CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	1 crisprs	csa3,cas14j	1	1	6	1
NZ_CP017463	Staphylococcus pasteuri strain JS7 chromosome, complete genome	2 crisprs	WYL,csa3,DEDDh,cas3,DinG	0	1	7	0
NZ_CP017465	Staphylococcus pasteuri strain JS7 plasmid pSNJS702, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017464_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017464_1

83111-83312

TypeV

Consensus_repeat	Method
TAAAAGGCATAGTTTTGCCACATTAAAGGCATAATTTTTTTGTTGTTATGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017464_1

>merge|NZ_CP017464|1|83111-83312|CRISPRCasFinder
TAAAAGGAGTAGTTTTGCCACATTAAAGGCATAGTTTTGCCACATAAAAGGCATAGTTTTGCCACATTAAAGGCATAATTTTTTTGTTGTTATGCCTATAGTTCTATGTTACTGTATAAACAAGCTTTAATACATAATATTATAGAATTTAAAAGGCATAGTTTTGCCACATTAAAGGCATAATTTTTTTGTTGTCATGCCT

>NZ_CP017464|1|1|83111-83312|CRISPRCasFinder
TAAAAGGAGTAGTTTTGCCACATTAAAGGCATAGTTTTGCCACATAAAAGGCA	TAGTTTTGCCACATTAAAGGCATAATTTTTTTGTTGTTATGCCTATAGTTCTATGTTACTGTATAAACAAGCTTTAATACATAATATTATAGAATT
TAAAAGGCATAGTTTTGCCACATTAAAGGCATAATTTTTTTGTTGTCATGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017464.1\|WP_029056327.1\|79690_79939_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_017636246.1\|74808_75249_-\|RusA-family-crossover-junction-endodeoxyribonuclease	unknown	unknown	gnl\|CDD\|377564
NZ_CP017464.1\|WP_141768807.1\|89418_89655_+\|plasmid-mobilization-relaxosome-protein-MobC	unknown	unknown	gnl\|CDD\|368576
NZ_CP017464.1\|WP_157772508.1\|81444_81813_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_141768806.1\|78048_78249_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_046466355.1\|90649_91126_+\|DUF334-domain-containing-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_046466363.1\|78675_79014_-\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl\|CDD\|226180
NZ_CP017464.1\|WP_050267355.1\|91921_92785_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|227814
NZ_CP017464.1\|WP_072291913.1\|82482_82875_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369151
NZ_CP017464.1\|WP_046466362.1\|79059_79305_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|274230
NZ_CP017464.1\|WP_017636236.1\|83334_84198_+\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|227814
NZ_CP017464.1\|WP_046466365.1\|75255_75633_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_050267289.1\|85003_85927_-\|aspartate-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234849
NZ_CP017464.1\|WP_046466361.1\|80025_80832_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP017464.1\|WP_046466356.1\|87740_89120_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017464.1\|WP_046466358.1\|85919_86810_-\|molybdopterin-biosynthesis-protein-MoeB	unknown	unknown	gnl\|CDD\|181302
NZ_CP017464.1\|WP_046466364.1\|76484_76844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_046466357.1\|86948_87629_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238042
NZ_CP017464.1\|WP_002489809.1\|89639_89828_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017464.1\|WP_072291914.1\|84382_84523_-\|putative-holin-like-toxin	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017464.1\|WP_017636246.1\|74808_75249_-\|RusA-family-crossover-junction-endodeoxyribonuclease	gnl\|CDD\|377564	pfam05866, RusA, Endodeoxyribonuclease RusA. This family consists of several bacterial and phage Holliday junction resolvase (RusA) like proteins. The RusA protein of Escherichia coli is an endonuclease that can resolve Holliday intermediates and correct the defects in genetic recombination and DNA repair associated with inactivation of RuvAB or RuvC.	2.62906e-16
NZ_CP017464.1\|WP_050267355.1\|91921_92785_+\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|227814	COG5527, COG5527, Protein involved in initiation of plasmid replication [DNA replication, recombination, and repair].	4.02065e-85
NZ_CP017464.1\|WP_046466363.1\|78675_79014_-\|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl\|CDD\|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	5.87512e-07
NZ_CP017464.1\|WP_072291913.1\|82482_82875_-\|hypothetical-protein	gnl\|CDD\|369151	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus. This of family of predicted proteins represents the N-terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids. Most proteins in this family are bacterial, but archaeal and eukaryotic members are also included.	1.40939e-06
NZ_CP017464.1\|WP_046466357.1\|86948_87629_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.74716e-12
NZ_CP017464.1\|WP_017636236.1\|83334_84198_+\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|227814	COG5527, COG5527, Protein involved in initiation of plasmid replication [DNA replication, recombination, and repair].	6.96145e-85
NZ_CP017464.1\|WP_046466362.1\|79059_79305_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|274230	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote. Members of this protein family are putative addiction module antidote proteins that appear recurringly in two-gene operons with members of the Doc (death-on-curing) family TIGR01550. Members of this family contain a SpoVT/AbrB-like domain (pfam04014). Note that the gene pairs with a member of this family tend to be found on bacterial chromosomes, not on plasmids. [Mobile and extrachromosomal element functions, Other].	1.21962e-10
NZ_CP017464.1\|WP_050267289.1\|85003_85927_-\|aspartate-carbamoyltransferase	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	5.09894e-71
NZ_CP017464.1\|WP_046466361.1\|80025_80832_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	9.05759e-32
NZ_CP017464.1\|WP_046466356.1\|87740_89120_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	8.89539e-48
NZ_CP017464.1\|WP_046466358.1\|85919_86810_-\|molybdopterin-biosynthesis-protein-MoeB	gnl\|CDD\|181302	PRK08223, PRK08223, hypothetical protein; Validated.	7.29771e-41
NZ_CP017464.1\|WP_141768807.1\|89418_89655_+\|plasmid-mobilization-relaxosome-protein-MobC	gnl\|CDD\|368576	pfam05713, MobC, Bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis-active site of a mobilising plasmid, the origin of transfer (oriT) region. The absence of MobC has several different effects on oriT DNA. Site- and strand-specific nicking by MobA protein is severely reduced, accounting for the lower frequency of mobilisation. The localized DNA strand separation required for this nicking is less affected, but becomes more sensitive to the level of active DNA gyrase in the cell. In addition, strand separation is not efficiently extended through the region containing the nick site. These effects suggest a model in which MobC acts as a molecular wedge for the relaxosome-induced melting of oriT DNA. The effect of MobC on strand separation may be partially complemented by the helical distortion induced by supercoiling. However, MobC extends the melted region through the nick site, thus providing the single-stranded substrate required for cleavage by MobA.	2.12049e-05

>NZ_CP017464.1|WP_072291913.1|82482_82875_-|hypothetical-protein
MLVNLCKLQILYNFLLFDPQYKRLHVKSKAMYTLIIDTMMYRMNKGTIEIDKNGHQYIEFETEYFKKLLNISVNAVNKFKKELIKVGLIDVLQKQENNVFTSTCQKSKTKNFIIIIKRQNPTNTHIYRIT
>NZ_CP017464.1|WP_157772508.1|81444_81813_-|hypothetical-protein
MICGAKNKYNQLYETNYRLEDLENEIGEALIRVNRKHKKDNKKMTEVCNYLVASIKGAFTQRHEEDYNKGVIAKSPKIDLFGDLPNIITPSSQLMNSNIRKQITSNKLHAANQYATAKKMPF
>NZ_CP017464.1|WP_046466361.1|80025_80832_-|ParA-family-protein
MEIITFAAVKGGVGKTTLSYNFSGYLSDLGYKVLMIDLDHQCNLSQILGIYDQKNTVLSIFEKIDTLHIEEKVKIHRINDNIDLISGFLRLDEYEKHMSTTDGKDMQLYMWLDDYYEEYNIGQYDYIIIDTHPDFSTSTRNAIVVSHKVISPNKPSGFSDDSNANISYRINKLKKDLIDFRTRESYVTAKLFFVGNMVKHNTKSSINFKKSIENQEDYITYFPDKELITRSVLEKKPIVSFKQEPAIYLKEKSFFQQFIKSCKAIKDA
>NZ_CP017464.1|WP_029056327.1|79690_79939_-|hypothetical-protein
MAFNKKIDSNDQENSIEKALENAVSPNTSYKKIEIKKDKIKEKKKRYQFMLQPSVRKKLDDLVEENNYSSSSEFLNEIIKQL
>NZ_CP017464.1|WP_046466362.1|79059_79305_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MTVIHTRKLRKSGNSNILTIPKEVIKALDVVEGQFIAFNVVNGRVVLEAVKTTDDNERDILSISNQISKQYDSAFKDLVNR
>NZ_CP017464.1|WP_046466363.1|78675_79014_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MNVYVISKYSPKEKHGVKGPNALNMLVNILKQYVFGKEIYSTLELKSVSLVRNWVQKHILFNGNKRKTLISLGAFLNINGYQLTIINTEATDCKIKIATDDLEEEIINKWVS
>NZ_CP017464.1|WP_141768806.1|78048_78249_-|hypothetical-protein
MLYEEDIDLIVGVMDTTRKTLFNLNTELLLPIVRMVAILAIVIFFIVFLSIWLSHTSKYMRKYIND
>NZ_CP017464.1|WP_046466364.1|76484_76844_-|hypothetical-protein
MREQLKKFKNQDVVLTAKVKTVKYRRYVDRFSKYKKNVHILLKNAKINGEVIDHVWLQERNKFYEEYKPLTGQTVKFKVKIKPYIKKKDFVYIEDYGIQRLSKIMSKEVYDEQKPFKKK
>NZ_CP017464.1|WP_046466365.1|75255_75633_-|hypothetical-protein
MANTKTIKQIKMAKMKSENLNEFLLNFVHWEKIAKRLNYSKPSVFRIKKQLREHIDEEGEQEALYRMFTVSELNKLIDLYNDYIKHPEAYAKPKTKKELNIERQEKAIAKHMNDMKMDYKPTDRE
>NZ_CP017464.1|WP_017636246.1|74808_75249_-|RusA-family-crossover-junction-endodeoxyribonuclease
MAKEWSYIIDIPPVATPRPNFRSVKGADGKVKNITYYPEKYNQYMRDVQEMLKRDNALNKDFYDVMACPYGVKAEIKFFVQAPKGYKGVNNIMRTTAPDIDNLEKAAFDSIFKGLEIKDSRIAMVAKAKFQELHRPRTEITLKGIE
>NZ_CP017464.1|WP_017636236.1|83334_84198_+|RepB-family-plasmid-replication-initiator-protein
MSGETVIYKNEMNLVPLRRFTATEINLFFAMCNKLKEQDTNTLHLSFDELKELSNYSPETRNINRFVDDLQRVYDKMLDIRYTIRTETKIKKFVLFYKYEIDISEKYLEIATSPDLKYILNSITNNFTKFELKEMTHLKSTYSKNMFRLLKQYKHTGYMKIKIEDFRERLDIPESYRMSNINQFVLTPIIKELSPIFNNLNINKIKAKKGRKIEWLEFTFDSEKRIHSKRQPQMADIGKSRQYISREKTPKWLKERTYEKQTQNEYDPQLEKEREAFLKQLEVDWEE
>NZ_CP017464.1|WP_072291914.1|84382_84523_-|putative-holin-like-toxin
MPMMVSIKSLERRRLLVGISTMLQFGIFLIAFIGLIIELIKLSQKK
>NZ_CP017464.1|WP_050267289.1|85003_85927_-|aspartate-carbamoyltransferase
MINNLLSMKNVNLTDINTIFEKADYYEKALKNGKVIKDLEGKILATLFYQPSTRTRMSFTSAMYRLGGQVIDMGGPKVARTDDYFDESMSDTIKYIEQYSDIMVMRHFQNYTVEKASKITHIPMINAGDGTNEHPTQALLDLYTMTKELNGLEDKVIGIGGDINCRVIRSIVIGLEKFDIKKIIFLLPNGEELNSDILNLLKNTDYSIVHNVERVLKQADILDIIPFELPDFNSAYSEKVDEKPSLENNLIVSKEKFNDKNRIPILSPGPREAELSSDTDDMDNVIFTKQAYNGLLIRMSLLYYFLH
>NZ_CP017464.1|WP_046466358.1|85919_86810_-|molybdopterin-biosynthesis-protein-MoeB
MNSKVIKYTADFDEKRYWERVKRNLGWLGNTDEEAEKRQNKISEVVIGIAGCGGIGGAVAERLVRLGVRHIKVADPDYFELSNINRQFGASLDNLGRNKAEVVGESIFNISRDVNVDVYPEGINNNTADDFVEGCDYVLDKIELFELEARYALHRAFQKNERCKFMLTVPVFGHRAFFFKWTKDSMSAEDYFDIKPGSELDEKNTRKIVYSLFPEYPQFPSKERLDDWLINNKECPIFAGCPPLAQGLLVERLSFEITGLKDTPEYKELPSTPSYSMFDSASWETKIVEREENKID
>NZ_CP017464.1|WP_046466357.1|86948_87629_-|winged-helix-turn-helix-transcriptional-regulator
MYENFSDNILLIGHKTRLTMLIELSSGIALPAGELAKLAGIKPQTASEHLSKLVEANFISVNTWGRHRYYKIDNDKVIDAINALSVISPPMNSKSLKETTKKEKLSYIRTCYGHIAGKIGVKFTEALLENDYLKEKEECYKLTQNGKNWLKKIGMETEKSMYSKSIPKHIDWTERKNHMAGPVALQITEKMIELSWIENSEINRCLNLTKKGKSAFKTYLNMNIPQ
>NZ_CP017464.1|WP_046466356.1|87740_89120_+|MFS-transporter
MNSSKYFDHLVVFTAGIGMFLSTLDSGIINVALPTLSKSFNVDTSFITWSVTLYTLLLTGTIIIFGRLSDKYSRLNIYSLGLTIFLIASILCGFSNNVIQLIVFRGLQGIGAAMLQGTATAIITTTIPENRQGSALGTLSILLGIGPVLGPSIGGLLISVGNWRWIFWINIPFIFISLIGCLFLKRYIKEQKSTSIHLDIRGNSLLFLSIFCLLISLTSWSYHSIFNISVYGNFLIFIVSFCLFIIWELKTNHPIIDLRLFKNVSFSSPIFAIFVFGGTTSLGFIIPPYILEKINHLSSWQIGLVNLASPLGLVLISKISGKLISRIGNIVLMTTGLIIMIVAYTSLGLLQYILNPVTISLLLLIYGIGGGFFLPSNTSAIMGTVSQDMQGTVGATQRMVQNIGIAFYTAVTSLFISNSSNSDKLIEGSSHAWLFASITLFLALLPFLLKILKTKYEPN
>NZ_CP017464.1|WP_141768807.1|89418_89655_+|plasmid-mobilization-relaxosome-protein-MobC
MSVPSFVKKKAQGSRLVAPKFDKETRQSIAKDLSKLGANTNQIAKYCNQHQYDAPNYEALEHNINELRERLNDIWERI
>NZ_CP017464.1|WP_002489809.1|89639_89828_+|hypothetical-protein
MGKNLEIVTSLFVLILAIGFSIWNFYNHSYTTAIIMLVIGVINIGYLIQEIIEKRRDDDGNN
>NZ_CP017464.1|WP_046466355.1|90649_91126_+|DUF334-domain-containing-protein
MSAVRHYVQRIDTDNLKQDFEQAIQKELNDVKTETQNMVKDMKSNQADLQKANSEYKKTIDERIKNNETAVKQYDQAFNRLTRGITAMFFIFALTMVAFLVSNPLDDLLGVHHFYEWINYVLKTGHSAWRYFILLLYLVPYLLFGLLIYTILRAYKSI
>NZ_CP017464.1|WP_050267355.1|91921_92785_+|RepB-family-plasmid-replication-initiator-protein
MSGETVVYKNDLNLVPLRKFTSIEINLFFAMCNKLKEQDTYTLHLPFDELKELSNYNPKTRNINRFVKDLDDVYKKMLELTIKYEDDEIIERFVLFNHYRIHKKEQYLEISTSPNLKHILNSITNNFTKFELEEMTTLKSTYSKNMFRILKQFKHTGYLKIKINDFRERLDIPISYRMTDINKNVLKPIINELSYIFKALKIHKVRAKKGRKIEYLEFIFEPENRIYNKKYSESKNTVSSRRYISREKTPQWLEDRTYTKKVRSDIDPQFEKEREAFLKHLQIDWDE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP017464_1	1.1\|83164\|96\|NZ_CP017464\|CRISPRCasFinder	83164-83259	96	NZ_CP017464.1	63756-63851	36	0.625

1. spacer 1.1|83164|96|NZ_CP017464|CRISPRCasFinder matches to position: 63756-63851, mismatch: 36, identity: 0.625

tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	CRISPR spacer
tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017464_1	1.1\|83164\|96\|NZ_CP017464\|CRISPRCasFinder	83164-83259	96	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	83164-83259	36	0.625
NZ_CP017464_1	1.1\|83164\|96\|NZ_CP017464\|CRISPRCasFinder	83164-83259	96	NZ_CP017464	Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence	63756-63851	36	0.625

1. spacer 1.1|83164|96|NZ_CP017464|CRISPRCasFinder matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 36, identity: 0.625

tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	CRISPR spacer
tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	Protospacer
************************************************************

2. spacer 1.1|83164|96|NZ_CP017464|CRISPRCasFinder matches to NZ_CP017464 (Staphylococcus pasteuri strain JS7 plasmid pSNJS701, complete sequence) position: , mismatch: 36, identity: 0.625

tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	CRISPR spacer
tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	Protospacer
************************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 19562

Staphylococcus_phage(27.27%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046467562.1\|887_2288_+	SLC45 family MFS transporter	NA	NA	NA	NA
WP_156156336.1\|5133_5274_-	hypothetical protein	NA	NA	NA	NA
WP_072291879.1\|6992_8147_+	glutathione-dependent formaldehyde dehydrogenase	E3SJ82	Synechococcus_phage	8.1e-12	21.8
WP_046467565.1\|8231_8570_-	transcriptional regulator	NA	NA	NA	NA
WP_096807889.1\|8774_10787_-	ATP-binding cassette domain-containing protein	A0A1B1IVR3	uncultured_Mediterranean_phage	2.4e-107	36.3
WP_072291880.1\|11131_11530_-	glucose-6-phosphate dehydrogenase	NA	NA	NA	NA
WP_082082910.1\|11481_11724_-	glucose-6-phosphate dehydrogenase	NA	NA	NA	NA
WP_082082911.1\|11720_12410_-	hypothetical protein	M4SIY3	Cyanophage	4.6e-39	41.2
WP_046467567.1\|12370_12775_-	hypothetical protein	Q6NE04	Leptospira_phage	8.0e-15	41.7
WP_046467568.1\|12834_13230_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	1.7e-62	87.0
WP_046467569.1\|13247_14537_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	5.6e-187	81.6
WP_046467570.1\|14536_14851_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4PQT4	Staphylococcus_phage	6.1e-39	73.1
WP_046467571.1\|14911_15511_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.0e-13	29.7
WP_046467572.1\|15641_16220_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	3.2e-41	51.7
WP_046467573.1\|16680_17001_-	thioredoxin family protein	NA	NA	NA	NA
WP_011152946.1\|17062_17377_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	2.4e-14	41.8
WP_081048863.1\|17740_18310_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_058714291.1\|18608_19562_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.2e-80	47.9

DBSCAN-SWA_2

23196 : 23874

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046467501.1\|23196_23874_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.4e-27	33.3

DBSCAN-SWA_3

36154 : 36502

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002452612.1\|36154_36502_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	2.4e-12	34.9

DBSCAN-SWA_4

57894 : 67955

Staphylococcus_phage(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466356.1\|57894_59274_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	5.9e-17	30.3
WP_046466357.1\|59385_60066_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046466358.1\|60204_61095_+	molybdopterin biosynthesis protein MoeB	NA	NA	NA	NA
WP_050267289.1\|61087_62011_+	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	3.0e-33	34.6
WP_072291914.1\|62491_62632_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	1.1e-08	69.6
WP_017636236.1\|62816_63680_-	RepB family plasmid replication initiator protein	A0A0N7GFI2	Staphylococcus_phage	4.2e-05	65.1
WP_072291913.1\|64139_64532_+	hypothetical protein	NA	NA	NA	NA
WP_157772508.1\|65201_65570_+	hypothetical protein	NA	NA	NA	NA
WP_046466361.1\|66182_66989_+	ParA family protein	J9QE36	Clostridium_phage	1.3e-13	26.9
WP_029056327.1\|67075_67324_+	hypothetical protein	NA	NA	NA	NA
WP_046466362.1\|67709_67955_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0N9RRQ9	Staphylococcus_phage	1.2e-05	34.6

DBSCAN-SWA_5

79059 : 89120

Staphylococcus_phage(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466362.1\|79059_79305_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0N9RRQ9	Staphylococcus_phage	1.2e-05	34.6
WP_029056327.1\|79690_79939_-	hypothetical protein	NA	NA	NA	NA
WP_046466361.1\|80025_80832_-	ParA family protein	J9QE36	Clostridium_phage	1.3e-13	26.9
WP_157772508.1\|81444_81813_-	hypothetical protein	NA	NA	NA	NA
WP_072291913.1\|82482_82875_-	hypothetical protein	NA	NA	NA	NA
WP_017636236.1\|83334_84198_+	RepB family plasmid replication initiator protein	A0A0N7GFI2	Staphylococcus_phage	4.2e-05	65.1
WP_072291914.1\|84382_84523_-\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	1.1e-08	69.6
WP_050267289.1\|85003_85927_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	3.0e-33	34.6
WP_046466358.1\|85919_86810_-	molybdopterin biosynthesis protein MoeB	NA	NA	NA	NA
WP_046466357.1\|86948_87629_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046466356.1\|87740_89120_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	5.9e-17	30.3

DBSCAN-SWA_6

94998 : 100478

uncultured_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096807890.1\|94998_97020_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	5.7e-69	30.2
WP_046467547.1\|97692_98124_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_046467548.1\|98816_99959_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	C1KFJ5	Lactobacillus_virus	6.9e-96	50.7
WP_046467549.1\|100055_100478_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	7.5e-48	64.3

Anti-CRISPR protein detection

Acr_ID: NZ_CP017464.1|WP_029056327.1|67075_67324_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP017464.1|WP_029056327.1|67075_67324_+|hypothetical-protein

67075_67324_+

82 aa aa

57894-67955

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP017464_1	TypeV	1.1\|83164\|96\|NZ_CP017464\|CRISPRCasFinder	83164-83259	96	63851-63756	36

1. spacer 1.1|83164|96|NZ_CP017464|CRISPRCasFinder matches to NZ_CP017464 position: 63851-63756, mismatch: 36

tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	CRISPR spacer
tagttttgccacattaaaggcataatttttttgttgttatgcctatagttctatgttact	Protospacer
************************************************************

2. NZ_CP017463

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017463_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017463_1

566441-566528

Orphan

Consensus_repeat	Method
ACGAATGAAATGAGTTAGAGCCACTTATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017463_1

>merge|NZ_CP017463|1|566441-566528|CRISPRCasFinder
ACGAATGAAATGAGTTAGAGCCACTTATGCATTAGCGAAGCTAAGGCGAACCGAAAAGAACGAATGAAATGAGTTAGAGCCACTTATG

>NZ_CP017463|1|1|566441-566528|CRISPRCasFinder
ACGAATGAAATGAGTTAGAGCCACTTATG	CATTAGCGAAGCTAAGGCGAACCGAAAAGA
ACGAATGAAATGAGTTAGAGCCACTTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017463.1\|WP_046467096.1\|561749_562952_+\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP017463.1\|WP_017636496.1\|574250_575036_+\|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl\|CDD\|372574
NZ_CP017463.1\|WP_017636500.1\|570671_571721_+\|type-2-isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235465
NZ_CP017463.1\|WP_017636498.1\|573377_573701_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP017463.1\|WP_046467097.1\|563010_563562_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017463.1\|WP_046467092.1\|556551_557610_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_CP017463.1\|WP_046467093.1\|557609_558275_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP017463.1\|WP_017636497.1\|573693_574254_+\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|285278
NZ_CP017463.1\|WP_046467101.1\|568679_569078_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017463.1\|WP_017636501.1\|569677_570625_+\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213365
NZ_CP017463.1\|WP_096807738.1\|563680_564328_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP017463.1\|WP_017636504.1\|567718_568618_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP017463.1\|WP_046467100.1\|566850_567489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017463.1\|WP_046467102.1\|569077_569560_-\|thioesterase	unknown	unknown	gnl\|CDD\|372545
NZ_CP017463.1\|WP_096807739.1\|564340_566329_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP017463.1\|WP_046467095.1\|560181_561594_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226987
NZ_CP017463.1\|WP_017636499.1\|571839_573048_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|308938
NZ_CP017463.1\|WP_046467094.1\|558326_559289_-\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP017463.1\|WP_046467091.1\|555740_556415_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP017463.1\|WP_046467090.1\|554380_555748_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
NZ_CP017463.1\|WP_046467096.1\|561749_562952_+\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.83296e-88
NZ_CP017463.1\|WP_017636496.1\|574250_575036_+\|DUF4097-family-beta-strand-repeat-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	2.10382e-17
NZ_CP017463.1\|WP_017636500.1\|570671_571721_+\|type-2-isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235465	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional.	0
NZ_CP017463.1\|WP_046467097.1\|563010_563562_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.26522e-12
NZ_CP017463.1\|WP_046467092.1\|556551_557610_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.35647e-14
NZ_CP017463.1\|WP_017636504.1\|567718_568618_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	6.19945e-46
NZ_CP017463.1\|WP_017636497.1\|573693_574254_+\|DUF1700-domain-containing-protein	gnl\|CDD\|285278	pfam08006, DUF1700, Protein of unknown function (DUF1700). This family contains many hypothetical bacterial proteins and putative membrane proteins.	7.37171e-55
NZ_CP017463.1\|WP_017636501.1\|569677_570625_+\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213365	cd12831, TmCorA-like_u2, Uncharacterized bacterial subfamily of the Thermotoga maritima CorA-like family. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the TmCorA-like family are found in all three kingdoms of life. It is a functionally diverse family which includes the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, and three Saccharomyces cerevisiae proteins: two located in the plasma membrane: the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	6.70844e-140
NZ_CP017463.1\|WP_096807738.1\|563680_564328_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	1.20467e-40
NZ_CP017463.1\|WP_046467093.1\|557609_558275_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.67329e-84
NZ_CP017463.1\|WP_017636499.1\|571839_573048_-\|sodium/glutamate-symporter	gnl\|CDD\|308938	pfam03616, Glt_symporter, Sodium/glutamate symporter.	1.42865e-154
NZ_CP017463.1\|WP_017636498.1\|573377_573701_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.12484e-23
NZ_CP017463.1\|WP_046467102.1\|569077_569560_-\|thioesterase	gnl\|CDD\|372545	pfam13279, 4HBT_2, Thioesterase-like superfamily. This family contains a wide variety of enzymes, principally thioesterases. These enzymes are part of the Hotdog fold superfamily.	8.69705e-30
NZ_CP017463.1\|WP_096807739.1\|564340_566329_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.68077e-138
NZ_CP017463.1\|WP_046467095.1\|560181_561594_+\|membrane-protein	gnl\|CDD\|226987	COG4640, COG4640, Predicted membrane protein [Function unknown].	3.2579e-92
NZ_CP017463.1\|WP_046467094.1\|558326_559289_-\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	3.319e-42
NZ_CP017463.1\|WP_046467091.1\|555740_556415_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.13347e-73
NZ_CP017463.1\|WP_046467090.1\|554380_555748_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.40191e-46

>NZ_CP017463.1|WP_096807739.1|564340_566329_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MTATFIIVYIIIALILLGLINFFISKSKKKSKNQKVEQRSTKGSESQSYQSKFKASDLDKQSESRTTSPNDYSSTSNHVEDDKRKHHFESINESEDDNKNVHEQDRLRRSEDSSRKHTDREETENVNDEVHNPINPDSEEGRVNEKIKKQHSDFIFGKGITRGKILAAMLFGMFIAILNQTLLNVALPKINTEFNISASTGQWLMTGFMLVNGILIPISAFLFNKYSYRKLFLIGLVLFTIGSLICAISMNFPIMMVGRVLQAIGAGILMPLGSNVIVTIFPPEKRGMAMGIMGVAMILAPAIGPTLSGYIVQNYHWNIMFYGMFFIGLIAIIVGYFWFRLYQRTTNPKADVPGIIYSTIGFGALLYGFSEAGNKGWGSTEIVTMFVIGVIFIILFVIRELRMKAPMLNLTVLKYPTYTLTTVINMIVMMSLYGGMILLPIYLQNLRGFSALDSGLLMLPGALVMGVLGPVAGKLLDTIGIKPLAIFGIAIMSYATWELTKLNMDTPYFSIMGIYVLRSFGMAFIMMPIMTAGLNALPGRLISHGNAFVNTMRQLAGSIGTAILVTVMTTQTTNHVAAFGTELDKTNPIVQDHMRELAQQYGGEQGAMKVVLQFINKLASVEGINDAFVIATMLSILALILSFFLQSKKKADASAAKSRAED
>NZ_CP017463.1|WP_096807738.1|563680_564328_+|HlyD-family-secretion-protein
MKKMVLINIITIIVLIVIGVLGFYFWNNATSYVSTDNAKVDGDQMKIASPTAGEIKSFDAKQGEKLKKGDKVAEVVGQGQDGQSKKMSIKMPKDGTIVKTDGMEGSMAQAGNPIAYAYNLDDLYVTANVDEKDVADIEKGNDVDIDIDGQKATVSGKVEQIGDATANSFSLMPSSNSDGNYTKVSQVVPVKISLDSEPSKNVVPGMNAEVKIHKN
>NZ_CP017463.1|WP_046467097.1|563010_563562_-|TetR/AcrR-family-transcriptional-regulator
MKRKAKFKIIQSMINLLDEYPFEDITIKMICAYSGVNRSTFYDNYKDKYDLLEKIQNYHLSKYTKLLTALYNNFESVRVDTSKLYKFFLIVAKYIKRKEAFYRAVFITYPNKGLALEYFQATKETYEHVINDYPNSIRNKSLFITYSIGGEIGVIFYWLRNGCQESPEEIAENLLANTVKLQR
>NZ_CP017463.1|WP_046467096.1|561749_562952_+|multidrug-effflux-MFS-transporter
MNSKERAKSQSLIFVIILGALTAIGALSIDMFLPGLPDIQNDFHTTTSNAQLTLSLFMIGLALGNLFAGPISDSIGRRKPLWISMLIYTIASLGIVFVTNIQVMIALRFIQGLTGGAASVISRAIASDMYKGKELTKFLSLLMLVNGVAPVIAPAIGGVILSFAVWRMVFIILTVFGVLMVIGTLTKVPESLQEDEKDSNGIREMFKNFKHLLFTPKFVLPMAIQGFSFIMLFTYISASPFIVQKIYHMSALQFSIMFAGIGITLIISSQLVGFLVDYVDRQRLLKIVTFIQIFGVVLVIFTLLNHMSFWILVIGFIILVSPVTAVASLGFSIAMDESTRGRGSASSLLGLVQFLLGGVMSSLVNVMGEHNVIPYVTIISSTAVILIILQLLNSKIHRYN
>NZ_CP017463.1|WP_046467095.1|560181_561594_+|membrane-protein
MKQCPQCGVSVGNDEHTCHNCGQSLKKEINQKSSKNNNIKRKDRTNKSTAQSSNIKLRKIVPVAIIFFIIILLVILFFLLKNYNSPNAQAKILVNAIDNDDNQKVATLLGTKDKKVDPDEAAAYIKYIKKEVGMKHFVKDVRNTVDKLNKSDSSVASYIQTKDGQDILRVSKNGRRYFIFDNMSFNAPTKQPIVKPKVDTKYEFKSGGKRKTVIADANKTTPLGYFIPGNYHIDATKETKNGVFTGTLDFNFKNSNSETVDVNENFEEAHLNIKLKGATKLTSKSKKVIINDRTMSYSNSKEFGPYPKNKDITISAQGKAKGKTFESETKTIKASNLKDNTSVTLDFDSDEISKYVTKKEKEENSLKNKLTQFFSGYSMALTSAKNQSNFDLISSYFKKNSSMYDKMKNSISNQQLVSLQSPQVLSASKSGDKILTTVQHIDENGQYVNKEYELEQASSGNDFNLIKETD
>NZ_CP017463.1|WP_046467094.1|558326_559289_-|YdcF-family-protein
MISLLFALLILIILISLFFNQFITLSITGFISTIILGFITLIYHLISYSIPYELIAIMIMIFMYIILKHVSIFRNKQGRRFIKQMTLSVVRLILFIIACFYISTCPILILNGITLWLSFIGLSTLFAFFCYVFWSSAYGSTHFQKPIDLIIILGAGIFTEEVTPMLKERLDRAYDIYRQFVNSPMILVSGGQGPDEPITEALAMQRYLIHRGVPKEHILLEQQSTNTNTNFIYSKEIIRKHFNIEPKILCVTSQFHILRALKLAKNHDIHAYGIGSHTPYHFFHIALIRDFLGVMYQYRLLLTVYFALSFWLSIIILWLK
>NZ_CP017463.1|WP_046467093.1|557609_558275_+|ABC-transporter-ATP-binding-protein
MTLQVKHLVKTFGEGSTKTEVLKGIDLTIEPGEFVILSGASGSGKSTLLSILGGLLSSTDGDINYGQQPLFSTSKQNSERRLSEIGFIFQSSHLVPYLSVIDQLVIVGREAGMSKKFAYHRAEKLLSDIGLYERMNAYPHMLSGGEKQRVAIMRALMNNPKVLLADEPTASLDAKRALSVVKMIKNEISNNQMCGIMVTHDQRLFEYADKVIYLEDGLIKN
>NZ_CP017463.1|WP_046467092.1|556551_557610_+|FtsX-like-permease-family-protein
MKLAWNEIKFYKLRYILIMLIIVLLSMMVLFISGLAQGLGRENVSLFSQLKSEHYIIQDMKAPQIEKSQLTKKQQSKVENVINTKPLKMKQQTLNVKGENNEDVLAIDSSLQHKFKLAKGHYPKNYNQIVVNEKLTGKGISIGDKVQFKNQEKAYKVTGFLKDAMYSHSSIVMMNQQGFSNIKGQYATFYPINKLSKHEQQQLKGITGIQVTDENELKDNIASYKAEQAPLTMMIVSLFVISAIVLSAFFYVMTIQKVSEIGILKAIGIKTRHLLKSLTSQILMITLLSVLISVAMIISVSFIIPVTMPFHLAYANYILVIIIFILVACIGSLLSFIKVVKIDPLDAIGGGE
>NZ_CP017463.1|WP_046467091.1|555740_556415_-|response-regulator-transcription-factor
MNHCLIVDDDLKILNYVSTHLEKEHFQTYTHMNAKDALECLNHNQIDIAIVDIMMEGMDGFELCQIIKEDFELPVIMLTARDALSDKERAFLSGTDDYLTKPFEVKELIFRIKAVLRRYDIHAEEQLVIGDLTLQQAYMEVIVNDKTMMLPNKEFQLLFLLATNKKQILTREHLIEKIWGFDYEGDERTVDVHIKRLRQRLAQLHSNVTIKTVRGQGYKVEVNV
>NZ_CP017463.1|WP_046467090.1|554380_555748_-|HAMP-domain-containing-histidine-kinase
MFKSLYIRIAVYTIVVILFSAFISFIFTNIYYHFNLKPSNDAKIMKTLKGAKEFEDKQSFEHINTYFKHLGDMNYQIMTVDQHGNKHFYGAPFRKDSLPKHDIQKVLHGDTYHGIKEKPFKLFVTGFFDNETDNTVGLQFKNNHQAIAVFMRPDIGETFSEFRIFLAVLLALLLIISISLVIASTYSIVRPVKQLKRGTERLMNGDFNTPIKQTRKDEIGTLQYRFDTMRQSLKQVDEMRQHFVQNVSHEIKTPLTHIKQLLVDLEQTDNENKRQNKIEEINQITTQLSDLTRELLLLSELDNAQHLTFSDNIQLNILIKDIIRHEHFALDNKSLMIMSNLESIYFLGNERLLHQAINNLIINAIKYAYHDSVINIALTQTSQHILIQVTNHGDVITETQQSRMFERFYKLSHDNNSNGLGLAITESIIKLHHGKIYVSSTQQEGTTFTIQLPQN
>NZ_CP017463.1|WP_046467100.1|566850_567489_-|hypothetical-protein
MSNQQSRLENFDDAFQTQGLHRGKQYGKKKRSWVSMIIQLIVLVLTAITGYSMYKQPIFNIVFAKQTINFHQLKNFQDTVTQIGNININLGNIDQLQQSIDRLLIVFYAFFVLCILSLILSILTIIFNRSALKVVNMLFLAIMLVITMYFSYIIHTLAEKISDSLKQYYLTVSPDQVVVEADAIHNALILLACSIGLLIISLFFRNRKIRIK
>NZ_CP017463.1|WP_017636504.1|567718_568618_+|alpha/beta-hydrolase
MKNRLMNRVVNKYILHNRSIFFDNDEAVDKFFEKRQIENEKKHKQPSTLNVKANLDKLMLGDMQVFRFNFRHESKRKILYIHGGYNTLQPSPFHWRFLDKLTLSTLHEVVFPIYPKAPDYHINDTQKAVKDVYDQLVSEVGAEHIIVMGDGSGGGLALNLVQSLIEQNEQVPRQLYLISPLLDATLSNKDITDDLLDKDILVSRFGVNEIMKRWADELPLTNSRVSPIYGKIEGLPPVFMFGGGREIINPDMHLFKDTLESVGQDIEFYEYPRMVHDFPLYPIRESHKVVKQITKALNK
>NZ_CP017463.1|WP_046467101.1|568679_569078_-|hypothetical-protein
MNDSIRYTVQSELLDLFDDVKYALSDLNEQKALTINGPGSKLFKRATRMSYTQGQKQAIDEINQLLEKYDDDNQFLEHYNQLANRVRNDNIEKVFSFSNLTDIPSHFEDTIADLYFSKGQNFIIKHINSIME
>NZ_CP017463.1|WP_046467102.1|569077_569560_-|thioesterase
MSQTFKVSKTVTEDFIDHNNHMHDAYYNIIFSDVIDDFNYSHGLSLEEREQYKYTTFTIEEHTTFLSELTLNEHYDVELYIYDYDYKRVHFFLRMVRNDGNFAATNEVMMMGIDQKQRRSAAFPEDYYKQMQHYADQQQQTIEWPDQLGHRIGIPHKEDK
>NZ_CP017463.1|WP_017636501.1|569677_570625_+|magnesium/cobalt-transporter-CorA
MTMTIRYQTSTEPLKRVNRIEDIPSEATIVWYDFEDATPQENEFLRNHFNFNDLEIDDAINGIPRAKYKSYDDYQYLVLHSILVRNYSAIALNVFLGDKLLVTYHHQSFESLKRVAKVNEQHHDPELDCADIVILILDSMVDKYFNFVYDIEDKVYTFEDRHVDDRFSKDVMDNVFKLRSDLIKIKRVLFPMQELVDTIKTEGNLIKDNKHSMYIQHIDDHLIKQSNVIKTSQEMTNEIRENYESYTSFRMNNIMQILTLVSVIFSPLTFIAGIYGMNFEYMPELKWHYSYFVCLIIMLIITIVLIIFFKKKKWF
>NZ_CP017463.1|WP_017636500.1|570671_571721_+|type-2-isopentenyl-diphosphate-Delta-isomerase
MSDFQREQRKNEHVEIAMAQQDAALSDFDKVRFVHHSIPNIDVDDVDLTTRTSHFDLKYPVYINAMTGGSEWTKQINEKLAIVARETGLAMAVGSTHAALRNPKMAESFTIVRETNPDGIIFSNVGADVPVDKAVKAVELLDAQALQIHVNSPQELVMPEGNREFANWMENIEAIVKAVDVPVIVKEVGFGMSKETYKSLLNVGVAYVDVSGRGGTNFVDIENERRLNKDMDYLSNWGQSTVESLLESTDYQDKLNVFASGGLRTPLDAVKCLALGAKAVGMSRPFLNQVEQSGITQTIEYVESFLDHMKKIMTMLDAKNIDELTHKDMIFSQDLLSWIDQRGLDIHRG
>NZ_CP017463.1|WP_017636499.1|571839_573048_-|sodium/glutamate-symporter
MLELDAITTLCLACILYLIGQTIINHVSFLRRICIPAPVIGGLIFAILVAILDSFNIVKIKLDSSFIQNFFMLAFFTTIGLGASLKLFKVGGKVMLLYFMFCGIMAFCQNVIGVSLAKVLNIKPLLGLTAGSMSMEGGHGNAAAYGKTIQDMGIDSAVTAALAAATLGLVFGGLIGGPVVKFLIKRYNLKPEHSDDSFKNYGEVEYNQALHEKYKPTQIFFIQFTILVFCMALGTYIGNTFTDLTNVNIPMYVGSMFVAVFVRNISEAFGFNIVDLKINEEIGDISLGIFLSLALMSIQLTEIYSLALPLIIIVLVQVVFMILFSIFILFRGLGKDYDAAVMVGGFIGHGLGATPNAMANLDVITKKYGNSPKAYLVVPIVGAFLIDLIGVIIVMGFIQFFQ
>NZ_CP017463.1|WP_017636498.1|573377_573701_+|PadR-family-transcriptional-regulator
MNTQFKKGALELIVLLIIKREDQYGYSLVQNISRYMKIAEGTVYPLLRRLVKNGELSTYYQPSTEGPARKYYRLTEQGQGRLATLKEEWQLFSNAVNTFIEESESNE
>NZ_CP017463.1|WP_017636497.1|573693_574254_+|DUF1700-domain-containing-protein
MNKERYLKQLVANLKHMDNTDKQDIYNEYETHFISGKNEGKSEEDIAKQLGDPKMIAKELNATMAIEKVDEKSNLKSIFKAILAVMGLGLFNFFIVLVPAFFILMIFFTLIVFTLILFSAPIFLIIKFATEGSNSIILYDVYMAGLMFGISLMLLAITILLIKWFLKLTVMYLKWNVSFVKGSVHP
>NZ_CP017463.1|WP_017636496.1|574250_575036_+|DUF4097-family-beta-strand-repeat-protein
MRKLIITLFIIGLILSIGFGIGLISQGKKLSSAHHETQLNKEYKDNIKSIQLDVENSDVEIKHGKTFSIKSIGSSDDKVDSKVEKETWHINDQHNQSNINFRIGTMFTNKIIITLPKEMNELTIKDDAGDIKVDNVVSKKTYINVDSGDITLTDSKLGDLKVNNDSGDILMKHIHFTKGKIKNDSGDIEMKQSIPDQPLNVSNDSGDIHINYKNKAKNTSFTALNDSGDTNIYDKELKQHQIGKGDNKVNLSNDSGDITVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017463_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017463_2

918761-919067

Orphan

Consensus_repeat	Method
AGGAACGCCTTAGCTAAAGCTAATGCATAAGAA	CRISPRCasFinder

3 spacers

DEDDh

The CRISPR arrays of NZ_CP017463_2

>merge|NZ_CP017463|2|918761-919067|CRISPRCasFinder
AAGAACGACTGAATTAAAGTTCATTCATACAAAGCCATACTTTTTTGCAAAGCAAAATTAGTATGACTTACCTAATAGTTAAAGCTATTAGGTACATAAAATAACATTTGAATTAAAGTTCATGCATAAGAAAATAGAGGAACGCCTTAGATGAATCTAATGCATAAGAAAAACTAAGGTACTAAAGTACCAGGAAAGCTAAGGAACGCTAAGGAACGCCTTAGCTAAAGCTAATGCATAAGAACTTCTAAGCAATAAATTGCTAAGAAAATAGAGGAACGCCTTAGCTAAAGCTAATGCATAAGAA

>NZ_CP017463|2|2|918761-919067|CRISPRCasFinder
AAGAACGACTGAATTAAAGTTCATTCATACAAA	GCCATACTTTTTTGCAAAGCAAAATTAGTATGACTTACCTAATAGTTAAAGCTATTAGGTACATAA
AATAACATTTGAATTAAAGTTCATGCATAAGAA	AATAGAGGAACGCCTTAGATGAATCTAATGCATAAGAAAAACTAAGGTACTAAAGTACCAGGAAAGCTAAGGAACGCTA
AGGAACGCCTTAGCTAAAGCTAATGCATAAGAA	CTTCTAAGCAATAAATTGCTAAGAAAATAG
AGGAACGCCTTAGCTAAAGCTAATGCATAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017463.1\|WP_017637857.1\|928671_929427_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP017463.1\|WP_017637864.1\|922408_923479_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP017463.1\|WP_046467430.1\|919169_920141_+\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|183982
NZ_CP017463.1\|WP_017637874.1\|907323_908016_+\|heptaprenylglyceryl-phosphate-synthase	unknown	unknown	gnl\|CDD\|235237
NZ_CP017463.1\|WP_046467427.1\|910208_912215_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP017463.1\|WP_046467425.1\|905438_906734_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|176464
NZ_CP017463.1\|WP_029056008.1\|927519_928506_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP017463.1\|WP_017637861.1\|924400_924901_-\|H-type-ferritin-FtnA	unknown	unknown	gnl\|CDD\|153113
NZ_CP017463.1\|WP_046467426.1\|908012_910205_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP017463.1\|WP_017637865.1\|921725_922268_+\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690
NZ_CP017463.1\|WP_046467431.1\|920219_921581_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP017463.1\|WP_046467432.1\|926408_927134_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP017463.1\|WP_017637868.1\|917221_918649_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP017463.1\|WP_017637863.1\|923510_924062_-\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834
NZ_CP017463.1\|WP_017637869.1\|915751_917209_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP017463.1\|WP_046467429.1\|913485_915024_-\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|273981
NZ_CP017463.1\|WP_046467428.1\|912224_913427_+\|lipoprotein	unknown	unknown	gnl\|CDD\|227188
NZ_CP017463.1\|WP_002452273.1\|915447_915750_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP017463.1\|WP_017637860.1\|925095_926409_+\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP017463.1\|WP_017637875.1\|906839_907142_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226893

Protein	Function_ID	Function_description	E-value
NZ_CP017463.1\|WP_017637857.1\|928671_929427_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	4.8791e-125
NZ_CP017463.1\|WP_017637864.1\|922408_923479_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP017463.1\|WP_046467430.1\|919169_920141_+\|diacylglycerol-kinase	gnl\|CDD\|183982	PRK13337, PRK13337, putative lipid kinase; Reviewed.	0
NZ_CP017463.1\|WP_017637874.1\|907323_908016_+\|heptaprenylglyceryl-phosphate-synthase	gnl\|CDD\|235237	PRK04169, PRK04169, heptaprenylglyceryl phosphate synthase.	2.38051e-98
NZ_CP017463.1\|WP_046467427.1\|910208_912215_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP017463.1\|WP_046467425.1\|905438_906734_+\|adenylosuccinate-lyase	gnl\|CDD\|176464	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).	0
NZ_CP017463.1\|WP_029056008.1\|927519_928506_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	5.37502e-58
NZ_CP017463.1\|WP_017637861.1\|924400_924901_-\|H-type-ferritin-FtnA	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	1.90017e-72
NZ_CP017463.1\|WP_046467426.1\|908012_910205_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP017463.1\|WP_017637865.1\|921725_922268_+\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	7.41804e-12
NZ_CP017463.1\|WP_046467431.1\|920219_921581_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	0
NZ_CP017463.1\|WP_046467432.1\|926408_927134_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	8.28869e-112
NZ_CP017463.1\|WP_017637868.1\|917221_918649_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP017463.1\|WP_017637863.1\|923510_924062_-\|3'-5'-exonuclease	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	1.13586e-71
NZ_CP017463.1\|WP_017637869.1\|915751_917209_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP017463.1\|WP_046467429.1\|913485_915024_-\|sodium/proline-symporter-PutP	gnl\|CDD\|273981	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP017463.1\|WP_046467428.1\|912224_913427_+\|lipoprotein	gnl\|CDD\|227188	COG4851, CamS, Protein involved in sex pheromone biosynthesis [General function prediction only].	3.15197e-163
NZ_CP017463.1\|WP_002452273.1\|915447_915750_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	9.98839e-34
NZ_CP017463.1\|WP_017637860.1\|925095_926409_+\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	3.09511e-90
NZ_CP017463.1\|WP_017637875.1\|906839_907142_+\|hypothetical-protein	gnl\|CDD\|226893	COG4496, COG4496, Uncharacterized protein conserved in bacteria [Function unknown].	1.55396e-56

>NZ_CP017463.1|WP_017637868.1|917221_918649_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNRRAVDWAMRASMALNMDIATNSKFDRKNYFYPDNPKAYQISQFDEPIGENGYIDIEVDGKTKRIGITRLHMEEDAGKSTHKDGYSLVDLNRQGTPLIEIVSEPDIRSPQEAYAYLEKLRSIIQYTGVSDCKMEEGSLRCDANISLRPYGQEEFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYVDDEWKERVRQTIPELPDERKAKYVNDLGLPEYDAHVLTLTKEMSDFFEGAIEHGADVKLTSNWLMGGVNEYLNKNQVDLLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAENGGDAKQIMEDKGLVQISDEATLLKFVNEALDNNPQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQKVNQLLKQELDKR
>NZ_CP017463.1|WP_017637869.1|915751_917209_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSIRYESVENLLTLIKNKEIKPSQIVSDIYDAIEETDPTIKSFLALDKENAMKKAQELDELQEKDQMEGKLFGIPMGIKDNIITKDLETTCASKMLEGFVPIYESTVMNKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHSAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPASYCGIVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNALVLEAISGIDANDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVSEDVKKSVKNAVETLKSLGAEVEEVSLPNTKYGIPSYYVIASSEASANLARFDGIRYGYHSKEAQSLEELYKMSRSEGFGDEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFDLGDEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQFNLHDAYEKL
>NZ_CP017463.1|WP_002452273.1|915447_915750_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MTKVTREEVEHIANLARLQISPEETDEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIEGIPQELALKNAKETENGQFKVPAIMNEEDA
>NZ_CP017463.1|WP_046467429.1|913485_915024_-|sodium/proline-symporter-PutP
MLYLGTALNQQVNANWQTYIMIAIYFIILLIIGFYGYKQATGNLSEFMLGGRSIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAMWITIGLTLGAYINYWVVAPRLRVYTEIAGDAITLPDFFKNRLNDQQNIIKIISGLIIVIFFTLYTHSGFVSGGKLFESAFGLNYHYGLILVAIIVIFYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVAMMQLNGLDTFSRVAEMKPTNMDIFKGTTVIGIISLFSWGLGYFGQPHIIVRFMSIKSHKLLPKARRLGISWMAIGLLGAVGVGLTGIAFISERNIKMEDPETLFIIMSQILFHPLVGGFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLIRGEEKAATHQKEFVMVGRLSVLIVAIIAIVIAWYPNDTILNLVGNAWAGFGASFSPLVLFSLYWKDLTRAGAISGMISGALVVIIWIAWIKPLASINELLGMYEIIPGFIVSVIVTYVVSKLTAKPGDFVNNDLAKVKQIVKEK
>NZ_CP017463.1|WP_046467428.1|912224_913427_+|lipoprotein
MKRTIILLISTIFILTACSNDKDKKSDQDTNQSKDSHSSQVKQVATDKNVQGDDYRTILPFKESQSRGLLQDNMANSYNSEGFESGLLELSKEVFPTDKYLYQDGQFLDKKTINAYLDPKYTKKEIDNMSEKEKKKKKANENLGLNPSHQGETDPTKIAEKSPAYLSNILEQDFYGNSDSKGKNIKGMTIGLAMNSKYYYQKEKDGETYSKKLDDKQIEKQGKAMASEMLSRLRENSDLKDIPIHFAIYKQSSQESITPGEFIAGATADDGQTKINDWKSINEKTALLPSSTAADYDESLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKAKQLTVDLPIDYYGQAETIGITQYVTEQAKKYFDNIDEYEIRIKDGNNPRALISKNKDDKEPEVHIYHN
>NZ_CP017463.1|WP_046467427.1|910208_912215_+|NAD-dependent-DNA-ligase-LigA
MNDMQNRVNELHDLLNQYSYEYYVQDNPSVPDSEYDKLLHELIHIEEEHPEYKTSDSPTVRVGGEAQSTFEKVSHDTPMLSLGNAFNEEDLRKFDQRIRDNIGKVEYMCELKIDGLAVSLKYQNGRFVQGLTRGDGTTGEDITENLRTIHAIPLKIKEPLNFEVRGEAYMPRQSFMNLNEEKENNGEQPFANPRNAAAGSLRQLDSKLAAKRKLSVFLYSINDFTDFEATTQSGALDELDQLGFKTNHERERVSDIDGVLKYIEKWTAQREKLSYDIDGIVIKVNDLEQQDEMGFTQKSPRWAIAYKFPAEEVVTELLDIELSIGRTGVVTPTAILEPVRVAGTTVSRASLHNEDLIHERDIRIGDSVVIKKAGDIIPEVVKSILDRRPDDAKTYHMPTHCPSCNHELVRIEGEVALRCINPKCQAQLIEGLIHFVSRQAMNIDGLGTKIIQQLYENNLIKDVADIFYLTEDDLLPLDRMGSKKVENLLEAIHKAKSQSLEHLLFGLGIRHLGVKASRVLAEKYETMDRLIEVTEEELVGIHDIGDKLAQSVVTYLDNEDIRALIQKLKDKNVNMTYKGVKTTEIEGHPEFSGKTIVLTGKLEQMTRNEASQWLQMQGAKVTNSVTKSTDLLIAGADAGSKLTKAEKFGTEIWTEDEFATKQKEINNE
>NZ_CP017463.1|WP_046467426.1|908012_910205_+|DNA-helicase-PcrA
MNSLVKNMNTEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNKAAKEMKARVEQLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKRFEPRMFIGAISNLKNELKTPEDAQNEANDYHSQMVATVYKGYQRQLSRNEALDFDDLIMTTINLFERVPEALEYYQNKFQYIHVDEYQDTNKAQYTLIKLLANKFKNLCVVGDSDQSIYGWRGADIQNILSFEEDYPDAKTIFLEQNYRSTKTILNAANEVIKNNTERKPKGLWTANTGGDKINYYEATTERDEAEYVVKEIMKHQRNGKKYSDMAILYRTNAQSRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVPKRGVGPSSVEKIQTYAVQNNISMFDALGEVDFIGLSKKVTQECISFYEMIQNLIKEQEFLEISEIVEEVLVKSGYRDMLDREQTLESRSRLENLDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTESGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSDDDHEMEEERRICYVAITRAEETLYITNATTRMLFGRSQSNMPSRFLKEIPEDLMESHSGSKRQTIQPKAKPTQKRGFSKRTTSSKKQVTSSDWKVGDKVTHKAWGEGMVSNVNEKNGSVELDIIFKSEGPKRLLAQFAPIEKKED
>NZ_CP017463.1|WP_017637874.1|907323_908016_+|heptaprenylglyceryl-phosphate-synthase
MYNIKQWRHVFKLDPAKTISDNDLDAICMSNTDAIILGGTDNVTEDNVIQLMSRVRRYPLPLVLEVSNIESVMPGFDFYFIPTVLNSNNVKYHNGMLLEALKEYGHVIDFDEVIFEGYLVMNEDSKVAQRTNANTQLDINDIDAYALMANELYRFPIMYLENSGKYGEVDTVKSVKDTLTTTQLFYGGGITTLSQAKEMAEYADTIVVGDIIYKDIKKALKTVKVKESSK
>NZ_CP017463.1|WP_017637875.1|906839_907142_+|hypothetical-protein
MQIEKLRGDALNELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILNRLNIDTKE
>NZ_CP017463.1|WP_046467425.1|905438_906734_+|adenylosuccinate-lyase
MIERYSREEMSSIWTDQNRYEAWLEVEILASEAWSELGYIPKEDVKKIRQNAKVDVERAKEIEQETRHDVVAFTRQVSETLGDERKWVHYGLTSTDVVDTALSYVIKQANDIIEKDLERFIKVLEDKAKNYKYTLMMGRTHGVHAEPTTFGVKMALWYTEMQRNLKRFKDVREEIEVGKMSGAVGTFANIPPEIESYVCKHLGLGAAPVSTQTLQRDRHAYYIATLALIATSLEKFAVEIRNLQKTETREVEEAFAKGQKGSSAMPHKRNPIGSENITGISRVIRGYITTAYENVPLWHERDISHSSAERIMLPDVTIALDYALNRFTNIVDRLTVYEENMQANIDKTFGLIYSQRVLLSLINKGMVREEAYDTVQPKAMKSWETKTPFRELIEQDSKITDVLSKEDLDECFNPKHHLNQVDTIFKRAGLE
>NZ_CP017463.1|WP_046467430.1|919169_920141_+|diacylglycerol-kinase
MRKRARIIYNPTSGKELFKRMLPDVLIKLEKAGYETSAYATEREGDATLEAERALDNNYDILIVAGGDGTLNEVVNGIAEQPNRPRLGIIPMGTVNDFGRALHLPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGSFAYYIKGFEMLPQMKAVDLRIEYDDKVFQGEALLFLLGLTNSMAGFEKLVPDAKLDDGYYTLIIVEKANLAELGHIMTLASRGEHTKHPKVIYEKAKSINISSFTDMQLNVDGEYGGKLPANFLNLERHIDVFTPHDIHNEELIDQPTVTPQLKSEDHQQNEDK
>NZ_CP017463.1|WP_046467431.1|920219_921581_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
METLKKNEIKTGQVLDLTHEGHGVVKIDRYPIFVPNALINETIEYKIIKVKKNFAIGKLLNVIVESDSRVEPPCVYYDKCGGCQLQHMTYQAQLTMKKEQVINLFHRKGSFNDTVIHDTVGMEDPWRYRNKSQIPIGLNNDKKPKMGFYRQRSHDIIDMDSCLIQDEKHQQVMNDVKQLISELNISVYNEKTKKGLLRHLVVRTGHYTNQMMIILVTNGKAFKQANQLVEALVKLHPNVTSIKQNINDAHSNVIMGRKSITLYGTDEIEDKLSEITFNISDQSFYQINSHQTEKLYNQALEYAQLTGNEIVLDTYCGIGTIGLYMAGKSKHVYGVEVVPSAIKDAEENATINQLENTTFVCGKAEEVILKWKAEGIRPDVVMVDPPRKGCDETFIKTLLELNPKRIVYISCNPSTQQRDAQLLSQQYDLKEITPVDMFPQTTHIETVALFERK
>NZ_CP017463.1|WP_017637865.1|921725_922268_+|DUF3267-domain-containing-protein
MHKIDLFPDKINLRRFVLMQIVLVMFVILFTYKWAYKITHIIEQNILLNLVYGFAGFVILLIVHEFIHHILFILFSKGEKPQLKYKKGTMILQYTESCFNRWQFSIIMLAPLIIISSILLVLISTYAYSSLIFMFSIHVGYCVFDILLVSLALASKFKYIQKYDEGLYLYQHKPNEMHHE
>NZ_CP017463.1|WP_017637864.1|922408_923479_+|DNA-polymerase-IV
MEERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASNRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYYVTSRFDAYREASKQIMDIFRSYTEIVEPMSLDEAYLDITHLVRPDLPASTIANFIRRDILEQTELTASAGVSYNKFLAKLASGMNKPNGITVIDYNNVHDILMNLDIGEFPGVGKASEKVMHNNNIFTGQDLYNKDEFELIRLFGKRGRGLYNKARGIDYNEVKATRIRKSVGTERTFATDVNDDDEILRKVWELSGKTAERLNKLQKSGKTVTVKIKTYQYETLSKQTSLRDPVNSETDIYNIAYTLYTELKDPDIPIRLIGVTVGNLEQSAYRNMTIYDFL
>NZ_CP017463.1|WP_017637863.1|923510_924062_-|3'-5'-exonuclease
MKNAFVALDFETANGKRTSICSVGMVKVIDNKITESFHTLVNPNDYFSEQNINVHGIHPEDVVSSPDFAYVYPYMMQFIEELPVVAHNAAFDMNVLHQSIQSIGLETPHLTYFCSYQLAKRTVQSHRYGLKHMMDFYKLDFHGHHDALNDAKACAMITFRLLKHYDDLSSMLNIYGKDLKDKG
>NZ_CP017463.1|WP_017637861.1|924400_924901_-|H-type-ferritin-FtnA
MLNKELLDALNEQMNHEYFAAHAYMAMASYCDSESYEGFANFYIQQAKEERFHGKKIYDYINDRGGHAKFTALPAPKVDFNSILETFKDGLAQEQDVTKRFYNLSEIAHREKDYATISFLNWFLDEQVEEESMFETHIDYLNRIGDDCNTLYLYEKELATRSFDEE
>NZ_CP017463.1|WP_017637860.1|925095_926409_+|Mur-ligase-family-protein
MRQWTATHLAKLARKASRAVGKNGTDLPGQIARRVDQNILRKLAEQVDDIVFISGTNGKTTTSNLIGHTLKANHIDIIHNNEGANMAAGITSAFIMQTTKQTKIAIIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAKSISDKGIKLLLNADDPFVSRLKIASETRVYYGMKAHAHEFEQSTMNESRYCPNCGRLLEYDYIHYNQIGHYHCECGFKREQPKYEVTSFETSPFLKLNIGETSFNMKIAGDFNAYNALAAYTVLRELGLNDESIQKGFETYTSDNGRMQYFSLNQKEAMINLAKNPAGMNASLSVGEQLEGRKVYVISLNDNAADGRDTSWIYDADFEKLSNQDIEAIIVTGNRAEELQLRLKLAEVDVPVVLERDIYKATAKTMDYTGFTVAIPNYTSLSPMLEQLNRSFEGGQS
>NZ_CP017463.1|WP_046467432.1|926408_927134_+|type-1-glutamine-amidotransferase
MKHELTIYHFMSDKLNLYSDIGNIIALKMRAKKRGIQLKVVEINETDNVTFDDCDIFFIGGGSDREQSLATKQLSKIKTPLKEAIEDGMPGLTICGGYQFLGTKYITPDGTELDGLGILDFYTESKENRLTGDIIIESDTFGTIVGFENHGGRTFHNFGTLGHVTHGYGNNDTDRQEGIHYKNLLGTYLHGPILPKNHEITDYLLEKACERKGIPFEPKQLDNTEEEAAKQVLIDRANKNK
>NZ_CP017463.1|WP_029056008.1|927519_928506_-|aromatic-acid-exporter-family-protein
MNEKWYKHIIGARTIKTGLATFFTTVFCMLLNLTPIFAILTAIVTIEPTAKASIKKGYRRLPATVIGALFAVVFTFIFGDQSPFAYACSATFTILACTKLNLQVGTTVAVLTSVAMIPGIHEAYVFNFFSRLLTALIGLVTAGLVNFMILPPKYYSQLEDNLYRSEDKMYDLFNQRCHELLLGRFQSDKSNKKIIQISNLNQKIDLLTGYQRDELTYHQNKAEDWKKLNKLTSRAYTNRLLMTHLANIIYLPKDAYVFFTPDEKLAILKISTSISHILCDGTFKRERKSASTLKSSVKQLEEFDQNQIKSHLIYEILLIYKILDHRYA
>NZ_CP017463.1|WP_017637857.1|928671_929427_+|type-I-methionyl-aminopeptidase
MIVKTDEELQALKEIGYICAKVRDTMQAETKPGITTKELDNIAKELFEEHGALSAPIHDENFPGQTCISVNEEVAHGIPGKRIIREGDLVNIDVSALKNGFYADTGISFVVGEASDPLKQKVCDVATMAFENAMAKVKPGTKLSNIGKAVHATARQNDLTVIKNLTGHGVGQSLHEAPNHVMNYYDPKDKTLLKEGLVIAVEPFISSKATFVTEGKNEWAFETSDKSYVAQIEHTVIVTKDGPLLTTKIDN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017463_2	2.3\|919005\|30\|NZ_CP017463\|CRISPRCasFinder	919005-919034	30	NZ_CP054196	Glaesserella parasuis strain YHP170504 plasmid unnamed2, complete sequence	6808-6837	5	0.833
NZ_CP017463_2	2.3\|919005\|30\|NZ_CP017463\|CRISPRCasFinder	919005-919034	30	NC_006829	Haemophilus parasuis plasmid pHS-Rec, complete sequence	4549-4578	5	0.833
NZ_CP017463_2	2.3\|919005\|30\|NZ_CP017463\|CRISPRCasFinder	919005-919034	30	NC_007800	Bibersteinia trehalosi plasmid pCCK13698, complete sequence	5268-5297	5	0.833
NZ_CP017463_2	2.3\|919005\|30\|NZ_CP017463\|CRISPRCasFinder	919005-919034	30	NZ_CP018033	Glaesserella parasuis D74 plasmid pD74, complete sequence	10388-10417	5	0.833
NZ_CP017463_2	2.3\|919005\|30\|NZ_CP017463\|CRISPRCasFinder	919005-919034	30	NZ_CP018879	Bacillus megaterium strain JX285 plasmid 6, complete sequence	14717-14746	9	0.7

1. spacer 2.3|919005|30|NZ_CP017463|CRISPRCasFinder matches to NZ_CP054196 (Glaesserella parasuis strain YHP170504 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

cttctaagcaataaattgctaagaaaatag	CRISPR spacer
tttctaagcaataaattgctaagaacttct	Protospacer
.************************  *

2. spacer 2.3|919005|30|NZ_CP017463|CRISPRCasFinder matches to NC_006829 (Haemophilus parasuis plasmid pHS-Rec, complete sequence) position: , mismatch: 5, identity: 0.833

cttctaagcaataaattgctaagaaaatag	CRISPR spacer
tttctaagcaataaattgctaagaacttct	Protospacer
.************************  *

3. spacer 2.3|919005|30|NZ_CP017463|CRISPRCasFinder matches to NC_007800 (Bibersteinia trehalosi plasmid pCCK13698, complete sequence) position: , mismatch: 5, identity: 0.833

cttctaagcaataaattgctaagaaaatag	CRISPR spacer
tttctaagcaataaattgctaagaacttct	Protospacer
.************************  *

4. spacer 2.3|919005|30|NZ_CP017463|CRISPRCasFinder matches to NZ_CP018033 (Glaesserella parasuis D74 plasmid pD74, complete sequence) position: , mismatch: 5, identity: 0.833

cttctaagcaataaattgctaagaaaatag	CRISPR spacer
tttctaagcaataaattgctaagaacttct	Protospacer
.************************  *

5. spacer 2.3|919005|30|NZ_CP017463|CRISPRCasFinder matches to NZ_CP018879 (Bacillus megaterium strain JX285 plasmid 6, complete sequence) position: , mismatch: 9, identity: 0.7

cttctaagcaataaattgctaagaaaatag	CRISPR spacer
atgactgtgaataaactgctaagaaaatag	Protospacer
 *  . .  ******.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

860143 : 872544

Staphylococcus_phage(57.14%)

integrase,terminase

attL 862091:862110|attR 877738:877757

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096807752.1\|860143_860431_+	co-chaperone GroES	A0A221S4A5	uncultured_virus	1.4e-13	43.0
WP_046467587.1\|860486_862109_+	chaperonin GroEL	A0A240F779	uncultured_virus	1.2e-157	54.2
862091:862110	attL	NA	NA	NA	NA
WP_096807753.1\|862223_863399_-\|integrase	site-specific integrase	A0A2H4JBC4	uncultured_Caudovirales_phage	1.7e-214	96.2
WP_096807871.1\|863407_863704_-	hypothetical protein	NA	NA	NA	NA
WP_157772498.1\|864082_864301_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096807755.1\|864305_864626_+	helix-turn-helix domain-containing protein	A0A2H4JE99	uncultured_Caudovirales_phage	1.4e-46	90.6
WP_002491489.1\|864765_865320_+	hypothetical protein	A0A1W6JPA6	Staphylococcus_phage	2.0e-16	61.8
WP_096807756.1\|865671_865962_+	DUF1474 family protein	A0A1W6JPG5	Staphylococcus_phage	2.2e-35	82.6
WP_096807757.1\|866058_868314_+	DNA primase	A0A2H4JCU9	uncultured_Caudovirales_phage	0.0e+00	76.1
WP_096807758.1\|868596_868941_+	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.6e-38	72.5
WP_096807759.1\|868942_869584_+	pathogenicity island protein	Q4ZE67	Staphylococcus_phage	6.4e-91	77.0
WP_096807760.1\|870030_870378_+	pathogenicity island protein	Q4ZE66	Staphylococcus_phage	1.8e-39	72.0
WP_096807761.1\|870399_871110_+	hypothetical protein	Q4ZE82	Staphylococcus_phage	1.9e-32	32.7
WP_096807762.1\|871170_871629_+	pathogenicity island protein	Q4ZE87	Staphylococcus_phage	6.7e-34	57.3
WP_096807763.1\|871631_871973_+	pathogenicity island family protein	Q4ZE86	Staphylococcus_phage	2.0e-11	33.0
WP_096807764.1\|871977_872544_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	1.1e-57	60.8
877738:877757	attR	NA	NA	NA	NA

DBSCAN-SWA_2

993059 : 1022319

Staphylococcus_phage(88.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466844.1\|993059_993299_-	hypothetical protein	Q4ZCB8	Staphylococcus_virus	4.9e-12	46.2
WP_029055622.1\|993751_995161_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.0e-174	63.0
WP_052728885.1\|995150_996167_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	1.9e-97	55.3
WP_017637320.1\|996147_996405_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.7e-39	89.4
WP_081581209.1\|996465_996939_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	3.8e-48	58.6
WP_017637318.1\|996925_997717_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	4.3e-105	75.5
WP_017637317.1\|997740_999333_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	8.5e-286	89.2
WP_046466842.1\|999715_1000915_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.1e-196	87.4
WP_046466841.1\|1001036_1001945_+	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.4e-104	78.6
WP_096807777.1\|1002064_1002901_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.2e-112	69.3
WP_017637313.1\|1002964_1003321_-	CrcB family protein	NA	NA	NA	NA
WP_017637312.1\|1003317_1003680_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	1.1e-31	59.8
WP_017638160.1\|1003775_1004081_-	hypothetical protein	NA	NA	NA	NA
WP_017638161.1\|1004346_1005060_+	transaldolase	E3SM94	Prochlorococcus_phage	1.1e-19	34.4
WP_046466840.1\|1005249_1005705_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	9.6e-25	58.5
WP_017638163.1\|1005679_1006126_-	hypothetical protein	NA	NA	NA	NA
WP_046466838.1\|1006130_1006619_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	6.6e-32	52.3
WP_029055630.1\|1006815_1007040_+	hypothetical protein	NA	NA	NA	NA
WP_046466837.1\|1007321_1008182_+	autolysin	Q4ZCC7	Staphylococcus_virus	7.6e-39	40.9
WP_096807778.1\|1008553_1010053_+	pyridine nucleotide-disulfide oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	1.4e-19	78.6
WP_017638290.1\|1010539_1011583_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.6e-139	67.9
WP_046466836.1\|1011589_1012222_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.7e-84	73.8
WP_017638288.1\|1012238_1013420_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.9e-179	76.6
WP_017638287.1\|1013432_1013891_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.2e-61	88.0
WP_046466835.1\|1013931_1014933_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.2e-141	75.8
WP_017638285.1\|1015165_1015993_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_017638284.1\|1016355_1016757_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_017638283.1\|1016808_1017378_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	7.2e-70	69.2
WP_017638282.1\|1017374_1018328_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	1.5e-67	83.2
WP_017638281.1\|1018433_1019615_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	4.8e-177	79.3
WP_046466834.1\|1019904_1022319_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.6

DBSCAN-SWA_3

1154407 : 1166142

uncultured_Mediterranean_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017637059.1\|1154407_1155412_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	2.6e-06	26.0
WP_072291849.1\|1155413_1156439_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_017637061.1\|1156460_1157600_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.1e-85	46.1
WP_017637062.1\|1157615_1157876_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	9.7e-06	41.2
WP_046466768.1\|1158195_1160475_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	8.2e-32	33.9
WP_046466767.1\|1160598_1162881_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	5.6e-65	29.1
WP_029055702.1\|1162895_1163414_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.3e-29	46.5
WP_046466766.1\|1163952_1166142_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	1.5e-11	38.0

DBSCAN-SWA_4

1738073 : 1746542

Synechococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466545.1\|1738073_1738640_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.2e-28	37.4
WP_029055540.1\|1738642_1739671_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	7.1e-68	44.8
WP_046466544.1\|1739663_1741148_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-45	32.6
WP_017637039.1\|1741126_1743316_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.1e-137	39.0
WP_046466543.1\|1743308_1743980_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_096807816.1\|1743981_1744242_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_017637036.1\|1744241_1744946_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SE76	Cyanophage	1.9e-48	43.3
WP_072291800.1\|1744945_1746112_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_017637034.1\|1746059_1746542_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.1e-21	44.7

DBSCAN-SWA_5

1922894 : 2004653

105

uncultured_Caudovirales_phage(64.56%)

portal,tail,integrase,transposase,protease,head,terminase

attL 1956091:1956140|attR 2000462:2000511

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096807830.1\|1922894_1924067_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_096807879.1\|1924037_1924265_-	hypothetical protein	NA	NA	NA	NA
WP_002455767.1\|1924833_1925292_-	transcriptional regulator	NA	NA	NA	NA
WP_000855537.1\|1925557_1926199_-	fusidic acid resistance EF-G-binding protein FusB	NA	NA	NA	NA
WP_080392076.1\|1926935_1927190_-	DUF3102 domain-containing protein	A0A2H4JAH5	uncultured_Caudovirales_phage	3.3e-27	69.2
WP_088922757.1\|1927366_1928407_-	hypothetical protein	NA	NA	NA	NA
WP_060554433.1\|1928399_1929110_-	hypothetical protein	NA	NA	NA	NA
WP_060554431.1\|1929111_1929585_-	hypothetical protein	NA	NA	NA	NA
WP_060554429.1\|1929733_1930219_-\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	4.2e-55	65.0
WP_060554427.1\|1930278_1930965_-	hypothetical protein	Q4ZE82	Staphylococcus_phage	1.1e-27	31.8
WP_060554425.1\|1930984_1931518_-	hypothetical protein	A0A2H4JD56	uncultured_Caudovirales_phage	3.2e-11	31.2
WP_060554423.1\|1931530_1931869_-	hypothetical protein	Q4ZE66	Staphylococcus_phage	9.6e-38	72.5
WP_060554421.1\|1932207_1932849_-	pathogenicity island protein	Q4ZE67	Staphylococcus_phage	6.4e-91	76.1
WP_060554420.1\|1932849_1933206_-	hypothetical protein	NA	NA	NA	NA
WP_060554419.1\|1933198_1933552_-	hypothetical protein	A0A2H4JBD4	uncultured_Caudovirales_phage	7.9e-43	67.3
WP_060554418.1\|1933800_1935171_-	DNA primase	A0A2H4JBE3	uncultured_Caudovirales_phage	2.8e-253	93.6
WP_060554417.1\|1935182_1936052_-	mobile element-associated protein	A0A2H4JEH3	uncultured_Caudovirales_phage	3.6e-145	82.7
WP_060554416.1\|1936136_1936478_-	hypothetical protein	NA	NA	NA	NA
WP_060554415.1\|1936482_1936692_-	hypothetical protein	Q4ZE76	Staphylococcus_phage	1.2e-17	68.3
WP_032603302.1\|1936867_1937086_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_032603303.1\|1937239_1937977_+	helix-turn-helix transcriptional regulator	A0A1W6JQE6	Staphylococcus_phage	1.1e-06	28.8
WP_060554440.1\|1937991_1939098_+\|integrase	site-specific integrase	H0UST3	Bacillus_phage	1.2e-76	43.6
WP_017636860.1\|1939750_1940215_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.2e-76	92.9
WP_046466472.1\|1940236_1942612_-	ribonuclease R	Q0GXV6	Lactococcus_phage	4.3e-92	38.8
WP_017636862.1\|1942646_1943387_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_017636863.1\|1943560_1943794_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_017636864.1\|1943862_1944321_-	hypothetical protein	NA	NA	NA	NA
WP_017636865.1\|1944538_1945843_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	8.1e-194	79.6
WP_029056543.1\|1945983_1947501_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_017636867.1\|1947503_1948265_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_029056542.1\|1948369_1949560_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_017636869.1\|1949694_1950702_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_029056541.1\|1950753_1951767_-	central glycolytic genes regulator	NA	NA	NA	NA
WP_017636871.1\|1952198_1952420_+	hypothetical protein	NA	NA	NA	NA
WP_046466470.1\|1952527_1953214_-	DUF4887 domain-containing protein	NA	NA	NA	NA
WP_046466469.1\|1953990_1954890_+	TIGR01777 family protein	NA	NA	NA	NA
WP_029056537.1\|1954906_1955125_+	hypothetical protein	NA	NA	NA	NA
WP_017636876.1\|1955250_1955841_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.8e-53	55.3
1956091:1956140	attL	NA	NA	NA	NA
WP_072291796.1\|1957392_1958805_-	CHAP domain-containing protein	A0A2H4J2K9	uncultured_Caudovirales_phage	3.7e-285	98.9
WP_072291795.1\|1958816_1959068_-	PTS mannose transporter subunit IID	A0A2H4J5P6	uncultured_Caudovirales_phage	2.6e-40	98.8
WP_072291794.1\|1959118_1959520_-	hypothetical protein	A0A2H4J9S2	uncultured_Caudovirales_phage	1.2e-55	83.5
WP_072291793.1\|1959503_1959923_-	hypothetical protein	A0A2H4J968	uncultured_Caudovirales_phage	5.5e-67	87.8
WP_072291792.1\|1959933_1960215_-	hypothetical protein	A0A2H4J2K8	uncultured_Caudovirales_phage	3.8e-40	91.4
WP_072291791.1\|1960400_1964291_-	hypothetical protein	A0A2H4JAK2	uncultured_Caudovirales_phage	0.0e+00	89.6
WP_072291790.1\|1964303_1965794_-\|tail	phage tail protein	A0A2H4J7M6	uncultured_Caudovirales_phage	3.3e-268	89.7
WP_096807832.1\|1965797_1971635_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	0.0e+00	82.2
WP_002452342.1\|1971675_1971834_-	hypothetical protein	A0A2H4J1W1	uncultured_Caudovirales_phage	5.8e-22	100.0
WP_029056527.1\|1971911_1972229_-	hypothetical protein	A0A2H4J3G5	uncultured_Caudovirales_phage	6.8e-54	100.0
WP_072291788.1\|1972328_1973018_-\|tail	phage tail protein	A0A2H4J9R4	uncultured_Caudovirales_phage	3.7e-113	99.0
WP_072291787.1\|1973082_1973487_-	hypothetical protein	A0A2H4J6T2	uncultured_Caudovirales_phage	3.2e-72	98.5
WP_072291786.1\|1973487_1973883_-	hypothetical protein	A0A2H4JA97	uncultured_Caudovirales_phage	3.1e-64	87.0
WP_072291785.1\|1973879_1974230_-\|head,tail	phage head-tail adapter protein	A0A2H4J225	uncultured_Caudovirales_phage	5.8e-62	99.1
WP_002452336.1\|1974213_1974501_-	hypothetical protein	A0A2H4JAM0	uncultured_Caudovirales_phage	1.1e-47	98.9
WP_072291783.1\|1975927_1976698_-\|protease	Clp protease ClpP	A0A2H4J9Z1	uncultured_Caudovirales_phage	2.4e-129	93.8
WP_072291782.1\|1976687_1977851_-\|portal	phage portal protein	A0A2H4J9T2	uncultured_Caudovirales_phage	1.9e-210	96.1
WP_072291781.1\|1977862_1979515_-\|terminase	terminase large subunit	A0A2H4J6U3	uncultured_Caudovirales_phage	0.0e+00	96.5
WP_072291780.1\|1979511_1979877_-	hypothetical protein	A0A2H4J959	uncultured_Caudovirales_phage	1.1e-60	99.2
WP_029056519.1\|1980014_1980479_-	hypothetical protein	A0A2H4J2Q3	uncultured_Caudovirales_phage	2.9e-85	100.0
WP_096807833.1\|1980472_1980784_-	HNH endonuclease	A0A2H4J5U5	uncultured_Caudovirales_phage	3.5e-55	97.1
WP_029056517.1\|1980998_1981412_-	hypothetical protein	A0A2H4J3L6	uncultured_Caudovirales_phage	8.0e-71	97.1
WP_017636903.1\|1981520_1981895_-	hypothetical protein	NA	NA	NA	NA
WP_017636904.1\|1981980_1982184_-	DUF1514 domain-containing protein	A0A0D4DCK3	Staphylococcus_phage	4.7e-08	48.4
WP_141768793.1\|1982183_1982357_-	hypothetical protein	A0A2H4J2Q0	uncultured_Caudovirales_phage	7.5e-23	94.6
WP_072291779.1\|1982349_1982649_-	hypothetical protein	NA	NA	NA	NA
WP_072291778.1\|1982641_1982794_-	DUF1381 domain-containing protein	A0A2H4J208	uncultured_Caudovirales_phage	2.1e-13	76.0
WP_072291777.1\|1982793_1983195_-	hypothetical protein	A0A0D3MVN6	Staphylococcus_phage	2.4e-51	73.7
WP_072291775.1\|1983460_1983661_-	hypothetical protein	W5R8V6	Staphylococcus_phage	2.2e-26	87.7
WP_072291774.1\|1983697_1984018_-	hypothetical protein	A0A2H4J4F6	uncultured_Caudovirales_phage	1.8e-49	95.2
WP_072291773.1\|1984017_1984203_-	hypothetical protein	A0A2H4J2P1	uncultured_Caudovirales_phage	3.7e-28	96.7
WP_072291772.1\|1984189_1984474_-	DUF1024 family protein	A0A2H4J2P4	uncultured_Caudovirales_phage	1.0e-16	59.6
WP_096807834.1\|1984473_1984692_-	hypothetical protein	A1KX14	Staphylococcus_virus	1.2e-12	62.3
WP_072291770.1\|1984703_1984937_-	hypothetical protein	A0A2H4J3K8	uncultured_Caudovirales_phage	8.3e-33	86.8
WP_072291769.1\|1984933_1985134_-	hypothetical protein	A0A2H4J2P2	uncultured_Caudovirales_phage	4.6e-24	86.4
WP_072291768.1\|1985130_1985349_-	hypothetical protein	NA	NA	NA	NA
WP_072291767.1\|1985332_1985788_-	DUF3310 domain-containing protein	A0A2H4JAP3	uncultured_Caudovirales_phage	5.0e-74	93.1
WP_072291766.1\|1985792_1986191_-	hypothetical protein	A0A2H4J7R6	uncultured_Caudovirales_phage	2.9e-17	42.3
WP_072291765.1\|1986362_1986770_-	RusA family crossover junction endodeoxyribonuclease	A0A2H4J8S2	uncultured_Caudovirales_phage	1.3e-65	89.6
WP_072291764.1\|1986779_1987007_-	DUF3269 family protein	A0A2H4J2N4	uncultured_Caudovirales_phage	2.4e-32	90.5
WP_072291763.1\|1986975_1987206_-	hypothetical protein	A0A2H4J5S4	uncultured_Caudovirales_phage	9.4e-37	94.7
WP_096807835.1\|1987202_1988438_-	AAA family ATPase	A0A2H4J2P7	uncultured_Caudovirales_phage	3.8e-225	98.3
WP_072291909.1\|1988430_1988796_-	hypothetical protein	A0A2H4JBD3	uncultured_Caudovirales_phage	3.2e-63	99.2
WP_072291908.1\|1988799_1989522_-	hypothetical protein	A0A2H4J2N5	uncultured_Caudovirales_phage	4.6e-98	97.9
WP_072291907.1\|1989511_1990189_-	hypothetical protein	A0A2H4J4Z9	uncultured_Caudovirales_phage	9.3e-117	88.9
WP_072291906.1\|1990200_1990614_-	single-stranded DNA-binding protein	A0A0D4DD48	Staphylococcus_phage	4.6e-58	82.5
WP_072291905.1\|1990606_1991236_-	DUF1071 domain-containing protein	A0A2H4J4I1	uncultured_Caudovirales_phage	9.0e-106	90.0
WP_072291904.1\|1991228_1991456_-	DUF2483 domain-containing protein	A0A2H4J633	uncultured_Caudovirales_phage	1.9e-29	84.0
WP_072291903.1\|1991427_1991655_-	hypothetical protein	A0A2H4J2X8	uncultured_Caudovirales_phage	4.0e-24	76.0
WP_157772506.1\|1992008_1992488_+	DUF2321 domain-containing protein	U3PDZ3	Staphylococcus_phage	1.9e-60	70.1
WP_072291901.1\|1992480_1992726_-	hypothetical protein	A0A1W6JPQ6	Staphylococcus_phage	2.7e-26	75.3
WP_017636932.1\|1992728_1993046_-	DUF771 domain-containing protein	A0A2H4J474	uncultured_Caudovirales_phage	8.1e-55	100.0
WP_017636934.1\|1993216_1993450_-	hypothetical protein	A0A2H4J7P2	uncultured_Caudovirales_phage	3.7e-33	100.0
WP_017636936.1\|1993739_1993958_-	hypothetical protein	Q4ZCA9	Staphylococcus_virus	1.6e-17	61.4
WP_017636937.1\|1993969_1994761_-	phage antirepressor Ant	A0A2H4J5J5	uncultured_Caudovirales_phage	7.8e-115	79.1
WP_009382133.1\|1994760_1994955_-	helix-turn-helix transcriptional regulator	A0A0F6N3M9	Staphylococcus_phage	1.1e-22	89.1
WP_017636938.1\|1995218_1995557_+	helix-turn-helix transcriptional regulator	R4IH08	Staphylococcus_phage	4.9e-42	73.6
WP_096807836.1\|1995570_1996242_+	ImmA/IrrE family metallo-endopeptidase	A0A0F6N3H6	Staphylococcus_phage	4.2e-45	46.1
WP_072291900.1\|1996544_1996733_+	hypothetical protein	NA	NA	NA	NA
WP_017636942.1\|1997002_1997404_+	sporulation protein	A0A2H4JAR6	uncultured_Caudovirales_phage	3.0e-38	59.4
WP_029056498.1\|1997378_1997864_+	hypothetical protein	H9A0X8	Staphylococcus_phage	2.1e-09	76.3
WP_017636944.1\|1998037_1998298_+	transcriptional regulator	NA	NA	NA	NA
WP_017636947.1\|1999361_2000399_+\|integrase	site-specific integrase	A0A2H4J2K7	uncultured_Caudovirales_phage	1.3e-194	99.4
WP_017636948.1\|2000535_2001480_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.0e-53	39.6
2000462:2000511	attR	NA	NA	NA	NA
WP_046466468.1\|2001632_2002628_-	YvcK family protein	A1IMD5	Streptococcus_phage	1.5e-51	42.6
WP_017636950.1\|2002624_2003536_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.6e-07	33.6
WP_029056494.1\|2003711_2004653_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.6e-82	49.0

DBSCAN-SWA_6

2036678 : 2050278

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466457.1\|2036678_2037452_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	6.9e-15	31.2
WP_017637111.1\|2037448_2038408_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	8.0e-05	53.3
WP_096807841.1\|2038397_2039366_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.1e-142	80.4
WP_002450939.1\|2039575_2040550_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	1.1e-179	96.3
WP_046466455.1\|2040940_2043046_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	94.4
WP_026083473.1\|2043008_2043407_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	3.7e-57	78.8
WP_096807842.1\|2044201_2045086_+	DMT family transporter	NA	NA	NA	NA
WP_096807843.1\|2045103_2045604_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	4.5e-52	66.2
WP_017636673.1\|2045935_2047441_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	7.8e-55	31.7
WP_017636672.1\|2047589_2048519_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
WP_029056470.1\|2048595_2049132_-	5'-3'-deoxyribonucleotidase	A0A0A0PKY7	Bacillus_phage	3.7e-28	37.8
WP_046466453.1\|2049222_2050278_-	histidinol-phosphate transaminase	A0A142C026	Faustovirus	1.4e-18	25.0

DBSCAN-SWA_7

2062868 : 2069723

Pandoravirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466445.1\|2062868_2064014_-	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	6.4e-25	35.5
WP_046466444.1\|2063997_2064591_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	9.8e-38	43.0
WP_017637526.1\|2064999_2065671_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.1e-64	54.9
WP_046466443.1\|2065673_2066093_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_017637528.1\|2066092_2066806_+	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	5.5e-51	41.9
WP_029056457.1\|2066909_2067494_+	hypothetical protein	NA	NA	NA	NA
WP_046466442.1\|2067613_2068720_-	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	2.5e-63	42.9
WP_046466441.1\|2068880_2069723_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.1e-53	42.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP017465

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8932 : 16206

Staphylococcus_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195429.1\|8932_10105_+\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_000393259.1\|10161_10554_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
WP_001028144.1\|10554_11994_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
WP_096807830.1\|12123_13296_-\|transposase	IS256-like element IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
WP_096807892.1\|13725_14028_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_096807893.1\|14152_14554_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	5.8e-58	82.8
WP_096807894.1\|14889_15498_-	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	2.4e-15	29.5
WP_001829991.1\|15627_16206_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	9.3e-41	50.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017464

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

2. NZ_CP017463

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP017465

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection