CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP021404	Celeribacter manganoxidans strain DY25 chromosome, complete genome	2 crisprs	csa3,cas3,WYL,cas8e,cse2gr11,cas7,cas6e,cas1,cas2	3
NZ_CP021406	Celeribacter manganoxidans strain DY25 plasmid pDY25-B, complete sequence	0 crisprs	NA	1
NZ_CP021410	Celeribacter manganoxidans strain DY25 plasmid pDY25-F, complete sequence	0 crisprs	NA	1
NZ_CP021408	Celeribacter manganoxidans strain DY25 plasmid pDY25-D, complete sequence	0 crisprs	NA	0
NZ_CP021407	Celeribacter manganoxidans strain DY25 plasmid pDY25-C, complete sequence	0 crisprs	NA	0
NZ_CP021405	Celeribacter manganoxidans strain DY25 plasmid pDY25-A, complete sequence	0 crisprs	NA	0
NZ_CP021411	Celeribacter manganoxidans strain DY25 plasmid pDY25-G, complete sequence	0 crisprs	NA	0
NZ_CP021409	Celeribacter manganoxidans strain DY25 plasmid pDY25-E, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP021404_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021404_1

1516460-1516569

Orphan

Consensus_repeat	Method
GCGCGGGGCGAGGGCCTGCCCGTTCGGGCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021404_1

>merge|NZ_CP021404|1|1516460-1516569|CRISPRCasFinder
GCGCGGGGCGAGGGCCTGCCCGTTCGGGCGGGCTGGCTCCCATCGTGCTATAGCGCAACCGCCCCGAACAAGCCGAAGGCGCGGGGCGAGGGCCTGCCCGTTCTGGCGGG

>NZ_CP021404|1|1|1516460-1516569|CRISPRCasFinder
GCGCGGGGCGAGGGCCTGCCCGTTCGGGCGGG	CTGGCTCCCATCGTGCTATAGCGCAACCGCCCCGAACAAGCCGAAG
GCGCGGGGCGAGGGCCTGCCCGTTCTGGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021404.1\|WP_097373107.1\|1529924_1531106_-\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181625
NZ_CP021404.1\|WP_097373108.1\|1531197_1531914_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP021404.1\|WP_097373104.1\|1524862_1527946_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP021404.1\|WP_088664389.1\|1506075_1506435_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP021404.1\|WP_097373095.1\|1506578_1509428_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP021404.1\|WP_097373094.1\|1504834_1506001_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|237435
NZ_CP021404.1\|WP_088664381.1\|1514547_1516377_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP021404.1\|WP_088664382.1\|1514068_1514422_+\|hydroxyisourate-hydrolase	unknown	unknown	gnl\|CDD\|225226
NZ_CP021404.1\|WP_097373099.1\|1511999_1512533_-\|ureidoglycolate-lyase	unknown	unknown	gnl\|CDD\|179606
NZ_CP021404.1\|WP_097373101.1\|1516885_1521328_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225463
NZ_CP021404.1\|WP_097373098.1\|1511400_1511799_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|272886
NZ_CP021404.1\|WP_097373109.1\|1532024_1532816_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180773
NZ_CP021404.1\|WP_088664378.1\|1523373_1524012_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP021404.1\|WP_097373102.1\|1521327_1523118_-\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|223801
NZ_CP021404.1\|WP_097373097.1\|1510923_1511367_+\|thioredoxin-TrxC	unknown	unknown	gnl\|CDD\|182889
NZ_CP021404.1\|WP_097373096.1\|1509473_1510736_-\|DUF2254-domain-containing-protein	unknown	unknown	gnl\|CDD\|378351
NZ_CP021404.1\|WP_097373105.1\|1527942_1529109_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP021404.1\|WP_097373100.1\|1512534_1513953_-\|allantoinase-PuuE	unknown	unknown	gnl\|CDD\|211797
NZ_CP021404.1\|WP_157773110.1\|1524158_1524611_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|226424
NZ_CP021404.1\|WP_157773112.1\|1529113_1529716_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366226

Protein	Function_ID	Function_description	E-value
NZ_CP021404.1\|WP_097373107.1\|1529924_1531106_-\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181625	PRK09051, PRK09051, beta-ketothiolase BktB.	0
NZ_CP021404.1\|WP_097373108.1\|1531197_1531914_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.7501e-09
NZ_CP021404.1\|WP_097373104.1\|1524862_1527946_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP021404.1\|WP_088664389.1\|1506075_1506435_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.94982e-62
NZ_CP021404.1\|WP_097373095.1\|1506578_1509428_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP021404.1\|WP_097373094.1\|1504834_1506001_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|237435	PRK13579, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP021404.1\|WP_088664381.1\|1514547_1516377_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP021404.1\|WP_088664382.1\|1514068_1514422_+\|hydroxyisourate-hydrolase	gnl\|CDD\|225226	COG2351, COG2351, Transthyretin-like protein [General function prediction only].	9.83853e-57
NZ_CP021404.1\|WP_097373099.1\|1511999_1512533_-\|ureidoglycolate-lyase	gnl\|CDD\|179606	PRK03606, PRK03606, ureidoglycolate lyase.	1.01753e-80
NZ_CP021404.1\|WP_097373101.1\|1516885_1521328_-\|hypothetical-protein	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	3.94547e-63
NZ_CP021404.1\|WP_097373098.1\|1511400_1511799_+\|lactoylglutathione-lyase	gnl\|CDD\|272886	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase. Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice. [Central intermediary metabolism, Amino sugars, Energy metabolism, Other].	4.20199e-26
NZ_CP021404.1\|WP_097373109.1\|1532024_1532816_+\|SDR-family-oxidoreductase	gnl\|CDD\|180773	PRK06949, PRK06949, SDR family oxidoreductase.	3.11193e-78
NZ_CP021404.1\|WP_088664378.1\|1523373_1524012_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	3.30965e-36
NZ_CP021404.1\|WP_097373102.1\|1521327_1523118_-\|outer-membrane-protein-assembly-factor	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	4.21099e-96
NZ_CP021404.1\|WP_097373097.1\|1510923_1511367_+\|thioredoxin-TrxC	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	3.89609e-42
NZ_CP021404.1\|WP_097373096.1\|1509473_1510736_-\|DUF2254-domain-containing-protein	gnl\|CDD\|378351	pfam10011, DUF2254, Predicted membrane protein (DUF2254). Members of this family of bacterial proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.	4.91544e-104
NZ_CP021404.1\|WP_097373105.1\|1527942_1529109_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	7.73189e-51
NZ_CP021404.1\|WP_097373100.1\|1512534_1513953_-\|allantoinase-PuuE	gnl\|CDD\|211797	TIGR03212, uraD_N-term-dom, putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.	0
NZ_CP021404.1\|WP_157773110.1\|1524158_1524611_+\|cytochrome-c	gnl\|CDD\|226424	COG3909, COG3909, Cytochrome c556 [Energy production and conversion].	7.50716e-27
NZ_CP021404.1\|WP_157773112.1\|1529113_1529716_-\|hypothetical-protein	gnl\|CDD\|366226	pfam00652, Ricin_B_lectin, Ricin-type beta-trefoil lectin domain.	1.79586e-06

>NZ_CP021404.1|WP_088664381.1|1514547_1516377_+|ABC-transporter-ATP-binding-protein
MLDTPQTPLVSIENLRVEFDTNDGLVVGVEDVSFEIGAGETVCVVGESGSGKSISSLSLIRLVEFGGGRIANGQLNFRRGDSAESTIDVARADNALMRTIRGNEIAMIFQEPMSALNPVFTIGRQLSEGLRVHKGLSREAAMARALELLQRVRIPEPERRLNQYPHELSGGMRQRVVIAMALACEPRLLIADEPTTALDVTIQAEILALIDRLKRETGTAVLFITHDMAVVAQVADRVVVMYRGNKVEEGPVEQIFEAPSHDYTRALLSAVPKLGEMAGTDRPAPLNVLGQPKVEARPPRAGSGEPLLEVRNLTTRFAVKGGLLRRTVARVHAVEDVSFTLNAGETLSLVGESGCGKSTTGRSILRLIEPDSGQIRLGDTDVLALSEREMRQARRDMQMIFQDPYSSLNPQMRLMDQVAEPIRNFGLERGSAIEDRVADLFDRVDLPRSFLRRFPHELSGGQRQRIAIARALALNPKLIVADEAVSALDVSIQAQVLNLLIELQADLGISLLFISHDMAVVERISHQAAVMYLGRIVEIGPRRAIFEDPRHPYTRDLLSAVPIADPRRRKRESELNFKPIPSPVFPLDYQPAPSTYDEVTPGHFVLRDV
>NZ_CP021404.1|WP_088664382.1|1514068_1514422_+|hydroxyisourate-hydrolase
MAGYLTTHVLDTARGCPAENIEITLYRIDGAERVEIARMRTNEDGRTDGPILPDDDFAPGIYELIFDAGAYLEATGAPGETPRFLDQIPIRFGMSRADHYHVPLLLSPFGYSTYRGS
>NZ_CP021404.1|WP_097373100.1|1512534_1513953_-|allantoinase-PuuE
MDRYDRDMQGYGQTPPDPRWPGGAKIAVQIVLNYEEGGENCILHGDAASEAFLSEIVGAQPWPGQRHWNMESIYEYGARAGFWRLHRLFTEMDIPLTIYGVATALARSPEQVAAMQDADWEIASHGLKWVEYKDASPQDEAADMAEAIRLHTEVTGTRPRGWYTGRCSHNTVRLAAEEGGFDYISDTYADDLPYWIREGDRDQLILPYTLDANDMRFATPQGFNTGEHFYQYLKDSFDALYAEGERGAAKMLSIGLHCRLIGRPGRIMGLKRFLDYAASKPDVWFARRIDIARHWAETHPAPGPRINPSQMDVESFTRRFGGVFEHSPWIAERAHALELGPAHDTAIGVHSALCRIFRRASGDEQLGVLTAHPDLAGKLAQARELTEDSTAEQASAGLDALTPSEKAAFTDLNDRYTAKFGFPFIIAVRDHDKAGILAAFQDRVENDRATEFVAACRQVERIALHRLRAMEF
>NZ_CP021404.1|WP_097373099.1|1511999_1512533_-|ureidoglycolate-lyase
MTATRDPLPVRPLTAQDFAPFGDLLDTTGAPDKIINQGLCGRYHDRARIDVDGGRTGLSLFDAQPRTLPYRLEMLERHPLGSQAFLPLHQNPFLVIVAPDANGRPGQPQAFLTEPGQGINLLRGTWHGVLTPLFAPGLFAVVDRIAPEGEDPDANLEEHWLTTPVEVVAAQATALRS
>NZ_CP021404.1|WP_097373098.1|1511400_1511799_+|lactoylglutathione-lyase
MAKLIHTMIRVRDEDRSRAFYKDAFGLELAERLDFESFTLIYLSNPETEFELELTVNKGQAEPYDLGNGYGHLAVLVDDADALHARLTEAGYAPRKLVDFAPDGGPLVARFFFVADPDGYQIEVIQRGGRFG
>NZ_CP021404.1|WP_097373097.1|1510923_1511367_+|thioredoxin-TrxC
MSDPVKLTCAACAAVNRLPHEKLGAGPKCGTCGAKLLPGKPLEFDPQSLQAAIRNDDLPLVVDFWAPWCGPCRAMAPAFAQAAGQLAPEVRLAKIDTEAHPAVSRKFGIRGIPLLIRFDRGREAGRVAGARPAGDIVRFARGARLGR
>NZ_CP021404.1|WP_097373096.1|1509473_1510736_-|DUF2254-domain-containing-protein
MISKQLWRLRRVLRKLWVRAAGIALLALVALAAAALLRPLIPDEAVERLGEDAVMPLLSILASSMLTVTTFSLTVMVSAHMQASSQITPRSHRLLLEDTTTQTVLATFLGAFVYALTAIILFRSHIYGATAAVVVFGFTVIVVALVILAVLRWIAHLSRLGSLDETLDQVEERVRDTLRRFRHAPTMGARRLADRDDLPAGLTPVACDRGGHVQFVDMAALARMAEDYSTKIYLPYGPGAFCAPGSPVAHIGRSDAALVKAVAEAFTFGPVRTFDQDARFGLTVLSEIASRALSPGLNDPGTAIEVTGRVERLLCEAQPETEPFEPPRGAERIHLHPTTEADLIEDYFHPVARDGAGMIEVALRLQRALNSLKAAAQRTDRPDMDRAARAAQDRLLEHAEAALPLASDREKLRALAKREA
>NZ_CP021404.1|WP_097373095.1|1506578_1509428_+|aminomethyl-transferring-glycine-dehydrogenase
MPFTPTDYDPYDFANRRHIGPSPAEMEQMLAAVGVDSLDALIDETVPQSIRQAEPLDWAPLTEGELIVRLREVAAKNKVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQGRLEALLNYQTMISDLTGLEVANASLLDEATAAAEAMVMAQRAAKSKAPAFFVDAACHPQTIAVIETRAAPLGIPVIVAPVSELVPEGVFGALFQYPGTEGHLVDFTDQIAALHEVRAVAVVATDLLALTLLKEPGAMGADIAIGSAQRFGVPLGYGGPHAAFMSCRDALKRTMPGRIVGVSVDARGNKAYRLALQTREQHIRREKATSNVCTAQALLAVMASFYAVFHGPKGLRAIAERIHLRAVHLADGLAEAGFAIAPDQYFDTFTVEAGSLQGVILRAALAEGINLRPLSGGRIGISVDETTSRRTVEAVWRAFGITRSYGDATRVALPEGLLRESDYLAHPVFQMNRAEAEMMRYMRRLADRDLALDRAMIPLGSCTMKLNAAVEMMPVTWPEFGQIHPFAPADQALGYAEMIEDLSAKLCQITGYDAMSMQPNSGAQGEYAGLLTIAAYHSARGEDRDICLIPTSAHGTNPASAQMAGMKVVVVKAAGNGDIDLEDFRAKAEAAGARLAACMITYPSTHGVFEDTVREVCAITHHHGGQVYLDGANLNALVGLVKPGEIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPYLPGDPNAGAQGETPGPVSAAPYGSASILPISWSYCLLMGGAGMTQATRVAILSANYIAAQLSDGYEVLFKGRAGRVAHECILDTRPFEKSAGVSVDDIAKRLVDNGFHAPTMSFPVPGTLMVEPTESETKAELDRFIAAMQSIRAEIAQVEAGDWQVEESPLRHAPHTVEDLVADWTRPYPREQGCFPAGAFRVDKYWPPVGRVDNAWGDRNLICTCPPMEAYADAAE
>NZ_CP021404.1|WP_088664389.1|1506075_1506435_+|glycine-cleavage-system-protein-GcvH
MKFTEQHEWLLPEGDTVTVGITEHAATQLGDVVFVELPEVGASVTKDEEIVVIESVKAASDILAPLDGEIVEINEALVANPALINEDAMGDAWFFKIKPSNMDDLDEFMDEAAYKDMVG
>NZ_CP021404.1|WP_097373094.1|1504834_1506001_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MADSQTSGHTGGPGDSDLNVTPLFDFAQRNGGKIVDFAGWALPVQFAPGVMKEHLHTRAAAGLFDVSHMGQVILRHADGATGAARALETLAPADLIGLKEGRQRYGLFTDAQGGILDDLMIANRGDHLFLVVNAANRAADLAHLRAHLTDCEVEEITDRALIALQGPQAEAALAQIVPDAAAMKFMDVVVKDSAFGALWISRSGYTGEDGYEISVAADEADAFASALIAQEGVEPVGLGARDSLRLEAGLCLHGHDIDAATTPVEAALVWAMQKVRRPGGARAGGYPGADRIAAQLDTGPERLRVGLLPGTRAPMREGTLLFAQAEGGTPVGEVTSGAYGPSIGAPMSMGYLRADLCQTGTAIYGEVRGKRLPATVADMPFRPATYKR
>NZ_CP021404.1|WP_097373101.1|1516885_1521328_-|hypothetical-protein
MKAFRITAALIAGAWAFVGPELTPVAPDGWQIGAPRAAAQDAEDEDRDKGLIVNFLEDNLSGEDRSVIINGFSGALSSTVRMDELIISDADGAWLTLRGAVLDWNRSALLRGRVEVEELSAEEIIMPRLPLPAEKPVETSDAQASGFSLPELPVSIRIDKLAIERAEIGEPVIGQDVVATLAGSMRLANGEGEADLDLRRTDGRTGIFSVQGAYSNASDALTIDVALEEDPGGIVASLAGIPDEPSVVARIQGDGPLDDFNATIDLQTDGEERLAGSVELRGQTGGGREFSVDIGGDVTPLFLPQYQDFFGEDVQLTARGATGPDGGVDLERFALTARRLDIAGALVIGGDGLPRSFNIEGAIEDTSGDPVVLPVSGDPLQIQNARLRAQFDAENGDAWEASITTTDVVRGDVSIARLALDGTGTIQADTTEESPRGVTADFRFAATGVDLPDAELSAALGADLGGTAQISWQEDAPLVLESLTLGGEDLTLSATGQARIADRSVALEGSASFEANNLARYAPLIGQPLEGAVRADLEGSGDVLGGIFDLALDVTAQDLAVGIAQLDPLLDGETTLVGRVSRDETGLRIDTIDLRNPDVTLAASGLVAPGQSDVTLDARLAEIGEVLEQYSGPVTLKGTAREVGENAFDVALDLTGPYDLEARVEGRIAPEDVDVVLAASLPDIAPLLPDQDYSGPVAVDGRVTQLTASRFDVDLAVDGPYSTSARVDGEVEIGASDVQITLLVPDIAPLLPQYGYSGPLTAEGRVQERGDGSLDVDLDLTGPYNSTASVDGVVLGGATDIEAQLAVPDISPVVPGYAGPLQAAGTIRELDGGRFAVDLDASGPYGANASVEGVVLGGATDVEAQVYLPDIAPLAPGFSGPLRAAGTIRELDGGQYQVDLDATGPYGSEASVAGVVLGGATDVQARLSVPNIAPFAPGLSGPLTVAGDVREETAGLWDVDLDLTGPYGARGAVDGVVGSGASDVAIELSLPNISPFAPGLSGSLAVDGTVAEVSGGGWRVALDSRGPGSAQARVTGSMAQDFSTVDLDASGSVPLALVNRVLAPRSLAGTAQFDLSINGAPALGSVSGQVTTRGAQMSLPTLGQTLEDINVTVQLGGGRATIDAFARAMAGGRLYVDGPITLSDGYNADLAIRLGDLVLEDPNLYRTSLDGRLSLAGPLTGGAAISGTIDIGETEIRIPETGLAFSTDIPDITHLNEPAIVRATRARAGLIGDDSDGDGSGADGDGGSDGFALNVLIRAPNRIFIRGRGLDAELGGELRVTGTTSDIIPVGSFELVRGRLDLLGKRFTLDEGAVFLQGGLTPSIALSARTVNAGFTSTIGISGTASDPEISFTSEPDLPEDEVLARLFFGQSIENLSPLQAAQLASAVATLAGQGSGGLLTELRENIGVDDLDVTADEDGNAALRVGKYISDNIYTDVTANSQGETTINLNIDLTDTVTVRGGAGSNGETSLGIFFERDY
>NZ_CP021404.1|WP_097373102.1|1521327_1523118_-|outer-membrane-protein-assembly-factor
MPRLSPLVLSLTLSTAAFPAAALDSFRIVAPGASDNLADKLGRASLIKAARDEDRTTPQDLLAAARADYRAYVGALYSEGYYNGTVNILIDGREAADIPPLEPPAQISRIEVRVNPGQTFTFGEARVAPIAPETDLPDGFAPGEPAYSELVSDAGKAAVKGWRAVGFAKADVPQQQVTANHAARRLDVRLGVDPGPRLTFGELRISGNKRVRTERIREIAGLPTGKVFDPDELDLASERLRRAGAFRSVSLSEAEEVAPGNVLPIDAALIEEKRRRLGFGAELSSVDGATLSTYWLHRNLLGGAERLRIDGEIAQIGGDEQPDFTLSARFTRPATFQTDTDLYVLGTLAREREPNYDSDSFTFGGGLTRIVTPELTLEAGALFRTAHIDDAFGERDYTLIAFPITAEYDKRNDELNPTGGYYIDLGVQPLLGLSDTPSGAQITADARAYYGFGKDDRAVVAGRLQFGSLVGPDLNEAPPDYLFYAGGGGSVRGFPYQELGVEVDDETVGGRSFIGASVELRGGITDALGLVGFVDTAYIGANSWIDDEGSWITGAGIGVRYQTGLGPIRFDIATPVSGGDDDISPYQIYIGIGQAF
>NZ_CP021404.1|WP_088664378.1|1523373_1524012_+|ParA-family-protein
MRGTTITIAQQKGGSGKTTLAINLAVEYRRLGCSVAVLDTDPQGSLGRWFMTRMEASGGAPDIEFSTASAWGVGYEVEKLRKSHDVVIVDTPPKADADLRPALRVADLVVVPVSASHVDLWATESVLELAERAGRPVLVVLNRARGGTRLTTEIAQKLQDLSAPVATTVIGNRVVYAEAAGTGQGVSERGRNSPAAAEVNALVGEIGDRLDA
>NZ_CP021404.1|WP_157773110.1|1524158_1524611_+|cytochrome-c
MTRSPRSLILAVSVIALGAGAALAEAHMDPIEARQQAMKTVGASTKTLAQMANGTNPFDATAAETALSEMQAAVADFATYFPDGSESDESEAAPAIFSDRDGFEEQVAEFQADIDTALETPPSSQDELKVAFGNVAGNCKACHETYRVDK
>NZ_CP021404.1|WP_097373104.1|1524862_1527946_-|efflux-RND-transporter-permease-subunit
MSFEKRAHKAGFADTFVARPIFGIVLNLLIIIAGLAALTSVDIREMPDVDQPVLSVRTTYDGAVASTVDTEVTQVLEDALSALEGMSYIESTSSAESSRITIDLSDGTDVDVAANEAREIVSNTLRSLPDDIDDPTVSKSDSNADAIIRLALLGNASFNELTQLAEGAVYERLSLIDGIAEVTVRGNRANEFRVAANLPSLLSRGLTVFDVSTALAQLRDDTALGSLSTDSQTLSLRVGNDEVTVDTINQLPVNETTRVADVAFVQLIPEDASVYTRVNGETAVSLDITRQSVGNTLEISRDVGVAVEELRSQLPEGVQLLVTSDDGIFIEGSINEVVKSILMATVIVVAVIFLFLRSPRATLIPAVTIPVALIGTLAAIWLTGFSVNTISLLALVLATGMVVDDAIVVIENIVRKRKSGMGAFAAAAAGTNEVFFAVISTTATLAAVFIPISFLPGQAGGVFSEFGFVLAFAVTLSSITALTLAPVLAALLDPGKSQAKAVETKPGALARGFDTVMDFAIRTPLLVLSVAIGFAMIAIGAAATLPSTITPEEDRGFFLVQARGASDTAIDYLDSQVVLVEEILAPYLQSGQIAAVQSIIGIGGGTSAFIVVRLPDWAERDFTQQELIAQISGQLASVPGVQVSARSTNSLNIRGAGGGLGLAVTGTNLANMTDAADSLIAAMSQDDTFLNPQLSNNSVDAQLEVSVDTAAASDMGLDSTDVTQLVRAMVLGDVAVSVFSDDVEVDVNVLPGGPPIDDPSDIASLSIRLPSGAYIPLSAVASLDTVVSDAQIERLGGGLSVALQANLGEGVDLSTAMDRVQELADEVLPDGMGITFTGEAATLDDTQGGMYAVFGVALIVVLLVLAAQFESFASAVVIMMTVPFGLAAALLAISITGGSLNYYSQIGLVMLIGVMAKNGILIVEFANQLREAGEDIDTAIRNALRLRIRPVMMTMVSTVFGGLPLILTSGAGAEARIAVGWVIVGGLGFATVFTLFLTPLFYRWIAVWGTAPGAAAKRLRIETESLA
>NZ_CP021404.1|WP_097373105.1|1527942_1529109_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKISVALLSLVVLAGAYAIAFGVPAQVAQLWGGAPSEQTDAAPRGGAGGPGGPGGGPGGPGGPRGQGRTTTVVLAPLEARAYTQELRTVGSAVSLRRAEVVATEAGEVVEAALQANKLVEKGDVLLRLDDRSERLALEIAEANRDQAQATVTRYQGLHQNGSAVVTDVALSEALVELRLAEANVGLAEVALENRTVVAPISGRLGLSDVQVGDQLSTGDTIVTVDDTTTLLATFEMPERSIGLLSEGKPVLVTTPTYTGRVFEGTITAFDSRLDSVTRSATVQAEIDNAEGLLLSGMTFAIRMNEDTDPLPMVPSTAITWDRSGAGIWVADEGQTARVPVTIRYRDGDQVWLETEAPVGAQIVTEGAAKLREGAQVTTADAARGSGA
>NZ_CP021404.1|WP_157773112.1|1529113_1529716_-|hypothetical-protein
MTPYNFAATAKARIAPAGLAALAGLLLPQSVLAESPVIQTEGPIIHLADNLDESAGLGWCIDTEGRGESDALHAHSCKPTGDDVLFSYAPDIGRIESATYAGKCMAYSARDDAENPFGLVPCDDSDPNQQFSYDPESGQIHLGAEAAQCVTVSAAIDDAGPYQSRDLLLAACDELDPSFKTWIIRDGTDLSSRIRPIQEQ
>NZ_CP021404.1|WP_097373107.1|1529924_1531106_-|acetyl-CoA-C-acyltransferase
MTKSVVIASGVRTAIGDAGGALASVSPCDLGAAVAREAISRAGIEAGDIGQTVFGNVIHTAPEDMYLSRVVAMRAGVPETAPALTLNRLCGSGLQAVVSAAEQILLGNCDIALAGGAESMSRAGHLLTQSRRGQKMGDVVATDMMLGALTDPFGNGHMGVTAENIAKRGNINRAAQDAFAVESHRRAARAIAEGRFKGQILPMTVRQGRTEVTFDTDEHVRPGLTDADLAKLRPVFAKDGSVTAGNASGINDGAAALVLMEAETATARGITPLARIVAYGLGGVAPEVMGLGPVPASRQALERAGLQVSDLDVIESNEAFAAQACAVSADLDLPTNKVNPNGGAVALGHPVGASGAIILTKLLYELERIGGRYGLATMCIGGGQGIAVIVERG
>NZ_CP021404.1|WP_097373108.1|1531197_1531914_-|TetR/AcrR-family-transcriptional-regulator
MTTAGTHLPTTEDLCRSVLENNRDSISIQKPEFAVRKLALILNAALDLSNKKGFQAMSLRDLSRASGVSMGGLYSYFDSKDTLLKMILSEVTGAVEAALGEPPAEVRQSPRDHLLWLIDTHIRLTEAMLPWFTFSFMEAKNFPAAERKLAIDSEELTEGYFAEVLARGQQDGSFSADMPPLMAALTKPLLQDWYVKRAKYRRRKVDIDSYIAMVQGIVLAACGAAAQTTADKAESGAA
>NZ_CP021404.1|WP_097373109.1|1532024_1532816_+|SDR-family-oxidoreductase
MEAIVTGLNPQSAAQVGFDLAGRTALVTGASSGLGVHFARCLAGHGARVAVAARRAEKVATLAEEINASGGEAEALRLDVTDAASVAEAFEGRCFDIVVNNAGIAFNGPALDTPEQDWRQVIDTDLTGVFLVSQAAARAMVAAQRGGSIINIASILGKRVAGGLSAYAAAKAAVVQLTRANALEWARHDIRVNAICPGYIETDINRDFFATEAGQKLVRRIPIRRLGQMEDLSAPLLLLASDHSRFMTGSELVVDGGHLVTSL

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Crispr_ID: NZ_CP021404_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP021404_2

2108008-2108114

Orphan

Consensus_repeat	Method
GCCCGTGGGGGCGGGCAGGCGCTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP021404_2

>merge|NZ_CP021404|2|2108008-2108114|CRISPRCasFinder
GCCCGTGGGGGCGGGCAGGCGCTCGCTCTCGCGCCCTTCGGGCTTGTTCGAGAGCGGAGGTGCTCAGCACGACGGTAGCCTGCCCGTGGGGACGGGCAGGCGCTCGC

>NZ_CP021404|2|2|2108008-2108114|CRISPRCasFinder
GCCCGTGGGGGCGGGCAGGCGCTCGC	TCTCGCGCCCTTCGGGCTTGTTCGAGAGCGGAGGTGCTCAGCACGACGGTAGCCT
GCCCGTGGGGACGGGCAGGCGCTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP021404.1\|WP_097373453.1\|2106688_2107828_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|182682
NZ_CP021404.1\|WP_097373452.1\|2106238_2106682_+\|TrgA-family-protein	unknown	unknown	unknown
NZ_CP021404.1\|WP_097373451.1\|2104969_2106181_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225139
NZ_CP021404.1\|WP_088661839.1\|2102619_2102805_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021404.1\|WP_097373458.1\|2115004_2115901_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP021404.1\|WP_097373457.1\|2112286_2112709_-\|RNA-polymerase-binding-protein-DksA	unknown	unknown	gnl\|CDD\|274124
NZ_CP021404.1\|WP_088661829.1\|2114504_2114939_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341391
NZ_CP021404.1\|WP_097373445.1\|2097369_2099982_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|225803
NZ_CP021404.1\|WP_088661826.1\|2117955_2118408_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP021404.1\|WP_097373450.1\|2103439_2104873_+\|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl\|CDD\|223492
NZ_CP021404.1\|WP_088661827.1\|2116010_2117510_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP021404.1\|WP_097373455.1\|2108713_2109742_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP021404.1\|WP_097373447.1\|2101467_2102079_+\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|381608
NZ_CP021404.1\|WP_088661830.1\|2112886_2113729_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP021404.1\|WP_088661832.1\|2109893_2110706_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|223867
NZ_CP021404.1\|WP_097373454.1\|2108248_2108692_-\|cytochrome-c-maturation-protein-CcmE	unknown	unknown	gnl\|CDD\|237317
NZ_CP021404.1\|WP_097373456.1\|2110837_2112031_-\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|181262
NZ_CP021404.1\|WP_097373449.1\|2102937_2103369_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP021404.1\|WP_097373448.1\|2102069_2102627_+\|carboxylesterase	unknown	unknown	gnl\|CDD\|371484
NZ_CP021404.1\|WP_097373446.1\|2100074_2101121_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|182672

Protein	Function_ID	Function_description	E-value
NZ_CP021404.1\|WP_097373453.1\|2106688_2107828_+\|NUDIX-domain-containing-protein	gnl\|CDD\|182682	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional.	9.32868e-42
NZ_CP021404.1\|WP_097373451.1\|2104969_2106181_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	2.83908e-112
NZ_CP021404.1\|WP_097373454.1\|2108248_2108692_-\|cytochrome-c-maturation-protein-CcmE	gnl\|CDD\|237317	PRK13254, PRK13254, cytochrome c maturation protein CcmE.	5.75031e-69
NZ_CP021404.1\|WP_097373457.1\|2112286_2112709_-\|RNA-polymerase-binding-protein-DksA	gnl\|CDD\|274124	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA. The model that is the basis for this family describes a small, pleiotropic protein, DksA (DnaK suppressor A), originally named as a multicopy suppressor of temperature sensitivity of dnaKJ mutants. DksA mutants are defective in quorum sensing, virulence, etc. DksA is now understood to bind RNA polymerase directly and modulate its response to small molecules to control the level of transcription of rRNA. Nearly all members of this family are in the Proteobacteria. Whether the closest homologs outside the Proteobacteria function equivalently is unknown. The low value set for the noise cutoff allows identification of possible DksA proteins from outside the proteobacteria. TIGR02419 describes a closely related family of short sequences usually found in prophage regions of proteobacterial genomes or in known phage. [Transcription, Transcription factors, Regulatory functions, Small molecule interactions].	1.53043e-47
NZ_CP021404.1\|WP_088661829.1\|2114504_2114939_-\|CBS-domain-containing-protein	gnl\|CDD\|341391	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.20021e-49
NZ_CP021404.1\|WP_097373455.1\|2108713_2109742_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	7.55059e-160
NZ_CP021404.1\|WP_088661826.1\|2117955_2118408_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.01299e-18
NZ_CP021404.1\|WP_097373450.1\|2103439_2104873_+\|deoxyribodipyrimidine-photo-lyase	gnl\|CDD\|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	2.92122e-137
NZ_CP021404.1\|WP_088661827.1\|2116010_2117510_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP021404.1\|WP_097373445.1\|2097369_2099982_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|225803	COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	3.71995e-111
NZ_CP021404.1\|WP_097373447.1\|2101467_2102079_+\|peptidoglycan-binding-protein	gnl\|CDD\|381608	cd13926, N-acetylmuramidase_GH108, N-acetylmuramidase domain of the glycosyl hydrolase 108 family. This domain acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a peptidoglycan binding domain.	5.53026e-30
NZ_CP021404.1\|WP_088661830.1\|2112886_2113729_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.59499e-47
NZ_CP021404.1\|WP_088661832.1\|2109893_2110706_-\|glutamate-racemase	gnl\|CDD\|223867	COG0796, MurI, Glutamate racemase [Cell envelope biogenesis, outer membrane].	1.84214e-64
NZ_CP021404.1\|WP_097373458.1\|2115004_2115901_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.0669e-33
NZ_CP021404.1\|WP_097373456.1\|2110837_2112031_-\|NAD(P)-binding-protein	gnl\|CDD\|181262	PRK08163, PRK08163, 3-hydroxybenzoate 6-monooxygenase.	2.35597e-64
NZ_CP021404.1\|WP_097373448.1\|2102069_2102627_+\|carboxylesterase	gnl\|CDD\|371484	pfam11351, GTA_holin_3TM, Holin of 3TMs, for gene-transfer release. This is a family of bacterial 3TM holins. In Rhodobacter capsulatus the protein is expressed just overlapping and downstream of a putative N-acetylmuramidase lysozyme (an endolysin) thought to be responsible for lysing a phage particle, RcGTA - a gene-transfer agent. A holin would be necessary for such an endolysin to access the peptidoglycan. Gene-transfer agents are bacteriophage-like genetic elements with the sole known function of horizontal gene transfer, serving an important role in microbial evolution. In order to be released from the cell these require the combined action of an endolysin and this holin.	5.19023e-27
NZ_CP021404.1\|WP_097373446.1\|2100074_2101121_-\|cysteine-synthase-A	gnl\|CDD\|182672	PRK10717, PRK10717, cysteine synthase A; Provisional.	0

>NZ_CP021404.1|WP_097373453.1|2106688_2107828_+|NUDIX-domain-containing-protein
MSSYFFYGTLRHLPLLNLVLGEDPTRDPDGPRAGLVHARLAGFRLAWAKGQSFPVAVAEPDAVTEGVLVSGLTAPQLARLDYFMTGFGFAPQRVEVETDEGAAATLTYLPRDARWHPGAAYHHDSWLDRHAKLEIAAAAEAMRHYGQVDAAQMAGRFHAIRTRAQARLNAQAQAPVATLRGDAPDVTVLDDRLPYADFFAVEEYRLSVPRHDGGGEIEMDRAVFVSGDAATVLPYDPVRDCVLLVEQFRAGPFARGDRNPMVLEPVAGRVDPGETPEDCARREALEEAGLELGTLHEVARYYPSPGAKSEYLYSYVALADLPESAMGVHGLLGETEDIRTHVISFARLMDLIGSGEANTAPLLITAAWLARERDRLRAG
>NZ_CP021404.1|WP_097373452.1|2106238_2106682_+|TrgA-family-protein
MPTASRLVAALAFAALCYLASDLFVRLLPNGRTDLSFLIINAGIGALCGWLIMGRLVKRGYGKALESGIRTAATALFWALLVWCSAEMIGHSMAMRYDGPTEAVAAVFGLMYDYGLLLVTDWQVMVTLLVGGMLAGLLAEWASHRFD
>NZ_CP021404.1|WP_097373451.1|2104969_2106181_+|class-I-SAM-dependent-methyltransferase
MTIRTSTAGEANLPRYFATVFDQARKSNTGRLDLELPDGRVFRAEAARPGPVAHVTIHNPDCFARLIREGDLGFCEAYVEGWWSTPDLQAFMDYVHADNDAVFDGFPGMGLVRAYERMRFWLNSNSKRQAKKNISYHYDLGNAFYGLWLDDTMTYSSAKFDTGQESLEAAQLQKYASMVDQMGVKPGDHVLEIGCGWGGFAEYAARERGLRVTGLTISREQHDYAVARMRRLGLEDRVTIRMQDYRDETGRYDGIASIEMFEAVGEKYWPVYFAKLRDCLNPGAHATLQIITVQDRRFDIYRKGVDFIQKYIFPGGMLPSPKVLREEVEKAGLRVRGSIEFGESYSTTLRRWHDTFNDRWDEVRALGFDDRFRRMWNFYLTSCAATFMSGNCDVTQITVTRSA
>NZ_CP021404.1|WP_097373450.1|2103439_2104873_+|deoxyribodipyrimidine-photo-lyase
MSDTPAKPVLFWFRRDLRLADHPGLHAALERARANGGAVIPVFVHDREAGGLGAAPRWRLGEGLRVFAEALAEKGSRLILRQGEPLQVLRDLIDETGADCIMWQRAYAPDSIERDSDVKAALESDGIEVESHPGHLLFEPWTVETKQGGFYKVYTPMWNMVKDRDVPEPLRAPSHLRAPDRWPDSDALDDWEMGAAMRQGAAVVAAHATVGEAAARDKFKCFLRDTIADYAKGRDRMDARGTSEMSEPLSYGEIGPRTLWHGAKGAGQGKGVEIYLKELVWREFAYHLMYHTPRLLSDNWREKWDSFPWKEDRRLREVRAWEQARTGVPIVDAALREMYVTGRMHNRARMIVASYLCKHCMVHWRIGQEWFADCLIDWDPASNALGWQWTAGSGPDAAPYFRVYNPYTQAEKFDPDGSYVTAWVAEGQSRPPATALAYFDAIPRAWGLSPDDPYPEPVVSHEEGRARALEAYENRDF
>NZ_CP021404.1|WP_097373449.1|2102937_2103369_+|hypothetical-protein
MRQALMIYAVGMAGFQMAYLGLGFEPARNLGLGLVVLLAVLISGVFGWLWLMRTTPLALGLAFSWAGAACLLGWWWLREVLGTPGWMAGNAVVFAFLTTYLTGAVLHLVVVQQSFALRRVAAWAPVALAAVISLILLAWQGGV
>NZ_CP021404.1|WP_088661839.1|2102619_2102805_+|hypothetical-protein
MSDGFWIALMTEHGPWALLVFWLLFRDQKKDEGARAALNRNTEIIVELTTLIRERLPQKGS
>NZ_CP021404.1|WP_097373448.1|2102069_2102627_+|carboxylesterase
MGLIDGMMTLLFGSGRNVIRDTAEVFRENAEAGAVRAAAHQDAALAQFAAEFAQARVGRFDRMMDGLNRLPRPLLAFGTIGLMAMAMVDPIWFAARMQGIALVPEPLWWLMGAIVSFYFGARHQAKSQAFQSSISQTLARAPQVRASLADLQALAAMPPDGGASPQIAARYSNPVLADWQARRDE
>NZ_CP021404.1|WP_097373447.1|2101467_2102079_+|peptidoglycan-binding-protein
MRSVEQIAREIVAREGGFVDDPDDPGGATQHGVTLGTLRRLGLDLDRDGDIDSGDVRRVTPARATEIFVEHYFTRPRLHALPPPLQPPVFDMYVNAGAQAVRLVQQLLGEMGEPVAVDGIIGPQTIAAAKRAAQAAPDHIADAYGAARRNYYYALADRRPASRKYARRRDGGKGGWIRRAEEFMTPHFHLSAAEHRARVAAWD
>NZ_CP021404.1|WP_097373446.1|2100074_2101121_-|cysteine-synthase-A
MSQQIKIDLADAVGNTPLIRLNRASDETGCEILGKAEFLNPGQSVKDRAALWIIRDAIARGDLRPGGTIVEGTAGNTGIGLALMGASMGFRTVIVIPETQSQEKKDMIRLAGAQLVEVPAKPYRDPNNYVRYSGRLAAALAETEPNGAIWANQFDNTANRQAHIDGTGPEIWAQTDGRVDGFVCAVGSGGTLAGVGMALQPKGVKIALADPMGAALYNYYTEGELRSEGGSITEGIGQGRITANLEGFTPDMAYQIPDDEALPLIFDLLEHEGLCLGGSSGINMAGAIRMAREMGPGHRIVTVLCDYGNRYQSKLFNPDFLKEKGLPLPRFLTDGGERPLPDVREAAE
>NZ_CP021404.1|WP_097373445.1|2097369_2099982_-|mechanosensitive-ion-channel-family-protein
MGQQSPSDRARRSGAAIAPCAATGLPPGTMPLPCPDRNGVTMHRLCRLLLGLALLTLPILTPNPGALLSGAQPLAGAAWAQTEAEAIDYDEWERLATRAEEVLATGQASTEALEIMRGTLANWRTRFLQGQSINATQIQTLRDQISALGAAPDTEAGESEPEEIAARRAALEERLAELQVPIRTAEEAYSRASGLIRQLDALVRERQAAELTELGPTPLNPAHYATAWEDAQTLLRGIAAEFAAAWSMETRSELLRRNGPVVVILGLIGLVLALRGRVWSARIADRVLRRSSAAARAVVLTTLVSLGQLVLPLVGLVLMVLAVLSTGMTGPIGETVLRIIPVMGLTFFVARWLGALTFPRDPEMPAPLTLSAEQRTEGRLHSTVLGLLLAAETLLQALGDADMLSTAALAVLDFPILVIAGLFMMRLGHLLVLHSRNAPVTDEGRQLRDQVVMVLGRLTILLGVLGPVLAAIGYRAAANFAIFSPVLTLALLAALILLQRVQSRVYDITTKREGASSEGLIPVLVNLLIAVLALPVLALIWGARVSDLTELWSQFLAGFSIGTTRISPGDFMTFAIVFAIGYVITRMLQGTLRNTVLPKTRIDIGGQNALISVLGYIGFFLAAVIAITTAGIDLSSLAIVAGALSVGIGFGLQTIVSNFVSGIILLVERPVSEGDWVQVGGVMGIVKRISVRSTRIETFDRTDVIVPNADLITGQVTNWTKGNMSGRLIVKVGVAYGTDTKLVDRVLREVAEAQPMVILTPPPQVIFMGFGADSLDFEVRAILRDVSFIMVVQNDINHEIARRFAEERIEIPFAQRDLWLRNPDALANALHRRGPLRAGSASAAPGTDTTPDSSATPQLTPTADDMSGDD
>NZ_CP021404.1|WP_097373454.1|2108248_2108692_-|cytochrome-c-maturation-protein-CcmE
MQGLKKKRRVQIILLTIVALVVATIMIGIAMKDGINYFRSPSEVVDAPPGPNETFRIGGLVEDGSLERGAGESVRFAVTDGAASVPVVFRGILPDLFGEGQGMVGTGSYVGGTFEATEILAKHDESYMPKEVVDALKEQGVYVEPES
>NZ_CP021404.1|WP_097373455.1|2108713_2109742_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MTYNIAILGASGYTGAELVRIIATHPSMRIAALSADRKAGMAMRDVFPHLAHLDLPDLVRIEELDFATIDLVFCALPHATSQAVIRDLPRDLKIVDLSADFRLRDAAAYEKWYGKPHAAPELQREAVYGLTEFYRDALKSARLIAGTGCNAATGLYSLLPAIRAGVIGLDDIIIDMKCAVSGAGRSLKENLLHAELSEGYHPYAAGGTHRHLGEFDQEFSLAAGRPVAVQFTPTLMPANRGILSASYVSGDAQAIHDAMRAAYADEPFLHVLPMGQVPSTRHVRGSNFVHLGVVAERAEGRATIYAALDNLTKGSSGQAVQNANLALGEVETAGLMLAPVFP
>NZ_CP021404.1|WP_088661832.1|2109893_2110706_-|glutamate-racemase
MAVGIFDSGLGGLTVLDACERRLPDLPLVYLGDNLNAPYGVRDADDIYNLTTAGVARLFDAGCDLVILACNTASAAALRRMQESWIPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVEHVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDMILAEALVRSHVDALKRKMPKPQAAVLGCTHYPLVEAVFRDALGADVSVYSQPDLVAASLADYLTRRPEMRGAGEERIFLTTGDPRKVSDKATQFLRRRIDFTAA
>NZ_CP021404.1|WP_097373456.1|2110837_2112031_-|NAD(P)-binding-protein
MSLIGQKVTVLGAGIAGLAVARALAMRGARVQVLEQAEAISEVGAGIQISPNGAAVIEALGLRQALARVALRADAVRLNDHFGAPVITLPIGGGGVQLLHRADLIAVLAEGAREAGVELRLLQRIERVDLDRDVPRLVTATGACADAPLLIGADGINSPLRAALNDSATPEFSGMVAWRALVPCTPDRAPPPMPQVFMGPGRHLVAYPLRGGRQINLVGVEERHTPQDASWSQPGDPDTFRAAFRQFGDPVRGWLREVEQVMLWGLYRQPVADRWFGPPQCPGAVLVGDAAHPTLPFLAQGANLALEDAWTLARCLSEVDTPASAMALYQSLRAPRVRRVVAAATANARNYHLSNPLVRGIAHAGLRGLDRVARDRMAARYAWIYDHDVTDGPLAAR
>NZ_CP021404.1|WP_097373457.1|2112286_2112709_-|RNA-polymerase-binding-protein-DksA
MKQEQFLPDDYRPAEDEPFMNDRQLEYFRRKLIAWKNDLLADSRDTIEGLQDGTRNIPDVADRASEETDRALELRTRDRQRKLVSKIDAALRRIDDGEYGYCDVTGEPISLKRLDARPIATMSLEAQERHERREKVHRDD
>NZ_CP021404.1|WP_088661830.1|2112886_2113729_+|MoxR-family-ATPase
MKFTGTESYVAAPDLSVAVNAAVTLERPLLVKGEPGTGKTELARQVAQALDLPLIEWHVKSTTRAQQGLYEYDAVSRLRDSQLGDERVADVSNYIRRGKLWEAFAAPSRCVLLIDEVDKADIEFPNDLLQELDRMEFHVYETGETVRARQRPVVIITSNNEKELPDAFLRRCFFHYIGFPDEDVLRRIVEVHFPGLKPALLTAALTRFYEIRETPGLKKKPSTSEVLDWLKLLLAEDLSAEDLKRDAANALPKLHGALLKNEQDVQLFERLAFLERGRAR
>NZ_CP021404.1|WP_088661829.1|2114504_2114939_-|CBS-domain-containing-protein
MLVHQILKSKGIDSVITVEPGSSVADAARILSEKRIGTVVISADGRHAEGILSERDIVREVGRRGPDCLSDTVDQMMTRNPHTCARDESADSVLERMTEGRFRHLPVVENGEMVGLITLGDVVKARLSELAMEKTALEGMIMGH
>NZ_CP021404.1|WP_097373458.1|2115004_2115901_-|LysR-family-transcriptional-regulator
MRASWDDLRIFLSVARGGSLSAAGAGLGMDPATVGRRIARLEEALTAPLFVKSPQGYALSGAGERLLPHAQAAEQAALAAEDAVRGQGERLSGVIRVGAPDGCANFLLPQVLSRIGAAHPELELQIVALPRVFNLNRREADMAIGVSAPTAGRVTVQKIADYRLHLAASRVYLDHAPPLATLDDVKNHRIIGYIPDMIFDKELDYLSEIGVSRVDLASNSVSVQFNWARQGAGLAMVHGFAMPAGPELIPVLPRDSTLTRSFWLIRHADDRRVHRMSRIAALMVGEIRAELERLEGAA
>NZ_CP021404.1|WP_088661827.1|2116010_2117510_+|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MEELSHWIGGRHVKGTSGRFADVMNPATGEVQARVPLASQSELDAAVAEAAAAQPAWGATNPQRRARVMMKFVELLNRDMDKLAEALSREHGKTLPDAKGDVQRGLEVVEFCIGAPHLLKGEFTDAAGPGIDMYSMRQPVGVAAGITPFNFPAMIPLWKMAPALVCGNAFILKPSERDPSVPLMLAELLQEAGLPDGLLQVVNGDKEAVDAILDNETIAAVGFVGSTPIAQYIYARGCAAGKRVQCFGGAKNHMIVMPDADMDQAADALVGAGYGAAGERCMAISVAVPVGEDTADRLIEKLVPRIEALKVGPYTAGTDVDYGPVVTAQARDKILGLVQSGIDQGAELVVDGRNFALQGYEDGFFVGPHLFDRVTPDMDIYQQEIFGPVLSTVRAKTYEEALGYAMDHEMGNGTAIFTRDGDAARDFAARVNVGMVGINVPIPVPLAYHTFGGWKKSSFGDLNQHGPDAFRFYTRTKTVTSRWPSGIKEGGEFTIPTMG
>NZ_CP021404.1|WP_088661826.1|2117955_2118408_-|MarR-family-transcriptional-regulator
MSDDPEHRARTSAEHGYVLDDQAGFLLRKAYQRNATIFAEVVSGGLTATQFSVLYRLAEDGPLSQNLLGRSVAMDGATTKGVVDRLIGRGLLRTDPDPTDRRRHLVSLTAEGVTLVNTAVEQAKEVTARTLDPLSASERRTFLKLLARLS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1353392 : 1377625

Paracoccus_phage(30.0%)

capsid,head,tRNA,portal,protease,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097373016.1\|1353392_1354421_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_088662006.1\|1354752_1355370_+	hypothetical protein	NA	NA	NA	NA
WP_097373017.1\|1355453_1356722_-	cytochrome	NA	NA	NA	NA
WP_097373018.1\|1356992_1357943_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_097373019.1\|1357942_1358680_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
WP_088662002.1\|1358967_1359201_+	acyl carrier protein	NA	NA	NA	NA
WP_088662001.1\|1359710_1360973_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_088662000.1\|1360972_1362127_+	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_097374144.1\|1362778_1364131_+	DNA-packaging protein	A0A1B1IQC4	uncultured_Mediterranean_phage	6.5e-61	37.8
WP_097373020.1\|1364238_1365489_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	5.3e-57	34.4
WP_097374145.1\|1365497_1366169_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	2.3e-30	49.1
WP_097373021.1\|1366315_1367551_+\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	2.0e-64	43.9
WP_097373022.1\|1367773_1368379_+	hypothetical protein	NA	NA	NA	NA
WP_097374146.1\|1368426_1368744_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_097373023.1\|1368740_1369154_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_097373024.1\|1369247_1369661_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_097373025.1\|1369693_1370002_+	gene transfer agent family protein	NA	NA	NA	NA
WP_097373026.1\|1369994_1370216_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_097373027.1\|1370208_1370868_+\|tail	phage tail tape measure protein	D6PFD6	uncultured_phage	5.3e-08	27.9
WP_097373028.1\|1370933_1371566_+	DUF2460 domain-containing protein	A0A0B5A2K3	Paracoccus_phage	3.4e-52	47.4
WP_097373029.1\|1371562_1372510_+	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	8.9e-49	38.4
WP_097373030.1\|1372506_1372983_+	peptidase	A0A1V0DYB6	Dinoroseobacter_phage	2.3e-29	49.6
WP_097373031.1\|1372983_1376922_+	host specificity protein	A0A0B5A7K5	Paracoccus_phage	2.6e-211	39.2
WP_097373032.1\|1376914_1377625_+	DUF2793 domain-containing protein	A0A0K1LM54	Rhodobacter_phage	2.0e-21	48.9

DBSCAN-SWA_2

1727149 : 1753831

Escherichia_phage(27.78%)

integrase,capsid,portal,plate,tail,terminase

attL 1721385:1721400|attR 1729027:1729042

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1721385:1721400	attL	NA	NA	NA	NA
WP_157773124.1\|1727149_1728244_-\|integrase	tyrosine-type recombinase/integrase	G8DH71	Emiliania_huxleyi_virus	2.3e-77	44.9
WP_088664092.1\|1728245_1728419_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157773126.1\|1728499_1728673_-	hypothetical protein	NA	NA	NA	NA
WP_097373218.1\|1728799_1729090_-	hypothetical protein	NA	NA	NA	NA
1729027:1729042	attR	NA	NA	NA	NA
WP_097373219.1\|1729089_1729332_-	hypothetical protein	NA	NA	NA	NA
WP_097373220.1\|1729613_1729847_-	hypothetical protein	NA	NA	NA	NA
WP_157773128.1\|1730048_1730279_-	hypothetical protein	NA	NA	NA	NA
WP_097373222.1\|1730302_1730599_-	transcriptional regulator	A0A2L0V128	Agrobacterium_phage	7.9e-20	51.0
WP_097373223.1\|1730689_1730914_+	hypothetical protein	A0A2L0V139	Agrobacterium_phage	1.0e-08	55.6
WP_097373224.1\|1731047_1731533_-	hypothetical protein	NA	NA	NA	NA
WP_088664018.1\|1731606_1732047_+	hypothetical protein	I3UM53	Rhodobacter_phage	1.6e-16	42.3
WP_097373226.1\|1732055_1732631_-	hypothetical protein	NA	NA	NA	NA
WP_097373227.1\|1732808_1733138_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_097373228.1\|1733134_1733983_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157773130.1\|1733979_1734258_+	hypothetical protein	NA	NA	NA	NA
WP_097373230.1\|1734250_1734922_+	hypothetical protein	NA	NA	NA	NA
WP_097374168.1\|1734989_1735265_+	DUF2312 domain-containing protein	A0A1X9HX62	Ruegeria_phage	4.3e-28	75.6
WP_097373231.1\|1735261_1735651_+	DUF1064 domain-containing protein	A0A1X9HVJ6	Ruegeria_phage	7.9e-36	63.1
WP_088664025.1\|1735647_1736043_+	hypothetical protein	A0A088FQJ8	Escherichia_phage	5.6e-21	46.8
WP_097373233.1\|1736440_1736773_+	DUF4160 domain-containing protein	NA	NA	NA	NA
WP_097373234.1\|1736874_1737951_-	hypothetical protein	NA	NA	NA	NA
WP_097373235.1\|1737961_1738474_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_157773132.1\|1738492_1738849_-	hypothetical protein	NA	NA	NA	NA
WP_097374169.1\|1739412_1740300_-	NAD(P)-dependent oxidoreductase	M1NML0	Moumouvirus	1.2e-07	26.5
WP_088664030.1\|1740550_1740739_+	hypothetical protein	NA	NA	NA	NA
WP_097373237.1\|1740735_1741179_+	hypothetical protein	NA	NA	NA	NA
WP_097373238.1\|1741180_1741855_+	glycoside hydrolase family 108 protein	A0A1V0DY74	Dinoroseobacter_phage	2.3e-51	51.4
WP_097373239.1\|1741854_1742079_+	hypothetical protein	NA	NA	NA	NA
WP_088664034.1\|1742075_1742339_+	hypothetical protein	NA	NA	NA	NA
WP_097373240.1\|1742576_1743107_+	DNA-packaging protein	A0A193GYK5	Enterobacter_phage	5.0e-33	47.1
WP_097373241.1\|1743103_1745134_+\|terminase	phage terminase large subunit family protein	A0A088FQV3	Escherichia_phage	4.8e-233	63.8
WP_097373242.1\|1745138_1745675_+	hypothetical protein	A0A1W6JT65	Escherichia_phage	2.1e-34	47.9
WP_157773134.1\|1745770_1747273_+\|portal	phage portal protein	A0A088FVG5	Escherichia_phage	8.0e-161	60.8
WP_097373244.1\|1747324_1749325_+\|capsid	phage major capsid protein	A0A193GYA3	Enterobacter_phage	7.8e-188	55.3
WP_097373245.1\|1749394_1749730_+	hypothetical protein	A0A193GYL0	Enterobacter_phage	1.0e-07	37.8
WP_097373246.1\|1749729_1750050_+	hypothetical protein	A0A193GYM3	Enterobacter_phage	2.6e-21	47.2
WP_097373247.1\|1750060_1750285_+	hypothetical protein	NA	NA	NA	NA
WP_097373248.1\|1750281_1750659_+	hypothetical protein	NA	NA	NA	NA
WP_157773136.1\|1750788_1751910_+	hypothetical protein	NA	NA	NA	NA
WP_097373250.1\|1751906_1752329_+	hypothetical protein	NA	NA	NA	NA
WP_097373251.1\|1752315_1752867_+\|tail	phage tail protein	NA	NA	NA	NA
WP_097373252.1\|1752863_1753409_+	hypothetical protein	D5LGZ6	Escherichia_phage	1.3e-41	49.2
WP_097373253.1\|1753405_1753831_+\|plate	phage baseplate assembly protein V	Q8H9N5	Vibrio_phage	8.1e-10	44.9

DBSCAN-SWA_3

1757988 : 1782639

Escherichia_phage(53.33%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097373257.1\|1757988_1758327_+\|plate	phage baseplate protein	A0A088FV58	Escherichia_phage	8.6e-39	72.1
WP_097373258.1\|1758326_1759223_+\|plate	baseplate assembly protein	A0A088FQL4	Escherichia_phage	2.6e-98	63.7
WP_097373259.1\|1759215_1759761_+\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	2.1e-34	41.6
WP_097373260.1\|1759753_1761088_+\|tail	phage tail protein	D5LGZ0	Escherichia_phage	8.8e-135	56.9
WP_097373261.1\|1761096_1761366_+\|tail	phage tail protein	A0A088FV63	Escherichia_phage	1.8e-18	55.7
WP_097373262.1\|1761449_1762985_+\|tail	phage tail protein	A0A088FVH5	Escherichia_phage	5.7e-05	67.6
WP_088664095.1\|1762981_1763491_+\|tail	phage major tail tube protein	A0A088FRU2	Escherichia_phage	2.7e-60	67.3
WP_157773142.1\|1763503_1763743_+\|tail	phage tail assembly protein	A0A193GYZ8	Enterobacter_phage	3.7e-12	48.6
WP_097373263.1\|1763869_1766110_+\|tail	phage tail tape measure protein	A0A097I4X9	Vibrio_phage	1.3e-95	52.1
WP_097373264.1\|1766102_1766513_+\|tail	phage tail protein	A0A088FQM4	Escherichia_phage	3.2e-27	43.9
WP_097373265.1\|1766481_1766703_+\|tail	phage tail protein	NA	NA	NA	NA
WP_097373266.1\|1766693_1767692_+	late control protein D	V5YTN9	Pseudomonas_phage	9.3e-73	46.8
WP_088664060.1\|1768131_1769178_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	8.6e-61	43.4
WP_097374170.1\|1769189_1769849_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.8e-25	36.5
WP_088664061.1\|1769990_1771142_+	ribonuclease D	NA	NA	NA	NA
WP_088664062.1\|1771509_1772283_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_097373267.1\|1772558_1773056_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_097373268.1\|1773192_1773435_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_088664065.1\|1773431_1773911_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_088664066.1\|1773910_1775188_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_088664067.1\|1775459_1775753_+	hypothetical protein	NA	NA	NA	NA
WP_097373269.1\|1775963_1776938_+	XdhC family protein	NA	NA	NA	NA
WP_097373270.1\|1776939_1777944_+	molybdopterin-binding protein	NA	NA	NA	NA
WP_088664070.1\|1777991_1779386_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	1.1e-34	34.2
WP_157773144.1\|1779649_1781368_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_097374171.1\|1781508_1782639_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	9.5e-106	53.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP021406

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

48322 : 73092

Trichoplusia_ni_ascovirus(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097374434.1\|48322_49550_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.3e-103	66.5
WP_068101170.1\|49818_51732_-	TRAP transporter fused permease subunit	NA	NA	NA	NA
WP_067919699.1\|51852_52857_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_097374435.1\|53046_54438_-	hypothetical protein	NA	NA	NA	NA
WP_067919701.1\|54528_55272_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.3e-14	29.9
WP_067919702.1\|55268_56093_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	5.3e-05	27.6
WP_067919703.1\|56089_56302_-	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_157773257.1\|57930_58605_+	zinc-binding dehydrogenase	E3SJ82	Synechococcus_phage	4.9e-17	28.4
WP_082850982.1\|58624_58969_+	EthD family reductase	NA	NA	NA	NA
WP_067925940.1\|59112_59676_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_067925958.1\|59959_61195_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_067925943.1\|61191_61677_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
WP_067925946.1\|61676_62648_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_067952182.1\|62644_63649_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A1D8KRZ3	Synechococcus_phage	2.6e-06	38.9
WP_082850984.1\|63811_64546_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_097374437.1\|64515_65535_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_067925955.1\|65531_65828_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_067925956.1\|65879_66839_-\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	1.6e-21	33.6
WP_097374438.1\|68262_69477_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.4e-38	42.3
WP_097374439.1\|69513_70209_-	AAA family ATPase	NA	NA	NA	NA
WP_097374440.1\|70424_70658_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	9.6e-05	44.0
WP_067921509.1\|70712_71087_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	2.4e-05	36.8
WP_067921507.1\|71083_71431_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.5e-25	55.2
WP_097374441.1\|71478_73092_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.0e-108	41.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP021410

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

22019 : 28778

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097374636.1\|22019_22592_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.4e-42	46.7
WP_097374637.1\|22588_23629_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	4.6e-91	49.5
WP_097374638.1\|23625_24483_+	dTDP-4-dehydrorhamnose reductase	K7QJU0	Escherichia_phage	1.1e-32	36.4
WP_097374639.1\|24479_25361_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.9e-83	54.2
WP_157773278.1\|25522_26302_-	hypothetical protein	A5PJ23	Escherichia_virus	5.9e-06	37.1
WP_097374641.1\|26450_27050_+	recombinase family protein	E5FFF9	Burkholderia_phage	4.3e-25	37.4
WP_097374642.1\|27066_27957_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_097374643.1\|28073_28778_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	9.3e-11	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP021404

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP021406

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP021410

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection