CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	3 crisprs	DinG,cas3,DEDDh,c2c9_V-U4,RT,csa3	2	19
NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	0 crisprs	RT	0	2
NZ_CP030774	Shigella flexneri 1c strain Y394 plasmid pNV-Y394, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP020753_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020753_1

64144-64259

Orphan

Consensus_repeat	Method
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020753_1

>merge|NZ_CP020753|1|64144-64259|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTT

>NZ_CP020753|1|1|64144-64259|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	GAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCA
GATAAGACGCGTCAGCGTCGCATCAGGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020753.1\|WP_000746145.1\|53674_56029_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP020753.1\|WP_001148403.1\|68794_69559_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP020753.1\|WP_001295536.1\|71940_72924_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP020753.1\|WP_005053586.1\|73087_74743_-\|DNA-binding-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP020753.1\|WP_000235706.1\|70354_71965_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
NZ_CP020753.1\|WP_128881980.1\|75064_76039_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129977
NZ_CP020753.1\|WP_001200573.1\|56283_57099_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP020753.1\|WP_000916288.1\|69672_70371_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NZ_CP020753.1\|WP_000951768.1\|65791_67492_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP020753.1\|WP_000525176.1\|57215_57875_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP020753.1\|WP_005065955.1\|67830_68709_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP020753.1\|WP_000963946.1\|64278_65781_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP020753.1\|WP_025745283.1\|57886_60793_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP020753.1\|WP_000910215.1\|63383_64079_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP020753.1\|WP_000800457.1\|52335_53622_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP020753.1\|WP_000035610.1\|60957_63309_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP020753.1\|WP_001065381.1\|50528_51350_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP020753.1\|WP_000610901.1\|50148_50526_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP020753.1\|WP_001248770.1\|74831_74963_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NZ_CP020753.1\|WP_000241261.1\|51346_52336_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696

Protein	Function_ID	Function_description	E-value
NZ_CP020753.1\|WP_000746145.1\|53674_56029_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP020753.1\|WP_001148403.1\|68794_69559_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.87417e-49
NZ_CP020753.1\|WP_001295536.1\|71940_72924_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP020753.1\|WP_005053586.1\|73087_74743_-\|DNA-binding-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP020753.1\|WP_000235706.1\|70354_71965_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NZ_CP020753.1\|WP_128881980.1\|75064_76039_+\|MFS-transporter	gnl\|CDD\|129977	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	6.0353e-86
NZ_CP020753.1\|WP_001200573.1\|56283_57099_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
NZ_CP020753.1\|WP_000916288.1\|69672_70371_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	7.93437e-165
NZ_CP020753.1\|WP_000951768.1\|65791_67492_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP020753.1\|WP_000525176.1\|57215_57875_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.37214e-159
NZ_CP020753.1\|WP_005065955.1\|67830_68709_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP020753.1\|WP_000963946.1\|64278_65781_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP020753.1\|WP_025745283.1\|57886_60793_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP020753.1\|WP_000910215.1\|63383_64079_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	2.636e-179
NZ_CP020753.1\|WP_000800457.1\|52335_53622_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP020753.1\|WP_000035610.1\|60957_63309_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP020753.1\|WP_001065381.1\|50528_51350_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.76119e-148
NZ_CP020753.1\|WP_000610901.1\|50148_50526_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NZ_CP020753.1\|WP_001248770.1\|74831_74963_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	0.00206924
NZ_CP020753.1\|WP_000241261.1\|51346_52336_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0

>NZ_CP020753.1|WP_000910215.1|63383_64079_-|L-ribulose-5-phosphate-4-epimerase
MLKDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP020753.1|WP_000035610.1|60957_63309_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIHADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDIIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NZ_CP020753.1|WP_025745283.1|57886_60793_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQELAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NZ_CP020753.1|WP_000525176.1|57215_57875_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
>NZ_CP020753.1|WP_001200573.1|56283_57099_+|co-chaperone-DjlA
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NZ_CP020753.1|WP_000746145.1|53674_56029_-|LPS-assembly-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKFLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYHYASPEYIQATLPKYYSTAEQYKNGISQVGAVASRPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>NZ_CP020753.1|WP_000800457.1|52335_53622_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>NZ_CP020753.1|WP_000241261.1|51346_52336_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDASIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NZ_CP020753.1|WP_001065381.1|50528_51350_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>NZ_CP020753.1|WP_000610901.1|50148_50526_-|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>NZ_CP020753.1|WP_000963946.1|64278_65781_-|L-arabinose-isomerase
MAIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPYKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLPVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR
>NZ_CP020753.1|WP_000951768.1|65791_67492_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSMVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDTPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL
>NZ_CP020753.1|WP_005065955.1|67830_68709_+|arabinose-operon-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGCHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPYFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>NZ_CP020753.1|WP_001148403.1|68794_69559_+|DedA-family-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
>NZ_CP020753.1|WP_000916288.1|69672_70371_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELLSGKASASAILGITG
>NZ_CP020753.1|WP_000235706.1|70354_71965_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>NZ_CP020753.1|WP_001295536.1|71940_72924_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>NZ_CP020753.1|WP_005053586.1|73087_74743_-|DNA-binding-transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHITDIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPCEWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEKKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>NZ_CP020753.1|WP_001248770.1|74831_74963_+|glucose-uptake-inhibitor-SgrT
MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES
>NZ_CP020753.1|WP_128881980.1|75064_76039_+|MFS-transporter
MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALARVELPSENALSMQGDWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSDLGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVVAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNTISTGVILAGVIQGAIAQSRGHFAVYWVIAIISVVALFLTAKVKDV

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Crispr_ID: NZ_CP020753_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020753_2

2386957-2387083

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020753_2

>merge|NZ_CP020753|2|2386957-2387083|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP020753|2|2|2386957-2387083|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020753.1\|WP_128882039.1\|2389690_2390767_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP020753.1\|WP_001209895.1\|2394020_2395280_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP020753.1\|WP_094081542.1\|2382505_2383734_+\|IS3-like-element-IS2-family-transposase	unknown	unknown	gnl\|CDD\|181829
NZ_CP020753.1\|WP_001075180.1\|2384620_2386906_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP020753.1\|WP_000747032.1\|2369244_2370413_-\|IS3-like-element-IS911-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP020753.1\|WP_001281242.1\|2375218_2377846_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP020753.1\|WP_072075176.1\|2378842_2380777_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP020753.1\|WP_000990752.1\|2377992_2378715_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP020753.1\|WP_000140529.1\|2396659_2397610_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP020753.1\|WP_072075175.1\|2380786_2382442_-\|autotransporter	unknown	unknown	gnl\|CDD\|182059
NZ_CP020753.1\|WP_000857257.1\|2392402_2394031_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP020753.1\|WP_128882040.1\|2397650_2398121_-\|aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_CP020753.1\|WP_001215763.1\|2372761_2373385_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP020753.1\|WP_001225855.1\|2364539_2365316_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP020753.1\|WP_000135039.1\|2388269_2388524_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP020753.1\|WP_000332036.1\|2387139_2388270_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP020753.1\|WP_000301054.1\|2388577_2389228_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP020753.1\|WP_005046836.1\|2367533_2367692_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP020753.1\|WP_000948723.1\|2390771_2392130_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP020753.1\|WP_001000362.1\|2395276_2396467_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422

Protein	Function_ID	Function_description	E-value
NZ_CP020753.1\|WP_128882039.1\|2389690_2390767_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP020753.1\|WP_001209895.1\|2394020_2395280_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP020753.1\|WP_094081542.1\|2382505_2383734_+\|IS3-like-element-IS2-family-transposase	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0
NZ_CP020753.1\|WP_001075180.1\|2384620_2386906_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP020753.1\|WP_000747032.1\|2369244_2370413_-\|IS3-like-element-IS911-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.76294e-152
NZ_CP020753.1\|WP_001281242.1\|2375218_2377846_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP020753.1\|WP_072075176.1\|2378842_2380777_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP020753.1\|WP_000990752.1\|2377992_2378715_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.1156e-171
NZ_CP020753.1\|WP_000140529.1\|2396659_2397610_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP020753.1\|WP_072075175.1\|2380786_2382442_-\|autotransporter	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP020753.1\|WP_000857257.1\|2392402_2394031_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP020753.1\|WP_128882040.1\|2397650_2398121_-\|aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	1.00113e-108
NZ_CP020753.1\|WP_001215763.1\|2372761_2373385_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	2.24238e-138
NZ_CP020753.1\|WP_001225855.1\|2364539_2365316_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.30839e-153
NZ_CP020753.1\|WP_000135039.1\|2388269_2388524_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	1.23742e-52
NZ_CP020753.1\|WP_000332036.1\|2387139_2388270_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP020753.1\|WP_000301054.1\|2388577_2389228_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	3.98056e-158
NZ_CP020753.1\|WP_005046836.1\|2367533_2367692_-\|hypothetical-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	6.0899e-06
NZ_CP020753.1\|WP_000948723.1\|2390771_2392130_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP020753.1\|WP_001000362.1\|2395276_2396467_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0

>NZ_CP020753.1|WP_001075180.1|2384620_2386906_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPTIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP020753.1|WP_094081542.1|2382505_2383734_+|IS3-like-element-IS2-family-transposase
MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRLMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>NZ_CP020753.1|WP_072075175.1|2380786_2382442_-|autotransporter
MSGDSGGQSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAINNIANDGKGGAIYTINNDVYLSDDVFNNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYGGAIYTNSATAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSTAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDK
>NZ_CP020753.1|WP_072075176.1|2378842_2380777_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MMEITANVDTRSTTTEHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTFTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADIFPYASSLWVGDGATFVTGADQDIQSIDATSSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLADVTVNGDLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLFDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPEPDPTPDPDPTPDPDPTPDPAPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGRYHYTAAGQLAQQEDTSTVQLSGGLFSGRWGTDGEWMLGAVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEHEDGVDRYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVGVTPTLDLNYYHDPHATEIEEDGSTISDDAVKLRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP020753.1|WP_000990752.1|2377992_2378715_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNSFKLGPGVDVNYMLHTQNK
>NZ_CP020753.1|WP_001281242.1|2375218_2377846_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP020753.1|WP_001215763.1|2372761_2373385_-|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSRLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGSGKNGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP020753.1|WP_000747032.1|2369244_2370413_-|IS3-like-element-IS911-family-transposase
MKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEIFKKGYRALDVRLPEQFSIIGKLRAHYPVVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
>NZ_CP020753.1|WP_005046836.1|2367533_2367692_-|hypothetical-protein
MTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVG
>NZ_CP020753.1|WP_001225855.1|2364539_2365316_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP020753.1|WP_000332036.1|2387139_2388270_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NZ_CP020753.1|WP_000135039.1|2388269_2388524_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEL
>NZ_CP020753.1|WP_000301054.1|2388577_2389228_-|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP020753.1|WP_128882039.1|2389690_2390767_-|glycerophosphodiester-phosphodiesterase
MKLKLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGHLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP020753.1|WP_000948723.1|2390771_2392130_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP020753.1|WP_000857257.1|2392402_2394031_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP020753.1|WP_001209895.1|2394020_2395280_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRATWLSSPEVPVWPLPAKKICVVGISGLIDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP020753.1|WP_001000362.1|2395276_2396467_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP020753.1|WP_000140529.1|2396659_2397610_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFIFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRPMRYATAAMQSHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDHDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLVGLQQGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>NZ_CP020753.1|WP_128882040.1|2397650_2398121_-|aldolase
MSNPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNVGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY

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Crispr_ID: NZ_CP020753_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP020753_3

3212828-3212929

Orphan

Consensus_repeat	Method
TACAAAACACAACAACATCAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP020753_3

>merge|NZ_CP020753|3|3212828-3212929|CRISPRCasFinder
TACAAAACACAACAACATCAACAAATTAAACACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCATCAGGTACAAAACACAACAACATCAACAA

>NZ_CP020753|3|3|3212828-3212929|CRISPRCasFinder
TACAAAACACAACAACATCAACAA	ATTAAACACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCATCAGG
TACAAAACACAACAACATCAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP020753.1\|WP_128882038.1\|3210897_3211794_-\|DNA-binding-transcriptional-regulator-YhaJ	unknown	unknown	gnl\|CDD\|176122
NZ_CP020753.1\|WP_000719990.1\|3217378_3217768_-\|enamine/imine-deaminase	unknown	unknown	gnl\|CDD\|105214
NZ_CP020753.1\|WP_000107721.1\|3221238_3222570_-\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
NZ_CP020753.1\|WP_000145836.1\|3224807_3225152_+\|DNA-binding-transcriptional-activator-TdcR	unknown	unknown	gnl\|CDD\|236909
NZ_CP020753.1\|WP_001166768.1\|3206568_3206952_+\|EnvZ/OmpR-regulon-moderator-MzrA	unknown	unknown	gnl\|CDD\|236728
NZ_CP020753.1\|WP_011587270.1\|3208587_3208974_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP020753.1\|WP_005050924.1\|3220004_3221213_-\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484
NZ_CP020753.1\|WP_000531201.1\|3209043_3210030_+\|glutathionyl-hydroquinone-reductase-YqjG	unknown	unknown	gnl\|CDD\|223512
NZ_CP020753.1\|WP_000633582.1\|3211898_3212600_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP020753.1\|WP_000548347.1\|3222591_3223581_-\|bifunctional-threonine-ammonia-lyase/L-serine-ammonia-lyase-TdcB	unknown	unknown	gnl\|CDD\|236317
NZ_CP020753.1\|WP_000104211.1\|3223679_3224618_-\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
NZ_CP020753.1\|WP_000401579.1\|3214336_3215668_-\|HAAAP-family-serine/threonine-permease	unknown	unknown	gnl\|CDD\|273283
NZ_CP020753.1\|WP_000096086.1\|3208192_3208492_+\|YqjK-like-family-protein	unknown	unknown	gnl\|CDD\|372871
NZ_CP020753.1\|WP_005050947.1\|3210322_3210691_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
NZ_CP020753.1\|WP_005050939.1\|3212622_3212787_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP020753.1\|WP_000460517.1\|3212998_3214309_-\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
NZ_CP020753.1\|WP_000785722.1\|3207798_3208203_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|227681
NZ_CP020753.1\|WP_000622110.1\|3215942_3217307_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
NZ_CP020753.1\|WP_128882037.1\|3217781_3219971_-\|2-ketobutyrate-formate-lyase/pyruvate-formate-lyase	unknown	unknown	gnl\|CDD\|153087
NZ_CP020753.1\|WP_000031415.1\|3207490_3207796_+\|DUF883-domain-containing-protein	unknown	unknown	gnl\|CDD\|226941

Protein	Function_ID	Function_description	E-value
NZ_CP020753.1\|WP_128882038.1\|3210897_3211794_-\|DNA-binding-transcriptional-regulator-YhaJ	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.94639e-50
NZ_CP020753.1\|WP_000719990.1\|3217378_3217768_-\|enamine/imine-deaminase	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
NZ_CP020753.1\|WP_000107721.1\|3221238_3222570_-\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
NZ_CP020753.1\|WP_000145836.1\|3224807_3225152_+\|DNA-binding-transcriptional-activator-TdcR	gnl\|CDD\|236909	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional.	1.4676e-66
NZ_CP020753.1\|WP_001166768.1\|3206568_3206952_+\|EnvZ/OmpR-regulon-moderator-MzrA	gnl\|CDD\|236728	PRK10629, PRK10629, EnvZ/OmpR regulon moderator MzrA.	1.13391e-71
NZ_CP020753.1\|WP_011587270.1\|3208587_3208974_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	5.81384e-17
NZ_CP020753.1\|WP_005050924.1\|3220004_3221213_-\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
NZ_CP020753.1\|WP_000531201.1\|3209043_3210030_+\|glutathionyl-hydroquinone-reductase-YqjG	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP020753.1\|WP_000633582.1\|3211898_3212600_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.70011e-68
NZ_CP020753.1\|WP_000548347.1\|3222591_3223581_-\|bifunctional-threonine-ammonia-lyase/L-serine-ammonia-lyase-TdcB	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
NZ_CP020753.1\|WP_000104211.1\|3223679_3224618_-\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
NZ_CP020753.1\|WP_000401579.1\|3214336_3215668_-\|HAAAP-family-serine/threonine-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	1.58965e-166
NZ_CP020753.1\|WP_000096086.1\|3208192_3208492_+\|YqjK-like-family-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.11451e-20
NZ_CP020753.1\|WP_005050947.1\|3210322_3210691_+\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	2.32064e-42
NZ_CP020753.1\|WP_000460517.1\|3212998_3214309_-\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
NZ_CP020753.1\|WP_000785722.1\|3207798_3208203_+\|phage-holin-family-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60
NZ_CP020753.1\|WP_000622110.1\|3215942_3217307_-\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
NZ_CP020753.1\|WP_128882037.1\|3217781_3219971_-\|2-ketobutyrate-formate-lyase/pyruvate-formate-lyase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NZ_CP020753.1\|WP_000031415.1\|3207490_3207796_+\|DUF883-domain-containing-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	1.46625e-41

>NZ_CP020753.1|WP_005050939.1|3212622_3212787_+|hypothetical-protein
MSKKSTKKRQPAKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>NZ_CP020753.1|WP_000633582.1|3211898_3212600_+|pirin-family-protein
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDTCPQRENPLIQKLALNMDKQQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>NZ_CP020753.1|WP_128882038.1|3210897_3211794_-|DNA-binding-transcriptional-regulator-YhaJ
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERSVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFAGK
>NZ_CP020753.1|WP_005050947.1|3210322_3210691_+|DUF805-domain-containing-protein
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTIIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEQE
>NZ_CP020753.1|WP_000531201.1|3209043_3210030_+|glutathionyl-hydroquinone-reductase-YqjG
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>NZ_CP020753.1|WP_011587270.1|3208587_3208974_+|DoxX-family-protein
MILSIDSNDANSAPLHKKTISSLSGAVESMMKKLEDVGVLVAHILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
>NZ_CP020753.1|WP_000096086.1|3208192_3208492_+|YqjK-like-family-protein
MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>NZ_CP020753.1|WP_000785722.1|3207798_3208203_+|phage-holin-family-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ
>NZ_CP020753.1|WP_000031415.1|3207490_3207796_+|DUF883-domain-containing-protein
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR
>NZ_CP020753.1|WP_001166768.1|3206568_3206952_+|EnvZ/OmpR-regulon-moderator-MzrA
MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
>NZ_CP020753.1|WP_000460517.1|3212998_3214309_-|serine-dehydratase-subunit-alpha-family-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTHQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>NZ_CP020753.1|WP_000401579.1|3214336_3215668_-|HAAAP-family-serine/threonine-permease
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSLFLAFS
>NZ_CP020753.1|WP_000622110.1|3215942_3217307_-|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPCRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>NZ_CP020753.1|WP_000719990.1|3217378_3217768_-|enamine/imine-deaminase
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>NZ_CP020753.1|WP_128882037.1|3217781_3219971_-|2-ketobutyrate-formate-lyase/pyruvate-formate-lyase
MKVDIDTSDKLYADAWLGFKGTDWKSEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLERTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>NZ_CP020753.1|WP_005050924.1|3220004_3221213_-|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSFGERIVSSENAHVICVVIPTNEEKMIALDAIHLGKVNAPAEFA
>NZ_CP020753.1|WP_000107721.1|3221238_3222570_-|threonine/serine-transporter-TdcC
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTLSMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>NZ_CP020753.1|WP_000548347.1|3222591_3223581_-|bifunctional-threonine-ammonia-lyase/L-serine-ammonia-lyase-TdcB
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>NZ_CP020753.1|WP_000104211.1|3223679_3224618_-|transcriptional-regulator-TdcA
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG
>NZ_CP020753.1|WP_000145836.1|3224807_3225152_+|DNA-binding-transcriptional-activator-TdcR
MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP020753_1	1.1\|64175\|54\|NZ_CP020753\|CRISPRCasFinder	64175-64228	54	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165411-165464	1	0.981
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NZ_CP020753_1	1.1\|64175\|54\|NZ_CP020753\|CRISPRCasFinder	64175-64228	54	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	72431-72484	12	0.778
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NZ_CP020753_2	2.1\|2386996\|49\|NZ_CP020753\|CRISPRCasFinder	2386996-2387044	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 1.1|64175|54|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

gaatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	CRISPR spacer
caatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	Protospacer
 *****************************************************

2. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

3. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

4. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

5. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

6. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

7. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

8. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

9. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

10. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

11. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

12. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

13. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

14. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

15. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

16. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

17. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

18. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

19. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

20. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

21. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

22. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

23. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

24. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

25. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

26. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

27. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

28. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

29. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

30. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

31. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

32. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

33. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

34. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

35. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

36. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

37. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

38. spacer 1.1|64175|54|NZ_CP020753|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

gaatgccggatgcgctttgcttatccggcctacaaaatcgc-----agcgtgtaggcca	CRISPR spacer
tactgccggatgcgctttgcttatccggcctacaataccgcgaattaatttgta-----	Protospacer
 * ******************************** *.***     *.. ****

39. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

40. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

41. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

42. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

43. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

44. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

45. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

46. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

47. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

48. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

49. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

50. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

51. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

52. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

53. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

54. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

55. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

56. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

57. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

58. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

59. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

60. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

61. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

62. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

63. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

64. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

65. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

66. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

67. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

68. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

69. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

70. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

71. spacer 2.1|2386996|49|NZ_CP020753|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

171896 : 251870

Salmonella_phage(19.05%)

plate,protease,coat,tRNA,terminase,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000753940.1\|171896_173321_+\|protease	serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	6.5e-27	29.2
WP_000272188.1\|174720_175107_-	DUF3461 family protein	NA	NA	NA	NA
WP_001186650.1\|175420_176245_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_001094599.1\|176275_178948_-	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
WP_001018194.1\|179009_179804_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_000246888.1\|180171_180897_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_000818114.1\|181154_182006_+	elongation factor Ts	NA	NA	NA	NA
WP_000224573.1\|182152_182878_+	UMP kinase	NA	NA	NA	NA
WP_000622418.1\|183169_183727_+	ribosome recycling factor	NA	NA	NA	NA
WP_000811938.1\|183818_185015_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_001295562.1\|185203_185962_+	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	R9W0U9	Flavobacterium_phage	7.7e-27	44.4
WP_000922446.1\|185974_186832_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_005059807.1\|186843_188196_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240908.1\|188225_190658_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|190779_191265_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139283.1\|191268_192294_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|192398_192854_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|192857_193646_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000132065.1\|193645_194794_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569431.1\|194790_195387_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.8e-26	40.0
WP_001294738.1\|195423_198906_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	1.7e-209	36.9
WP_000055741.1\|198918_199878_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_128881983.1\|199976_202118_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|202174_202564_+	VOC family protein	NA	NA	NA	NA
WP_000176576.1\|202628_203927_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062312.1\|203975_204236_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|204222_204423_-	YaeP family protein	NA	NA	NA	NA
WP_001185290.1\|204588_205134_+	YaeQ family protein	NA	NA	NA	NA
WP_000635538.1\|205130_205553_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239155.1\|205566_206277_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_005053355.1\|206431_207256_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_001260712.1\|207308_209027_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094030.1\|209137_209845_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202325.1\|209841_210246_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874221.1\|210363_211179_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294596.1\|211218_211872_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000593997.1\|211864_212896_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001140187.1\|213083_213659_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997035.1\|219417_220221_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	1.6e-38	36.2
WP_000483770.1\|220259_221606_-\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA
WP_000648578.1\|221655_222570_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|222810_223611_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000211683.1\|223688_224459_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644678.1\|224506_225865_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	3.8e-08	35.1
WP_001052754.1\|225936_226692_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_005060310.1\|226725_227448_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|227444_227912_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001366128.1\|227976_228708_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	7.6e-40	38.6
WP_000402248.1\|229047_230094_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_128882086.1\|231086_232970_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_128882085.1\|232985_233480_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000343116.1\|236590_236878_-	hypothetical protein	A0A1P8DTP0	Salmonella_phage	1.8e-29	60.0
WP_000747032.1\|237961_239130_-\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_071994008.1\|239184_240243_+\|terminase	terminase	I1TEI5	Salmonella_phage	9.2e-212	99.7
WP_005124985.1\|242422_243334_+	scaffold protein	A0A2D1GLN7	Escherichia_phage	2.4e-160	99.3
WP_001196950.1\|243333_244629_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	1.5e-240	98.4
WP_005053303.1\|244673_244904_+	hypothetical protein	A0A2D1GLK1	Escherichia_phage	1.2e-23	69.3
WP_005124991.1\|244881_245382_+	DNA recombination protein RmuC	G8EYJ2	Enterobacteria_phage	3.2e-90	98.8
WP_005124992.1\|245381_246800_+	packaged DNA stabilization protein gp10	Q9AYZ4	Salmonella_phage	4.3e-273	98.9
WP_000785540.1\|246799_247648_+	Packaged DNA stabilization protein gp26	Q716G6	Shigella_phage	2.1e-102	98.6
WP_005124997.1\|247647_248103_+	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	2.6e-86	98.7
WP_000964877.1\|248105_248798_+	DNA transfer protein	G5DA80	Enterobacteria_phage	2.1e-111	99.6
WP_005124999.1\|250139_251870_+	lytic transglycosylase domain-containing protein	A0A088CQ71	Enterobacteria_phage	1.7e-279	97.7

DBSCAN-SWA_2

263952 : 328181

Enterobacteria_phage(30.0%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086020932.1\|263952_265109_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.0e-67	44.7
WP_001295337.1\|268874_269849_+	porphobilinogen synthase	NA	NA	NA	NA
WP_000004031.1\|269954_270806_-	taurine dioxygenase	NA	NA	NA	NA
WP_000114607.1\|270802_271630_-	taurine ABC transporter permease TauC	NA	NA	NA	NA
WP_000939367.1\|271626_272394_-	taurine ABC transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	4.3e-25	39.8
WP_045177322.1\|272406_273333_-	taurine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_077696319.1\|273599_273794_-	regulator	NA	NA	NA	NA
WP_000003122.1\|274702_275371_+	hypothetical protein	NA	NA	NA	NA
WP_000370403.1\|275613_276309_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023933.1\|276301_277729_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102097.1\|277739_278459_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000667623.1\|280241_280628_+	hypothetical protein	NA	NA	NA	NA
WP_000011499.1\|280652_282866_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_005053237.1\|283355_283763_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_000568702.1\|283759_286237_+	RHS repeat protein	NA	NA	NA	NA
WP_005053234.1\|286233_287223_+	RHS repeat-associated core domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	6.5e-26	52.7
WP_128567422.1\|287322_287526_+	hypothetical protein	NA	NA	NA	NA
WP_032320155.1\|287627_287864_+	hypothetical protein	NA	NA	NA	NA
WP_001139559.1\|288271_289042_-	2-oxoglutaramate amidase	NA	NA	NA	NA
WP_000532697.1\|289195_289669_+	C-lysozyme inhibitor	NA	NA	NA	NA
WP_025746263.1\|289711_292156_-	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000284050.1\|292395_292974_+	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
WP_000333379.1\|293179_293947_+	class II glutamine amidotransferase	NA	NA	NA	NA
WP_001225676.1\|293917_294658_-	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000006251.1\|295738_296236_+\|transposase	REP-associated tyrosine transposase RayT	NA	NA	NA	NA
WP_005060461.1\|296452_298192_-	flagellar type III secretion system protein FlhA	NA	NA	NA	NA
WP_000207561.1\|298136_298922_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_128882050.1\|298992_300048_+	DNA polymerase IV	NA	NA	NA	NA
WP_000554759.1\|300099_300393_+	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA
WP_001263491.1\|300395_300794_+	type II toxin-antitoxin system mRNA interferase toxin YafO	NA	NA	NA	NA
WP_001059861.1\|300803_301256_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005060486.1\|301501_302545_+	RNA ligase RtcB family protein	A0A059VHB8	Mycobacterium_phage	6.8e-26	30.0
WP_001293009.1\|303277_304735_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_001291990.1\|304996_305455_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_000189558.1\|305546_306791_+	esterase FrsA	NA	NA	NA	NA
WP_000174678.1\|306848_307250_+	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000749864.1\|307288_308344_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	3.5e-118	60.9
WP_001285281.1\|309407_310511_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.1e-61	40.1
WP_000893267.1\|310522_311776_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.2
WP_094099483.1\|312992_314149_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.4e-67	44.7
WP_171763968.1\|314697_315138_+\|tail	tail fiber assembly protein	M1FJ98	Enterobacteria_phage	2.5e-78	99.3
WP_000217914.1\|315371_315677_-	hypothetical protein	M1FPE6	Enterobacteria_phage	2.8e-52	100.0
WP_000703663.1\|316894_317815_-	glycosyltransferase family 2 protein	M1FQW5	Enterobacteria_phage	6.2e-172	99.7
WP_000915849.1\|317811_318174_-	GtrA family protein	U5P0S6	Shigella_phage	1.1e-58	99.2
WP_094099483.1\|318837_319994_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.4e-67	44.7
WP_000563002.1\|321349_321709_+	hypothetical protein	U5P092	Shigella_phage	1.7e-53	99.0
WP_000206732.1\|321708_322014_+	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
WP_134797288.1\|323022_324166_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.5e-63	43.7
WP_171763969.1\|325006_326179_+	acyltransferase	A0A088CPR9	Enterobacteria_phage	2.5e-210	99.2
WP_005060548.1\|326232_326856_-	hypothetical protein	A0A088CQ58	Enterobacteria_phage	2.9e-72	76.3
WP_171763936.1\|326982_328181_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.4e-67	44.7

DBSCAN-SWA_3

656000 : 825475

162

Enterobacteria_phage(24.44%)

lysis,head,integrase,capsid,holin,tRNA,terminase,tail,transposase

attL 706695:706754|attR 732536:733866

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000162739.1\|656000_657425_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_001018040.1\|657577_658618_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	4.1e-47	46.6
WP_000084469.1\|658614_659082_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_001278605.1\|659171_660050_+	CNNM family magnesium/cobalt transport protein CorC	NA	NA	NA	NA
WP_000853054.1\|660074_661613_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_001177084.1\|662009_662918_+	glutamate/aspartate ABC transporter substrate-binding protein GltI	NA	NA	NA	NA
WP_000020953.1\|663087_663828_+	glutamate/aspartate ABC transporter permease GltJ	NA	NA	NA	NA
WP_000272830.1\|663827_664502_+	glutamate/aspartate ABC transporter permease GltK	NA	NA	NA	NA
WP_000631382.1\|664501_665227_+	glutamate/aspartate ABC transporter ATP binding protein GltL	G9BWD6	Planktothrix_phage	1.7e-31	38.6
WP_001207526.1\|665344_666280_+	pyrimidine-specific ribonucleoside hydrolase RihA	NA	NA	NA	NA
WP_005049464.1\|668093_669545_-	co-chaperone DjlC	NA	NA	NA	NA
WP_001030938.1\|669541_670249_-	DUF1266 domain-containing protein	NA	NA	NA	NA
WP_001035656.1\|670350_670905_+	sel1 repeat family protein	NA	NA	NA	NA
WP_005125510.1\|670914_672342_-	J domain-containing protein	NA	NA	NA	NA
WP_128881951.1\|672338_673046_-	DUF1266 domain-containing protein	NA	NA	NA	NA
WP_000578172.1\|673209_674187_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_001044870.1\|674256_674739_-	zinc ribbon-containing protein	NA	NA	NA	NA
WP_001157892.1\|674973_677556_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.4e-184	42.3
WP_001269672.1\|677570_678152_+	LPS assembly lipoprotein LptE	NA	NA	NA	NA
WP_000620544.1\|678151_679183_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_000838889.1\|679184_679826_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_001241888.1\|679849_680461_+	adenosylcobalamin/alpha-ribazole phosphatase	NA	NA	NA	NA
WP_001161664.1\|680720_681038_+	ribosome silencing factor	NA	NA	NA	NA
WP_000776104.1\|681041_681509_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_000776198.1\|681539_683441_+	peptidoglycan DD-transpeptidase MrdA	NA	NA	NA	NA
WP_000131719.1\|683443_684556_+	peptidoglycan glycosyltransferase MrdB	NA	NA	NA	NA
WP_001231406.1\|684566_685655_+	endolytic peptidoglycan transglycosylase RlpA	F5B3X9	Synechococcus_phage	3.6e-09	53.2
WP_001092085.1\|685793_687005_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	7.5e-101	47.2
WP_000850550.1\|687115_687379_+	YbeD family protein	NA	NA	NA	NA
WP_000284045.1\|687479_688121_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_000378035.1\|688379_689333_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_000042632.1\|689541_690507_+	lipoyl synthase	NA	NA	NA	NA
WP_000503931.1\|690607_690811_-	twin-arginine translocase subunit TatE	NA	NA	NA	NA
WP_128881952.1\|690939_691728_-	deaminated glutathione amidase	NA	NA	NA	NA
WP_000939741.1\|691820_692204_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	6.8e-24	53.6
WP_000034825.1\|692257_692467_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	2.7e-22	78.1
WP_005049488.1\|692641_693202_-	lipid IV(A) palmitoyltransferase PagP	NA	NA	NA	NA
WP_000955063.1\|693790_695176_+	anaerobic C4-dicarboxylate transporter DcuC	NA	NA	NA	NA
WP_000833599.1\|695895_696405_-	DNA-binding protein	NA	NA	NA	NA
WP_077696331.1\|696567_696813_+	helix-turn-helix domain-containing protein	A0A2I7S995	Vibrio_phage	6.1e-18	63.2
WP_134796890.1\|698483_699639_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_011069283.1\|699651_699927_+	hypothetical protein	NA	NA	NA	NA
WP_000627469.1\|699923_700865_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	7.8e-154	85.9
WP_005060669.1\|701009_701366_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	4.7e-51	87.4
WP_094099483.1\|701877_703033_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.4e-67	44.7
WP_000184977.1\|703860_704604_-\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	5.3e-89	84.4
WP_000113500.1\|704494_705961_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	9.6e-260	91.0
WP_005020049.1\|705960_706194_-	hypothetical protein	A0A077KAW0	Edwardsiella_phage	6.2e-20	65.8
WP_005098291.1\|706181_706721_-	hypothetical protein	A0A077KAW0	Edwardsiella_phage	6.6e-49	61.4
706695:706754	attL	NA	NA	NA	NA
WP_000204761.1\|708009_708693_-\|terminase	PBSX family phage terminase large subunit	K4NXU1	Acinetobacter_phage	7.0e-96	73.4
WP_001108106.1\|708643_709408_-	hypothetical protein	G8C7P2	Escherichia_phage	7.0e-12	55.4
WP_011069285.1\|709602_710115_+	VTT domain-containing protein	NA	NA	NA	NA
WP_128567431.1\|710247_710439_-	hypothetical protein	Q76H62	Enterobacteria_phage	1.3e-28	98.4
WP_000747032.1\|710521_711689_+\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_134797294.1\|711782_712938_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.4e-66	44.4
WP_128882095.1\|713039_713921_+\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	1.6e-161	99.3
WP_001091541.1\|714055_715339_+	putative acyl-CoA thioester hydrolase	NA	NA	NA	NA
WP_000593940.1\|715479_717660_-	hydratase	NA	NA	NA	NA
WP_001036463.1\|717842_719276_-	anion permease	NA	NA	NA	NA
WP_105078295.1\|719351_720404_-	4-oxalomesaconate tautomerase	NA	NA	NA	NA
WP_000815445.1\|721581_722577_-	6-phosphogluconolactonase	NA	NA	NA	NA
WP_005061694.1\|722836_722968_-	hypothetical protein	A0A0C4UR34	Shigella_phage	2.6e-07	86.7
WP_011110560.1\|723458_725285_+	invasion protein	NA	NA	NA	NA
WP_001039888.1\|725285_725465_-	hypothetical protein	NA	NA	NA	NA
WP_005061679.1\|725464_726082_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	5.7e-81	76.5
WP_134798247.1\|728316_729446_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.5e-60	42.3
WP_001069001.1\|729661_729943_-	hypothetical protein	A0A0U2SHB5	Escherichia_phage	2.0e-09	55.8
WP_000935590.1\|729959_730808_-	Rha family phage regulatory protein	A0A0P0ZE80	Stx2-converting_phage	9.7e-55	57.0
WP_001005968.1\|732825_733029_-	hypothetical protein	I6PDF6	Cronobacter_phage	1.0e-10	82.5
WP_001091985.1\|733030_733186_-	DUF1391 family protein	M4QQ57	Salicola_phage	5.2e-07	53.2
WP_128882117.1\|733388_733796_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.2e-28	49.6
WP_000912291.1\|733872_734100_+	transcriptional regulator	NA	NA	NA	NA
732536:733866	attR	NA	NA	NA	NA
WP_000702036.1\|734083_734506_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	3.8e-68	93.6
WP_001118167.1\|736134_736557_+	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	5.9e-53	76.6
WP_005048249.1\|736614_736971_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	5.1e-58	97.5
WP_012421537.1\|737139_737805_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_000882657.1\|737975_738188_+	type I toxin-antitoxin system Hok family toxin	A0A0P0ZAX5	Stx2-converting_phage	4.0e-26	90.0
WP_000687442.1\|738437_738725_+	hypothetical protein	NA	NA	NA	NA
WP_094190774.1\|739175_740305_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.0e-59	41.9
WP_000228005.1\|740602_740893_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	9.6e-47	88.5
WP_000747032.1\|741076_742244_+\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_000482655.1\|742273_742696_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.4e-43	63.4
WP_134800205.1\|744008_745138_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.6e-60	42.3
WP_032325845.1\|745413_747255_+	toprim domain-containing protein	B0FEC9	Escherichia_phage	0.0e+00	98.2
WP_000747032.1\|747311_748479_+\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_075332552.1\|748747_749572_+	hypothetical protein	A0A0P0ZC72	Stx2-converting_phage	3.3e-156	99.3
WP_005061104.1\|749646_749925_+	hypothetical protein	Q9ZWY1	Enterobacteria_phage	5.4e-47	96.7
WP_000814621.1\|749921_750332_+	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	8.0e-71	98.5
WP_024260406.1\|750328_750505_+	NinE family protein	K7PHE6	Enterobacteria_phage	7.9e-28	98.3
WP_000147081.1\|750546_750855_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	3.5e-47	98.0
WP_001202685.1\|750844_751108_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.9e-42	93.1
WP_005061096.1\|751039_751546_+	ash family protein	S5MQL6	Escherichia_phage	2.7e-44	80.5
WP_077696494.1\|751561_752056_+	Rha family transcriptional regulator	S5MQL6	Escherichia_phage	5.5e-58	71.2
WP_000618004.1\|752052_752286_+	hypothetical protein	A0A1C9II64	Salmonella_phage	5.1e-14	51.4
WP_001247840.1\|752272_753181_+	hypothetical protein	Q8W642	Enterobacteria_phage	1.3e-60	96.6
WP_000988183.1\|753191_754070_+	ATP-binding protein	Q8W641	Enterobacteria_phage	3.0e-139	95.6
WP_000211324.1\|754066_755458_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	3.6e-256	95.7
WP_001064799.1\|755454_755712_+	hypothetical protein	Q8W639	Enterobacteria_phage	1.1e-33	93.8
WP_000111769.1\|755806_756007_+	protein ninH	A0A088CC23	Shigella_phage	1.1e-20	74.2
WP_001204832.1\|755999_756380_+	antitermination protein	A0A088CD47	Shigella_phage	8.2e-62	87.9
WP_000839566.1\|757182_757398_+\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	2.2e-32	94.4
WP_005083349.1\|757401_758031_+	hypothetical protein	Q08JA0	Stx2-converting_phage	4.7e-30	57.6
WP_001274722.1\|758096_758630_+	lysozyme	K7PLY1	Enterobacteria_phage	1.6e-100	98.3
WP_000092287.1\|758626_759094_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	6.7e-74	94.8
WP_094105672.1\|759519_760676_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_001346234.1\|760851_761160_+	hypothetical protein	Q9B021	Phage_GMSE-1	2.9e-09	77.5
WP_001205133.1\|761467_761644_-	hypothetical protein	NA	NA	NA	NA
WP_005107083.1\|762040_762253_+	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	6.2e-11	52.9
WP_000747032.1\|762604_763773_-\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_001026848.1\|766349_768278_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.8e-258	66.0
WP_000259004.1\|768261_768465_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	8.6e-10	57.4
WP_075332558.1\|770044_771550_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.0e-99	53.2
WP_000256830.1\|771586_771934_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.4e-21	55.9
WP_000522637.1\|771991_773020_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	4.9e-117	63.0
WP_000201488.1\|773071_773458_+	DNA-packaging protein FI	NA	NA	NA	NA
WP_000348593.1\|773469_773847_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.5e-31	57.3
WP_000677140.1\|773833_774418_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	6.0e-88	87.6
WP_001079406.1\|774414_774816_+\|tail	tail protein	A0A291AWY2	Escherichia_phage	1.6e-71	97.7
WP_000211126.1\|774826_775567_+	Ig-like domain-containing protein	A5LH35	Enterobacteria_phage	1.5e-128	96.7
WP_000478927.1\|775625_776012_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	1.4e-61	92.2
WP_001161004.1\|776020_776350_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-55	99.1
WP_128881990.1\|776321_779363_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	86.4
WP_000447264.1\|779362_779692_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.4e-57	97.2
WP_001152490.1\|779691_780390_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.4e-121	89.7
WP_000194737.1\|780394_781138_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.8e-145	94.7
WP_000090877.1\|781074_781677_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-88	85.6
WP_000515521.1\|781737_785217_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	87.3
WP_001230368.1\|785284_785884_+	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	6.1e-104	93.5
WP_000930145.1\|787309_787933_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	5.1e-77	75.9
WP_000801162.1\|788112_789876_-	invasion plasmid antigen	NA	NA	NA	NA
WP_000767391.1\|790458_790935_-	kinase inhibitor	NA	NA	NA	NA
WP_024260402.1\|790993_792283_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	6.5e-18	28.6
WP_000951226.1\|792369_793410_+	biotin synthase BioB	NA	NA	NA	NA
WP_000118810.1\|793406_794561_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_000246759.1\|794547_795303_+	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA
WP_000044868.1\|795295_795973_+	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
WP_000042516.1\|796551_798573_+	excinuclease ABC subunit B	NA	NA	NA	NA
WP_005048534.1\|798764_799673_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	1.4e-27	31.1
WP_000168192.1\|800069_801059_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_000084630.1\|801080_801593_+	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA
WP_000080885.1\|801595_802081_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_000598624.1\|802073_802319_+	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
WP_000852286.1\|802320_802773_+	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
WP_000373624.1\|802909_803614_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_000446914.1\|803818_804532_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_000045466.1\|804567_805524_-	UPF0104 family protein	NA	NA	NA	NA
WP_000650362.1\|805523_806765_-	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_001113348.1\|806761_807523_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000871982.1\|807655_808066_+	YbhQ family protein	NA	NA	NA	NA
WP_000469031.1\|808027_809134_-	ABC transporter permease	NA	NA	NA	NA
WP_000070107.1\|809144_810278_-	ABC transporter permease	NA	NA	NA	NA
WP_000996107.1\|810270_812007_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.3e-18	29.8
WP_000743444.1\|811999_812995_-	secretion protein HlyD	NA	NA	NA	NA
WP_001296991.1\|812997_813669_-	DNA-binding transcriptional regulator CecR	NA	NA	NA	NA
WP_001145124.1\|815291_815774_-	N-glycosidase YbiA	A0A0H3TLU0	Faustovirus	1.3e-35	52.0
WP_005094896.1\|815893_818044_+	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	3.1e-41	25.6
WP_000386531.1\|818071_819034_+	DNA-binding protein YbiB	NA	NA	NA	NA
WP_000443521.1\|819174_820260_+	hydroxycarboxylate dehydrogenase HcXB	NA	NA	NA	NA
WP_000849301.1\|820488_820749_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000135439.1\|821013_821280_-	C4-type zinc finger protein YbiI	E5G6L7	Salmonella_phage	4.0e-07	45.6
WP_000990151.1\|821353_822031_-	PKHD-type hydroxylase YbiX	Q5GQB0	Synechococcus_phage	3.4e-18	29.7
WP_005061315.1\|824128_825475_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

911750 : 977148

Bacillus_phage(22.22%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000520781.1\|911750_912071_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000934033.1\|912101_914378_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.3e-166	42.5
WP_001040187.1\|915061_915280_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241678.1\|915564_916269_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001202220.1\|916310_918032_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	9.9e-22	25.4
WP_001043574.1\|918032_919799_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	4.6e-22	24.0
WP_000537402.1\|919921_920887_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.3
WP_000228473.1\|921430_921925_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_000077072.1\|922059_926088_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_001295343.1\|926242_926854_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000067746.1\|926864_928208_+	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	4.3e-81	41.0
WP_000886683.1\|928298_929591_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000213098.1\|932285_932903_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000534651.1\|932904_933696_+	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA
WP_000165870.1\|933731_934358_-	hydrolase	NA	NA	NA	NA
WP_000109301.1\|934672_935821_+	MFS transporter	NA	NA	NA	NA
WP_004967157.1\|936133_936808_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_005048975.1\|936804_937155_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.5e-27	68.7
WP_000638232.1\|938892_939081_+\|transposase	transposase domain-containing protein	A0A0P0ZEB3	Stx2-converting_phage	4.5e-05	61.8
WP_111779742.1\|940457_941102_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_134797296.1\|941555_942684_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.5e-60	42.3
WP_094105059.1\|942590_942917_+	hypothetical protein	NA	NA	NA	NA
WP_000111043.1\|943843_944584_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
WP_001292813.1\|944775_947058_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	4.9e-162	41.2
WP_000642544.1\|947112_947970_-	formate transporter FocA	NA	NA	NA	NA
WP_005107139.1\|948375_950136_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_000057161.1\|951090_952179_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.0e-80	46.5
WP_000445222.1\|952249_953533_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_005061315.1\|953658_955005_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_001295345.1\|955140_955905_+	metallopeptidase YcaL	NA	NA	NA	NA
WP_000125013.1\|956077_956761_+	(d)CMP kinase	NA	NA	NA	NA
WP_000140327.1\|956871_958545_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_000167336.1\|958704_958989_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_000551266.1\|961491_963240_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	3.3e-57	29.8
WP_000570540.1\|963236_964223_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_000056529.1\|964259_965492_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000350058.1\|965543_965726_+	protein YcaR	NA	NA	NA	NA
WP_000011599.1\|965722_966469_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000436922.1\|966622_967516_+	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_000899599.1\|967492_968272_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_005047510.1\|968407_969193_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288850.1\|969189_970512_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_001295931.1\|970492_971197_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_000572706.1\|971196_975657_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_005061315.1\|975801_977148_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1069629 : 1108092

Shigella_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_134796907.1\|1069629_1070817_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000124119.1\|1070816_1071182_-	hypothetical protein	NA	NA	NA	NA
WP_000154398.1\|1072002_1073130_+	iron uptake system protein EfeO	NA	NA	NA	NA
WP_001199452.1\|1073135_1074401_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_005047400.1\|1075008_1075797_+	phosphate starvation-inducible protein PhoH	R4II13	Cronobacter_phage	8.6e-90	75.7
WP_001061095.1\|1075846_1076260_-	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA
WP_000283673.1\|1080009_1080747_+	zinc-binding phosphatase	NA	NA	NA	NA
WP_001001917.1\|1080770_1081325_+	molecular chaperone YcdY	NA	NA	NA	NA
WP_001297187.1\|1081426_1081918_+	DUF1097 domain-containing protein	NA	NA	NA	NA
WP_001264088.1\|1082783_1083200_-	curli production assembly/transport protein CsgF	NA	NA	NA	NA
WP_000833287.1\|1083224_1083614_-	curli production assembly/transport protein CsgE	NA	NA	NA	NA
WP_000481500.1\|1083618_1084269_-	transcriptional regulator CsgD	NA	NA	NA	NA
WP_000791650.1\|1085020_1085476_+	curlin minor subunit CsgB	NA	NA	NA	NA
WP_001144017.1\|1086751_1087117_+	curlin major subunit CsgA	NA	NA	NA	NA
WP_000992821.1\|1087175_1087508_+	curli assembly protein CsgC	NA	NA	NA	NA
WP_000489563.1\|1087628_1087940_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_000857408.1\|1088034_1088568_+	O-acetyl-ADP-ribose deacetylase	Q71G61	Red_sea_bream_iridovirus	7.8e-26	40.2
WP_011069326.1\|1088509_1089991_+	cardiolipin synthase ClsC	NA	NA	NA	NA
WP_001070350.1\|1089998_1091156_-	glucans biosynthesis protein MdoC	NA	NA	NA	NA
WP_011069327.1\|1091549_1093085_+	glucans biosynthesis protein MdoG	NA	NA	NA	NA
WP_001295445.1\|1093077_1095621_+	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA
WP_134797300.1\|1096036_1097224_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000124119.1\|1097223_1097589_-	hypothetical protein	NA	NA	NA	NA
WP_000747032.1\|1098376_1099545_-\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_000818777.1\|1101898_1102144_+	hypothetical protein	NA	NA	NA	NA
WP_094105069.1\|1102205_1103403_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_094081542.1\|1103827_1105055_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_094188155.1\|1106936_1108092_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.1e-68	45.1

DBSCAN-SWA_6

1180978 : 1194442

uncultured_Caudovirales_phage(90.91%)

protease,head,integrase,terminase,portal,tail

attL 1171257:1171271|attR 1190310:1190324

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1171257:1171271	attL	NA	NA	NA	NA
WP_000085253.1\|1180978_1182208_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.1e-131	55.6
WP_000953271.1\|1182581_1182770_+	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	5.9e-13	64.2
WP_005048024.1\|1182827_1183574_+	hypothetical protein	A0A2H4JGN8	uncultured_Caudovirales_phage	8.1e-13	51.0
WP_000226783.1\|1183582_1183783_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_005005155.1\|1183772_1183994_+	hypothetical protein	NA	NA	NA	NA
WP_001204964.1\|1184208_1184442_+	hypothetical protein	NA	NA	NA	NA
WP_000770157.1\|1184447_1184747_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000761796.1\|1184743_1186492_+	DNA primase	Q7M2A8	Enterobacteria_phage	3.3e-89	39.5
WP_000557473.1\|1186780_1187059_+	hypothetical protein	NA	NA	NA	NA
WP_001294165.1\|1187055_1187361_+	hypothetical protein	NA	NA	NA	NA
WP_000126701.1\|1187370_1187532_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001132078.1\|1187673_1187898_+	hypothetical protein	NA	NA	NA	NA
WP_000504052.1\|1189395_1189968_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	6.1e-61	63.0
WP_000267597.1\|1189969_1191181_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	2.0e-186	78.2
1190310:1190324	attR	NA	NA	NA	NA
WP_001020662.1\|1191177_1191516_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.7e-31	52.7
WP_000134107.1\|1191512_1191809_+\|head,tail	phage head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	2.2e-30	62.2
WP_001145905.1\|1191808_1192249_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.5e-62	72.6
WP_000174068.1\|1192232_1192415_+	hypothetical protein	NA	NA	NA	NA
WP_029716858.1\|1192470_1192797_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	9.2e-46	79.6
WP_128881933.1\|1192780_1194442_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	4.9e-276	81.0

DBSCAN-SWA_7

1389245 : 1419751

Escherichia_phage(61.9%)

integrase,transposase

attL 1396723:1396782|attR 1414291:1415058

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005107451.1\|1389245_1390442_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000788996.1\|1392319_1393066_+	ATP-binding protein	V5UQI5	Shigella_phage	2.1e-122	89.2
WP_001118167.1\|1393080_1393503_+	DUF977 family protein	A0A2I6TCA7	Escherichia_phage	5.9e-53	76.6
WP_005048249.1\|1393560_1393917_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	5.1e-58	97.5
WP_000256998.1\|1394009_1394228_+	DUF4014 family protein	A0A1I9LJM2	Stx_converting_phage	1.2e-28	90.3
WP_001229298.1\|1394229_1394595_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	2.5e-68	99.2
WP_000208062.1\|1394591_1395257_+	hypothetical protein	A0A076G611	Escherichia_phage	6.1e-36	44.9
WP_000610655.1\|1395256_1395622_+	DUF551 domain-containing protein	Q08J61	Stx2-converting_phage	6.1e-30	53.7
WP_000018421.1\|1396019_1396232_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.1e-27	92.9
1396723:1396782	attL	NA	NA	NA	NA
WP_000940329.1\|1397568_1398168_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.4e-108	94.5
WP_000228038.1\|1398167_1398458_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.3e-47	89.6
WP_000640143.1\|1398454_1399009_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	3.7e-71	70.5
WP_005049799.1\|1399149_1399335_+	hypothetical protein	A0A291AWU3	Escherichia_phage	1.5e-05	63.4
WP_134797302.1\|1399396_1400552_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_045178261.1\|1400599_1401106_+	ORF6N domain-containing protein	A0A0N7C203	Escherichia_phage	1.9e-42	73.2
WP_128882120.1\|1401739_1403344_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_119173042.1\|1404227_1404437_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_011069357.1\|1406111_1406480_+	hypothetical protein	A0A0C4UQV0	Shigella_phage	2.6e-20	55.4
WP_064194761.1\|1408207_1408831_+	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	8.1e-83	79.7
WP_000968134.1\|1409031_1409889_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_001101728.1\|1409885_1410743_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000983722.1\|1410739_1411567_-	iron/manganese ABC transporter ATP-binding protein SitB	G9BWD6	Planktothrix_phage	3.8e-11	28.5
WP_000555620.1\|1411566_1412481_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_000443257.1\|1412942_1413548_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	1.9e-113	98.5
WP_005049823.1\|1414523_1414691_-	excisionase family protein	A0A0U2RY08	Escherichia_phage	1.3e-27	100.0
WP_000747032.1\|1417039_1418208_-\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
1414291:1415058	attR	NA	NA	NA	NA
WP_094190485.1\|1418595_1419751_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	6.8e-67	44.7

DBSCAN-SWA_8

1570490 : 1580944

Escherichia_phage(23.08%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000534858.1\|1570490_1570730_+	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_000323025.1\|1570729_1571017_+	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000813254.1\|1571088_1571244_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000980987.1\|1571461_1571713_+	hypothetical protein	NA	NA	NA	NA
WP_001265249.1\|1572059_1573109_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	3.2e-108	54.3
WP_000904111.1\|1573121_1573478_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	6.1e-35	62.7
WP_000762884.1\|1573492_1574314_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.6e-78	59.0
WP_045177689.1\|1574849_1575176_+	hypothetical protein	NA	NA	NA	NA
WP_000871291.1\|1575623_1575959_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_000874243.1\|1576218_1576407_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	7.2e-27	95.2
WP_001323614.1\|1576403_1576565_+	hypothetical protein	Q08JA2	Stx2-converting_phage	5.4e-15	91.3
WP_000372594.1\|1576714_1576894_+\|holin	class II holin family protein	A0A2R2Z340	Escherichia_phage	4.1e-24	91.5
WP_134797302.1\|1576918_1578075_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
WP_000527804.1\|1579244_1580705_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.1e-42	29.6
WP_000214712.1\|1580740_1580944_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2

DBSCAN-SWA_9

1794807 : 1827883

Shigella_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_134797556.1\|1794807_1796036_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_000027560.1\|1796194_1796713_+	L-methionine sulfoximine/L-methionine sulfone acetyltransferase	NA	NA	NA	NA
WP_001076516.1\|1796709_1797159_+	DMT family transporter	NA	NA	NA	NA
WP_000018633.1\|1797159_1797393_-	YdcY family protein	NA	NA	NA	NA
WP_000061178.1\|1797478_1797652_-	orphan toxin OrtT	NA	NA	NA	NA
WP_001303494.1\|1797846_1797942_+	stress response membrane protein YncL	NA	NA	NA	NA
WP_000867989.1\|1798343_1799153_-	CatB-related O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	5.9e-17	41.0
WP_001163923.1\|1799362_1800787_-	aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
WP_000555458.1\|1800808_1801603_-	ABC transporter permease	NA	NA	NA	NA
WP_005108792.1\|1802441_1803629_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_086020934.1\|1805710_1806866_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.4e-67	44.7
WP_000586723.1\|1807480_1808074_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_005047890.1\|1808070_1809063_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_000140884.1\|1810148_1810685_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_001296778.1\|1810747_1810972_-	YdcH family protein	NA	NA	NA	NA
WP_000375931.1\|1811111_1812767_-	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_000013771.1\|1812991_1814335_-	VOC family protein	NA	NA	NA	NA
WP_000414573.1\|1814551_1815475_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001098548.1\|1815512_1817153_-	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_094081542.1\|1818774_1820003_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_134797121.1\|1820069_1821226_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.0e-66	44.7
WP_023517637.1\|1821600_1821750_+	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_000731833.1\|1821821_1821995_-	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_000428998.1\|1822239_1822770_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
WP_000048653.1\|1822958_1823960_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_000115920.1\|1824001_1825441_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_000747032.1\|1826715_1827883_+\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0

DBSCAN-SWA_10

1855664 : 1964521

Enterobacteria_phage(28.89%)

tail,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094106059.1\|1855664_1856937_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.0e-177	99.0
WP_128882106.1\|1856912_1857335_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.2e-24	51.1
WP_000081423.1\|1857510_1858446_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.2e-144	97.3
WP_000123730.1\|1858574_1859942_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.2e-51	33.1
WP_000387377.1\|1860419_1861403_-	zinc transporter ZntB	NA	NA	NA	NA
WP_001046816.1\|1862910_1863474_-	DNA endonuclease SmrA	NA	NA	NA	NA
WP_011069405.1\|1863727_1865182_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_000957853.1\|1865686_1865875_+	hypothetical protein	NA	NA	NA	NA
WP_000587200.1\|1868023_1868671_-	HlyD family secretion protein	NA	NA	NA	NA
WP_000156575.1\|1868767_1869583_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000945011.1\|1870126_1870642_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.1e-24	42.8
WP_000611911.1\|1870836_1871589_+	fumarate/nitrate reduction transcriptional regulator Fnr	NA	NA	NA	NA
WP_001262123.1\|1871740_1872691_+	universal stress protein UspE	NA	NA	NA	NA
WP_000124119.1\|1874094_1874460_+	hypothetical protein	NA	NA	NA	NA
WP_000937573.1\|1874459_1875647_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000559908.1\|1876322_1877354_+	low conductance mechanosensitive channel YnaI	NA	NA	NA	NA
WP_000683016.1\|1877404_1879018_-	murein tripeptide ABC transporter substrate-binding protein MppA	NA	NA	NA	NA
WP_119164881.1\|1882898_1883321_+	exodeoxyribonuclease VIII	A0A088CD28	Shigella_phage	4.1e-22	47.6
WP_001277358.1\|1883298_1883571_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.0e-37	83.3
WP_128882124.1\|1883600_1884698_+	AAA family ATPase	I6PCV5	Cronobacter_phage	4.6e-182	83.8
WP_000276807.1\|1884748_1884937_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	8.8e-17	93.5
WP_134797305.1\|1885037_1886192_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.4e-66	44.4
WP_005127484.1\|1886309_1886591_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	9.8e-12	42.4
WP_000976476.1\|1888025_1888367_-	YebY family protein	NA	NA	NA	NA
WP_000168747.1\|1889255_1889630_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000916763.1\|1889768_1889999_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
WP_000944270.1\|1890780_1891443_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	3.5e-07	41.6
WP_000936980.1\|1891439_1893500_-	oligopeptidase B	NA	NA	NA	NA
WP_000024751.1\|1893709_1894369_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_005062375.1\|1894695_1895052_-	protein YebF	NA	NA	NA	NA
WP_000173488.1\|1895542_1896721_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_000800512.1\|1896776_1897418_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_001069467.1\|1897454_1899266_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_000301736.1\|1899500_1900976_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
WP_001056694.1\|1901313_1902183_+	DNA-binding transcriptional regulator HexR	NA	NA	NA	NA
WP_000044415.1\|1902310_1903753_+	pyruvate kinase	NA	NA	NA	NA
WP_000448385.1\|1903883_1904855_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_001184045.1\|1904974_1906297_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_001342995.1\|1906312_1907245_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_000202992.1\|1907323_1908079_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	3.8e-18	28.3
WP_000571468.1\|1908075_1908861_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_000568525.1\|1909007_1910018_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.8e-08	25.2
WP_000580324.1\|1910026_1910638_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_001386853.1\|1910776_1910842_-	hypothetical protein	NA	NA	NA	NA
WP_001024930.1\|1910911_1911514_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_000974712.1\|1911515_1912037_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907248.1\|1912071_1912812_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_032319954.1\|1912840_1913293_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001258670.1\|1913410_1915183_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891627.1\|1915492_1915747_+	isochorismatase family protein	NA	NA	NA	NA
WP_005049126.1\|1915938_1917135_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001210039.1\|1917863_1918112_+	DinI-like family protein	K7PLW4	Enterobacteria_phage	4.1e-38	98.8
WP_134800208.1\|1918710_1920462_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_134798388.1\|1920642_1921266_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	2.5e-76	74.9
WP_001230368.1\|1922691_1923291_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	6.1e-104	93.5
WP_000515521.1\|1923358_1926838_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	87.3
WP_000090877.1\|1926898_1927501_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-88	85.6
WP_000194737.1\|1927437_1928181_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	6.8e-145	94.7
WP_001152490.1\|1928185_1928884_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.4e-121	89.7
WP_000447264.1\|1928883_1929213_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.4e-57	97.2
WP_128881990.1\|1929212_1932254_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	86.4
WP_001161004.1\|1932225_1932555_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-55	99.1
WP_000478927.1\|1932563_1932950_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	1.4e-61	92.2
WP_000211126.1\|1933008_1933749_-	Ig-like domain-containing protein	A5LH35	Enterobacteria_phage	1.5e-128	96.7
WP_001079406.1\|1933759_1934161_-\|tail	tail protein	A0A291AWY2	Escherichia_phage	1.6e-71	97.7
WP_000677116.1\|1934157_1934748_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	7.4e-78	78.2
WP_000753026.1\|1934734_1935106_-\|tail	tail attachment protein	NA	NA	NA	NA
WP_001074423.1\|1935117_1935519_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	3.3e-37	66.2
WP_134797307.1\|1935782_1936979_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001064885.1\|1938164_1938854_-	antiterminator	I6PDF8	Cronobacter_phage	2.9e-57	49.4
WP_001215517.1\|1938850_1939210_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	8.3e-40	66.1
WP_000755956.1\|1941067_1941895_+	hypothetical protein	Q8W654	Enterobacteria_phage	2.3e-125	94.5
WP_001099210.1\|1941938_1942688_+	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	1.7e-135	96.0
WP_000586688.1\|1942684_1943254_+	hypothetical protein	A0A088C4R7	Shewanella_sp._phage	6.8e-28	39.4
WP_000457720.1\|1943377_1943620_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	3.1e-30	83.8
WP_001030131.1\|1943623_1943770_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	7.0e-22	93.8
WP_000528720.1\|1943778_1943976_+	excisionase family protein	Q8W657	Enterobacteria_phage	3.7e-26	98.2
WP_000747032.1\|1943950_1945119_-\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_000905997.1\|1945348_1945699_+	DUF72 domain-containing protein	NA	NA	NA	NA
WP_000252980.1\|1945751_1946147_+	MAPEG family protein	NA	NA	NA	NA
WP_000019588.1\|1946187_1946931_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000564755.1\|1946927_1947899_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_001229399.1\|1948063_1950493_-	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_001214308.1\|1950517_1951618_-	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_001185741.1\|1952005_1952752_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_005048653.1\|1952765_1953332_-	VOC family protein	NA	NA	NA	NA
WP_001025295.1\|1953547_1955281_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	6.8e-87	33.7
WP_005063152.1\|1955457_1955946_+	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
WP_001259572.1\|1957425_1957764_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000455174.1\|1961216_1961675_+	HD domain-containing protein	NA	NA	NA	NA
WP_001103659.1\|1962918_1963314_+	hypothetical protein	NA	NA	NA	NA
WP_134796931.1\|1963365_1964521_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.2e-67	44.7

DBSCAN-SWA_11

2035204 : 2063168

Shigella_phage(23.08%)

holin,integrase,tail,transposase

attL 2044403:2044418|attR 2075140:2075155

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094081536.1\|2035204_2036352_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.5e-146	92.2
WP_111778310.1\|2037190_2038419_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	9.8e-173	96.7
WP_001347103.1\|2040975_2041647_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000920127.1\|2041779_2042193_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_001240061.1\|2043306_2043942_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_001007781.1\|2044199_2044850_+	metal-binding protein ZinT	NA	NA	NA	NA
2044403:2044418	attL	NA	NA	NA	NA
WP_000937511.1\|2045927_2046197_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-19	81.7
WP_000239881.1\|2046253_2046922_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_134800209.1\|2047237_2048881_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_000839572.1\|2051494_2051710_-\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	5.3e-34	98.6
WP_005049343.1\|2052510_2053194_-	antiterminator	I6PDF8	Cronobacter_phage	2.0e-58	49.8
WP_000140020.1\|2053190_2053556_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	7.1e-39	68.1
WP_001265248.1\|2053556_2054615_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.6e-89	48.0
WP_011069426.1\|2054616_2054895_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.5e-09	45.0
WP_001302544.1\|2054835_2055021_+	hypothetical protein	NA	NA	NA	NA
WP_000935258.1\|2055062_2055275_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	6.6e-29	95.7
WP_005069274.1\|2055869_2056286_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.5e-24	72.0
WP_000533619.1\|2056452_2057478_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
WP_001325918.1\|2057713_2058511_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_005063096.1\|2061447_2061951_+	MFS transporter	NA	NA	NA	NA
WP_094081533.1\|2062012_2063168_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	8.9e-67	44.7
2075140:2075155	attR	NA	NA	NA	NA

DBSCAN-SWA_12

2077170 : 2083154

Escherichia_phage(37.5%)

integrase,holin

attL 2076885:2076944|attR 2093901:2094170

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2076885:2076944	attL	NA	NA	NA	NA
WP_000839572.1\|2077170_2077386_-\|holin	class II holin family protein	M1FN85	Enterobacteria_phage	5.3e-34	98.6
WP_005049343.1\|2078186_2078870_-	antiterminator	I6PDF8	Cronobacter_phage	2.0e-58	49.8
WP_000140020.1\|2078866_2079232_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	7.1e-39	68.1
WP_001265248.1\|2079232_2080291_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.6e-89	48.0
WP_011069426.1\|2080292_2080571_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.5e-09	45.0
WP_001302544.1\|2080511_2080697_+	hypothetical protein	NA	NA	NA	NA
WP_000935258.1\|2080738_2080951_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	6.6e-29	95.7
WP_005069274.1\|2081545_2081962_-	hypothetical protein	A0A076GCN9	Escherichia_phage	1.5e-24	72.0
WP_000533619.1\|2082128_2083154_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
2093901:2094170	attR	NA	NA	NA	NA

DBSCAN-SWA_13

2122029 : 2128336

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100804.1\|2122029_2122575_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.5e-50	57.3
WP_000857516.1\|2122579_2123458_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.1e-106	64.1
WP_001023623.1\|2123516_2124416_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.4e-29	35.6
WP_000699406.1\|2124415_2125501_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-100	53.6
WP_000183041.1\|2125873_2126767_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.3e-46	42.0
WP_001116126.1\|2126941_2128336_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	1.8e-18	30.9

DBSCAN-SWA_14

2156057 : 2236948

Enterobacteria_phage(50.0%)

tail,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_134796937.1\|2156057_2157254_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000003197.1\|2157687_2158347_+	VWA domain-containing protein	NA	NA	NA	NA
WP_000119071.1\|2158343_2159105_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_025745239.1\|2159101_2160625_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_000489605.1\|2160820_2161042_+	hypothetical protein	NA	NA	NA	NA
WP_000275665.1\|2162539_2163388_+	DNA-3-methyladenine glycosylase 2	NA	NA	NA	NA
WP_134796937.1\|2166616_2167813_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000667591.1\|2171989_2175055_+	multidrug efflux RND transporter permease subunit MdtC	NA	NA	NA	NA
WP_128882016.1\|2175055_2176471_+	MFS transporter	NA	NA	NA	NA
WP_000675144.1\|2176467_2177871_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.2e-33	29.4
WP_000137862.1\|2177867_2178590_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	3.7e-31	33.2
WP_005049106.1\|2179258_2180620_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	7.1e-217	99.5
WP_001295425.1\|2180961_2181279_-	hypothetical protein	NA	NA	NA	NA
WP_000807346.1\|2181684_2182584_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	9.8e-13	29.0
WP_000178554.1\|2182665_2183445_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000844250.1\|2183544_2184585_-	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_000490707.1\|2184632_2185988_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_000823288.1\|2185991_2186276_-	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_000182919.1\|2186306_2186759_-	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000853873.1\|2186768_2188031_-	tagatose-bisphosphate aldolase subunit GatZ	NA	NA	NA	NA
WP_005049088.1\|2188059_2188914_-	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_000129574.1\|2189221_2190274_-	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_000858519.1\|2190530_2191808_+	MFS transporter	NA	NA	NA	NA
WP_000011982.1\|2192804_2193770_+	kinase	NA	NA	NA	NA
WP_000434038.1\|2193743_2194490_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_005049077.1\|2194537_2195359_-	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	1.4e-21	36.2
WP_000822271.1\|2195423_2196224_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_001195611.1\|2196220_2197009_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_000134566.1\|2197625_2197955_+	nickel/cobalt efflux transporter RcnA	NA	NA	NA	NA
WP_000546035.1\|2197982_2198465_+	nickel/cobalt efflux transporter RcnA	NA	NA	NA	NA
WP_000153074.1\|2198683_2199022_+	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_000945432.1\|2200152_2202633_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000677404.1\|2202648_2203323_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000830460.1\|2203403_2203928_-	hypothetical protein	NA	NA	NA	NA
WP_011110605.1\|2204220_2204502_-	YehE family protein	NA	NA	NA	NA
WP_001005448.1\|2204763_2205873_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_005049047.1\|2206004_2208038_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.8
WP_094081509.1\|2208433_2209589_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.2e-67	44.7
WP_000636931.1\|2217731_2218139_+	hypothetical protein	NA	NA	NA	NA
WP_001302026.1\|2218680_2219769_+	MoxR family ATPase	NA	NA	NA	NA
WP_001294429.1\|2219779_2222059_+	hypothetical protein	NA	NA	NA	NA
WP_005063396.1\|2222051_2223188_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	4.2e-162	97.1
WP_001087240.1\|2223184_2225188_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.4
WP_128882122.1\|2226088_2226550_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	4.6e-75	98.7
WP_005063442.1\|2226590_2227061_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.6e-81	98.7
WP_128882121.1\|2227107_2227827_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2227823_2229509_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000483772.1\|2229716_2231063_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_001261936.1\|2231460_2231709_+	DinI-like family protein	A5LH55	Enterobacteria_phage	4.1e-38	97.6
WP_000937511.1\|2231824_2232094_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-19	81.7
WP_000239881.1\|2232150_2232819_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_134800210.1\|2233134_2234778_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_000551130.1\|2234958_2235582_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	1.1e-79	77.0
WP_134796941.1\|2235532_2236948_-\|tail	prophage tail fiber N-terminal domain-containing protein	Q8W611	Enterobacteria_phage	2.0e-76	53.4

DBSCAN-SWA_15

2255325 : 2325734

Vibrio_phage(18.75%)

lysis,integrase,transposase,tRNA

attL 2287473:2287489|attR 2334738:2334754

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005085206.1\|2255325_2256273_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
WP_005063605.1\|2256511_2256910_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_000968208.1\|2256906_2257602_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_000553555.1\|2257731_2258616_+	cytidine deaminase	NA	NA	NA	NA
WP_001336068.1\|2258763_2259471_+	outer membrane permeability protein SanA	NA	NA	NA	NA
WP_000383096.1\|2259473_2259713_+	DUF2542 family protein	NA	NA	NA	NA
WP_025745331.1\|2259906_2261145_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreT	NA	NA	NA	NA
WP_001275115.1\|2262386_2263397_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA
WP_134797311.1\|2263412_2264933_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	F2Y2R6	Organic_Lake_phycodnavirus	2.0e-10	32.4
WP_001036964.1\|2264993_2265992_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA
WP_000628659.1\|2266271_2267312_-	HTH-type transcriptional regulator GalS	NA	NA	NA	NA
WP_000440870.1\|2267453_2268530_-	DUF418 family protein	NA	NA	NA	NA
WP_001139613.1\|2268546_2269215_-	GTP cyclohydrolase I FolE	M1Q6X8	Cellulophaga_phage	9.0e-56	56.3
WP_000489228.1\|2270339_2272331_-	catecholate siderophore receptor CirA	A0A0P0I887	Acinetobacter_phage	2.0e-13	36.6
WP_000534384.1\|2272622_2274092_-	lysine-specific permease	NA	NA	NA	NA
WP_000548291.1\|2274297_2275179_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_096965748.1\|2275277_2276327_+	YeiH family protein	NA	NA	NA	NA
WP_000873892.1\|2276400_2277258_+	deoxyribonuclease IV	A0A1V0SBL9	Catovirus	1.1e-24	34.0
WP_001064964.1\|2277260_2278349_+	sugar kinase	NA	NA	NA	NA
WP_000382951.1\|2278404_2279655_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_128881998.1\|2279754_2280696_-	ribosylpyrimidine nucleosidase	NA	NA	NA	NA
WP_000353886.1\|2281591_2282842_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
WP_001292479.1\|2282935_2283874_-	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA
WP_001208129.1\|2283861_2284803_-	pseudouridine kinase	NA	NA	NA	NA
WP_000854472.1\|2285226_2286918_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_000091263.1\|2286934_2287873_-	1-phosphofructokinase	NA	NA	NA	NA
2287473:2287489	attL	NA	NA	NA	NA
WP_000487263.1\|2287872_2289003_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA
WP_000551975.1\|2289370_2290549_+	sugar efflux transporter SetB	NA	NA	NA	NA
WP_000389030.1\|2291324_2291579_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001136824.1\|2291733_2292306_+	elongation factor P-like protein YeiP	NA	NA	NA	NA
WP_134800211.1\|2292528_2293890_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	4.6e-30	26.3
WP_000198822.1\|2294007_2294994_+	zinc-binding GTPase YeiR	NA	NA	NA	NA
WP_005063524.1\|2295032_2295746_+	Kdo(2)-lipid A phosphotransferase	NA	NA	NA	NA
WP_000241011.1\|2296157_2296724_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	A0A1V0DZX6	Clostridioides_phage	4.2e-14	40.7
WP_000470574.1\|2296904_2298461_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA
WP_005108109.1\|2298542_2300357_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000501600.1\|2300357_2301452_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_000088916.1\|2301451_2302477_+	ABC transporter permease	NA	NA	NA	NA
WP_000194911.1\|2302478_2304068_+	microcin C ABC transporter ATP-binding protein YejF	G9BWD6	Planktothrix_phage	1.9e-19	34.0
WP_000202798.1\|2304071_2304416_-	hypothetical protein	NA	NA	NA	NA
WP_000213401.1\|2304748_2305939_-	multidrug efflux MFS transporter Bcr	S4TR35	Salmonella_phage	1.7e-20	23.3
WP_001234850.1\|2305966_2306662_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA
WP_000578068.1\|2306811_2308572_+	DEAD/DEAH box helicase	M4Q3N1	Vibrio_phage	9.3e-100	41.6
WP_000494183.1\|2308696_2308981_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_000050789.1\|2309119_2310127_-	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	1.5e-83	48.3
WP_001135673.1\|2310308_2310536_+	YejL family protein	NA	NA	NA	NA
WP_000256188.1\|2310555_2312316_+	cardiolipin transport protein PbgA	NA	NA	NA	NA
WP_075332750.1\|2312673_2313918_+\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	5.0e-100	43.1
WP_001201667.1\|2314192_2314384_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_012421496.1\|2315029_2315218_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_000919326.1\|2315210_2315396_+	hypothetical protein	NA	NA	NA	NA
WP_000865382.1\|2315435_2315735_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000817013.1\|2315731_2317867_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	2.0e-173	52.3
WP_077900767.1\|2318103_2318313_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_087933729.1\|2318374_2319485_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	2.2e-06	26.1
WP_128881948.1\|2320023_2320374_+\|transposase	transposase	Q716C1	Shigella_phage	4.0e-39	97.7
WP_001254932.1\|2320293_2321445_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_128832263.1\|2322607_2324116_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.1e-43	31.5
WP_038989268.1\|2324657_2325734_+\|transposase	IS110-like element ISEc21 family transposase	NA	NA	NA	NA
2334738:2334754	attR	NA	NA	NA	NA

DBSCAN-SWA_16

2638742 : 2646211

Escherichia_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_128599156.1\|2638742_2639898_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.2e-67	44.7
WP_000017552.1\|2641258_2641411_-	hypothetical protein	G9L6F3	Escherichia_phage	1.7e-18	96.0
WP_000076001.1\|2641428_2641620_+	DUF2633 family protein	G9L6F2	Escherichia_phage	7.3e-27	100.0
WP_000975306.1\|2641930_2642449_+	glycine zipper 2TM domain-containing protein	G9L6F1	Escherichia_phage	6.5e-62	99.4
WP_000755178.1\|2642464_2643004_+	DUF5384 family protein	G9L6F0	Escherichia_phage	1.4e-43	98.9
WP_000138258.1\|2643098_2644676_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_001299507.1\|2644744_2646211_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-88	39.1

DBSCAN-SWA_17

2850008 : 2859905

Pseudomonas_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272883.1\|2850008_2852570_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6
WP_005051483.1\|2853378_2854146_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	4.8e-69	56.3
WP_000847961.1\|2854341_2855250_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	6.6e-118	76.5
WP_134796952.1\|2855531_2856687_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.2e-67	44.4
WP_001192434.1\|2856827_2858924_-\|transposase	Mu transposase C-terminal domain-containing protein	A0A2D1GNK9	Pseudomonas_phage	1.2e-173	48.7
WP_001249841.1\|2858925_2859177_-	helix-turn-helix domain-containing protein	A0A2D1GNH1	Pseudomonas_phage	1.1e-17	53.0
WP_001224023.1\|2859341_2859905_+	hypothetical protein	A0A2D1GNR8	Pseudomonas_phage	1.1e-35	55.8

DBSCAN-SWA_18

3856385 : 3915586

Stx2-converting_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001282349.1\|3856385_3857750_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_011069570.1\|3858767_3858842_+	tryptophanase leader peptide	NA	NA	NA	NA
WP_001295247.1\|3859062_3860478_+	tryptophanase	NA	NA	NA	NA
WP_000131907.1\|3860568_3861816_+	low affinity tryptophan permease TnaB	NA	NA	NA	NA
WP_000085985.1\|3861947_3863123_+	multidrug efflux MFS transporter MdtL	NA	NA	NA	NA
WP_094081509.1\|3863789_3864946_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.2e-67	44.7
WP_000938777.1\|3865024_3865324_+	transcriptional regulator	NA	NA	NA	NA
WP_000190670.1\|3865480_3866230_+	hypothetical protein	NA	NA	NA	NA
WP_001291268.1\|3866251_3866818_+	class I chromate reductase YieF	NA	NA	NA	NA
WP_005081549.1\|3866871_3868209_-	adenine permease AdeP	A0A0R6PHV4	Moraxella_phage	4.5e-62	35.7
WP_000086484.1\|3868373_3869030_+	6-phosphogluconate phosphatase	NA	NA	NA	NA
WP_000116772.1\|3869096_3869570_+	protein CbrB	NA	NA	NA	NA
WP_005108682.1\|3869737_3870412_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.7e-09	29.3
WP_005048975.1\|3870408_3870759_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.5e-27	68.7
WP_134796839.1\|3870755_3872357_+\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.6e-146	61.2
WP_045178171.1\|3872411_3872948_+	CbrC family protein	NA	NA	NA	NA
WP_000766898.1\|3873009_3873732_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_128882080.1\|3874931_3876548_-	carbohydrate-specific porin BglH	NA	NA	NA	NA
WP_000643221.1\|3876633_3878028_-	6-phospho-beta-glucosidase BglB	NA	NA	NA	NA
WP_000137305.1\|3878046_3879924_-	PTS beta-glucoside transporter subunit IIABC	NA	NA	NA	NA
WP_128882079.1\|3880057_3880879_-	transcriptional antiterminator BglG	NA	NA	NA	NA
WP_000377786.1\|3881165_3881891_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000063125.1\|3881905_3882679_-	phosphate ABC transporter ATP-binding protein PstB	G9BWD6	Planktothrix_phage	1.3e-18	31.6
WP_001251991.1\|3882770_3883661_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_000741620.1\|3883660_3884620_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA
WP_000867146.1\|3884706_3885747_-	phosphate ABC transporter substrate-binding protein PstS	A0A1D7SRJ6	Cyanophage	2.7e-51	38.3
WP_094081542.1\|3890524_3891752_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_000827814.1\|3892518_3893091_-	long polar fimbria major subunit LpfA-O113	NA	NA	NA	NA
WP_171763977.1\|3893382_3894729_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000334086.1\|3894831_3896661_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	5.6e-132	43.2
WP_000933743.1\|3896822_3898193_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	3.1e-34	36.7
WP_001251965.1\|3898543_3898963_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_000190506.1\|3898983_3900366_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_000896498.1\|3900392_3901256_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_001176745.1\|3901306_3902848_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_001288592.1\|3902860_3903394_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_001052219.1\|3903408_3903879_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_000429386.1\|3903940_3904180_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_000135623.1\|3904226_3905042_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_000116695.1\|3905050_3905431_-	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_000932839.1\|3906047_3906671_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_000499813.1\|3906734_3908624_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_000763759.1\|3909002_3909446_-	FMN-binding protein MioC	NA	NA	NA	NA
WP_000432970.1\|3909535_3909994_-	transcriptional regulator AsnC	NA	NA	NA	NA
WP_000845131.1\|3910145_3911138_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	3.4e-51	38.0
WP_000956608.1\|3911142_3912594_-	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_005097542.1\|3912587_3914084_-	ATPase RavA	NA	NA	NA	NA
WP_171763977.1\|3914239_3915586_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

4304447 : 4374576

Stx2-converting_phage(30.77%)

integrase,transposase,tRNA

attL 4352703:4352723|attR 4381797:4381817

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005050598.1\|4304447_4305485_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_005108686.1\|4307927_4308443_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030593.1\|4308484_4308694_-	CsbD family protein	NA	NA	NA	NA
WP_005108685.1\|4308809_4310135_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646078.1\|4310207_4310816_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002907.1\|4310925_4311294_-	diacylglycerol kinase	NA	NA	NA	NA
WP_005050606.1\|4311464_4313888_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455241.1\|4314042_4314915_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_001295693.1\|4314927_4315425_-	chorismate lyase	NA	NA	NA	NA
WP_000783447.1\|4317456_4318377_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973658.1\|4318528_4319869_-	maltoporin LamB	NA	NA	NA	NA
WP_005050616.1\|4319940_4321056_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	1.1e-18	32.2
WP_000695390.1\|4321420_4322611_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_001297290.1\|4322764_4324309_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252058.1\|4324323_4325214_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_001097282.1\|4325585_4327061_+	D-xylose transporter XylE	NA	NA	NA	NA
WP_000202902.1\|4327104_4327515_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000487766.1\|4327640_4327784_-	hypothetical protein	NA	NA	NA	NA
WP_001295279.1\|4327784_4328063_+	periplasmic protein	NA	NA	NA	NA
WP_000745743.1\|4328109_4330206_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_001341739.1\|4330928_4331567_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_000757324.1\|4331680_4331923_-	hypothetical protein	NA	NA	NA	NA
WP_000789974.1\|4332384_4334034_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_001290322.1\|4334558_4335908_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_134796839.1\|4336073_4337675_-\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.6e-146	61.2
WP_005048975.1\|4337671_4338022_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.5e-27	68.7
WP_005108682.1\|4338018_4338693_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.7e-09	29.3
WP_171763967.1\|4338852_4340080_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.8e-177	99.0
WP_011069602.1\|4340279_4340966_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	1.1e-37	45.6
WP_005065417.1\|4341113_4341797_+	YjiH family protein	NA	NA	NA	NA
WP_000211962.1\|4341793_4342255_+	membrane protein	NA	NA	NA	NA
WP_000568430.1\|4342267_4343440_+	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_000340749.1\|4343504_4344416_+	hypochlorite stress DNA-binding transcriptional regulator HypT	NA	NA	NA	NA
WP_000986206.1\|4344408_4344801_-	anti-adapter protein IraD	NA	NA	NA	NA
WP_120795393.1\|4344797_4344881_-	iraD leader peptide	NA	NA	NA	NA
WP_000062539.1\|4346250_4347081_+	DUF2686 family protein	NA	NA	NA	NA
WP_000844159.1\|4347221_4347995_-	Uxu operon transcriptional regulator	NA	NA	NA	NA
WP_000208166.1\|4348209_4349670_-	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	2.1e-49	32.2
WP_000438582.1\|4349750_4350935_-	mannonate dehydratase	NA	NA	NA	NA
WP_000558239.1\|4351274_4352618_+	gluconate permease GntP	NA	NA	NA	NA
4352703:4352723	attL	NA	NA	NA	NA
WP_000816511.1\|4352868_4353771_-	type 1 fimbria D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_000870598.1\|4353790_4354294_-	type 1 fimbria minor subunit FimG	NA	NA	NA	NA
WP_001244836.1\|4354306_4354837_-	type 1 fimbria minor subunit FimF	NA	NA	NA	NA
WP_000120997.1\|4354846_4357483_-	fimbrial usher FimD	NA	NA	NA	NA
WP_000066552.1\|4357549_4358275_-	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_000824103.1\|4358311_4358851_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_000695529.1\|4358915_4359464_-	fimbrial protein	NA	NA	NA	NA
WP_000044711.1\|4359944_4360541_-	type 1 fimbria regulatory protein FimE	A0A2L1IV36	Escherichia_phage	3.9e-50	53.4
WP_001295734.1\|4363074_4363791_+	N-acetylneuraminic acid outer membrane channel NanC	NA	NA	NA	NA
WP_005048917.1\|4363810_4364917_+	N-acetylneuraminate epimerase	NA	NA	NA	NA
WP_000991455.1\|4364981_4365962_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	Q08JA2	Stx2-converting_phage	7.9e-101	56.2
WP_050597212.1\|4367177_4367918_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_134797283.1\|4368740_4369896_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.0e-66	44.4
WP_071829150.1\|4370823_4371060_-	DUF2686 family protein	NA	NA	NA	NA
WP_000747032.1\|4372221_4373389_+\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	100.0
WP_001218324.1\|4373364_4374576_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.0e-77	42.3
4381797:4381817	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP030773

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

990 : 101712

Escherichia_phage(38.89%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005061047.1\|990_1938_+\|protease	omptin family outer membrane protease IcsP	NA	NA	NA	NA
WP_000165219.1\|1906_2074_-\|transposase	transposase	A0A0N7BVE9	Escherichia_phage	7.1e-10	91.4
WP_001046939.1\|3484_4351_+	type 3 secretion system effector OspB	A0A0P0ZCT1	Stx2-converting_phage	9.4e-29	32.7
WP_000850660.1\|4679_5420_+	PAP2 family phosphatase PhoN2	A0A1B1IUP6	uncultured_Mediterranean_phage	2.6e-11	28.9
WP_025745429.1\|8052_8403_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.8e-08	37.0
WP_005061014.1\|9742_11452_-	ShET2/EspL2 family type III secretion system effector toxin	NA	NA	NA	NA
WP_001121867.1\|11883_12603_-	type III secretion system effector phosphothreonine lyase	NA	NA	NA	NA
WP_000868563.1\|13634_14213_-	hypothetical protein	NA	NA	NA	NA
WP_000338649.1\|15534_15720_-	hypothetical protein	NA	NA	NA	NA
WP_171767122.1\|16177_17524_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_000622995.1\|17967_18315_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.4e-46	75.7
WP_000026470.1\|21202_21880_+	type 3 secretion system effector OspD1	NA	NA	NA	NA
WP_011114726.1\|22391_22706_+	hypothetical protein	NA	NA	NA	NA
WP_000901798.1\|22987_23554_+	type III secretion effector IpgB2	NA	NA	NA	NA
WP_005064872.1\|26124_27318_-\|transposase	IS4-like element ISSfl1 family transposase	S5FM71	Shigella_phage	2.0e-138	62.5
WP_011114728.1\|27750_28533_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	8.5e-138	98.8
WP_000200287.1\|29259_30459_+	AAA family ATPase	Q71TL9	Escherichia_phage	2.0e-175	75.1
WP_000431558.1\|30458_31439_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	5.0e-95	58.2
WP_075332577.1\|32468_33647_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.3e-28	32.1
WP_000957853.1\|36066_36255_+	hypothetical protein	NA	NA	NA	NA
WP_072075159.1\|38388_38811_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	7.7e-53	98.1
WP_005116773.1\|38752_39541_-	AraC family invasion system transcriptional regulator VirF	NA	NA	NA	NA
WP_000957712.1\|40552_40819_+	type 3 secretion system effector OspE2	NA	NA	NA	NA
WP_005049126.1\|41966_43163_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_005038443.1\|43413_43887_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_094085526.1\|43975_44840_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	6.7e-19	47.7
WP_010921643.1\|46180_47593_+	type 3 secretion system effector OspC1	NA	NA	NA	NA
WP_010921642.1\|47921_49619_+	type III secretion system effector OspD3	NA	NA	NA	NA
WP_000019158.1\|50021_50294_+	hypothetical protein	NA	NA	NA	NA
WP_072056208.1\|51857_52556_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	7.3e-125	99.1
WP_077901500.1\|55164_56529_-	MFS transporter	NA	NA	NA	NA
WP_010921638.1\|58792_60517_-	T3SS effector E3 ubiquitin-protein ligase IpaH4.5	NA	NA	NA	NA
WP_010921637.1\|60942_62640_-	T3SS effector E3 ubiquitin-protein ligase IpaH7.8	NA	NA	NA	NA
WP_004998488.1\|64048_65080_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000957853.1\|67423_67612_-	hypothetical protein	NA	NA	NA	NA
WP_001034121.1\|68013_72108_+\|protease	serine protease autotransporter toxin SepA	Q9LA58	Enterobacterial_phage	7.3e-281	42.3
WP_075332747.1\|75658_77113_+	type 3 secretion system effector OspC2	NA	NA	NA	NA
WP_000019158.1\|78749_79022_-	hypothetical protein	NA	NA	NA	NA
WP_010921625.1\|79293_79596_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_000405245.1\|79586_80069_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_149528155.1\|81962_83654_-	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_094081542.1\|83872_85101_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_128882125.1\|86892_87378_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011114751.1\|87365_87650_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_001346193.1\|88551_88716_+	hypothetical protein	NA	NA	NA	NA
WP_005048975.1\|90568_90919_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.5e-27	68.7
WP_001088287.1\|90915_91590_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
WP_094169927.1\|92161_93616_+	T3SS effector OspC family protein	NA	NA	NA	NA
WP_134798317.1\|97187_98384_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_128882030.1\|98575_99580_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	3.4e-184	97.5
WP_001102512.1\|100195_100333_+	hypothetical protein	NA	NA	NA	NA
WP_005059304.1\|100932_101712_+\|protease	type III secretion system effector cysteine protease IpaJ	NA	NA	NA	NA

DBSCAN-SWA_2

144775 : 185735

Stx2-converting_phage(45.45%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001195004.1\|144775_145978_-\|protease	alpha-tubulin-specific protease	NA	NA	NA	NA
WP_128882073.1\|146506_149815_+	outer membrane autotransporter IcsA	A0A2L1IV18	Escherichia_phage	6.7e-75	28.8
WP_000612525.1\|151999_153652_+	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
WP_128861100.1\|154158_154572_-	reverse transcriptase	NA	NA	NA	NA
WP_094081542.1\|154645_155873_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_000828661.1\|157285_158035_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_094081568.1\|158204_159049_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.2e-22	49.1
WP_005015412.1\|159094_159475_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_000445929.1\|159657_160053_-	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_000921952.1\|160052_161012_-	plasmid segregation protein ParM	A0A222YXF2	Escherichia_phage	1.4e-62	40.9
WP_128567749.1\|161451_162354_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_031942478.1\|162350_162662_+	hypothetical protein	NA	NA	NA	NA
WP_000086135.1\|162725_163409_+	DNA methylase	A0A2I7RE86	Vibrio_phage	2.3e-30	36.9
WP_001104887.1\|163409_163631_+	hypothetical protein	NA	NA	NA	NA
WP_001006196.1\|164121_164892_+	hypothetical protein	NA	NA	NA	NA
WP_149528156.1\|165958_167560_-\|transposase	IS66-like element ISSfl3 family transposase	A0A0P0ZBS5	Stx2-converting_phage	7.8e-146	61.3
WP_005048975.1\|167556_167907_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.5e-27	68.7
WP_004967157.1\|167903_168578_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_000607008.1\|170171_170810_-	hypothetical protein	NA	NA	NA	NA
WP_004967157.1\|171637_172312_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
WP_005048975.1\|172308_172659_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	3.5e-27	68.7
WP_134798364.1\|173264_174420_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.4e-66	44.7
WP_024260696.1\|176828_177113_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_000421262.1\|177112_177388_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000813626.1\|179855_180074_+	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_001159860.1\|180075_180381_+	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_000936806.1\|180773_182411_+	T3SS effector E3 ubiquitin-protein ligase IpaH9.8	NA	NA	NA	NA
WP_000705601.1\|183139_183730_+	type III secretion system effector protein kinase OspG	NA	NA	NA	NA
WP_064753708.1\|184415_185735_+\|transposase	IS4 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP020753

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP030773

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection