synthase-family-protein	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	2.05324e-140
NZ_CP017266.1\|WP_096836465.1\|33621_34638_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	4.13267e-65

>NZ_CP017266.1|WP_016386331.1|26777_28253_-|primase-C-terminal-domain-containing-protein
MDVLGAANLSEAAIVAILHHGLARSKYKHSQLRPEDRQGARPTGAIFLTRTKDDLREAIGFVATSQEAVLDNETCSHWTPNIFRFGTYADRRCHVLKGHSEDNLKQINTFVVDADFGSGKPSYDTALLNKFILNQNDQQELWPTLVLETPHGYQAYYVLDRPVFVRRTGDQLPAVTAAKRVSEALRAAVAKDLPQVDVGANHFGFFRKPSEENVCFFEPALTHDFGDLQDWTKLQHLTFHHDNKAHYPVKQTDQPWFIALTHAQVPRGDGMLGRNNTLLTLCLAGYSSGWSAEDAYDFADQWNTDQREPLSDQEVRRIIRSAFSGKYQGASAAYIAELTATYTPDAPKTTGPQVWHKHAKPRTERKYSHLQEWAGDLVAYVVERAGQAVDQIKVTTRELRDQLGISSQMLTKVLAYVADYGLLKVVKQYGRHGGLYLTTRQMLGRQLQLDRRAQAISWHDFVTGQLRGQAQKEVVNGQVSLLPETLTRSGP
>NZ_CP017266.1|WP_096836734.1|25849_26637_-|IS5-family-transposase
MADYPSNISRAQFALIQPDLENFRKHTRPRRYDLYDVFNAILYSLTTGCQWRELPHDFPEWHTVYRYYDMWRDKPDPTADSLLERLLKKPVASYRFAQGRSARTSFVIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRPGALAMFSLASQNLELFQHVMVDGGYTGNDFADQVKLILNAKTTVAKRNELHMFTVLPQRWIVERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
>NZ_CP017266.1|WP_002819873.1|24937_25219_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MAVKEKKRVQVKIDKDLADDTEAVLSELGLNPTTAINMFYKRIVANGALPFNASLSEEERANLRFLKATEGTPVTEFKDAKEVADWLNDPDED
>NZ_CP017266.1|WP_096836732.1|24465_24948_-|hypothetical-protein
MRTNDLVSLYVSFVETNGGKSRPVLIRRVSEQTVEAFKITSQYEKKSAYIKQQYYPIQDWQSAGLKKPSWVDLGNIYRFPKAGLNFKEIGHLSKLDQNKISDFTLDLKSKRRGKGQKIIQQRSSKRKHKESKAELTQRIQKQLKDFAKKLFSIFDFDPII
>NZ_CP017266.1|WP_003603786.1|22303_23212_-|magnesium-transporter-CorA-family-protein
MIKPEKTINGTKWIETIQINAEERATLEDQYGIDENIIEYVTDNDESTNYVYDINEDDQLFIFLAPYALDKDALRYITQPFGMLLHKGVLFTFNQSHIPEVNTALYSALDNPEVKSVDAFILETLFTVVDSFIPISRGITKKRNYLDKMLNRKTKNSDLVSLSYLQQTLTFLSSAVQTNLSELDRLPKTHFGVGADQDKIDLFEDVQIEGEQVQRMFEIETQVVDRIDHTFNSLANNNLNDTMKFLTIWSLTMAVPTIITGFYGMNVKLPLAGMQYAWMLTLGISVALIVAMLIMLKVWRKM
>NZ_CP017266.1|WP_003603789.1|20831_21110_+|hypothetical-protein
MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQADNLSVEQTEELLKTFADYVNAHKPDKLKNDQPNN
>NZ_CP017266.1|WP_080638569.1|20581_20809_+|hypothetical-protein
MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQSNLDYANLSNDQIKILAKQFSEFLKVKSVDH
>NZ_CP017266.1|WP_096836730.1|18269_20330_-|MobA/MobL-family-protein
MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKEGRRYFYARSVIPESFILTPKNAPSWASDREKLWNEVEKNDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDQGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGSWGLKAKTQYIKDENGKQLLTKSGFPKQRKIWLVDWDKKEKINEWRHNWATSVNQFLAQKNIPDRISEKSFVYQGIQETPTQHEGINSQRKNRKAFNQQVRAQRNTQAKYHNFDEKIRNHEHFDALTDELSFSEKHTISHLSQQLKTYVDLEHLDDKQRMLFNWKNSLLIKHAIGEDVTKQLLTIDQQTTSLAQANQLLNKVVERATKKLYPELNFEQTTAAERRELIKETNSEQTIFKGSELAERLADIRSDLLTQQILTFTKRPYTSWQLVNQQAQTIEKQLTTVLAKHGHQLDDLKHTDRGMLAAYQPNELEFISKAVKNLRVMREVKAVVQTQYNSILTTAFPDSDLDKLETIDKEQIYTAVVYYDPELKPLSADDLSQLQQQPPVVFTSQQHQAGLNYLLGKMELKDIQDHRLQRVLKHDGTRQLFIGECGQDPKLDHKQIEMVQARLKQQTTRFDQYKQDQIKDYQAINYYPTSPKNYLTNILDEALITILYAKNTDYLRKQQLRGLKENEWEMTKKQRQHQTRNRHEDGGMHL
>NZ_CP017266.1|WP_050894563.1|17048_17978_-|IS30-like-element-ISLpl1-family-transposase
MSSITYSERIKIETFCELGLSNIQMGVRLNRSPSTISYELSRCQPYQAELAQTDAEYKRSRCGRKTKLSDELKQKILNHLRLSWSPGMIAHEFKLATKSIYNWLNQGRIGFSLNDLPEHGVRQRRNVDQRSKYNQSLGRSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAVLLTLIDRKSRFLWACRLKDRTTATVNEALTKFLTTFNGPVHSFTVDRGTEFSGLVSLESQYGIKAYYCHAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
>NZ_CP017266.1|WP_096836728.1|15524_16436_-|cysteine-synthase-family-protein
MLIHSISELIGHTLLIDLQINIPNHSHIYAKLEMFNPGGSIKDRLGQYMIQDAINRGQVTEGVTTIIEPTAGNTGIGVALAAQQHHLSTILVVPEKFSFEKQQLMKALGAKLINTPSDQGIKGAIEKAEALHDQTPNSFVPMQFKNPANPDTYYHTLAPELLDDLNDPIDAFVAGAGSGGTFAGVARYLKEQNPATQTIVVEPEGSILNGGPAHPHRTEGIGVEFVPPFFKDVQIDKTLTIADADAFHQVKELAKKQGLFIGSSSGAALAASLKVAKALPENSTIVTIFPDSSERYMSENIYD
>NZ_CP017266.1|WP_003582592.1|28966_29848_+|AAA-family-ATPase
MQSKLNLKRPLTITVANAKGGVGKTTITRYLPYDLAERGYKVLVIDADPQANLTKSMGITKQQHDPDNIFTIDKSMMAAVRDGSFKGAVLEIVPNLYELPSQIDFRGFETFLSKKYGVAEKGDPEYLSVESKKVSLLKGLIEPIKADYDFVFIDTPPTAGQYVRNATFASDYVIIAFQTQSDSLDGAIQFISDDLTELVETFGARTDVLGILPNQVSKSGAIDQVVIKDAIARFGQQNLFDHIIPFARRIQAAPRMGLSRQGYWNQKLFDDIVDPLTDDFLQRLKIVGEVTNG
>NZ_CP017266.1|WP_003582590.1|29840_30227_+|hypothetical-protein
MADTKKNTIGFFNKEKKHSPDMAYKEDIPVKETYKGSGLKAFDPSAEKKTTPVTHKVKDARRTIRIPRQQYYELLALLELSPNKYVYELIAELVDRAVKEISTDRPDELRLYQQAIERIKATDERRSR
>NZ_CP017266.1|WP_096836735.1|30534_31322_-|IS5-family-transposase
MPDYPSNISRAQFALIQPDLENFRKHTRPRRYDLYDVFNAILYSLTTGCQWRELPHDFPEWHIVYRYYDMWRDKPDPTADSLLERLLKKPVASYRFAQGRSARTSFVIVDAQSVKTTDLTKNSGYDGGKKISGIKRHMAVDINGLPQAILVTRANVSDRSGALAMFSLASQNLELVQHVMVDGGYTGNDFADQVKLILNAKTMVAKRNELHTFTVLPQRWIIERSWSWLDKCRRLWKNCERALNSSLQMVVLAFLKIVLKRY
>NZ_CP017266.1|WP_016386062.1|31668_32226_-|hypothetical-protein
MAEKYTAEIVPLNAEKIGTAPHGAATFTIDGAQMKIHIDMFDTPANVQHWEHFHGFPDGKPAEIATAAQDANGDGFVDLPETEPVSGTTMVPFDAEPAKMHVPNDSYPVADAEGHYAYDKLVDLKELQTAFKAAFGSDDLQLDKRVIYIHGVPDTLKLPATVQGTVMNYDAHVTLPIAVGKISKA
>NZ_CP017266.1|WP_096836737.1|32320_33190_-|DUF2075-domain-containing-protein
MKPTPFINAYRKAGKRADVVLIDEGHLLLTTPDPYNKFRGHNQLADILQLARVVVLVFDFHQLVKLKSFWTPALLKRVTRDYAVTYYHLTEQMRGGDAAVNDWIDHFVRGKVLPLPHPQHFDFQVFSDGQPMYDLIQRCNAETGLSRMIATADYPFTVLDGKTWYVQAGSLRLPWDKLNFTDRPWAQRPETLHEVGSIYTIQGFDLNYAGVILGPSLGYDPSKDRLTVDLAQYQDKEAFKKRPDLADTTDAKAAIIMNAINILLKRAKHGLYLYAADPALRQRLLQLAK
>NZ_CP017266.1|WP_096836465.1|33621_34638_+|IS30-family-transposase
MTHSQTNTHKHYQQLSFSDRATIQALQAAGDTATVIAQKLHRSKATISREITRGSVTQLDSKRHSHQVYLAETAQAMHDRKRDRTGHYAFLKTGRAFFKALARELTRKPRVHSVDSFVHFYRDQGKPCPSTTTVYRYIDAGLLELDNMTLPKKLRRRIKGYKNAHKRKNKKIYGDSIELRPAAVNDRTGVGHWEGDLVKGIRLADEPALMTLTERYSRTEIIVKIPDYHAGTCLKALQDTIDDYGAKEFESITFDNGSEFAKLSEIVGTQIYFAHPYSPWERGTNENANGLLREFFPKGKSLRAVTLVEIQAVQSALNHRPRRILNYLRPCDYYRCMA
>NZ_CP017266.1|WP_003600616.1|35532_36042_+|DUF308-domain-containing-protein
MNKLLDRFDPFMFVVGILSIFVAVISLRNPLATFSAVVVIAAITAILSGIYKLTVLRGALENSGWVVFNAVVDIIIGILMLFNGEFGILFVAISFAIMFLMDSIISLWLSNIIKLVNEKYFMVDVILSVIGIILGVLLLIYPAFSILSIYYLVGLFFMITGISAIIHSI
>NZ_CP017266.1|WP_096836738.1|36242_37163_-|IS30-family-transposase
MAIITLIERSQIELMQHHTIQYIAATLGRSRISIRHELHRCPEGDYCAIIAQDHADTCRHRCGRHSILTPKLKRMVTEKLNLGWSPEMVGYAVHCAPHTIYHWIYQRQVDFQPSQLFDHGKRHKRRQDLRSRYNQAVGTSIEIRSESANRRTEKGHLEMDTVRGGRGSKAAVLTIVDRVTRLMATTKLENLSQNAVLKGFARLMVDFPGPVRSVTVDHGKEFSCDQALTKRYRIPVYFCHAYHPNERGTNERFNRELRYYFPKGTQFEQVSETDIQQATALINNKPRKCLRWQTPVQAVSKPLSRW
>NZ_CP017266.1|WP_096836740.1|37276_38452_-|IS256-family-transposase
MNELTTEIIAALAQKQDLDEVFRHHLEIAINQLLQTELAEFLGYERYSYAGINTGNNRNGSYERSFDTKYGQLDLTIPRDRNGRFENHTLPAYGRHSDNLETTVIQLYTRGITTAEIAELIEKMYGAHYSKVTVSNMTKAVNEQVQAFQQRRLASQYAAIFLDATYLPLKRDTVQKEAVHIAIGIRPDGTKEVLNYQVAPTESTGIWTELLGTLIKQGVKDVLLFVADGLVGLDEGLNRHFPKAKRQRCLVHVGRNLMNKVRVKDRKAVISDFKQVHRAANREAAELKLNEFANNWHQTYPKLIKDLLKMPNLLTFMDFPPAIRQSIYSTNLIENFNKHLKRTTHHKEQFPTEDSLDRFLVSQFNVYNEKSLKRIHRGYKGLQDPLEASFI
>NZ_CP017266.1|WP_002816607.1|39071_39755_+|IS6-family-transposase
MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017266_1	1.1\|28722\|48\|NZ_CP017266\|CRISPRCasFinder	28722-28769	48	NZ_CP044366	Lactobacillus paracasei strain TD 062 plasmid unnamed5, complete sequence	6480-6527	0	1.0
NZ_CP017266_1	1.1\|28722\|48\|NZ_CP017266\|CRISPRCasFinder	28722-28769	48	NZ_CP017266	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.25, complete sequence	28722-28769	0	1.0
NZ_CP017266_1	1.1\|28722\|48\|NZ_CP017266\|CRISPRCasFinder	28722-28769	48	NZ_CP012189	Lactobacillus paracasei strain CAUH35 plasmid unnamed2, complete sequence	18322-18369	0	1.0
NZ_CP017266_1	1.1\|28722\|48\|NZ_CP017266\|CRISPRCasFinder	28722-28769	48	NZ_CP014986	Lactobacillus paracasei strain IIA plasmid unnamed1, complete sequence	9096-9143	1	0.979
NZ_CP017266_1	1.1\|28722\|48\|NZ_CP017266\|CRISPRCasFinder	28722-28769	48	NZ_CP031786	Lactobacillus paracasei strain 10266 plasmid pLP10266, complete sequence	17784-17831	1	0.979
NZ_CP017266_1	1.1\|28722\|48\|NZ_CP017266\|CRISPRCasFinder	28722-28769	48	NZ_CP039709	Lactobacillus paracasei strain Lp02 plasmid pLp02-2, complete sequence	42802-42849	1	0.979

1. spacer 1.1|28722|48|NZ_CP017266|CRISPRCasFinder matches to NZ_CP044366 (Lactobacillus paracasei strain TD 062 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	CRISPR spacer
acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	Protospacer
************************************************

2. spacer 1.1|28722|48|NZ_CP017266|CRISPRCasFinder matches to NZ_CP017266 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.25, complete sequence) position: , mismatch: 0, identity: 1.0

acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	CRISPR spacer
acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	Protospacer
************************************************

3. spacer 1.1|28722|48|NZ_CP017266|CRISPRCasFinder matches to NZ_CP012189 (Lactobacillus paracasei strain CAUH35 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	CRISPR spacer
acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	Protospacer
************************************************

4. spacer 1.1|28722|48|NZ_CP017266|CRISPRCasFinder matches to NZ_CP014986 (Lactobacillus paracasei strain IIA plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.979

acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	CRISPR spacer
acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcag	Protospacer
***********************************************

5. spacer 1.1|28722|48|NZ_CP017266|CRISPRCasFinder matches to NZ_CP031786 (Lactobacillus paracasei strain 10266 plasmid pLP10266, complete sequence) position: , mismatch: 1, identity: 0.979

acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	CRISPR spacer
acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcag	Protospacer
***********************************************

6. spacer 1.1|28722|48|NZ_CP017266|CRISPRCasFinder matches to NZ_CP039709 (Lactobacillus paracasei strain Lp02 plasmid pLp02-2, complete sequence) position: , mismatch: 1, identity: 0.979

acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcat	CRISPR spacer
acacatttgtacatttacatatatgtaaatgtgtaaaaatatccgcag	Protospacer
***********************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 10662

Lactobacillus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_191982459.1\|861_7935_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_096836724.1\|8259_8511_+\|transposase	transposase	Q6J1X3	Lactobacillus_phage	3.5e-37	95.2
WP_123018149.1\|8672_9695_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	2.6e-126	98.2
WP_080555491.1\|9694_9892_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096836653.1\|9978_10662_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.8e-59	51.3

DBSCAN-SWA_2

15524 : 17978

Lactococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836728.1\|15524_16436_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	1.0e-57	41.0
WP_050894563.1\|17048_17978_-\|transposase	IS30-like element ISLpl1 family transposase	H7BW47	unidentified_phage	3.0e-25	34.4

DBSCAN-SWA_3

28966 : 29848

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003582592.1\|28966_29848_+	AAA family ATPase	F0PIG8	Enterococcus_phage	5.0e-38	35.6

DBSCAN-SWA_4

33621 : 39755

Staphylococcus_prophage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836465.1\|33621_34638_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.9e-33	32.5
WP_003600616.1\|35532_36042_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_096836738.1\|36242_37163_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	3.4e-37	35.0
WP_096836740.1\|37276_38452_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.8e-27	29.2
WP_002816607.1\|39071_39755_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.1e-60	51.8

DBSCAN-SWA_5

44212 : 45388

Staphylococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003561746.1\|44212_45388_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.8e-27	29.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP017264

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8997 : 68399

Staphylococcus_phage(25.0%)

transposase,holin,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079322958.1\|8997_9294_+\|transposase	transposase	NA	NA	NA	NA
WP_096836680.1\|9290_10154_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	6.9e-24	30.1
WP_010493218.1\|12915_13020_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_049146552.1\|13174_13564_-	hypothetical protein	NA	NA	NA	NA
WP_019875541.1\|13863_14745_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_011674173.1\|14761_15121_+	transcriptional regulator	NA	NA	NA	NA
WP_019875535.1\|16014_16245_+	hypothetical protein	NA	NA	NA	NA
WP_049146560.1\|16861_18796_+	transcription antiterminator	NA	NA	NA	NA
WP_012807366.1\|18795_19233_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_012807367.1\|19246_19567_+	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_012807368.1\|19581_20709_+	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_096836683.1\|20711_23306_+	glycosyl hydrolase family 38	NA	NA	NA	NA
WP_012807370.1\|23427_24291_+	glucose transporter GlcU	NA	NA	NA	NA
WP_183406792.1\|25342_25639_+	hypothetical protein	NA	NA	NA	NA
WP_016381850.1\|26337_28053_+	site-specific DNA-methyltransferase	S5VTV9	Campylobacter_phage	2.9e-42	34.5
WP_016381849.1\|28057_30667_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_003577187.1\|31003_32419_+\|transposase	IS5-like element ISLca2 family transposase	NA	NA	NA	NA
WP_060612723.1\|32584_34000_+\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	6.0e-09	25.6
WP_050569250.1\|34053_36123_+	DEAD/DEAH box helicase family protein	E5EQY5	Bathycoccus_sp._RCC1105_virus	1.2e-18	27.4
WP_049162374.1\|36240_36813_+	hypothetical protein	NA	NA	NA	NA
WP_016381847.1\|36954_37494_+	helix-turn-helix domain-containing protein	A0A139ZPK3	Marinitoga_camini_virus	9.7e-08	49.2
WP_016381846.1\|37793_38129_-	hypothetical protein	NA	NA	NA	NA
WP_096836686.1\|39997_42070_+	family 31 glucosidase	NA	NA	NA	NA
WP_016381843.1\|42069_42855_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_016381842.1\|42847_43660_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_016381841.1\|43675_44161_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_016381840.1\|44175_44586_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_016381839.1\|44634_45804_+	ROK family transcriptional regulator	NA	NA	NA	NA
WP_002816607.1\|46044_46728_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.1e-60	51.8
WP_032766659.1\|47757_48342_-	hypothetical protein	NA	NA	NA	NA
WP_003603542.1\|48362_48842_-	hypothetical protein	NA	NA	NA	NA
WP_003663168.1\|48854_50249_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_003603544.1\|50230_50542_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_162137657.1\|51292_51541_+\|bacteriocin	class IIc cyclic bacteriocin	NA	NA	NA	NA
WP_016377575.1\|51614_52112_+	hypothetical protein	NA	NA	NA	NA
WP_018041653.1\|52127_52625_+	stage II sporulation protein M	NA	NA	NA	NA
WP_003603547.1\|53242_54412_-	ABC transporter permease	NA	NA	NA	NA
WP_003603548.1\|54411_55092_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.1e-32	35.1
WP_003603550.1\|55088_56144_-	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_016377574.1\|56448_56946_+	DUF536 domain-containing protein	NA	NA	NA	NA
WP_018041624.1\|57234_57333_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_002816607.1\|57980_58664_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.1e-60	51.8
WP_045137359.1\|58791_59025_-	hypothetical protein	NA	NA	NA	NA
WP_012778337.1\|59045_59777_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	6.1e-13	30.7
WP_096836689.1\|59778_60600_-	cobalt ABC transporter permease	NA	NA	NA	NA
WP_016377519.1\|60574_61561_-	cobalt transporter CbiM	NA	NA	NA	NA
WP_045137360.1\|61575_62241_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003641711.1\|62493_63768_+	nickel-dependent lactate racemase	NA	NA	NA	NA
WP_096836692.1\|63769_64510_+	nickel pincer cofactor biosynthesis protein LarB	A0A288TYA6	Enterococcus_phage	4.7e-21	47.2
WP_029327658.1\|64540_65803_+	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA
WP_003643656.1\|65807_66524_+	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	4.1e-22	33.6
WP_014566892.1\|66548_67379_+	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA
WP_096836695.1\|67715_68399_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.6e-60	51.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP017265

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017265_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017265_1

26468-26569

Orphan

Consensus_repeat	Method
GTCTATTTTTTAGACTTTCGCTCGTAGCAAGGGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017265_1

>merge|NZ_CP017265|1|26468-26569|CRISPRCasFinder
GTCTATTTTTTAGACTTTCGCTCGTAGCAAGGGTTTGCGGGGTGTCATCAACGGACTTTCGCGAAGGTCTATTTTTTAGACTTTCGCTCGTAGCAAGGGTTT

>NZ_CP017265|1|1|26468-26569|CRISPRCasFinder
GTCTATTTTTTAGACTTTCGCTCGTAGCAAGGGTTT	GCGGGGTGTCATCAACGGACTTTCGCGAAG
GTCTATTTTTTAGACTTTCGCTCGTAGCAAGGGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017265.1\|WP_003555660.1\|24401_24629_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_014216278.1\|24651_24930_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_003712735.1\|20320_20683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_096836721.1\|22089_24150_-\|MobA/MobL-family-protein	unknown	unknown	gnl\|CDD\|367473
NZ_CP017265.1\|WP_084988379.1\|21040_21655_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_096836719.1\|21693_22005_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_096836716.1\|20703_21039_-\|CagC-family-type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|374896
NZ_CP017265.1\|WP_003712726.1\|19692_20352_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273346
NZ_CP017265.1\|WP_010620892.1\|25006_25192_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_084988385.1\|27546_27924_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_010492168.1\|27939_28215_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017265.1\|WP_003660204.1\|25238_25520_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102

Protein	Function_ID	Function_description	E-value
NZ_CP017265.1\|WP_003712726.1\|19692_20352_-\|hypothetical-protein	gnl\|CDD\|273346	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family. Type IV secretion systems are found in Gram-negative pathogens. They export proteins, DNA, or complexes in different systems and are related to plasmid conjugation systems. This model represents related ATPases that include VirB4 in Agrobacterium tumefaciens (DNA export) CagE in Helicobacter pylori (protein export) and plasmid TraB (conjugation).	0.0066353
NZ_CP017265.1\|WP_096836721.1\|22089_24150_-\|MobA/MobL-family-protein	gnl\|CDD\|367473	pfam03389, MobA_MobL, MobA/MobL family. This family includes of the MobA protein from the E. coli plasmid RSF1010, and the MobL protein from the Thiobacillus ferrooxidans plasmid PTF1. These sequences are mobilisation proteins, which are essential for specific plasmid transfer.	6.97444e-106
NZ_CP017265.1\|WP_096836716.1\|20703_21039_-\|CagC-family-type-IV-secretion-system-protein	gnl\|CDD\|374896	pfam16943, T4SS_CagC, Cag pathogenicity island, type IV secretory system. T4SS_CagC is a family of putative pathogenicity island, type IV, conjugal DNA-protein transfer, secretory system proteins from Gram-negative bacteria.	4.55502e-42
NZ_CP017265.1\|WP_003660204.1\|25238_25520_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	2.54701e-12

>NZ_CP017265.1|WP_003660204.1|25238_25520_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MAVKEKKRVQVQIDKELADNTEAVLSQLGLNPTTAINMFYKRIVANGALPFNVSLSEEERANLRFLKATKETPVTEFKDAKEVADWLNDPDED
>NZ_CP017265.1|WP_010620892.1|25006_25192_-|hypothetical-protein
MKDTITINDFFEIAKETDLKDLLDKSLHEPDPEKRKVYDALYTYFLDKRQDEVIKRKDFVR
>NZ_CP017265.1|WP_014216278.1|24651_24930_+|hypothetical-protein
MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYENRQARKARSRRLIQKGALLEKYFQANNLSVEQTEELLKIFADYVNAHKPDKLKNDQPNN
>NZ_CP017265.1|WP_003555660.1|24401_24629_+|hypothetical-protein
MIGGIVMSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDQIKLLAKQFSEFLKVKSVDH
>NZ_CP017265.1|WP_096836721.1|22089_24150_-|MobA/MobL-family-protein
MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKEGRHYFYARSVMPESFILTPKNAPEWASDREQLWNEVEKKDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGQKTKTEYILDSHGNKTKTPAGNVRNRKIWLVDWDKKEKITEWRHNWAVSVNQVLEQKNIPDRISEKSFENQGIDEVPTQHEGINSKRHERKEFNQQVKDYRKAKASYKNNQEKAINRGHLDSLSKHFSFNEKRVVKELSHELKTYISLENLDDKRRMLFNWKNSTLIKHAVGEDVTKQLLTINQQESSLKKADELLNKVVDRTTKKLYPELNFEQTTQAERRELIKETDSEQTVFKGSELNERLMNICDDLLTQQLLTFTKRPYVGWKLLMQQEKEVKIELKYTLMIHDDNLESLEHVDQGLLEKYSPIEQQKITRAVKDLRTIMAVKQVIQTQYHEVLKRAFPKGDLDGLPLTKQEQAYTAVMYYDPTLKPLKVETMEQWQSNPPQVFSTQEHQLGLAYLSGQLSLDQLENHHLQRVLKHDGTKQLFFGECKVDPTIKNSQIEKIQKQLKEQQAKDDQYRKANIGHYQPLNYKPVSPSYYLKTAFSDAIMTVLYARDEDYQRQKQERGLKETEWEMTKKQRQHQTRNRHEDGGMHL
>NZ_CP017265.1|WP_096836719.1|21693_22005_-|hypothetical-protein
MARQNKWISLSQAGIKLGHDRSYVSLWLRRHPNSMPEEYLMETGTVKLISLEGIEWIKKQSKKEGVLVSNSSANGDQHLESQLLGVTLLTIHFTGRVRGKLVV
>NZ_CP017265.1|WP_084988379.1|21040_21655_-|hypothetical-protein
MKVESWQGINGKLVHDDQKAIVVKDEQELADQDKLQDRLKQEGKPVDEVRKALIKNTVKRQIKTDPLKISSWFNRHQDSKNAKKTEKLVSDKPTHQYKQIKNELTFFGESFLEGFLGFYGLEVDNALGRYEHNLHVLETQELGQSEKEYYLATSENGRVKLATDPLPSQQIAEEQLNKFYQREPEETQAEQLQLRTSEDDRKEE
>NZ_CP017265.1|WP_096836716.1|20703_21039_-|CagC-family-type-IV-secretion-system-protein
MKFSKVKALATTGATAIYLGLMNAQVVLAADGGEVKSKLTSAGKTIQGILTGLVVLVGICVALFIIIKRIPDADDPREKSEVYHAVGRVAGLVALAAAIIWILPWVYSLFT
>NZ_CP017265.1|WP_003712735.1|20320_20683_-|hypothetical-protein
MKKGKEFIFPENVDKDYGIWKDYTLKDFGYAALAGLVGLIFIAIPPYGLILVLIKIVIVVLAMTIVMAILTIRPVAARKNIKVRDNFNLKRRYANGQKLFYLKPKKRGELNAFEKEQNRQ
>NZ_CP017265.1|WP_003712726.1|19692_20352_-|hypothetical-protein
MRLKKSKTANKTAKLDWDYQPPKINGGKETIDDMSLVVGMYGNYEVTKTGNLVGILEVSGINLDLLNETEQQDVFEDYGAFLMSTLGEGVDDTLQFLEPTIPVNMTAYLNGLKRRYLALQKGHPEQQFKIQLIASYLDHFTKVQESKNMTTKQHLLIVKVPIKDKSVKSLNLAVTHLDEKIEQVKRDIENALTDFDVTAKVLTSQEVQEILKNLINFNG
>NZ_CP017265.1|WP_084988385.1|27546_27924_-|hypothetical-protein
MGIPISVIFLFTSLIVFWIIPGIGIAKNHLVDDRFFIRQWLFPMQYWLQLLFERISGNRRIVVRILQIMSLFITYFCGLLMLLVFSAFDINTAKHFSVFILFEYLLVSSIAYWFQPKAGKIYKTK
>NZ_CP017265.1|WP_010492168.1|27939_28215_-|hypothetical-protein
MGKVKTLNVRLNPEKIVDKEILDYFDKSLIPKTTLVKTALIHEIERLKAQGDPYVKDEIKAPEAPKNSTESPSNSKERLQGGFNAFSDNDI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP014913	Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence	22508-22537	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP017358	Lactobacillus plantarum strain TMW 1.25 plasmid pL125-4, complete sequence	4830-4859	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP017368	Lactobacillus plantarum strain TMW 1.277 plasmid pL1277-5, complete sequence	5770-5799	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP017265	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.24, complete sequence	26504-26533	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP017960	Lactobacillus plantarum strain C410L1 plasmid unnamed6, complete sequence	6891-6920	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP017960	Lactobacillus plantarum strain C410L1 plasmid unnamed6, complete sequence	20910-20939	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP014934	Pediococcus claussenii strain TMW 2.53 plasmid pL253-1, complete sequence	5933-5962	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP014937	Pediococcus claussenii strain TMW 2.54 plasmid pL254-1, complete sequence	5934-5963	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	MK994179	Lactobacillus plantarum strain PC518 plasmid plp75TA, complete sequence	4885-4914	0	1.0
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NC_014386	Lactobacillus helveticus R0052 plasmid pIR52-1, complete sequence	1748-1777	1	0.967
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP019583	Lactobacillus helveticus strain LH5 plasmid pCBTLH5_2, complete sequence	4638-4667	1	0.967
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NC_006529	Lactobacillus salivarius UCC118 plasmid pSF118-20, complete sequence	4742-4771	1	0.967
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP019033	Lactobacillus fermentum strain SNUV175 plasmid pSNU175-4, complete sequence	21083-21112	2	0.933
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NC_017468	Lactobacillus helveticus H10 plasmid pH10, complete sequence	15844-15873	2	0.933
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP033891	Lactobacillus plantarum strain LMT1-48 plasmid p_3, complete sequence	3330-3359	2	0.933
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP011537	Lactobacillus fermentum 3872 plasmid pLF3872, complete sequence	7181-7210	2	0.933
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NC_017017	Pediococcus claussenii ATCC BAA-344 plasmid pPECL-6, complete sequence	5387-5416	3	0.9
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP014928	Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-4, complete sequence	6824-6853	3	0.9
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP014920	Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-5, complete sequence	12632-12661	3	0.9
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP047125	Lactobacillus hilgardii strain FLUB plasmid unnamed4	5237-5266	3	0.9
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NZ_CP031200	Lactobacillus brevis strain UCCLBBS449 plasmid pUCCLBBS449_B, complete sequence	39624-39653	3	0.9
NZ_CP017265_1	1.1\|26504\|30\|NZ_CP017265\|CRISPRCasFinder	26504-26533	30	NC_008498	Lactobacillus brevis ATCC 367 plasmid 1, complete sequence	8762-8791	4	0.867

1. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP014913 (Lactobacillus paracollinoides strain TMW 1.1979 plasmid pL11979-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

2. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP017358 (Lactobacillus plantarum strain TMW 1.25 plasmid pL125-4, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

3. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP017368 (Lactobacillus plantarum strain TMW 1.277 plasmid pL1277-5, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

4. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP017265 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.24, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

5. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP017960 (Lactobacillus plantarum strain C410L1 plasmid unnamed6, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

6. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP017960 (Lactobacillus plantarum strain C410L1 plasmid unnamed6, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

7. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP014934 (Pediococcus claussenii strain TMW 2.53 plasmid pL253-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

8. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP014937 (Pediococcus claussenii strain TMW 2.54 plasmid pL254-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

9. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to MK994179 (Lactobacillus plantarum strain PC518 plasmid plp75TA, complete sequence) position: , mismatch: 0, identity: 1.0

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcatcaacggactttcgcgaag	Protospacer
******************************

10. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NC_014386 (Lactobacillus helveticus R0052 plasmid pIR52-1, complete sequence) position: , mismatch: 1, identity: 0.967

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcgggttgtcatcaacggactttcgcgaag	Protospacer
***** ************************

11. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP019583 (Lactobacillus helveticus strain LH5 plasmid pCBTLH5_2, complete sequence) position: , mismatch: 1, identity: 0.967

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcgggttgtcatcaacggactttcgcgaag	Protospacer
***** ************************

12. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NC_006529 (Lactobacillus salivarius UCC118 plasmid pSF118-20, complete sequence) position: , mismatch: 1, identity: 0.967

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacggactttcgcgaag	Protospacer
**********.*******************

13. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP019033 (Lactobacillus fermentum strain SNUV175 plasmid pSNU175-4, complete sequence) position: , mismatch: 2, identity: 0.933

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggagtgtcgtcaacggactttcgcgaag	Protospacer
****.*****.*******************

14. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NC_017468 (Lactobacillus helveticus H10 plasmid pH10, complete sequence) position: , mismatch: 2, identity: 0.933

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaag	Protospacer
**********.******.************

15. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP033891 (Lactobacillus plantarum strain LMT1-48 plasmid p_3, complete sequence) position: , mismatch: 2, identity: 0.933

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaag	Protospacer
**********.******.************

16. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP011537 (Lactobacillus fermentum 3872 plasmid pLF3872, complete sequence) position: , mismatch: 2, identity: 0.933

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggagtgtcgtcaacggactttcgcgaag	Protospacer
****.*****.*******************

17. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NC_017017 (Pediococcus claussenii ATCC BAA-344 plasmid pPECL-6, complete sequence) position: , mismatch: 3, identity: 0.9

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaac	Protospacer
**********.******.***********

18. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP014928 (Lactobacillus paracollinoides strain TMW 1.1995 plasmid pL11995-4, complete sequence) position: , mismatch: 3, identity: 0.9

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaac	Protospacer
**********.******.***********

19. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP014920 (Lactobacillus paracollinoides strain TMW 1.1994 plasmid pL11994-5, complete sequence) position: , mismatch: 3, identity: 0.9

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaat	Protospacer
**********.******.***********

20. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP047125 (Lactobacillus hilgardii strain FLUB plasmid unnamed4) position: , mismatch: 3, identity: 0.9

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaac	Protospacer
**********.******.***********

21. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NZ_CP031200 (Lactobacillus brevis strain UCCLBBS449 plasmid pUCCLBBS449_B, complete sequence) position: , mismatch: 3, identity: 0.9

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gcggggtgtcgtcaacgaactttcgcgaat	Protospacer
**********.******.***********

22. spacer 1.1|26504|30|NZ_CP017265|CRISPRCasFinder matches to NC_008498 (Lactobacillus brevis ATCC 367 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.867

gcggggtgtcatcaacggactttcgcgaag	CRISPR spacer
gtggggtgtcgtcaacgaactttcgcgaac	Protospacer
*.********.******.***********

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP017263

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017263_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017263_1

24483-24628

Orphan

Consensus_repeat	Method
GCGGGCGACCGATTTTCGGTTTCCCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP017263_1

>merge|NZ_CP017263|1|24483-24628|CRISPRCasFinder
GATCGTGACCGATTTTCGGTTTCCCGCTATTTTCAAGGGGTCCGGCTTCACTTGAGTTCTTATGTCGCGGGCGACCGATTTTCGGTTTCCCGCTGTTTTCGGTAGTTTGAACGGTCTCTTGCGGGCGACCGATTTTCGGTTTCCCG

>NZ_CP017263|1|1|24483-24628|CRISPRCasFinder
GATCGTGACCGATTTTCGGTTTCCCG	CTATTTTCAAGGGGTCCGGCTTCACTTGAGTTCTTATGTC
GCGGGCGACCGATTTTCGGTTTCCCG	CTGTTTTCGGTAGTTTGAACGGTCTCTT
GCGGGCGACCGATTTTCGGTTTCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017263.1\|WP_010620892.1\|21763_21949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017263.1\|WP_010014831.1\|21995_22277_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_CP017263.1\|WP_020751804.1\|26732_27095_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017263.1\|WP_002816607.1\|34060_34744_+\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP017263.1\|WP_020751805.1\|25496_26264_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_CP017263.1\|WP_096836645.1\|14153_14639_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_CP017263.1\|WP_096836653.1\|23163_23847_+\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP017263.1\|WP_096836648.1\|18256_20317_-\|MobA/MobL-family-protein	unknown	unknown	gnl\|CDD\|367473
NZ_CP017263.1\|WP_016377552.1\|31894_33310_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290319
NZ_CP017263.1\|WP_016370074.1\|26274_26658_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017263.1\|WP_070792629.1\|20818_21097_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017263.1\|WP_183406791.1\|20568_20796_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017263.1\|WP_096836659.1\|31015_31771_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017263.1\|WP_016372361.1\|16617_17175_-\|YdhK-family-protein	unknown	unknown	gnl\|CDD\|369427
NZ_CP017263.1\|WP_002816607.1\|27401_28085_+\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP017263.1\|WP_123018129.1\|28195_28990_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP017263.1\|WP_096836651.1\|21086_21767_-\|zeta-toxin-family-protein	unknown	unknown	gnl\|CDD\|226648
NZ_CP017263.1\|WP_096836656.1\|29194_30874_+\|D-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|236872
NZ_CP017263.1\|WP_003592282.1\|34935_35886_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP017263.1\|WP_016383003.1\|17356_17608_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200

Protein	Function_ID	Function_description	E-value
NZ_CP017263.1\|WP_002816607.1\|27401_28085_+\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.4394e-66
NZ_CP017263.1\|WP_002816607.1\|34060_34744_+\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.4394e-66
NZ_CP017263.1\|WP_020751805.1\|25496_26264_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.43215e-58
NZ_CP017263.1\|WP_003592282.1\|34935_35886_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	6.50137e-75
NZ_CP017263.1\|WP_096836653.1\|23163_23847_+\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.06777e-66
NZ_CP017263.1\|WP_096836648.1\|18256_20317_-\|MobA/MobL-family-protein	gnl\|CDD\|367473	pfam03389, MobA_MobL, MobA/MobL family. This family includes of the MobA protein from the E. coli plasmid RSF1010, and the MobL protein from the Thiobacillus ferrooxidans plasmid PTF1. These sequences are mobilisation proteins, which are essential for specific plasmid transfer.	1.05025e-104
NZ_CP017263.1\|WP_016377552.1\|31894_33310_+\|IS5-family-transposase	gnl\|CDD\|290319	pfam13586, DDE_Tnp_1_2, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	5.11081e-12
NZ_CP017263.1\|WP_096836645.1\|14153_14639_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	9.12819e-21
NZ_CP017263.1\|WP_016372361.1\|16617_17175_-\|YdhK-family-protein	gnl\|CDD\|369427	pfam07563, DUF1541, Protein of unknown function (DUF1541). This family consists of several hypothetical bacterial and occurs as a tandem repeat.	3.35091e-19
NZ_CP017263.1\|WP_096836656.1\|29194_30874_+\|D-lactate-dehydrogenase	gnl\|CDD\|236872	PRK11183, PRK11183, D-lactate dehydrogenase; Provisional.	0
NZ_CP017263.1\|WP_123018129.1\|28195_28990_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.52192e-134
NZ_CP017263.1\|WP_096836651.1\|21086_21767_-\|zeta-toxin-family-protein	gnl\|CDD\|226648	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown].	1.43463e-39
NZ_CP017263.1\|WP_016383003.1\|17356_17608_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	7.1358e-16
NZ_CP017263.1\|WP_010014831.1\|21995_22277_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	6.2967e-11

>NZ_CP017263.1|WP_096836653.1|23163_23847_+|IS6-family-transposase
MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGLSVVDELEALLAA
>NZ_CP017263.1|WP_010014831.1|21995_22277_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MAVKEKKRVQVQIDKELADNTEAVLSQLGLNPTTAINMFYKRIVADAALPFKPALSEAERANLSLLKATKETPVTEFKDAKEVADWLNDPDED
>NZ_CP017263.1|WP_010620892.1|21763_21949_-|hypothetical-protein
MKDTITINDFFEIAKETDLKDLLDKSLHEPDPEKRKVYDALYTYFLDKRQDEVIKRKDFVR
>NZ_CP017263.1|WP_096836651.1|21086_21767_-|zeta-toxin-family-protein
MIDKPQYIIVAGINGAGKSTLYDTFPILFDKTKRINADELLRQMGGDWHKDSDNLKAMKEEIKQLHYALDHQQSIHVETTLAGRGKAQLNLIDKAHKNGFEVTLLYVALRDENLAIQRVNERVQKGGHGVPVTTIKKRYQQSKHNLPLVAFKSDKVMIYDNSEKFTSVYAREKGQVFKNDLRHFPWINQNITYPEKVQKQLQNFADQNPEVKPKNDPENKNDRPSY
>NZ_CP017263.1|WP_070792629.1|20818_21097_+|hypothetical-protein
MPNQYEKLVEQQARLKQKIEREDFKLRQSKYYESRQDRKARSRRLIQKGALLEKYFQADNLSIEQTEELLKTFADYVNAHKPNKLKNDQPNN
>NZ_CP017263.1|WP_183406791.1|20568_20796_+|hypothetical-protein
MIGGIVMSQSNLEKQEAKLKALNQKIKDEKIKIEQRLGKQIISQANLDYANLSNDQIKLLAKQSSEFLKVKSVDH
>NZ_CP017263.1|WP_096836648.1|18256_20317_-|MobA/MobL-family-protein
MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKEGRHYFYARSIMPESFILTPKNSPEWASDREQLWNEVEKKDRKSNSRYAKEFNVALPVELSESEQKELLTKYVQENFVDEGMVADVAIHRDHPDNPHAHVMLTNRPFNPDGTWGQKTKTEYILDSHGNKTKTPAGNVRNRKIWLVDWDKKEKINQWRHNWAVSVNQVLEQKNIPDRISEKSFVDQGIDDTPTQHVGINSKRHERKAFNQQVSTQRSAQAKYHNLDEKIRNHEHFDALTDELSFSEKHTISHLSQQLKTYVDLEHLDDKQRMLFNWKNSLLIKHAVGEDVTKQLLTIDQQTTSLAQANQLLNKVVERATKKLYPELDFEQTTAAERRELIKETNSEQTIFKGSELAERLADIRNDLLTQQLLTFTKRPYTSWQLVNQQAQTIEKQLTTLLAKHGHQLDDLKHTDRGMLAAYQPNELEFISKAVKNLRVMREVKAVVQTQYNSILTTAFPDSDLDKLETIDKEQIYTAVVYYDPELKPLSANDLSQLQQQPPVVFTSQQHQVGLNYLLGKIELKDIQNHRLQWVLKHDGTRQLFIGECGQDPKLDNKQIETVQARLKQQTTRFDQYKQDQIKDYQAINYYPTSPKNYLTNILDEALITILYAKNTDYLRKQQLRGLKETEWEMTKKQRQHQTRNRHEDGGMHL
>NZ_CP017263.1|WP_016383003.1|17356_17608_-|PspC-domain-containing-protein
MTKKKLTKSSDKIVSGVFGGIAEYFGWDKAIVRIIGAFLIIFPGNIIGGAILYAVTALVMTDPTQGDHSDDGDSVIKGEFREK
>NZ_CP017263.1|WP_016372361.1|16617_17175_-|YdhK-family-protein
MKKLVLYVCAVVAMLFLVAGCSSNSTQKEGSSTHSHSSEKTEMHEHTGSKKVHGLKKAEQPKYKAGTKVKLTADHMKGMKDANATIVNAYDSKLYAVDYKSTSDKKMVKDHKWVTINEIEGNRKEYKKGDKVTLKADHMAGMKNSSATIVEIQKGPAYMVNYQPTNGGKQVTNHKWVAEDEIEKR
>NZ_CP017263.1|WP_096836645.1|14153_14639_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MNKIELKKCKLDTWNENKKLEATRALNNAHTLDKRHFRAGSIFWADLGENVGYEINKNRPVLILSGEHFNRGTATVAPLTGSGRLDCPEKITKTQFIVHKNDIQQLSLDYADKIRDASLVKVEQVRTISAARIGGKIGYISTDQFEKIKLRVRTLFNLKIN
>NZ_CP017263.1|WP_020751805.1|25496_26264_+|ParA-family-protein
MPCLTIAIANQKGGVAKTTTVSELGELLSQQYHKKVLMIDIDPQASLTSIKGDMNDIIINNRKTMSNVMLRQSSIDEIVIPIKTNLYLAPATLVLSDVELNIINATLRELILKAALNSMLGSYDFVLIDCPPSRGLLTVNALSASDYVLIPIQAEYQALLGLQLLKNTVANVQSQINKELKVWGYVVTMTTRTNQSSDTLNEIKKDHYPILSTIPRSTKVSDAGVANMSTHEFDTSNPAGLAYLKLSEKLIGLEM
>NZ_CP017263.1|WP_016370074.1|26274_26658_+|hypothetical-protein
MANRKRVSISEKNIPNPATYDSLFKNEGSTQRIENADKKEERESSKDVQKKLHRFEDIKAYYLNFDRKKQISTYMPRALQIKLKSKAAAENMTLSQFLLNLILSQGLTDQEIKEAYQYEIDHPEINK
>NZ_CP017263.1|WP_020751804.1|26732_27095_-|hypothetical-protein
MDEATQLRLGIKSMLSQYNHYFTRAPHTRYWLVVVDNHFEDCYSFFIYMQRFKAKLTKSYEIACFKRDKGQYEHFLSSLKQHSNLSIEYRDTNHLILPDTEVQQDLIHGHSDLKAFPKIH
>NZ_CP017263.1|WP_002816607.1|27401_28085_+|IS6-family-transposase
MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
>NZ_CP017263.1|WP_123018129.1|28195_28990_+|IS3-family-transposase
MPKPSKRRAEDAGLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRCSPRRISRLMKQLDIHSVTVNKWKAASSSKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMATDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
>NZ_CP017263.1|WP_096836656.1|29194_30874_+|D-lactate-dehydrogenase
MDLVEELVNVVGKKNVITNKAKSLRFRKGYRSGKGDAVAVVFPTTLMAMWRVLNVLHDSNIIIIMQAANTSLTEGSVPAPGYDRSAVVVNGMKIKDLQLINNGEQVLAFPGTTLFHLENELRPLKREPHSVIGSSNLGASVIGGINNNSGGALIRRGPAYTELSLYVWIDEHDKMHLVNHLGIDLGKTPEEIITNLQNRNFDLNQVPATEHHASMFHHEQVVRDVESDKPIRYNANPKELYEVSGSSGHVAALAVRLDTFPMDKKTQMFYIGTNNPDELEDIRRHIMTTFKELPVSGEYMHKNAYKLAKKYGKDSLIVIEKIGTGHLPQMFALKAWGERFLKHIPFFKPYFPDRLLQTLSNLFPNQMPKRLDDYYEKYDHYLQLKMAGNGIEEAREYLKSYFDKASGDYFEADANETSKAATHRYVTAGVAIRYQELKQDSIDILPLDIALASNDYKWFEHLPKEIEDKIEHKIYYGHLLDHVMHQDYILKPGVDAHELKKEMLKILDERHAVYPAEHNVGHLYLAAPALIKHYKKNDPTNSFNPGVGKQTMSKYWGEY
>NZ_CP017263.1|WP_096836659.1|31015_31771_+|hypothetical-protein
MCAPNLLQFVPNDYIANNYLKTNFYLKDVLCYRKVEEKITGTMPSNLKFDDSEGKAKNWSLLRHCCFISCFTMLSTNDFKDGILDLGFAEKLKKGNVDNDGNRVERPFITISSENTQKLLIDLSNQVNDYLKDNNLKGSGLFSRAVKYLDEDDYKKEECYKENNITNINGVFINNDTKMISRSSRNDSLLKNILQFLYLFKPIYFKDQHEYRLGLTLDDPIDVNELFIPIHDLRKYVKVHPFQDINNLVAV
>NZ_CP017263.1|WP_016377552.1|31894_33310_+|IS5-family-transposase
MAYRHSPLQLSFESFGAGLSTPLSPDNEWVQLAEVMPWKALDDAYQLEFTKNLGRAAKPFRMLYGAGLIQQRMGLTDRGVVAAIRDTPALQYFIGLSEYKAVAPFSYSSLAHFRKRIADISELITNIINDTVRAKIEALVPFKVDTVITDATAVPVKIKYPQDTVLLNQARLNLEAMAIDMAHQLGVPNPRMYKREAKHCWTAFSRHPKQQRGGFHKQVKAQLQYVRRDLRYINEFLDLGATLPEKQAIRLGVIRILFDQQWYMYTHKTHRVENRIVSLQQPYIRPIQRGKANAKVEFGAKIDCSLSEGVIDIECFDFNAFSEGKDFKETLDHYFDLHGHYPDEVLADTLYRNRENLKLCKDLGIRICGPKLGRHPKHVNTEQRRKDTDAENRRGAIERRFAFMKGSLGLDLVNTRTAESLAVKIDEAIVLSNVLALMRVFAIPIFVLAESEGVTYQIRYKFTTKVEDMVA
>NZ_CP017263.1|WP_002816607.1|34060_34744_+|IS6-family-transposase
MNHFKGRHFQKDIILVAVGYYFRFSLSYRDIVELLRDRGITVHHTTVMRWVHHYGPIFKALWRRHQTAHAKSWRIDETYIRVKGRWAYLYRAIDSNGLTMDFELRKHRDYTASYHFLKRLLTTNGRPDRLVTDQYRATLKAVKHLIKQDYLSKSAHQCSKYRNNLIEQDHRFIKRHRVRSASFQSIRTASATLSGVEIVHAIRKRTRRELSLIGFSVVDELEALLAA
>NZ_CP017263.1|WP_003592282.1|34935_35886_-|LacI-family-DNA-binding-transcriptional-regulator
MITLADVAKESHVSTMTVSRVLHHPEQVSDEVRQAVQQAISKLGYKPSRVGQALSQQRQFAIQFLILEDIQQVDPYYAKLLLYIADYLREQGYTLEISHDLTDHSSQVDGTFVSGARQQDLPLLTKSSDPIVSYGQLDQTIKYVDIDNFQGTYQMTHYLAKCGYQNLLYFGLDLNEAFAISREEGYLQAMTELNKMPTIFRIDNTEQAAANLIEQLIITDNSVIVAATDRIAIGALQQLLHLGIKIPADVGVTGFDGVFINQISLQHLTTVQQPLKKIAQSMVELLLGMIEKRPGKSTLIPPQLSIAQTTRALEEK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP017263_1	1.1\|24509\|40\|NZ_CP017263\|CRISPRCasFinder	24509-24548	40	NC_021722	Lactobacillus paracasei strain LOCK919 plasmid pLOCK919, complete sequence	527-566	1.0
NZ_CP017263_1	1.1\|24509\|40\|NZ_CP017263\|CRISPRCasFinder	24509-24548	40	NZ_CP035564	Lactobacillus paracasei strain SRCM103299 plasmid unnamed1	65110-65149	1.0
NZ_CP017263_1	1.1\|24509\|40\|NZ_CP017263\|CRISPRCasFinder	24509-24548	40	NZ_CP029537	Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence	34561-34600	1.0
NZ_CP017263_1	1.1\|24509\|40\|NZ_CP017263\|CRISPRCasFinder	24509-24548	40	NZ_CP017263	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence	24509-24548	1.0
NZ_CP017263_1	1.2\|24575\|28\|NZ_CP017263\|CRISPRCasFinder	24575-24602	28	NZ_CP029537	Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence	34627-34654	1.0
NZ_CP017263_1	1.2\|24575\|28\|NZ_CP017263\|CRISPRCasFinder	24575-24602	28	NZ_CP017263	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence	24575-24602	1.0
NZ_CP017263_1	1.2\|24575\|28\|NZ_CP017263\|CRISPRCasFinder	24575-24602	28	NC_021722	Lactobacillus paracasei strain LOCK919 plasmid pLOCK919, complete sequence	473-500	1.0
NZ_CP017263_1	1.2\|24575\|28\|NZ_CP017263\|CRISPRCasFinder	24575-24602	28	NZ_CP035564	Lactobacillus paracasei strain SRCM103299 plasmid unnamed1	65056-65083	1.0

1. spacer 1.1|24509|40|NZ_CP017263|CRISPRCasFinder matches to NC_021722 (Lactobacillus paracasei strain LOCK919 plasmid pLOCK919, complete sequence) position: , mismatch: 0, identity: 1.0

ctattttcaaggggtccggcttcacttgagttcttatgtc	CRISPR spacer
ctattttcaaggggtccggcttcacttgagttcttatgtc	Protospacer
****************************************

2. spacer 1.1|24509|40|NZ_CP017263|CRISPRCasFinder matches to NZ_CP035564 (Lactobacillus paracasei strain SRCM103299 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ctattttcaaggggtccggcttcacttgagttcttatgtc	CRISPR spacer
ctattttcaaggggtccggcttcacttgagttcttatgtc	Protospacer
****************************************

3. spacer 1.1|24509|40|NZ_CP017263|CRISPRCasFinder matches to NZ_CP029537 (Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctattttcaaggggtccggcttcacttgagttcttatgtc	CRISPR spacer
ctattttcaaggggtccggcttcacttgagttcttatgtc	Protospacer
****************************************

4. spacer 1.1|24509|40|NZ_CP017263|CRISPRCasFinder matches to NZ_CP017263 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence) position: , mismatch: 0, identity: 1.0

ctattttcaaggggtccggcttcacttgagttcttatgtc	CRISPR spacer
ctattttcaaggggtccggcttcacttgagttcttatgtc	Protospacer
****************************************

5. spacer 1.2|24575|28|NZ_CP017263|CRISPRCasFinder matches to NZ_CP029537 (Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgttttcggtagtttgaacggtctctt	CRISPR spacer
ctgttttcggtagtttgaacggtctctt	Protospacer
****************************

6. spacer 1.2|24575|28|NZ_CP017263|CRISPRCasFinder matches to NZ_CP017263 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.22, complete sequence) position: , mismatch: 0, identity: 1.0

ctgttttcggtagtttgaacggtctctt	CRISPR spacer
ctgttttcggtagtttgaacggtctctt	Protospacer
****************************

7. spacer 1.2|24575|28|NZ_CP017263|CRISPRCasFinder matches to NC_021722 (Lactobacillus paracasei strain LOCK919 plasmid pLOCK919, complete sequence) position: , mismatch: 0, identity: 1.0

ctgttttcggtagtttgaacggtctctt	CRISPR spacer
ctgttttcggtagtttgaacggtctctt	Protospacer
****************************

8. spacer 1.2|24575|28|NZ_CP017263|CRISPRCasFinder matches to NZ_CP035564 (Lactobacillus paracasei strain SRCM103299 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ctgttttcggtagtttgaacggtctctt	CRISPR spacer
ctgttttcggtagtttgaacggtctctt	Protospacer
****************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_CP017261

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2729 : 45605

Burkholderia_virus(20.0%)

protease,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080595781.1\|2729_3638_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-12	30.2
WP_003573417.1\|4143_5124_+	ribose ABC transporter permease	NA	NA	NA	NA
WP_003601171.1\|5180_6140_+	D-ribose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003601173.1\|6279_7209_+	ribokinase	NA	NA	NA	NA
WP_096835879.1\|7626_9618_-	cell division protein FtsI	NA	NA	NA	NA
WP_003601178.1\|9792_11175_+	MFS transporter	NA	NA	NA	NA
WP_003601179.1\|11155_11590_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003601180.1\|11586_12150_+	hypothetical protein	NA	NA	NA	NA
WP_003601181.1\|12162_12378_+	hypothetical protein	NA	NA	NA	NA
WP_003601182.1\|13191_13881_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_003601183.1\|13944_14631_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_016385778.1\|15142_16669_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	1.3e-52	31.3
WP_016385779.1\|16938_19035_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003601187.1\|19035_19347_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_016385780.1\|19474_20761_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_016385781.1\|20777_21200_+	hypothetical protein	NA	NA	NA	NA
WP_003563251.1\|21221_22082_+	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_016385782.1\|22195_22837_+	AAA family ATPase	NA	NA	NA	NA
WP_003601195.1\|23123_23954_+	TrmB family transcriptional regulator	NA	NA	NA	NA
WP_003563257.1\|23946_24816_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003601196.1\|24855_25851_+	ornithine cyclodeaminase family protein	NA	NA	NA	NA
WP_003601202.1\|26647_27337_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-29	38.4
WP_003601205.1\|27497_28868_-	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	4.8e-11	27.0
WP_032765802.1\|29231_30050_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003563382.1\|30366_30636_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_003601215.1\|30875_31883_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003563385.1\|31934_32426_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003563386.1\|32468_33278_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003568992.1\|33270_34122_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_003597397.1\|34151_36395_+	maltodextrin glucosidase	NA	NA	NA	NA
WP_003573589.1\|36484_36901_+	PTS N-acetylglucosamine transporter subunit IIBC	NA	NA	NA	NA
WP_096836520.1\|36893_38579_+	alpha-glucosidase	NA	NA	NA	NA
WP_003585301.1\|38812_39010_+	hypothetical protein	NA	NA	NA	NA
WP_003585300.1\|38984_39338_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_011674296.1\|39438_40941_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_016386039.1\|41071_42883_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-45	28.8
WP_071798369.1\|45103_45226_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_071798372.1\|45467_45605_+\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_2

114968 : 220543

105

Lactobacillus_phage(55.36%)

protease,transposase,portal,integrase,holin,terminase,capsid,tail

attL 122080:122102|attR 176031:176053

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096835888.1\|114968_116387_+\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_003601283.1\|117661_118165_-	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_016386092.1\|118343_119237_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	9.7e-05	31.5
WP_003601286.1\|119391_120258_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_003601287.1\|120274_121108_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003601288.1\|121204_122101_+	shikimate dehydrogenase	NA	NA	NA	NA
122080:122102	attL	NA	NA	NA	NA
WP_096835890.1\|122251_123469_+	MFS transporter	NA	NA	NA	NA
WP_003601290.1\|123487_124387_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_003601291.1\|124831_125647_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_003601293.1\|125680_126610_+	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	8.6e-105	63.4
WP_003601295.1\|126799_127345_-	hypothetical protein	NA	NA	NA	NA
WP_096835892.1\|127666_128836_-\|integrase	site-specific integrase	Q6J1W6	Lactobacillus_phage	2.0e-220	98.5
WP_096835894.1\|128954_129218_-	hypothetical protein	B4XYT0	Lactobacillus_phage	6.5e-10	43.5
WP_096835897.1\|129331_129934_+	hypothetical protein	NA	NA	NA	NA
WP_096835902.1\|130289_130967_-	transcriptional regulator	A0A2D1GPN7	Lactobacillus_phage	4.2e-85	95.6
WP_096835904.1\|131023_131671_-	helix-turn-helix domain-containing protein	B4XYR6	Lactobacillus_phage	1.4e-37	42.2
WP_096835905.1\|131819_132086_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096835907.1\|132082_132844_+	phage antirepressor KilAC domain-containing protein	Q6J1W3	Lactobacillus_phage	3.2e-126	90.9
WP_096835909.1\|132978_133224_-	hypothetical protein	NA	NA	NA	NA
WP_003661433.1\|133298_133544_+	hypothetical protein	NA	NA	NA	NA
WP_032780976.1\|133558_133828_-	DUF3892 domain-containing protein	A0A059NT53	Lactococcus_phage	5.7e-09	58.6
WP_003661430.1\|134066_134255_+	hypothetical protein	NA	NA	NA	NA
WP_003661429.1\|134251_134932_-	hypothetical protein	NA	NA	NA	NA
WP_096835911.1\|134997_135357_+	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	1.4e-63	98.3
WP_128528277.1\|135458_135677_+	hypothetical protein	NA	NA	NA	NA
WP_096835913.1\|135627_136332_-	DUF4145 domain-containing protein	A0A1L2JZ52	Aeribacillus_phage	1.3e-12	30.2
WP_016378891.1\|136573_136888_+	hypothetical protein	NA	NA	NA	NA
WP_096835915.1\|136880_137708_+	helix-turn-helix domain-containing protein	U5U793	Lactobacillus_phage	1.6e-115	75.8
WP_096835917.1\|137704_138967_+	DNA helicase	U5U3Y9	Lactobacillus_phage	1.1e-232	97.1
WP_096835919.1\|138968_139313_+	hypothetical protein	U5U420	Lactobacillus_phage	3.7e-61	99.1
WP_032957370.1\|139354_139756_+	RusA family crossover junction endodeoxyribonuclease	A8YQM5	Lactobacillus_phage	4.4e-50	71.5
WP_096835921.1\|139768_140233_+	endonuclease	A0A0P0IXF6	Lactobacillus_phage	1.3e-13	97.4
WP_096835923.1\|140244_141072_+	DNA (cytosine-5-)-methyltransferase	A8YQM6	Lactobacillus_phage	1.1e-103	73.9
WP_096835924.1\|141190_141727_+	DUF1642 domain-containing protein	C1KFT3	Lactobacillus_virus	2.0e-50	59.2
WP_096836523.1\|141716_141929_+	hypothetical protein	NA	NA	NA	NA
WP_096835925.1\|141918_142209_+	hypothetical protein	NA	NA	NA	NA
WP_096835927.1\|142198_142624_+	hypothetical protein	B4XYT7	Lactobacillus_phage	1.5e-40	63.7
WP_096835929.1\|142620_142908_+	hypothetical protein	Q6J1U4	Lactobacillus_phage	9.0e-37	86.0
WP_096835931.1\|142904_143318_+	hypothetical protein	C1KFT7	Lactobacillus_virus	6.4e-36	56.6
WP_096835935.1\|143702_143921_+	helix-turn-helix transcriptional regulator	A0A0P0IXA5	Lactobacillus_phage	1.1e-31	95.8
WP_096835937.1\|143994_144423_+	DUF1492 domain-containing protein	A0A0P0IJK8	Lactobacillus_phage	3.3e-75	97.2
WP_096835939.1\|145412_146561_+	hypothetical protein	B4XYU0	Lactobacillus_phage	1.1e-221	98.4
WP_096835941.1\|146573_147104_+	HNH endonuclease	Q8LTA0	Lactobacillus_phage	2.3e-62	65.5
WP_096835943.1\|147107_147428_+	ribonucleoside-diphosphate reductase	U5U741	Lactobacillus_phage	1.1e-51	93.3
WP_096835946.1\|148000_148336_+	HNH endonuclease	A0A2H4J213	uncultured_Caudovirales_phage	4.9e-26	53.8
WP_003572621.1\|148569_148788_+	hypothetical protein	D2XR14	Bacillus_phage	1.2e-06	41.1
WP_096835948.1\|148784_150476_+\|terminase	terminase large subunit	A0A2P0ZLE5	Lactobacillus_phage	1.9e-171	52.9
WP_096835950.1\|150490_151798_+\|portal	phage portal protein	A8AT96	Listeria_phage	1.0e-82	43.5
WP_096835953.1\|151775_152504_+\|protease	Clp protease ClpP	M1Q115	Streptococcus_phage	4.2e-38	39.5
WP_096835954.1\|152525_153695_+\|capsid	phage major capsid protein	A0A2P0ZLD6	Lactobacillus_phage	1.7e-102	51.7
WP_114650373.1\|153691_153838_+	hypothetical protein	NA	NA	NA	NA
WP_096835955.1\|153830_154121_+	hypothetical protein	A0A2P0ZLD5	Lactobacillus_phage	1.8e-16	45.8
WP_096835956.1\|154113_154494_+	hypothetical protein	M9QX19	Staphylococcus_phage	1.2e-09	32.7
WP_096835958.1\|154490_154904_+	hypothetical protein	A0A2P0ZLD7	Lactobacillus_phage	1.7e-33	54.5
WP_003603965.1\|154900_155278_+	hypothetical protein	A0A059T681	Listeria_phage	6.5e-19	43.2
WP_096835961.1\|155292_155883_+\|tail	phage tail protein	A0A2P0ZLF5	Lactobacillus_phage	1.2e-32	39.6
WP_080769642.1\|155900_156137_+	Ig domain-containing protein	B8QTT6	Erwinia_phage	2.4e-11	58.7
WP_096835962.1\|156211_156529_+	hypothetical protein	NA	NA	NA	NA
WP_096835964.1\|156708_160677_+\|tail	phage tail tape measure protein	E9LUJ2	Lactobacillus_phage	3.1e-10	35.9
WP_096835966.1\|160673_162572_+\|tail	phage tail family protein	Q3L0S3	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	4.0e-290	78.2
WP_096835968.1\|162572_165491_+\|tail	phage tail protein	Q3L0S2	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	0.0e+00	65.1
WP_096835970.1\|165492_165783_+	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.5e-23	55.2
WP_003601642.1\|165775_165907_+	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	9.4e-18	93.0
WP_016369921.1\|165937_166336_+	hypothetical protein	U5U712	Lactobacillus_phage	4.4e-66	99.2
WP_016376687.1\|166304_166514_+	hypothetical protein	A8YQK5	Lactobacillus_phage	3.3e-12	92.3
WP_096835971.1\|166506_166953_+\|holin	phage holin	A8YQK6	Lactobacillus_phage	8.4e-66	95.9
WP_096835973.1\|166963_168262_+	LysM peptidoglycan-binding domain-containing protein	B4XYQ9	Lactobacillus_phage	1.2e-221	90.0
WP_096835975.1\|168276_168480_+	hypothetical protein	NA	NA	NA	NA
WP_003601297.1\|168759_169548_+	hypothetical protein	NA	NA	NA	NA
WP_003601307.1\|169630_170770_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_003563521.1\|170871_171684_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003573812.1\|171715_172429_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003601310.1\|173255_174167_+	hypothetical protein	NA	NA	NA	NA
WP_003601311.1\|174439_175828_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_003601313.1\|176874_177540_+	WxL domain-containing protein	NA	NA	NA	NA
176031:176053	attR	NA	NA	NA	NA
WP_016386016.1\|177607_178627_+	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA
WP_003601318.1\|178607_178985_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_096835977.1\|181649_182570_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.6e-21	34.5
WP_003583596.1\|182872_183574_+	WxL domain-containing protein	NA	NA	NA	NA
WP_003563546.1\|183724_184084_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003563548.1\|184067_184769_+	WxL domain-containing protein	NA	NA	NA	NA
WP_096835978.1\|184933_186955_+	WxL domain-containing protein	NA	NA	NA	NA
WP_003601323.1\|187030_188005_-	EamA family transporter	NA	NA	NA	NA
WP_016386090.1\|188172_189900_-	hypothetical protein	NA	NA	NA	NA
WP_003601325.1\|189886_190681_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.0e-27	31.3
WP_003563576.1\|190932_191481_-	ECF transporter S component	NA	NA	NA	NA
WP_003601326.1\|191528_192353_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003601327.1\|192524_193397_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_003601328.1\|193374_195660_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_003601329.1\|196536_198255_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.2e-31	23.9
WP_003601330.1\|198259_200041_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.5e-46	26.7
WP_003601331.1\|200202_201447_+	OFA family MFS transporter	NA	NA	NA	NA
WP_003587307.1\|201733_202450_+	trehalose operon repressor	NA	NA	NA	NA
WP_080595781.1\|203024_203933_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-12	30.2
WP_003597552.1\|203869_204568_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.3e-22	31.7
WP_016385746.1\|206016_208020_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_003563595.1\|208360_209665_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_003593375.1\|209885_211361_+	amino acid permease	NA	NA	NA	NA
WP_003601337.1\|212708_214049_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_003563620.1\|214221_214422_+	cold-shock protein	Q9AZD3	Lactococcus_phage	3.1e-20	67.7
WP_003601343.1\|215176_215617_-	OsmC family protein	NA	NA	NA	NA
WP_096835982.1\|215816_217298_-	ABC-F type ribosomal protection protein	Q6DMX7	Streptococcus_phage	3.1e-32	26.9
WP_003601347.1\|217657_218272_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_096835984.1\|218491_219337_-	aldo/keto reductase	A0A1V0SKP9	Klosneuvirus	6.2e-09	23.5
WP_003600190.1\|219526_220543_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	6.4e-37	34.6

DBSCAN-SWA_3

409422 : 515002

105

Lactobacillus_phage(81.13%)

protease,transposase,portal,integrase,holin,terminase,tRNA,capsid,tail,head

attL 420704:420722|attR 498762:498780

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836011.1\|409422_410925_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_016385900.1\|411025_411550_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_096836013.1\|411698_412967_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	7.7e-48	31.1
WP_003564071.1\|413336_413885_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003601618.1\|414262_415981_+	APC family permease	NA	NA	NA	NA
WP_003569394.1\|416267_417476_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_096836015.1\|417478_418507_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003601621.1\|418519_419533_+	flippase-like domain-containing protein	NA	NA	NA	NA
WP_003564083.1\|419568_419922_+	hypothetical protein	NA	NA	NA	NA
WP_016378905.1\|420007_421183_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
420704:420722	attL	NA	NA	NA	NA
WP_003601625.1\|421428_421707_+	YkuJ family protein	NA	NA	NA	NA
WP_003601628.1\|421937_424031_+	LTA synthase family protein	W6LM83	Streptococcus_phage	8.0e-151	46.8
WP_003564091.1\|424223_424664_+	transcriptional repressor	NA	NA	NA	NA
WP_003601647.1\|430717_431365_-	hypothetical protein	NA	NA	NA	NA
WP_003601648.1\|431545_432730_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	7.3e-141	65.7
WP_016386015.1\|432843_434337_+	MFS transporter	NA	NA	NA	NA
WP_003569429.1\|434434_434905_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003601651.1\|436620_437346_+	DUF4811 domain-containing protein	NA	NA	NA	NA
WP_096836017.1\|437446_438130_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_016377889.1\|438584_440996_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	68.4
WP_003601656.1\|441261_442905_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_003601658.1\|442909_443620_+	pseudouridine synthase	NA	NA	NA	NA
WP_003564132.1\|443762_443978_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_003601660.1\|444094_444916_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_003564134.1\|444912_445416_-	NUDIX hydrolase	NA	NA	NA	NA
WP_016387342.1\|445739_446879_-\|integrase	site-specific integrase	A0A0P0IXL3	Lactobacillus_phage	2.3e-216	98.9
WP_157780093.1\|447041_447200_+	hypothetical protein	NA	NA	NA	NA
WP_096836019.1\|447196_448054_-	hypothetical protein	NA	NA	NA	NA
WP_071798118.1\|448148_448913_-	ion transporter	A0A1B0Y2S3	Lactobacillus_phage	7.0e-44	55.5
WP_071798119.1\|448926_449337_-	hypothetical protein	NA	NA	NA	NA
WP_003578190.1\|449940_450138_+	hypothetical protein	A0A0P0IK60	Lactobacillus_phage	5.2e-28	100.0
WP_096836021.1\|450134_450932_+	ORF6N domain-containing protein	A0A0P0IDD0	Lactobacillus_phage	2.8e-56	59.8
WP_003593164.1\|450939_451152_+	hypothetical protein	A0A0N7IRA6	Lactobacillus_phage	1.7e-29	98.6
WP_003657835.1\|451260_451485_+	DUF771 domain-containing protein	A0A0P0IQT9	Lactobacillus_phage	2.6e-39	100.0
WP_012491233.1\|451573_451786_+	hypothetical protein	A0A0P0IXL9	Lactobacillus_phage	2.5e-36	100.0
WP_060611972.1\|451795_452671_+	YqaJ viral recombinase family protein	A0A0P0IJW5	Lactobacillus_phage	1.0e-168	98.6
WP_016364601.1\|452673_452868_+	hypothetical protein	A0A0P0IZQ2	Lactobacillus_phage	5.5e-30	98.4
WP_025376214.1\|452867_453755_+	recombinase RecT	A0A0P0HRX2	Lactobacillus_phage	1.6e-161	99.0
WP_071798131.1\|453763_454009_+	helix-turn-helix transcriptional regulator	A0A0P0IV68	Lactobacillus_phage	5.5e-35	95.1
WP_071798133.1\|454013_454847_+	DnaD domain protein	A0A0N7IRA7	Lactobacillus_phage	2.2e-120	90.4
WP_096836023.1\|454884_455706_+	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	1.8e-154	99.6
WP_096836025.1\|455702_456002_+	hypothetical protein	A0A0P0IK66	Lactobacillus_phage	2.1e-41	85.9
WP_003593183.1\|455964_456249_+	hypothetical protein	A0A0P0IDD7	Lactobacillus_phage	4.9e-43	95.7
WP_060611979.1\|456217_456565_+	hypothetical protein	A0A0P0IQU7	Lactobacillus_phage	9.7e-62	99.1
WP_012491243.1\|456557_457136_+	HNH endonuclease	A0A0P0I7T6	Lactobacillus_phage	1.1e-105	100.0
WP_025376211.1\|457152_457572_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0IXM5	Lactobacillus_phage	3.5e-74	98.6
WP_096836027.1\|457576_457867_+	hypothetical protein	A0A0P0IJX1	Lactobacillus_phage	1.6e-38	96.6
WP_096836029.1\|457863_458187_+	hypothetical protein	A0A0N7IRA8	Lactobacillus_phage	1.1e-54	98.1
WP_096836031.1\|458265_458715_+	sigma-70 family RNA polymerase sigma factor	A0A0P0IZR0	Lactobacillus_phage	8.4e-74	91.9
WP_096836033.1\|458939_459320_+	HNH endonuclease	A0A0P0HRY0	Lactobacillus_phage	2.6e-68	95.2
WP_003582259.1\|459389_459764_+	hypothetical protein	A0A1B0YE76	Lactobacillus_phage	3.6e-62	100.0
WP_096836035.1\|459766_461497_+\|terminase	terminase large subunit	A0A1B0Y6B8	Lactobacillus_phage	0.0e+00	99.1
WP_020751509.1\|461515_462751_+\|portal	phage portal protein	A0A0P0IZM3	Lactobacillus_phage	8.4e-233	99.3
WP_096836037.1\|462728_463436_+\|protease	Clp protease ClpP	A0A0P0HRU7	Lactobacillus_phage	1.6e-127	99.6
WP_071798154.1\|463440_464670_+\|capsid	phage major capsid protein	A0A1B0YA73	Lactobacillus_phage	2.8e-228	99.5
WP_096836040.1\|464743_464992_+	hypothetical protein	A0A0P0I3K0	Lactobacillus_phage	9.1e-38	98.8
WP_003582271.1\|465005_465332_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B0Y2R7	Lactobacillus_phage	7.0e-54	100.0
WP_012491255.1\|465270_465609_+\|head	phage head closure protein	A0A0N7IRA3	Lactobacillus_phage	2.2e-58	100.0
WP_096836041.1\|465592_465922_+	hypothetical protein	A0A1B0Y3M9	Lactobacillus_phage	6.8e-57	99.1
WP_096836043.1\|465911_466295_+	hypothetical protein	A0A0P0IQS9	Lactobacillus_phage	5.0e-67	97.6
WP_096836045.1\|466306_466954_+\|tail	phage tail protein	A0A0P0I7R6	Lactobacillus_phage	1.4e-117	98.1
WP_003595114.1\|467030_467396_+	hypothetical protein	A0A1B0Y865	Lactobacillus_phage	4.6e-62	100.0
WP_012491334.1\|467476_467638_+	hypothetical protein	A0A1B0Y4R4	Lactobacillus_phage	5.7e-25	100.0
WP_096836047.1\|467657_470828_+\|tail	phage tail tape measure protein	A0A1B0YA78	Lactobacillus_phage	1.7e-248	86.4
WP_096836049.1\|470834_471530_+\|tail	phage tail protein	A0A1B0Y2S2	Lactobacillus_phage	1.2e-124	96.5
WP_096836051.1\|471526_475831_+\|tail	phage tail protein	A0A1B0Y2S0	Lactobacillus_phage	0.0e+00	71.9
WP_096836053.1\|475859_476285_+	DUF1617 family protein	A0A1B0Y2S1	Lactobacillus_phage	2.6e-72	99.3
WP_020751519.1\|476287_476557_+	hypothetical protein	A0A1B0Y3N0	Lactobacillus_phage	4.4e-38	97.7
WP_096836055.1\|476603_476897_+	hypothetical protein	A0A0P0IK41	Lactobacillus_phage	2.9e-43	89.7
WP_096836056.1\|476886_477318_+\|holin	phage holin	A0A0P0IDC6	Lactobacillus_phage	6.7e-44	95.9
WP_096836058.1\|477319_478372_+	peptidoglycan recognition protein	A0A1B0Y4R9	Lactobacillus_phage	1.8e-204	98.3
WP_016386020.1\|478895_480395_+	glycosyltransferase	NA	NA	NA	NA
WP_016386019.1\|480422_481982_+	glycosyltransferase	NA	NA	NA	NA
WP_003601666.1\|482069_482543_+	glutathione peroxidase	NA	NA	NA	NA
WP_003601668.1\|482887_484093_+	putative C-S lyase	NA	NA	NA	NA
WP_003601670.1\|484226_485555_-	metallophosphoesterase	NA	NA	NA	NA
WP_003564140.1\|485745_486012_+	ACT domain-containing protein	NA	NA	NA	NA
WP_003574245.1\|486060_487404_+	PFL family protein	NA	NA	NA	NA
WP_003601672.1\|487513_488569_+	competence protein	NA	NA	NA	NA
WP_003601677.1\|488758_489394_-	DsbA family protein	NA	NA	NA	NA
WP_003601679.1\|489463_490057_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_003564145.1\|490250_490922_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_003564146.1\|490923_491721_+	NAD kinase	NA	NA	NA	NA
WP_003601681.1\|491720_492623_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_016386017.1\|492731_493790_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_003583942.1\|493946_494582_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003564150.1\|494603_495422_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_016377049.1\|495540_496539_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.0e-55	39.5
WP_096836061.1\|496744_497785_-	lactonase family protein	NA	NA	NA	NA
WP_003564152.1\|498056_498434_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_003564153.1\|498545_498815_-	30S ribosomal protein S14	NA	NA	NA	NA
498762:498780	attR	NA	NA	NA	NA
WP_003564154.1\|498942_499932_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	8.2e-138	71.9
WP_003564155.1\|500159_501107_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_096836063.1\|501172_502015_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003601708.1\|502269_502779_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003564159.1\|502905_503316_+	DUF1149 family protein	NA	NA	NA	NA
WP_003601713.1\|503488_505810_+	DNA translocase FtsK	G1FGP1	Mycobacterium_phage	8.5e-85	50.0
WP_003601715.1\|505818_507081_+	insulinase family protein	NA	NA	NA	NA
WP_003601717.1\|507077_508370_+	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	3.7e-05	27.3
WP_003601719.1\|508369_509098_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003601721.1\|509184_510123_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003564171.1\|510119_510713_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_016386175.1\|511128_512370_+	competence/damage-inducible protein A	NA	NA	NA	NA
WP_016386176.1\|512426_513488_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	3.6e-123	66.3
WP_016386172.1\|513724_515002_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.9e-49	31.0

DBSCAN-SWA_4

536900 : 611229

Streptococcus_phage(27.27%)

tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003564220.1\|536900_537236_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_003564222.1\|537426_538386_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_003578277.1\|538387_539215_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_096836070.1\|539225_540281_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003564228.1\|540346_541294_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	3.6e-82	48.2
WP_003564230.1\|541875_543603_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	5.0e-183	55.1
WP_003601747.1\|543818_544487_+	response regulator transcription factor	NA	NA	NA	NA
WP_003601756.1\|546271_548638_+	ABC transporter permease	NA	NA	NA	NA
WP_003564240.1\|548900_549548_+	HD domain-containing protein	NA	NA	NA	NA
WP_003601758.1\|549753_551769_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_003564244.1\|552036_554928_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.9e-307	56.2
WP_003601760.1\|555278_555818_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_003564248.1\|555980_556868_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	31.4
WP_003564250.1\|556864_557893_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	2.3e-90	51.2
WP_016378121.1\|557897_558845_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	9.2e-54	40.7
WP_003564253.1\|559230_559686_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003601767.1\|559802_560393_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.1e-52	51.8
WP_003601769.1\|561194_562232_+	central glycolytic pathway regulator	NA	NA	NA	NA
WP_003564265.1\|562268_563291_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_003564267.1\|563481_564672_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_003601772.1\|564746_565502_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_003564271.1\|565550_566855_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.4e-163	67.1
WP_180370776.1\|567203_568484_+	MFS transporter	A0A1B0RXG2	Streptococcus_phage	4.7e-61	34.9
WP_003578319.1\|568489_568846_+	hypothetical protein	NA	NA	NA	NA
WP_003601777.1\|568934_570506_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
WP_003564279.1\|570691_570928_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_003569577.1\|571170_571905_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_016385787.1\|571906_574276_+	ribonuclease R	Q0GXV6	Lactococcus_phage	3.9e-93	38.6
WP_003564285.1\|574307_574781_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.2e-46	60.5
WP_096836074.1\|575178_576132_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003601783.1\|578008_579754_+	alpha-glycosidase	NA	NA	NA	NA
WP_080595781.1\|579850_580759_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-12	30.2
WP_003597552.1\|580695_581394_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.3e-22	31.7
WP_096836077.1\|581579_582500_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.6e-21	34.5
WP_003601789.1\|584736_585429_+	beta-phosphoglucomutase	NA	NA	NA	NA
WP_016386188.1\|585433_586564_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	5.5e-21	32.8
WP_096836079.1\|586591_588217_+	alpha-glucosidase	NA	NA	NA	NA
WP_003601796.1\|588256_589489_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_096836083.1\|590061_591480_+\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_003564309.1\|592494_593352_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003564311.1\|593489_593792_+	hypothetical protein	NA	NA	NA	NA
WP_003564314.1\|593781_593970_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003601799.1\|594374_595622_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_096836085.1\|595750_597064_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003569669.1\|597073_597895_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_003564323.1\|597910_598804_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_003593952.1\|598793_599855_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-21	34.5
WP_003569672.1\|600224_600806_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003569673.1\|601102_601609_-	hypothetical protein	NA	NA	NA	NA
WP_003569675.1\|601821_602715_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003601805.1\|602834_603521_+	uracil-DNA glycosylase	A0A0S1TKU8	Elephant_endotheliotropic_herpesvirus	2.1e-39	41.7
WP_003564336.1\|603642_604620_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_003601807.1\|604616_605078_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_003601809.1\|605527_606424_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.1e-23	30.1
WP_003561810.1\|607242_608172_+\|transposase	IS30-like element ISLpl1 family transposase	H7BW61	unidentified_phage	6.5e-20	29.9
WP_003564348.1\|608857_609400_-	exonuclease	A0A1S5SFA9	Streptococcus_phage	3.7e-23	41.0
WP_016385769.1\|609411_610170_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	4.0e-60	47.7
WP_096836087.1\|610308_611229_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.0e-21	34.5

DBSCAN-SWA_5

621073 : 665249

Staphylococcus_phage(16.67%)

transposase,portal,integrase,terminase,capsid,tail,head

attL 619481:619497|attR 668090:668106

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
619481:619497	attL	NA	NA	NA	NA
WP_011674296.1\|621073_622576_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_096836090.1\|622636_625444_-	cation-transporting P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	2.1e-74	29.0
WP_003584127.1\|625547_626192_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_016385771.1\|626229_627369_-	ABC transporter permease	NA	NA	NA	NA
WP_003574320.1\|627358_628093_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-27	35.8
WP_003598215.1\|628356_629214_+	TIGR00159 family protein	NA	NA	NA	NA
WP_003598218.1\|629210_630299_+	hypothetical protein	NA	NA	NA	NA
WP_004559590.1\|630320_631685_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_003569704.1\|632000_633812_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1GV45	Paramecium_bursaria_Chlorella_virus	4.4e-89	37.5
WP_004559592.1\|634019_635825_-	M3 family oligoendopeptidase	NA	NA	NA	NA
WP_004559593.1\|635899_636391_+	VanZ family protein	NA	NA	NA	NA
WP_003564397.1\|636461_637193_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004559594.1\|637317_638184_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_004559595.1\|638180_639023_+	type II secretion system F family protein	NA	NA	NA	NA
WP_019728331.1\|639052_640069_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.4e-36	33.4
WP_003564402.1\|640328_640652_+	type II secretion system protein	NA	NA	NA	NA
WP_003598228.1\|640648_641089_+	hypothetical protein	NA	NA	NA	NA
WP_003598230.1\|641133_641370_+	hypothetical protein	NA	NA	NA	NA
WP_003598231.1\|641329_641791_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_003598233.1\|641774_642107_+	hypothetical protein	NA	NA	NA	NA
WP_003598234.1\|642209_643220_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003598235.1\|643438_643897_+	hypothetical protein	NA	NA	NA	NA
WP_003601839.1\|644035_645424_+	amino acid permease	NA	NA	NA	NA
WP_003598236.1\|645623_646388_+	hypothetical protein	NA	NA	NA	NA
WP_003564420.1\|646384_647224_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_003601841.1\|647224_648181_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_096836092.1\|648177_649047_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_016386340.1\|649324_651616_+	alpha-galactosidase	NA	NA	NA	NA
WP_003569727.1\|651886_652195_-	hypothetical protein	NA	NA	NA	NA
WP_096836095.1\|652466_653615_-\|integrase	site-specific integrase	A0A097BYJ7	Leuconostoc_phage	3.5e-31	29.6
WP_096836097.1\|653708_654362_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003571956.1\|654490_654769_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005690517.1\|654865_655261_+	hypothetical protein	NA	NA	NA	NA
WP_096836099.1\|655371_655563_+	hypothetical protein	NA	NA	NA	NA
WP_064520392.1\|655610_655883_+	hypothetical protein	NA	NA	NA	NA
WP_016366752.1\|655879_656068_+	hypothetical protein	NA	NA	NA	NA
WP_096836101.1\|656051_656879_+	bifunctional DNA primase/polymerase	Q854C1	Mycobacterium_phage	4.5e-12	32.5
WP_049166530.1\|656871_658263_+	DNA primase	A0A0M4RE09	Enterococcus_phage	1.4e-42	34.0
WP_049166529.1\|658614_658956_+	hypothetical protein	NA	NA	NA	NA
WP_183406784.1\|659039_659414_+	HNH endonuclease	D2JLE2	Staphylococcus_phage	8.4e-11	39.8
WP_049166528.1\|659538_660009_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_096836105.1\|660005_661709_+\|terminase	terminase	E9LUI0	Lactobacillus_phage	1.7e-119	40.0
WP_016386406.1\|661674_661854_+	hypothetical protein	NA	NA	NA	NA
WP_096836107.1\|661858_663043_+\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	1.8e-59	34.7
WP_096836109.1\|663029_664571_+\|capsid	phage major capsid protein	A0A2H4J9X8	uncultured_Caudovirales_phage	1.0e-33	30.1
WP_075761396.1\|664633_664924_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_096836110.1\|664907_665249_+\|head	phage head closure protein	I7AUE6	Enterococcus_phage	3.6e-08	37.0
668090:668106	attR	NA	NA	NA	NA

DBSCAN-SWA_6

682307 : 743822

Cafeteria_roenbergensis_virus(15.38%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003564470.1\|682307_682604_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_003598273.1\|682607_684062_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_003578560.1\|684063_685494_+\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_003564476.1\|685766_686801_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	2.2e-16	28.1
WP_016373214.1\|686793_688167_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	1.1e-127	51.3
WP_029507390.1\|688760_689972_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	1.2e-53	34.1
WP_013245625.1\|690000_690837_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003601915.1\|690916_691792_-	PPK2 family polyphosphate--nucleotide phosphotransferase	NA	NA	NA	NA
WP_003601917.1\|691960_693865_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	1.6e-57	27.0
WP_016386361.1\|693984_695409_+	MFS transporter	NA	NA	NA	NA
WP_003598288.1\|695494_695947_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003569778.1\|696244_697117_-	DegV family protein	NA	NA	NA	NA
WP_003574021.1\|697276_698197_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_096836114.1\|698331_699348_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.6e-35	33.1
WP_003578571.1\|699621_700548_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_003574445.1\|701716_702454_+	lysozyme	NA	NA	NA	NA
WP_003564501.1\|702586_702943_+	YxeA family protein	NA	NA	NA	NA
WP_003598290.1\|703154_703511_-	DUF4828 domain-containing protein	NA	NA	NA	NA
WP_003564506.1\|703857_704811_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003578577.1\|704824_706111_+	DEAD/DEAH box helicase	E3T5E1	Cafeteria_roenbergensis_virus	2.1e-32	26.6
WP_003569787.1\|706110_706479_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_003564512.1\|706552_706975_+	DUF3284 domain-containing protein	NA	NA	NA	NA
WP_003564514.1\|707272_707995_+	hypothetical protein	NA	NA	NA	NA
WP_003598291.1\|708080_709859_+	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	3.0e-74	35.4
WP_003598292.1\|710012_711248_-	aminopeptidase	NA	NA	NA	NA
WP_003598293.1\|711572_712181_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003601952.1\|712570_713944_+	DUF2252 domain-containing protein	NA	NA	NA	NA
WP_016385834.1\|714084_715092_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_003564526.1\|715177_715639_-	flavodoxin	NA	NA	NA	NA
WP_003601954.1\|715889_716714_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_003601955.1\|716992_718054_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003601956.1\|718272_718530_-	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_003564534.1\|718545_718755_-	hypothetical protein	NA	NA	NA	NA
WP_003601957.1\|719133_720210_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_096836077.1\|720225_721146_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.6e-21	34.5
WP_003574465.1\|721419_722334_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	2.2e-73	49.0
WP_016385819.1\|722560_723859_+\|protease	Zn-dependent protease M10 family	NA	NA	NA	NA
WP_096836116.1\|726588_727452_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	9.0e-24	30.5
WP_096836118.1\|729416_731270_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_016386364.1\|731356_732187_-	PRD domain-containing protein	NA	NA	NA	NA
WP_003601580.1\|732729_735393_-	YfhO family protein	NA	NA	NA	NA
WP_071798946.1\|735703_737443_+	hypothetical protein	NA	NA	NA	NA
WP_003601582.1\|737621_738551_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	7.8e-74	47.7
WP_016378353.1\|738637_739276_-	YkyA family protein	NA	NA	NA	NA
WP_003566523.1\|739403_740369_+	hypothetical protein	NA	NA	NA	NA
WP_003658399.1\|740515_740644_+	hypothetical protein	NA	NA	NA	NA
WP_003601584.1\|741327_741528_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.0e-19	66.2
WP_003585301.1\|741693_741891_+	hypothetical protein	NA	NA	NA	NA
WP_003585300.1\|741865_742219_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_011674296.1\|742319_743822_+\|transposase	IS66 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

1114548 : 1211929

Lactobacillus_phage(30.3%)

transposase,portal,integrase,holin,terminase,tRNA,capsid,tail,head

attL 1143671:1143730|attR 1176490:1176649

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003565615.1\|1114548_1115847_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.0e-50	27.9
WP_003602342.1\|1115877_1117053_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003602344.1\|1117107_1117596_-	DUF5590 domain-containing protein	NA	NA	NA	NA
WP_096836177.1\|1117898_1120685_-	ribonuclease H-like domain-containing protein	A0A1X9I5C8	Streptococcus_phage	6.3e-42	28.8
WP_096836179.1\|1120723_1124428_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	1.0e-15	22.4
WP_096836181.1\|1124424_1127964_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_003602348.1\|1128314_1129250_+	mevalonate kinase	NA	NA	NA	NA
WP_003575170.1\|1129257_1130262_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_003602350.1\|1130227_1131262_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_096836182.1\|1131750_1133082_-	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA
WP_003602353.1\|1133068_1134025_-	ABC transporter permease	NA	NA	NA	NA
WP_003602355.1\|1134077_1134821_-	hypothetical protein	NA	NA	NA	NA
WP_003565641.1\|1134914_1135265_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_003565643.1\|1135316_1135505_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_003602357.1\|1135647_1136442_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_003565647.1\|1136428_1137139_-\|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	NA	NA	NA	NA
WP_003565648.1\|1137354_1138623_-	RNA polymerase sigma factor RpoD	F4YCU2	Synechococcus_phage	1.1e-38	38.9
WP_003602358.1\|1138636_1140424_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.6e-54	31.0
WP_003602359.1\|1140616_1142686_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003602360.1\|1142687_1143584_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
1143671:1143730	attL	NA	NA	NA	NA
WP_096836184.1\|1143975_1145145_-\|integrase	site-specific integrase	A0A2P0ZL94	Lactobacillus_phage	7.6e-42	31.5
WP_029943783.1\|1145187_1145514_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016372179.1\|1146490_1146751_+	hypothetical protein	NA	NA	NA	NA
WP_096836186.1\|1146820_1147045_-	hypothetical protein	A0A0P0IUZ5	Lactobacillus_phage	4.4e-31	94.6
WP_096836189.1\|1147089_1148247_-	LysM peptidoglycan-binding domain-containing protein	A0A0P0HRN9	Lactobacillus_phage	1.8e-131	62.2
WP_016372181.1\|1148249_1148582_-\|holin	phage holin	Q3L0R7	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	2.6e-32	100.0
WP_016378024.1\|1148594_1148828_-	hypothetical protein	Q3L0R9	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.7e-33	94.8
WP_096836192.1\|1148852_1148984_-	XkdX family protein	Q3L0S0	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	4.2e-18	90.7
WP_096836194.1\|1148976_1149267_-	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	3.6e-41	85.4
WP_096836196.1\|1149276_1151961_-\|tail	phage tail protein	Q3L0S2	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	0.0e+00	82.8
WP_096836198.1\|1151961_1153899_-\|tail	phage tail family protein	Q7Y4B1	Lactobacillus_phage	1.9e-303	79.7
WP_096836200.1\|1153899_1158576_-	tape measure protein	Q3L0S4	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	7.8e-154	50.9
WP_016375976.1\|1158582_1158822_-	hypothetical protein	Q3L0S5	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	7.7e-18	54.4
WP_016375975.1\|1158790_1159150_-\|tail	putative phage tail protein	Q3L0S6	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.5e-20	49.1
WP_096836202.1\|1159313_1159922_-\|tail	phage tail protein	A8YQJ7	Lactobacillus_phage	1.3e-101	92.1
WP_096836204.1\|1159922_1160303_-	DUF806 family protein	Q3L0S8	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	3.7e-62	93.7
WP_096836206.1\|1160299_1160719_-	HK97 gp10 family phage protein	Q3L0S9	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.7e-60	85.6
WP_096836208.1\|1160721_1161066_-\|head	phage head closure protein	A8YQJ4	Lactobacillus_phage	4.2e-49	83.9
WP_096836209.1\|1161055_1161340_-	hypothetical protein	NA	NA	NA	NA
WP_096836212.1\|1161411_1163205_-\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	6.0e-62	34.3
WP_096836213.1\|1163197_1164304_-\|portal	phage portal protein	Q9AZM4	Lactococcus_phage	2.5e-79	43.6
WP_183406786.1\|1164300_1164483_-	DUF1056 family protein	NA	NA	NA	NA
WP_096836217.1\|1164607_1166500_-\|terminase	terminase large subunit	A0A0M7RDK9	Lactobacillus_phage	2.7e-153	44.0
WP_014569686.1\|1166493_1166958_-\|terminase	phage terminase small subunit P27 family	B8R648	Lactobacillus_phage	3.1e-23	39.7
WP_094515910.1\|1167710_1168497_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_096836218.1\|1169412_1169922_-	hypothetical protein	NA	NA	NA	NA
WP_157780095.1\|1169922_1170099_-	hypothetical protein	NA	NA	NA	NA
WP_183406787.1\|1170095_1170638_-	HNH endonuclease	B8R694	Lactobacillus_phage	2.4e-30	45.1
WP_096836222.1\|1170634_1171018_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_096836223.1\|1171010_1171781_-	hypothetical protein	NA	NA	NA	NA
WP_096836225.1\|1171770_1171992_-	hypothetical protein	NA	NA	NA	NA
WP_096836227.1\|1172054_1172663_-	HNH endonuclease	A0A126HDE2	Lactococcus_phage	9.5e-12	30.6
WP_096836229.1\|1172972_1174205_-	hypothetical protein	NA	NA	NA	NA
WP_096836231.1\|1175918_1176197_-	hypothetical protein	NA	NA	NA	NA
WP_096836232.1\|1177068_1177377_-	hypothetical protein	NA	NA	NA	NA
1176490:1176649	attR	NA	NA	NA	NA
WP_094515910.1\|1177408_1178196_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003602393.1\|1178381_1178693_-	hypothetical protein	NA	NA	NA	NA
WP_016377725.1\|1178943_1179723_-	DNA repair protein RecO	NA	NA	NA	NA
WP_003565663.1\|1179722_1180625_-	GTPase Era	NA	NA	NA	NA
WP_003570376.1\|1180621_1181011_-	cytidine deaminase	NA	NA	NA	NA
WP_003565665.1\|1181012_1181411_-	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_003565667.1\|1181394_1181853_-	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_003602397.1\|1181856_1182843_-	PhoH family protein	H6X2N1	Pseudomonas_phage	1.9e-49	46.5
WP_016386243.1\|1183176_1183611_-	GatB/YqeY domain-containing protein	NA	NA	NA	NA
WP_003565673.1\|1183639_1183816_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_003565675.1\|1184119_1184950_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_003602399.1\|1184946_1185834_-	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	1.8e-22	28.1
WP_003565679.1\|1185969_1186890_-	YitT family protein	NA	NA	NA	NA
WP_003602400.1\|1186981_1187434_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_016386242.1\|1187523_1189329_-\|tRNA	aspartate--tRNA ligase	A0A2K9KZX5	Tupanvirus	8.0e-06	34.4
WP_003594587.1\|1189330_1190614_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_016386241.1\|1191133_1191460_+	inorganic diphosphatase	NA	NA	NA	NA
WP_016386240.1\|1193090_1193966_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-22	32.5
WP_003602403.1\|1194211_1194652_+	diadenosine tetraphosphate hydrolase-related HIT family hydrolase	NA	NA	NA	NA
WP_003602405.1\|1194790_1196113_+	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	8.4e-13	32.2
WP_011674532.1\|1196185_1196812_-	HAD family hydrolase	NA	NA	NA	NA
WP_003565699.1\|1196811_1197258_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_096836234.1\|1197378_1199607_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	J9Q7H7	Salmonella_phage	1.5e-06	34.3
WP_003602408.1\|1199843_1200167_-	hypothetical protein	NA	NA	NA	NA
WP_003590908.1\|1200193_1200934_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_003590917.1\|1202129_1202624_-	DUF3013 family protein	NA	NA	NA	NA
WP_018041523.1\|1202620_1203226_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_003575242.1\|1203331_1203580_+	hypothetical protein	NA	NA	NA	NA
WP_003602417.1\|1203649_1204036_-	YxeA family protein	NA	NA	NA	NA
WP_003565717.1\|1204498_1204681_-	hypothetical protein	NA	NA	NA	NA
WP_003565719.1\|1204680_1205067_-	hypothetical protein	NA	NA	NA	NA
WP_032797982.1\|1205246_1205735_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_016378566.1\|1206178_1206364_-	hypothetical protein	NA	NA	NA	NA
WP_003602421.1\|1207031_1207622_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003602423.1\|1207614_1208181_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003565728.1\|1211092_1211407_-	DUF960 domain-containing protein	NA	NA	NA	NA
WP_003575271.1\|1211425_1211929_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA

DBSCAN-SWA_8

1417010 : 1427286

Aichi_virus(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003602660.1\|1417010_1418423_-	sugar porter family MFS transporter	O13311	Aichi_virus	1.9e-26	27.5
WP_003602661.1\|1418721_1420449_-	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	2.9e-21	30.8
WP_003566007.1\|1420448_1420715_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003566008.1\|1420858_1421050_-	hypothetical protein	NA	NA	NA	NA
WP_003658650.1\|1421398_1423495_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	9.3e-115	39.8
WP_003570563.1\|1423615_1423909_+	DUF1827 family protein	NA	NA	NA	NA
WP_003597552.1\|1423999_1424698_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.3e-22	31.7
WP_096836256.1\|1424634_1425543_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.4e-11	29.1
WP_003566014.1\|1425711_1427286_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	3.4e-29	26.0

DBSCAN-SWA_9

1497933 : 1588385

111

Lactobacillus_phage(64.91%)

transposase,portal,integrase,holin,terminase,tRNA,capsid,tail,head

attL 1543525:1543551|attR 1586826:1586852

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003573322.1\|1497933_1499217_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.4e-84	48.0
WP_003599137.1\|1499588_1501166_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003599138.1\|1501426_1502956_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003602714.1\|1503019_1504474_-	amino acid permease	NA	NA	NA	NA
WP_016365770.1\|1504987_1505131_-	hypothetical protein	NA	NA	NA	NA
WP_003566135.1\|1505215_1505926_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_003599140.1\|1505984_1507661_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_003602715.1\|1507972_1508524_-	hypothetical protein	NA	NA	NA	NA
WP_003599144.1\|1508643_1509168_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_016385913.1\|1509770_1510805_+	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA
WP_003566145.1\|1511102_1511678_+	hypothetical protein	NA	NA	NA	NA
WP_003602719.1\|1511740_1511890_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_003588188.1\|1512107_1512725_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.3e-58	53.5
WP_003599164.1\|1512828_1513710_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003602720.1\|1513843_1514653_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003599167.1\|1514804_1515386_-	hypothetical protein	NA	NA	NA	NA
WP_003566163.1\|1515609_1516035_+	hypothetical protein	E3W8I0	Leuconostoc_phage	1.4e-06	35.8
WP_003599172.1\|1515988_1516831_-	triphosphoribosyl-dephospho-CoA synthase CitG	NA	NA	NA	NA
WP_003566168.1\|1516823_1517519_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003599174.1\|1517655_1519059_-	oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_003602722.1\|1519296_1519845_-	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
WP_003602723.1\|1519837_1521370_-	citrate lyase subunit alpha	NA	NA	NA	NA
WP_003566178.1\|1521369_1522248_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_003566181.1\|1522235_1522541_-	citrate lyase acyl carrier protein	NA	NA	NA	NA
WP_003599176.1\|1522530_1523535_-	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
WP_003566186.1\|1523536_1523680_-	OadG family protein	NA	NA	NA	NA
WP_016385912.1\|1523853_1524978_-	sodium ion-translocating decarboxylase subunit beta	NA	NA	NA	NA
WP_016385911.1\|1524992_1525391_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_016385910.1\|1525396_1525723_-	hypothetical protein	NA	NA	NA	NA
WP_003579853.1\|1525821_1527171_-	citrate transporter	NA	NA	NA	NA
WP_003566197.1\|1527455_1527713_-	hypothetical protein	NA	NA	NA	NA
WP_003599179.1\|1527786_1528353_-	RNA 2'-phosphotransferase	G3MA21	Bacillus_virus	1.5e-19	36.0
WP_003599180.1\|1528399_1528894_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003566203.1\|1528908_1529526_-	NADPH-dependent F420 reductase	NA	NA	NA	NA
WP_003599181.1\|1529788_1530127_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_016385909.1\|1530123_1530981_+	membrane protein	NA	NA	NA	NA
WP_003599183.1\|1531074_1531830_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_016385907.1\|1532455_1533373_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.2e-20	27.0
WP_016385906.1\|1533359_1534976_+	ABC transporter permease	NA	NA	NA	NA
WP_003599186.1\|1534972_1535611_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_012490951.1\|1535735_1536734_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.5e-49	38.4
WP_016386109.1\|1536817_1538227_-	MFS transporter	NA	NA	NA	NA
WP_016386108.1\|1538389_1539127_+	sulfite exporter TauE/SafE family protein	Q6EVM7	Oenoccocus_phage	8.5e-47	42.9
WP_016386107.1\|1539246_1540281_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003599206.1\|1540365_1541217_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003566227.1\|1541398_1541776_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003574021.1\|1542154_1543075_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
1543525:1543551	attL	NA	NA	NA	NA
WP_096836274.1\|1543658_1544030_+	acetyl-CoA carboxyl transferase	NA	NA	NA	NA
WP_016378596.1\|1544136_1545072_-	hypothetical protein	Q8HA04	Enterobacteria_phage	1.5e-43	36.5
WP_096836275.1\|1545232_1546285_-	peptidoglycan recognition protein	A0A1B0Y4R9	Lactobacillus_phage	2.9e-202	96.9
WP_096836277.1\|1546286_1546559_-\|holin	holin	Q9MCC7	Lactobacillus_phage	3.1e-39	93.3
WP_096836279.1\|1546548_1546782_-	hypothetical protein	U5U779	Lactobacillus_phage	6.8e-11	72.4
WP_096836281.1\|1546774_1547152_-	hypothetical protein	U5U712	Lactobacillus_phage	3.6e-62	94.4
WP_016386025.1\|1547306_1547597_-	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	2.0e-20	51.1
WP_096836285.1\|1547598_1550517_-\|tail	phage tail protein	Q3L0S2	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	0.0e+00	64.7
WP_096836287.1\|1550517_1552464_-\|tail	phage tail family protein	Q3L0S3	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	8.8e-269	73.6
WP_096836289.1\|1552464_1555554_-	tape measure protein	A0A0P0IJD2	Lactobacillus_phage	3.6e-264	87.8
WP_096836532.1\|1555546_1555900_-	hypothetical protein	A0A0P0I7N9	Lactobacillus_phage	6.9e-55	95.7
WP_016376572.1\|1556004_1556337_-\|tail	tail assembly chaperone	A0A0P0IQQ6	Lactobacillus_phage	6.7e-52	98.2
WP_096836290.1\|1556414_1557014_-\|tail	phage tail protein	A0A0N7IR90	Lactobacillus_phage	9.5e-97	94.2
WP_096836292.1\|1557025_1557430_-	DUF3168 domain-containing protein	A0A0P0I3C8	Lactobacillus_phage	3.0e-70	98.5
WP_016377792.1\|1557430_1557796_-	hypothetical protein	A0A0P0I3G7	Lactobacillus_phage	2.4e-55	90.9
WP_096836294.1\|1557792_1558095_-	hypothetical protein	A0A0P0HRN0	Lactobacillus_phage	1.6e-47	90.0
WP_096836296.1\|1558099_1558474_-\|head,tail	phage head-tail connector protein	A0A0P0IZF6	Lactobacillus_phage	2.0e-60	95.2
WP_096836298.1\|1558473_1559352_-	hypothetical protein	A0A0P0IJL6	Lactobacillus_phage	2.6e-151	83.2
WP_084413647.1\|1559420_1560467_-\|capsid	major capsid protein	A0A0P0IZJ7	Lactobacillus_phage	3.8e-186	97.6
WP_096836300.1\|1560480_1560795_-	hypothetical protein	A0A0N7IR89	Lactobacillus_phage	4.7e-47	94.2
WP_096836302.1\|1560807_1561446_-	DUF4355 domain-containing protein	A0A0P0ID10	Lactobacillus_phage	1.8e-85	95.8
WP_096836305.1\|1561563_1561926_-	hypothetical protein	A0A141E1N9	Streptococcus_phage	9.0e-18	56.0
WP_096836306.1\|1561942_1562383_-	hypothetical protein	NA	NA	NA	NA
WP_096836308.1\|1562394_1563381_-\|capsid	minor capsid protein	A0A0P0ID43	Lactobacillus_phage	1.3e-175	94.8
WP_096836310.1\|1563346_1564774_-\|portal	phage portal protein	A0A0P0IJV3	Lactobacillus_phage	8.2e-256	95.6
WP_096836312.1\|1564778_1566032_-\|terminase	PBSX family phage terminase large subunit	A0A0P0I3B0	Lactobacillus_phage	4.0e-246	98.1
WP_096836313.1\|1566015_1566588_-\|terminase	terminase small subunit	A0A0P0IUY4	Lactobacillus_phage	2.2e-79	94.2
WP_016385955.1\|1566973_1568122_-	phage protein	A0A0P0I3G0	Lactobacillus_phage	2.9e-219	96.9
WP_096836315.1\|1568543_1568753_+	CsbD family protein	NA	NA	NA	NA
WP_128517163.1\|1568861_1569104_-	hypothetical protein	NA	NA	NA	NA
WP_032797607.1\|1569351_1569825_-	SocA family protein	Q9AZG0	Lactococcus_phage	5.8e-25	40.0
WP_032797608.1\|1570353_1570797_-	autolysin regulatory protein arpU	A0A0P0IZI6	Lactobacillus_phage	1.6e-77	95.9
WP_016365722.1\|1571281_1571500_-	helix-turn-helix transcriptional regulator	A0A0P0IXA5	Lactobacillus_phage	4.3e-31	94.4
WP_096836317.1\|1571680_1572025_-	hypothetical protein	NA	NA	NA	NA
WP_096836319.1\|1572025_1572391_-	hypothetical protein	C1KFE9	Lactobacillus_virus	1.5e-33	63.9
WP_096836321.1\|1572387_1572690_-	hypothetical protein	NA	NA	NA	NA
WP_096836322.1\|1572686_1573058_-	hypothetical protein	B4XYT7	Lactobacillus_phage	1.4e-18	49.2
WP_096836324.1\|1573047_1573260_-	hypothetical protein	NA	NA	NA	NA
WP_096836326.1\|1573249_1573795_-	DUF1642 domain-containing protein	Q8LTB6	Lactobacillus_phage	2.0e-37	54.2
WP_096836328.1\|1573791_1573974_-	hypothetical protein	A8YQM8	Lactobacillus_phage	1.4e-24	86.7
WP_096836329.1\|1573970_1574753_-	DNA (cytosine-5-)-methyltransferase	A8YQM6	Lactobacillus_phage	3.8e-138	94.9
WP_032797610.1\|1574749_1575001_-	hypothetical protein	NA	NA	NA	NA
WP_005686928.1\|1575012_1575396_-	DUF1064 domain-containing protein	B4XYT1	Lactobacillus_phage	1.2e-60	89.0
WP_096836331.1\|1575398_1575848_-	hypothetical protein	A0A0P0ID70	Lactobacillus_phage	9.0e-60	81.9
WP_032964570.1\|1575844_1576060_-	helix-turn-helix transcriptional regulator	A0A0P0IJY1	Lactobacillus_phage	2.6e-20	67.1
WP_096836333.1\|1576367_1576853_-	single-stranded DNA-binding protein	U5U726	Lactobacillus_phage	1.1e-63	89.4
WP_096836335.1\|1576864_1577827_-	DUF4373 domain-containing protein	A0A0P0HRQ2	Lactobacillus_phage	1.4e-161	92.8
WP_096836337.1\|1577838_1578603_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	3.9e-79	55.2
WP_045601324.1\|1578622_1579489_-	recombinase RecT	A0A1X9I5N6	Streptococcus_phage	5.1e-59	53.6
WP_096836339.1\|1579502_1579673_-	hypothetical protein	NA	NA	NA	NA
WP_080940780.1\|1579674_1579917_-	hypothetical protein	NA	NA	NA	NA
WP_003581994.1\|1580035_1580362_-	hypothetical protein	NA	NA	NA	NA
WP_096836341.1\|1580352_1580826_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011674683.1\|1580888_1581047_-	hypothetical protein	NA	NA	NA	NA
WP_040167039.1\|1581135_1581336_+	KTSC domain-containing protein	A0A1S5S8T9	Streptococcus_phage	5.3e-12	50.0
WP_155598324.1\|1581332_1581482_-	hypothetical protein	A0A1B0Y2Q8	Lactobacillus_phage	3.4e-16	87.8
WP_096836343.1\|1581478_1581721_-	helix-turn-helix transcriptional regulator	A0A0P0HRP5	Lactobacillus_phage	1.2e-34	95.0
WP_003574523.1\|1581855_1582194_+	helix-turn-helix transcriptional regulator	A0A0P0IZG9	Lactobacillus_phage	6.6e-55	98.2
WP_096836345.1\|1582183_1582603_+	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	7.6e-77	98.6
WP_096836347.1\|1582660_1583212_+	DUF5067 domain-containing protein	NA	NA	NA	NA
WP_096836348.1\|1583302_1584004_+	DUF3862 domain-containing protein	A9D9J1	Lactobacillus_prophage	4.3e-24	38.7
WP_096836351.1\|1584253_1585387_+	Abi family protein	NA	NA	NA	NA
WP_096836353.1\|1585503_1586667_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5S8Y2	Streptococcus_phage	2.6e-42	31.1
WP_003566292.1\|1586831_1588385_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.8e-14	28.4
1586826:1586852	attR	NA	NA	NA	NA

DBSCAN-SWA_10

1645358 : 1680061

Pectobacterium_phage(14.29%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003570829.1\|1645358_1646633_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	2.7e-85	43.1
WP_003566598.1\|1647166_1648111_-	cation transporter	NA	NA	NA	NA
WP_003566600.1\|1648287_1648623_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003580097.1\|1648797_1649727_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_003600202.1\|1650174_1651953_-	glycoside hydrolase family 13 protein	NA	NA	NA	NA
WP_003600200.1\|1652202_1654611_-	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-12	42.0
WP_003602866.1\|1654826_1656272_-	glycogen synthase GlgA	NA	NA	NA	NA
WP_003602867.1\|1656264_1657434_-	glucose-1-phosphate adenylyltransferase subunit GlgD	NA	NA	NA	NA
WP_016378692.1\|1657430_1658573_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_096836363.1\|1658569_1660669_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_003602870.1\|1661045_1662077_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_096836365.1\|1662343_1663246_-	sortase	NA	NA	NA	NA
WP_003580111.1\|1663603_1664434_-	YitT family protein	M1Q1P6	Streptococcus_phage	2.4e-18	26.5
WP_096836367.1\|1664900_1665167_-	fructose-bisphosphatase class III	NA	NA	NA	NA
WP_003574021.1\|1665193_1666114_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003602889.1\|1666129_1667887_-	fructose-bisphosphatase class III	NA	NA	NA	NA
WP_003570841.1\|1668320_1668722_-	transcriptional regulator Spx	NA	NA	NA	NA
WP_003602890.1\|1669355_1671506_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A0A8J958	Klebsiella_phage	5.2e-121	36.5
WP_003602891.1\|1671876_1672641_-	hypothetical protein	NA	NA	NA	NA
WP_003602892.1\|1672818_1673712_+	LCP family protein	NA	NA	NA	NA
WP_049152602.1\|1674847_1676266_-\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_096836369.1\|1676351_1677770_-\|transposase	IS5-like element ISLca2 family transposase	NA	NA	NA	NA
WP_080595781.1\|1677814_1678723_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-12	30.2
WP_096836371.1\|1679044_1680061_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.9e-36	33.4

DBSCAN-SWA_11

1794671 : 1832367

Staphylococcus_phage(40.0%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836391.1\|1794671_1795834_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.4e-29	32.1
WP_016386370.1\|1796597_1797605_+	hypothetical protein	NA	NA	NA	NA
WP_003586222.1\|1798677_1799418_+	hypothetical protein	NA	NA	NA	NA
WP_025600146.1\|1799587_1799803_+	hypothetical protein	NA	NA	NA	NA
WP_096836393.1\|1800462_1801250_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003603074.1\|1801577_1801697_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003603079.1\|1802297_1803212_-	UPF0104 family protein	NA	NA	NA	NA
WP_016385900.1\|1804008_1804533_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_011674296.1\|1804633_1806136_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_003603095.1\|1806874_1807945_-	metallophosphoesterase	NA	NA	NA	NA
WP_003605762.1\|1807970_1808885_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_003603101.1\|1808960_1809929_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003603103.1\|1810219_1811425_+	acetate kinase	NA	NA	NA	NA
WP_003603106.1\|1812021_1812909_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.7e-22	27.8
WP_096836394.1\|1812911_1814183_+	ABC transporter permease	NA	NA	NA	NA
WP_003566897.1\|1814196_1814592_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003603108.1\|1814581_1815448_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.8e-17	28.5
WP_003603109.1\|1815440_1816085_+	ABC-2 transporter permease	NA	NA	NA	NA
WP_003571168.1\|1816192_1816978_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	1.0e-13	27.5
WP_003588501.1\|1817606_1818728_+	alanine dehydrogenase	NA	NA	NA	NA
WP_003599602.1\|1818740_1819760_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_003603118.1\|1821886_1822243_+	hypothetical protein	NA	NA	NA	NA
WP_096836396.1\|1822379_1823807_+	C69 family dipeptidase	NA	NA	NA	NA
WP_096836398.1\|1823908_1825240_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003588511.1\|1825445_1826864_-	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_003599615.1\|1827154_1827721_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_096836400.1\|1827965_1828982_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.2e-37	33.8
WP_096836402.1\|1830951_1832367_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1944362 : 2011167

Bacillus_phage(16.67%)

protease,bacteriocin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836408.1\|1944362_1945769_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.5e-52	30.6
WP_003603233.1\|1946009_1947404_-	FAD-binding protein	NA	NA	NA	NA
WP_003603234.1\|1947529_1948117_-	hypothetical protein	NA	NA	NA	NA
WP_003576205.1\|1948116_1948308_-	hypothetical protein	NA	NA	NA	NA
WP_003576207.1\|1948783_1950277_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_003588680.1\|1950424_1951405_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003603236.1\|1951520_1952192_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
WP_003603237.1\|1952375_1953206_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003603238.1\|1953352_1954192_-\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_003603239.1\|1954204_1955221_-	hypothetical protein	NA	NA	NA	NA
WP_003567242.1\|1955227_1955602_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_016371648.1\|1955766_1957038_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_011674977.1\|1958044_1959061_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.4e-36	33.4
WP_003603253.1\|1959341_1960229_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-34	40.5
WP_003567252.1\|1960531_1961647_-	PIN/TRAM domain-containing protein	NA	NA	NA	NA
WP_016386262.1\|1961669_1963034_-	DNA repair protein RadA	NA	NA	NA	NA
WP_003567256.1\|1963050_1963593_-	dUTP diphosphatase	J9PV85	Bacillus_phage	8.1e-39	48.6
WP_003567258.1\|1963813_1964104_+	N-acetyltransferase	NA	NA	NA	NA
WP_003567260.1\|1964220_1964598_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003603256.1\|1964842_1966162_+	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	7.0e-60	34.5
WP_003603257.1\|1966520_1967867_+	C1 family peptidase	A0A2H4UTL8	Bodo_saltans_virus	6.9e-47	29.8
WP_003599703.1\|1968094_1969195_+	hypothetical protein	NA	NA	NA	NA
WP_003661801.1\|1969191_1970388_+	hypothetical protein	NA	NA	NA	NA
WP_003567269.1\|1970450_1971329_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-12	26.4
WP_003599714.1\|1971490_1973545_+	KUP/HAK/KT family potassium transporter	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	1.6e-63	32.9
WP_016365316.1\|1973701_1976332_-	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.6e-87	40.0
WP_003576237.1\|1976493_1977117_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003603261.1\|1977616_1978288_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_003567280.1\|1979931_1980216_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_003588738.1\|1980406_1981522_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003567284.1\|1981709_1981916_-	CsbD family protein	NA	NA	NA	NA
WP_003567286.1\|1982048_1982306_-	hypothetical protein	NA	NA	NA	NA
WP_003567288.1\|1982376_1982583_-	hypothetical protein	NA	NA	NA	NA
WP_003603264.1\|1983386_1984619_+	MFS transporter	NA	NA	NA	NA
WP_003599729.1\|1984697_1985954_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.6e-99	56.8
WP_003599730.1\|1986042_1986876_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	7.3e-47	42.4
WP_003588746.1\|1987192_1987387_-	hypothetical protein	NA	NA	NA	NA
WP_003571396.1\|1987640_1988177_-	hypothetical protein	NA	NA	NA	NA
WP_003603266.1\|1988365_1989589_-	hypothetical protein	NA	NA	NA	NA
WP_003599733.1\|1989824_1990652_-	class C sortase	NA	NA	NA	NA
WP_003603268.1\|1990658_1992218_-	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_096836412.1\|1992214_1993537_-	pilus assembly protein	NA	NA	NA	NA
WP_003567312.1\|1998316_1998874_-	hypothetical protein	NA	NA	NA	NA
WP_016365506.1\|1998968_2000165_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_016377825.1\|2000373_2001429_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_003599756.1\|2001699_2002329_+	helix-turn-helix transcriptional regulator	A0A0S2MVM8	Bacillus_phage	1.6e-06	37.5
WP_003567322.1\|2002464_2002794_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_016386260.1\|2002790_2003579_+	hypothetical protein	NA	NA	NA	NA
WP_016385889.1\|2003852_2005268_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_050555697.1\|2005239_2006001_+	hypothetical protein	NA	NA	NA	NA
WP_003567328.1\|2006045_2006324_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003599758.1\|2006347_2006632_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567335.1\|2007219_2008575_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003580849.1\|2008880_2009192_-	hypothetical protein	NA	NA	NA	NA
WP_003603306.1\|2009787_2011167_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA

DBSCAN-SWA_13

2017889 : 2062123

Staphylococcus_phage(28.57%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003599800.1\|2017889_2018063_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003591780.1\|2018101_2018275_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_003567359.1\|2018596_2018821_+	hypothetical protein	NA	NA	NA	NA
WP_025376287.1\|2019622_2020435_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003599805.1\|2020718_2020877_-	hypothetical protein	NA	NA	NA	NA
WP_003603316.1\|2020992_2021349_-	hypothetical protein	NA	NA	NA	NA
WP_096836413.1\|2021378_2022062_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.1e-59	51.3
WP_003599810.1\|2022402_2022594_-	hypothetical protein	NA	NA	NA	NA
WP_003599812.1\|2022907_2023243_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003599817.1\|2024109_2024364_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_003603326.1\|2024924_2025878_-	aldo/keto reductase	A0A1V0SDE7	Indivirus	2.8e-10	24.9
WP_012490951.1\|2026098_2027097_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.5e-49	38.4
WP_096836415.1\|2027192_2027936_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_016386079.1\|2027961_2029125_+	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_003603330.1\|2029300_2030677_-	class II fumarate hydratase	NA	NA	NA	NA
WP_032797705.1\|2030809_2031568_-	hypothetical protein	NA	NA	NA	NA
WP_003599829.1\|2031859_2033467_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_003603333.1\|2033854_2036572_+	HAD-IC family P-type ATPase	M1HJQ2	Paramecium_bursaria_Chlorella_virus	1.7e-60	28.5
WP_003580900.1\|2036871_2037237_+	hypothetical protein	NA	NA	NA	NA
WP_003599833.1\|2037390_2038764_-	MFS transporter	NA	NA	NA	NA
WP_003599835.1\|2038803_2040333_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_003567401.1\|2040459_2040651_+	hypothetical protein	NA	NA	NA	NA
WP_003599837.1\|2040779_2041418_+	cation transporter	NA	NA	NA	NA
WP_003599840.1\|2041438_2041771_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003603334.1\|2041890_2042832_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_016377718.1\|2042828_2043725_-	metal ABC transporter permease	NA	NA	NA	NA
WP_003599846.1\|2043721_2044465_-	metal ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-15	30.9
WP_003599848.1\|2044740_2046207_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_003567416.1\|2046407_2046677_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_003567418.1\|2046765_2046885_-	putative metal homeostasis protein	NA	NA	NA	NA
WP_003576335.1\|2047085_2048003_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003599853.1\|2048242_2048884_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_003603337.1\|2049001_2049634_-	NUDIX hydrolase N-terminal domain-containing protein	NA	NA	NA	NA
WP_003599857.1\|2049790_2050315_-	hypothetical protein	NA	NA	NA	NA
WP_016386267.1\|2052601_2053504_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003567431.1\|2053747_2053897_+	hypothetical protein	NA	NA	NA	NA
WP_016378520.1\|2054045_2055065_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_003599864.1\|2055145_2055559_-	hypothetical protein	NA	NA	NA	NA
WP_032797876.1\|2056609_2058973_-	SEC10/PgrA surface exclusion domain-containing protein	NA	NA	NA	NA
WP_016386265.1\|2059308_2060070_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_080596464.1\|2060237_2060552_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_003597552.1\|2060579_2061278_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.3e-22	31.7
WP_096836417.1\|2061214_2062123_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-12	30.2

DBSCAN-SWA_14

2201193 : 2267263

unidentified_phage(27.27%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003600190.1\|2201193_2202210_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	6.4e-37	34.6
WP_003599974.1\|2202361_2204344_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.1e-93	37.1
WP_003567758.1\|2204422_2205301_-	proline iminopeptidase-family hydrolase	NA	NA	NA	NA
WP_003599976.1\|2205509_2206322_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_003599978.1\|2206314_2206794_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_003567764.1\|2206937_2207843_-	L-2-hydroxyisocaproate dehydrogenase	NA	NA	NA	NA
WP_003567766.1\|2207870_2208479_-	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003576531.1\|2208570_2209263_-	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_003567770.1\|2209546_2209693_+	hypothetical protein	NA	NA	NA	NA
WP_096836432.1\|2209689_2210616_-	hypothetical protein	NA	NA	NA	NA
WP_003581145.1\|2210868_2211378_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_003581148.1\|2211453_2211732_-	hypothetical protein	NA	NA	NA	NA
WP_003567776.1\|2211767_2212751_-	DUF1002 domain-containing protein	NA	NA	NA	NA
WP_003567778.1\|2212968_2213910_-	exopolyphosphatase	NA	NA	NA	NA
WP_003585697.1\|2213906_2216069_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA
WP_003599982.1\|2216065_2217595_-	exopolyphosphatase	NA	NA	NA	NA
WP_003603471.1\|2219198_2220023_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003585698.1\|2220045_2220546_+	N-acetyltransferase	NA	NA	NA	NA
WP_003567789.1\|2220732_2222088_-	MATE family efflux transporter	NA	NA	NA	NA
WP_003599986.1\|2222302_2223163_-	TPM domain-containing protein	NA	NA	NA	NA
WP_003599988.1\|2223171_2223780_-	LemA family protein	NA	NA	NA	NA
WP_003567794.1\|2223965_2224982_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003599990.1\|2225400_2226726_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003599992.1\|2226731_2227691_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.6e-27	32.4
WP_003599994.1\|2227690_2229223_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_003599996.1\|2229756_2232045_+	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_016377615.1\|2232179_2233013_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003600000.1\|2233037_2234009_-	TDT family transporter	NA	NA	NA	NA
WP_003600002.1\|2234444_2235089_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003600045.1\|2235612_2236287_-	HD domain-containing protein	S4W232	Pandoravirus	1.3e-14	31.4
WP_003600048.1\|2236414_2236831_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003600050.1\|2237043_2237211_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_003600052.1\|2237211_2239572_+	hypothetical protein	A0A1B1IVR3	uncultured_Mediterranean_phage	5.9e-110	33.2
WP_003600054.1\|2239637_2240642_-	aldo/keto reductase	NA	NA	NA	NA
WP_003603483.1\|2240942_2241755_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003567827.1\|2241817_2242162_-	hypothetical protein	NA	NA	NA	NA
WP_003567829.1\|2242469_2242733_+	hypothetical protein	NA	NA	NA	NA
WP_003600061.1\|2243021_2243699_+	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_003567833.1\|2243704_2244391_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_003567836.1\|2244435_2245248_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003600063.1\|2245344_2245827_+	ribonuclease HI	A0A0H3UZB5	Geobacillus_virus	3.1e-21	38.1
WP_003567840.1\|2245832_2246735_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003600064.1\|2246984_2248187_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	1.6e-23	27.5
WP_003600065.1\|2248491_2249685_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	5.5e-104	60.3
WP_003567846.1\|2250085_2250784_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_003603493.1\|2250941_2251415_-	hypothetical protein	NA	NA	NA	NA
WP_096836436.1\|2251431_2252361_-\|transposase	IS30-like element ISLpl1 family transposase	H7BW61	unidentified_phage	8.5e-20	30.8
WP_096836438.1\|2253045_2255028_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003603502.1\|2255031_2255961_-	1-phosphofructokinase	NA	NA	NA	NA
WP_003567854.1\|2256086_2256839_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003600071.1\|2256943_2258458_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_096836440.1\|2259058_2260261_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.9e-88	46.6
WP_003601468.1\|2260493_2261981_-	PTS galactitol IIC component	NA	NA	NA	NA
WP_003600074.1\|2262012_2262333_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003576630.1\|2262364_2262844_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_096836436.1\|2263562_2264492_+\|transposase	IS30-like element ISLpl1 family transposase	H7BW61	unidentified_phage	8.5e-20	30.8
WP_016386247.1\|2265847_2267263_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

2403418 : 2464217

unidentified_phage(16.67%)

protease,tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836465.1\|2403418_2404435_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.9e-36	33.4
WP_096836466.1\|2407262_2408348_+	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_096836468.1\|2408491_2409691_-	amidohydrolase	NA	NA	NA	NA
WP_003568415.1\|2409687_2410176_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003568534.1\|2410177_2410942_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003572790.1\|2411574_2413476_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_003572791.1\|2413517_2414906_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_003600670.1\|2415419_2416184_-	protein jag	NA	NA	NA	NA
WP_003572795.1\|2416201_2417038_-	membrane protein insertase YidC	NA	NA	NA	NA
WP_012492235.1\|2417182_2417539_-	ribonuclease P protein component	NA	NA	NA	NA
WP_003568442.1\|2417865_2418006_-	50S ribosomal protein L34	NA	NA	NA	NA
WP_003568444.1\|2418813_2420163_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_003600672.1\|2420335_2421475_+	DNA polymerase III subunit beta	D0R7I4	Paenibacillus_phage	5.0e-14	33.1
WP_003568449.1\|2422052_2422265_+	S4 domain-containing protein YaaA	NA	NA	NA	NA
WP_003600282.1\|2422261_2423377_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_003600283.1\|2423629_2425591_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.8e-145	46.4
WP_016385862.1\|2425652_2428274_+	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	4.9e-113	33.5
WP_003600673.1\|2428378_2429083_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_003568458.1\|2429265_2429697_+	single-stranded DNA-binding protein	A0A2I2MUI5	uncultured_Caudovirales_phage	1.3e-26	46.9
WP_003568460.1\|2429824_2430121_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_016378371.1\|2430151_2430760_+	single-stranded DNA-binding protein	U5U726	Lactobacillus_phage	4.2e-52	67.8
WP_003568467.1\|2430846_2431083_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_003600674.1\|2431523_2433002_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_003600287.1\|2434039_2434234_+	hypothetical protein	NA	NA	NA	NA
WP_096836470.1\|2434660_2435581_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	6.9e-22	35.0
WP_003600703.1\|2435726_2436029_-	hypothetical protein	NA	NA	NA	NA
WP_003577228.1\|2436428_2437664_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_003596885.1\|2437867_2440441_-	ABC transporter permease	NA	NA	NA	NA
WP_003596886.1\|2440453_2441155_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-33	40.5
WP_003592429.1\|2441451_2442003_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003596889.1\|2442046_2442853_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003577235.1\|2444928_2445702_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003600709.1\|2445879_2446485_+	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003568507.1\|2446608_2447502_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003568509.1\|2447550_2448189_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003568512.1\|2448417_2449794_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_003596899.1\|2450016_2450361_-	hypothetical protein	NA	NA	NA	NA
WP_003562540.1\|2450436_2450796_-	hypothetical protein	NA	NA	NA	NA
WP_016386168.1\|2451036_2452479_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003600713.1\|2452673_2453303_+	hypothetical protein	NA	NA	NA	NA
WP_096836472.1\|2453613_2454775_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.9e-29	32.5
WP_003562592.1\|2454943_2455606_-	ABC transporter permease	NA	NA	NA	NA
WP_096836474.1\|2455605_2456535_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003568628.1\|2456546_2457176_-	ABC transporter permease	NA	NA	NA	NA
WP_003596965.1\|2457178_2458432_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.5e-14	43.0
WP_003596967.1\|2459052_2459706_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_016378075.1\|2459771_2459993_-	hypothetical protein	NA	NA	NA	NA
WP_003596968.1\|2460116_2460302_-	hypothetical protein	NA	NA	NA	NA
WP_016385767.1\|2460338_2462195_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-66	32.7
WP_003562606.1\|2462214_2462442_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_003596972.1\|2462589_2463174_+	hypothetical protein	NA	NA	NA	NA
WP_096836470.1\|2463296_2464217_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	6.9e-22	35.0

DBSCAN-SWA_16

2472365 : 2525802

unidentified_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836083.1\|2472365_2473784_+\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_096836476.1\|2473785_2474013_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003597003.1\|2474005_2474461_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003600738.1\|2475033_2475747_-	SMUG2 DNA glycosylase family protein	NA	NA	NA	NA
WP_016386111.1\|2476083_2477223_+	hypothetical protein	NA	NA	NA	NA
WP_003597008.1\|2477860_2478049_+	hypothetical protein	NA	NA	NA	NA
WP_003600742.1\|2478165_2479995_-	MFS transporter	NA	NA	NA	NA
WP_003572955.1\|2480153_2480732_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003597012.1\|2480871_2481246_+	hypothetical protein	NA	NA	NA	NA
WP_096836541.1\|2481229_2481934_-	hypothetical protein	NA	NA	NA	NA
WP_011674296.1\|2481981_2483484_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_003585300.1\|2483584_2483938_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_003585301.1\|2483912_2484110_-	hypothetical protein	NA	NA	NA	NA
WP_003597016.1\|2484461_2485694_-	hypothetical protein	NA	NA	NA	NA
WP_003597018.1\|2485698_2486613_-	hypothetical protein	NA	NA	NA	NA
WP_003597020.1\|2486609_2487296_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-25	33.5
WP_011674296.1\|2488066_2489569_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_003585300.1\|2489669_2490023_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_003585301.1\|2489997_2490195_-	hypothetical protein	NA	NA	NA	NA
WP_003597022.1\|2490430_2490829_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_003597024.1\|2490791_2491061_-	hypothetical protein	NA	NA	NA	NA
WP_003597025.1\|2491210_2491978_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_003600754.1\|2491974_2492880_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_096836479.1\|2492972_2494124_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA
WP_003572973.1\|2494131_2494836_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA
WP_003600756.1\|2494846_2496193_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_003597032.1\|2496906_2498286_+	aspartate kinase	NA	NA	NA	NA
WP_003592633.1\|2498287_2499295_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_003597036.1\|2499298_2500357_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003562673.1\|2500552_2500930_+	hypothetical protein	NA	NA	NA	NA
WP_016378678.1\|2501304_2501508_+	hypothetical protein	NA	NA	NA	NA
WP_003597037.1\|2502082_2502496_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003600759.1\|2502488_2503355_+	DMT family transporter	NA	NA	NA	NA
WP_096835977.1\|2503503_2504424_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.6e-21	34.5
WP_003574021.1\|2504819_2505740_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_096836481.1\|2506085_2507504_+\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_016378584.1\|2507564_2507912_+	hypothetical protein	NA	NA	NA	NA
WP_003562684.1\|2508610_2510617_+	DHH family phosphoesterase	NA	NA	NA	NA
WP_003562688.1\|2510632_2511088_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_096836483.1\|2511701_2512718_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.4e-36	33.4
WP_016386095.1\|2513059_2514895_+	hypothetical protein	NA	NA	NA	NA
WP_100223497.1\|2514985_2516179_+	glycosyltransferase	NA	NA	NA	NA
WP_096836485.1\|2516074_2516862_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016386172.1\|2517111_2518389_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.9e-49	31.0
WP_016378972.1\|2518512_2518728_-	acetyltransferase	NA	NA	NA	NA
WP_003597469.1\|2519084_2519654_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_039639870.1\|2519661_2522607_+	ABC transporter permease	NA	NA	NA	NA
WP_003597463.1\|2522697_2522922_-	hypothetical protein	NA	NA	NA	NA
WP_096836487.1\|2523052_2523840_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_071799137.1\|2523867_2524311_+	glycosyltransferase	NA	NA	NA	NA
WP_096836489.1\|2524645_2525509_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.4e-24	30.5
WP_079322958.1\|2525505_2525802_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2544818 : 2602836

Acanthamoeba_polyphaga_mimivirus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096836543.1\|2544818_2545606_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016386247.1\|2546918_2548334_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_096836495.1\|2548534_2549950_-\|transposase	IS5-like element ISLca2 family transposase	NA	NA	NA	NA
WP_003600819.1\|2550202_2550439_+	hypothetical protein	NA	NA	NA	NA
WP_016378753.1\|2550672_2552034_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003597101.1\|2552757_2553042_-	hypothetical protein	NA	NA	NA	NA
WP_003600825.1\|2553508_2554489_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003600831.1\|2554705_2555782_-	LD-carboxypeptidase	NA	NA	NA	NA
WP_003562754.1\|2556003_2556255_+	hypothetical protein	NA	NA	NA	NA
WP_003600832.1\|2556408_2557482_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_003562762.1\|2557655_2558147_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	2.6e-15	39.7
WP_003573025.1\|2558213_2559215_+	D-2-hydroxyisocaproate dehydrogenase	M1HMI7	Paramecium_bursaria_Chlorella_virus	1.8e-47	34.5
WP_003577355.1\|2559297_2559594_-	hypothetical protein	NA	NA	NA	NA
WP_003573029.1\|2559755_2560262_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_096836496.1\|2560372_2561305_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_003600836.1\|2561429_2561792_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_004469170.1\|2562011_2562362_-	YisL family protein	NA	NA	NA	NA
WP_096836499.1\|2562430_2563447_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	4.2e-36	33.1
WP_003597113.1\|2563748_2565206_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	9.8e-39	28.7
WP_003600855.1\|2565346_2565670_+	DsrE family protein	NA	NA	NA	NA
WP_016386298.1\|2565741_2566716_-	ring-cleaving dioxygenase	NA	NA	NA	NA
WP_003562796.1\|2566908_2567205_+	hypothetical protein	NA	NA	NA	NA
WP_003597119.1\|2567459_2568035_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_096836501.1\|2568377_2570432_+	WxL domain-containing protein	NA	NA	NA	NA
WP_016378570.1\|2570809_2571583_+	WxL domain-containing protein	NA	NA	NA	NA
WP_003597129.1\|2572601_2573681_+	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA
WP_003562813.1\|2573905_2574139_+	hypothetical protein	NA	NA	NA	NA
WP_003597134.1\|2574135_2575596_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003597136.1\|2575736_2576723_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_096836502.1\|2576825_2578058_-\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.6e-10	23.3
WP_003573065.1\|2578253_2578583_-	hypothetical protein	NA	NA	NA	NA
WP_003598946.1\|2578763_2580110_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	5.1e-90	43.4
WP_003583008.1\|2580167_2581358_+	acetate kinase	NA	NA	NA	NA
WP_003598943.1\|2581458_2582283_-	serine/threonine protein phosphatase	A8AT52	Listeria_phage	1.2e-12	29.5
WP_003598941.1\|2582498_2583227_+	endonuclease III domain protein	NA	NA	NA	NA
WP_016385897.1\|2584294_2585554_+	hypothetical protein	NA	NA	NA	NA
WP_096836506.1\|2587135_2588551_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016386172.1\|2590243_2591521_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.9e-49	31.0
WP_003600905.1\|2591747_2592881_-	hypothetical protein	NA	NA	NA	NA
WP_003600903.1\|2593040_2593508_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_014566722.1\|2593556_2593766_-	hypothetical protein	NA	NA	NA	NA
WP_016378115.1\|2593771_2594047_-	hypothetical protein	NA	NA	NA	NA
WP_003600902.1\|2594451_2596077_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003600901.1\|2596320_2598702_-	phosphoketolase family protein	NA	NA	NA	NA
WP_003597152.1\|2598961_2599108_+	hypothetical protein	NA	NA	NA	NA
WP_003597148.1\|2601077_2601677_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_096836507.1\|2601673_2602836_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	9.6e-29	32.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage