CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP022699	Acetobacter tropicalis strain BDGP1 chromosome, complete genome	2 crisprs	DinG,DEDDh,RT	0	3	11	0
NZ_CP022700	Acetobacter tropicalis strain BDGP1 plasmid pAtBDGP1A, complete sequence	0 crisprs	c2c9_V-U4,csa3	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP022699_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022699_1

516605-516908

Orphan

Consensus_repeat	Method
TGGGACAAGACGAAGCAGGGCACCGCCAAAACGTGGGACC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP022699_1

>merge|NZ_CP022699|1|516605-516908|CRISPRCasFinder
TGGGACAAAACCAAGCAGGGTACCGCCAAAACATGGGATCGCACCAAAGAGGGGTCCGAAAAGGCTTGGAATAAAACCGAAAACGGCACTTCCGAAGCCTGGGACAAGACGAAGCAGGGCACCGCCAAAACGTGGGACCACACCAAAGAAGGGTCCGAAAAAGCCTGGAATAAAACCAAAAACGGCACTTCCGAAGCTTGGGACAAGACAAAGCAGGGCACCGCCAAAACGTGGGACCGCACCAAGGACGGGTCTGAAAAGGCATGGGACAAAACCAAAAACGGCACTTCCGAAGCCTGGGACA

>NZ_CP022699|1|1|516605-516908|CRISPRCasFinder
TGGGACAAAACCAAGCAGGGTACCGCCAAAACATGGGATC	GCACCAAAGAGGGGTCCGAAAAGGCTTGGAATAAAACCGAAAACGGCACTTCCGAAGCC
TGGGACAAGACGAAGCAGGGCACCGCCAAAACGTGGGACC	ACACCAAAGAAGGGTCCGAAAAAGCC
TGGAATAAAACCAAAAACGGCACTTCCGAAGCTTGGGACA	AGACAAAGCAGGGCACCGCCAAAACGTGGGACCGCACCAAGGACGGGTCTGAAAAGGCA
TGGGACAAAACCAAAAACGGCACTTCCGAAGCCTGGGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022699.1\|WP_086898172.1\|522425_524303_+\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NZ_CP022699.1\|WP_035382084.1\|518725_519196_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_086898165.1\|507800_509021_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_CP022699.1\|WP_086898164.1\|505149_506091_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP022699.1\|WP_086898168.1\|515879_516356_+\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP022699.1\|WP_058987976.1\|506295_507576_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236032
NZ_CP022699.1\|WP_058987908.1\|525666_526902_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP022699.1\|WP_058987909.1\|525236_525635_+\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377163
NZ_CP022699.1\|WP_058987973.1\|517925_518522_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182625
NZ_CP022699.1\|WP_086898166.1\|509678_510965_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP022699.1\|WP_061470434.1\|524413_525151_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP022699.1\|WP_140385885.1\|520828_521737_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP022699.1\|WP_006559087.1\|512573_514028_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP022699.1\|WP_086898171.1\|521881_522256_+\|DUF333-domain-containing-protein	unknown	unknown	gnl\|CDD\|377156
NZ_CP022699.1\|WP_058987914.1\|519891_520815_+\|N-formylglutamate-amidohydrolase	unknown	unknown	gnl\|CDD\|226264
NZ_CP022699.1\|WP_086898162.1\|503719_504274_-\|DUF1643-domain-containing-protein	unknown	unknown	gnl\|CDD\|377919
NZ_CP022699.1\|WP_140385881.1\|510966_511299_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_006559089.1\|515513_515801_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP022699.1\|WP_086898169.1\|517486_517684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_061470439.1\|514024_515512_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572

Protein	Function_ID	Function_description	E-value
NZ_CP022699.1\|WP_058987908.1\|525666_526902_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.2798e-75
NZ_CP022699.1\|WP_086898165.1\|507800_509021_-\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.46981e-21
NZ_CP022699.1\|WP_086898164.1\|505149_506091_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	2.54516e-51
NZ_CP022699.1\|WP_086898168.1\|515879_516356_+\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	7.9491e-49
NZ_CP022699.1\|WP_058987976.1\|506295_507576_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236032	PRK07495, PRK07495, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP022699.1\|WP_058987909.1\|525236_525635_+\|heme-binding-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	1.76734e-31
NZ_CP022699.1\|WP_058987973.1\|517925_518522_+\|hypothetical-protein	gnl\|CDD\|182625	PRK10659, PRK10659, acetate uptake transporter.	4.75948e-68
NZ_CP022699.1\|WP_086898166.1\|509678_510965_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.16935e-24
NZ_CP022699.1\|WP_061470434.1\|524413_525151_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	5.50551e-42
NZ_CP022699.1\|WP_140385885.1\|520828_521737_-\|hypothetical-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	4.0934e-09
NZ_CP022699.1\|WP_006559087.1\|512573_514028_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP022699.1\|WP_086898171.1\|521881_522256_+\|DUF333-domain-containing-protein	gnl\|CDD\|377156	pfam03891, DUF333, Domain of unknown function (DUF333). This small domain of about 70 residues is found in a number of bacterial proteins. It is found at the N-terminus the of AF_1947 protein. The proteins containing this domain are uncharacterized.	3.15994e-19
NZ_CP022699.1\|WP_058987914.1\|519891_520815_+\|N-formylglutamate-amidohydrolase	gnl\|CDD\|226264	COG3741, HutG, N-formylglutamate amidohydrolase [Amino acid transport and metabolism].	1.21363e-68
NZ_CP022699.1\|WP_086898162.1\|503719_504274_-\|DUF1643-domain-containing-protein	gnl\|CDD\|377919	pfam07799, DUF1643, Protein of unknown function (DUF1643). The members of this family are all sequences found within hypothetical proteins expressed by various bacterial species. The region concerned is approximately 150 residues long.	1.06156e-58
NZ_CP022699.1\|WP_086898172.1\|522425_524303_+\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_CP022699.1\|WP_006559089.1\|515513_515801_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	7.44931e-31
NZ_CP022699.1\|WP_061470439.1\|514024_515512_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0

>NZ_CP022699.1|WP_086898168.1|515879_516356_+|Holliday-junction-resolvase-RuvX
MALLNLTDLTAALARNDRLLGIDPGRKQVGLALSDVSRMVATPLETVKRGKLGAMATHIRTLADRHGIGGMVIGIPLSLDGSFGPAAQAAKDWAMALSDQTGLPVCLWDERLSSSAVNRMLIQEADLSRKKREGVVDQLAAAYILQAALDSMPRPALF
>NZ_CP022699.1|WP_006559089.1|515513_515801_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MSLDLATTRRIAKLARIGLEDAELESVRQKLDGILGWVDQLSEVDVEGVPPMVGTEMEALRQREDVVTDGNCREAVLSCAPETSGPFYTVPKVVE
>NZ_CP022699.1|WP_061470439.1|514024_515512_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MLTGLTLTEARAGLAARKFSARDLATAHMQAIARLNPKLNAYITVLPEKDVLAAADAADARYADGTARPMEGLPIGVKDLFCTKGVKTTAASKMLADFVPPYESSVTQRLLDAGSVFVGKTNLDEFAMGSANITSAFGSVLNPWQRKGDEATALVPGGSSGGSAAAVAAGLALAATGTDTGGSIRQPAAFCGIVGLKPTYGRCSRWGTIAFASSLDQAGPMTRSVADAGLMLEAMAGFDEKDSTSSNRPVPAFAQAVGKSVKGLRVGIPAEYRAPGLPAEIAAMWEQGIAWLRDAGCEIVDVSLPHTKYGLATYYIIAPAECSSNLARYDGIRFGARKDAPTLDGIYERTRAEGFGEEVRNRILMGTYVLSAGYYDAYYLKAQKVRTLIKRDFVQAFEQVDVLLTPTAPSAAFAQGENMDDPVQMYLNDIFTVPASMAGVPALSVPVGLDAKGLPLGLQIIGRHFDEETVLSVGGALEAAAGFAHTPTLHAEAGA
>NZ_CP022699.1|WP_006559087.1|512573_514028_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MSYVIEGKTGNWEIVVGLEVHAQIISQSKLFSGASTKFGGEPNTQVSLVDAAFPGMLPVINRECVAQAVRTGLGLNARINLESRFDRKNYFYADLPQGYQISQFAHPIVGEGTIEIELAGGETRQIGITRLHMEQDAGKLLHDQDPTRSFVDLNRAGVALMEIVSEPDIRAPEEAGAYLRKLRQILRYLGTCDGNMEEGSMRADVNVSVRKAGEPFRTRCEIKNVNSIRFVMQAIEVEAARQVEIWENGGEVDQETRLFDPGRGETRTMRSKEDAHDYRYFPDPDLLPLVIEQAWVDGLKAALPELPDAKRARFQKDYGIPFYDAGVLVAEQSVADFFETVAKGRDGKLAVTWVTGDLFAALNRTGRTIENSPVSAEALGKMLDLISDGTINGKIAKDVFEDMVETGESPDAIVEKKGLKQVTDTGVIDAAVDAIMAKHADKVEEFRSGKDKLFGFFVGQVMKETKGKANPALVNEALKAKLNG
>NZ_CP022699.1|WP_140385881.1|510966_511299_+|hypothetical-protein
MLHPFSLGTRSAAQRTRKGVDSQAATGSGKFTYHFGSDYKKTKAGKRITPCENDFSWKKEVLIASLFILCRPLDARFRKKQVRESEKAFFSHIKFKHLQSKRPDPDYHLP
>NZ_CP022699.1|WP_086898166.1|509678_510965_-|restriction-endonuclease
MKIRYIVSVAAFVVSPAQAETVYRLTAPTLACATPSATRDANEAMLHGHDFSRFQKLYDCRIINDTGRWDEIAENGDVLLLRKTPPTPGLPPLYFARRAVTPLLETSEAEQDLIHTVESFRTEHSASSQRQPVSHKADKTQSETFSPRSVGVQPVIDSVKNSFQALWKKMSILSAQIGWHNGFVKVIEWGVGLYVLLKAAGAYRRRRTFRNTVQTGKRLIDTLADRLQIRRKQLVFQNAYGTTIYDKWNKEKSEFMRREMYACLSKHGYEKYFEKATPELLTYLDQVAFKEPHAVAAKNSNPDIYAPDMDPFDYERYCAKLLKKAGWDAIVTSECGDQGADIVATKKGLRLILQCKLYSRAVGNDAVQQVAAARHHYAGRFAAVVSNAPYTIPAQQLAKTNKIFLLHHDELQDFVRRLENFTSARVRG
>NZ_CP022699.1|WP_086898165.1|507800_509021_-|cation:proton-antiporter
MEKIISLFADFGVFVLFPWVLWRVTRRVLPIVVLPILLGILLAVWHVPVEQWGIPSVYGDDIGWVAVLVLAFTAGLEMWVDPNHGKGAEEAIPSPSLGRLLGGAVVALGGPFLIGSLVVYQFFLPLHGWAAPQVSPLMGAVSLGLCIAVSALPVLIGIVRELEPVHRAVGQLALKLAVVDDAALWIGLAILQFMAKGPSALHGWSWLEFLAVFLLVGLASAGGWAARHFRHPPLIVIWAAVPVYLAAGSWASKQLGLHELIGAYFAGAIMPPSWVRRLPVEEVGTFALIWLAPMFFGHSGLKIDGDALTWPSLAASLALVAVSIVTKMGAVYLFPPASGLTSRQRLSVGALLQCKGLMEIVAATILHAQGMISEFAFAALMVLAVISTSLTGPLFRLFSGKAAEQA
>NZ_CP022699.1|WP_058987976.1|506295_507576_+|4-aminobutyrate--2-oxoglutarate-transaminase
MSTTNKDLLTRRANAVPRGVATATPVFADRAENAELWDVEGRRYIDFAGGIAVLNVGHRHPKVLAAAKAQLERFTHTAFQVSAYESYIELAEKLNALAPFSGPAKTIFFSTGGEATENAVKIARAATGRNGVIAFCGGFHGRTLLASAMTGKVLPYKAPFGTLPGQVYHLPFPDGDVTVEDSLKMLHFLFASDIGPEQVAAIIIEPVQGEGGFRIAPPALLKHLRSLCDEHGIKLIADEVQTGFARTGKMFGIEHSGVEPDLVSVAKSLGGGFPISGVIGRADLMDSVPPGGLGGTYAGAPLACAAALAVLDVIEEEKLIDRANTMGERLKARINGWHKRKDILPVSTARGLGAMIAFDILENHAGEEQRAGFASKVCAKACEKGLILLSCGVKGATIRILTPLTASDALVDEGLDVIEQVLVELA
>NZ_CP022699.1|WP_086898164.1|505149_506091_+|LysR-family-transcriptional-regulator
MDQRYRIPPLAALNAFAAFARTGGIRRAAAELRVDHAAVSRHMRDLEQMLGITLRDRATGKLTLAGHTYYSQIAPLLEGLARATADIRQQTPHLTITCVHGFAYHWLVPRLAAFRRNHPHIDLLLRPVDANTTFHGNGIETDSHADIFYARDDAPSAALRTLRSVAFARPPVFPVASPACVAAMGGQPARLIDLLQAPLLQEEDDAEWRLWFNAHNVTIAHVPSAGRLWQAHITLAAARAGEGIALGNAFLLGDDLETGRLVRITPTREPLQETPLGSYVLRASERAWEKQSLSIFRAWLLEQVAIQSVHTPS
>NZ_CP022699.1|WP_086898162.1|503719_504274_-|DUF1643-domain-containing-protein
MTDLFDAHHVGESRPLTLSDDVVSTATYGGADRCYRYQLKRVWDASRPAVMWLMMNPSVATEYGDDRTVAKCQRYARAWGYGSILVGNTFAYRCTDQKRLLETPDPVGPENDAALLAMAREADLVIAAYGSPHLKALWERGPEVVCMLQQHGIPVYAMRVGANGRPCHPLYLPAALKPVLLPKT
>NZ_CP022699.1|WP_086898169.1|517486_517684_+|hypothetical-protein
MPRFNEQSLSLTPAPNEKWREAVRETWRQTLLYIWEQPTDLPAPRPARAKSASSLERLIPAYSQN
>NZ_CP022699.1|WP_058987973.1|517925_518522_+|hypothetical-protein
MAQSDTLLANPAPLGLMGFGMTTVLLNLHNAGLVPMGAAILGMGLMFGGFAQIIAGILEFLKGNTFGLTAFTAYGAFWLSLVALIALPKLNIVAATDPSLMGSYLLVWGLFTFVMFLGTLRATRAHQTIFASLVVLFVLLGLGDLLAQPNLTVIAGYEGIFCGLSAMYLAAAEILEAQFHYAVLPVGHAGPRLRVAMA
>NZ_CP022699.1|WP_035382084.1|518725_519196_+|hypothetical-protein
MHALARITFGAASVLLMVLAVLLVGFGISDLIKQLFSHSWQTAQTAVVHAISYVVIALAVFDVAKYFMEEEVILSRGKHTLAEARVSLTKFITSIIIAVFVEGLVGIFETRGDGPATVIYPASLLIVATLMVFSLGIYLKLSVQAEGEKKKEQLED
>NZ_CP022699.1|WP_058987914.1|519891_520815_+|N-formylglutamate-amidohydrolase
MKNIAHTLIRRGLNRVFPGGEGTSHPETDRVAAPPPVLVSGAVETPLVLASPHSGCFYPEAFVQNSRQPLHRLRSGEDSYVEELAAGAHALGPVLLSATFPRAFCDVNRAAWDLDPRMFDGPVPSFVKATHRGLSGLGSIPRIVADNRPIYHTRIPFMEAALRIRDYWMPYHATLAETLRLTHARHGICLLLDLHSMPDAPEAGSPDFVLGDGHGTSCDSRFVTTAEDTLTNLGYKTTRNNPYAGGYITRHYGRPREGLHALQIEIRRGLYMDEATRTKNQGFETLQHTLTTLTAQLLQSLSRRTMT
>NZ_CP022699.1|WP_140385885.1|520828_521737_-|hypothetical-protein
MWRAVKSVLQGLGQRFSGRGQSSRSDRAGETHQEGRKSLAVFTMVYNEHEMLPVWARHYVRQAGAGNVYVLDHGSDHLPDLPGCQIITLPRDELDEIDRAAQVAAFQKTLLERYKFVLFTDCDELLVARPSHYLSLQDYVAHTPHKTIRCVGVDVMQQEAGLPPVQWEAPILAQRPYGAVRSWSCKTLLSSVPLAWNPGFHTCQQPSVLDTDLWMFHLKYADQTHMLERLALTRQLKWSARALQTGHGGSHRVSNRSMIRFLEGFQGKRQETDLDSLDLRALVETGTESALHRIPSVFLKSV
>NZ_CP022699.1|WP_086898171.1|521881_522256_+|DUF333-domain-containing-protein
MRHPLFSGSFLSRLRTGAALGLCLSALAACQTPSPATATPTEQTNALAPPQAAQAVSPEVKSRTPVIGMANPASVYCQKAGGTLEIRQGTKGAYGICHMPDGRMCEEWSFFRTGKCSAESLKNS
>NZ_CP022699.1|WP_086898172.1|522425_524303_+|molecular-chaperone-HtpG
MTDTAKAATGSETREFSAEVGRLLDLVVHSLYSEREIFLRELVANAADATDRRRFEALTDGARALPEDAKIRINPDKDARLLTISDDGTGMSREELVSNLGTIARSGTRAFGKQLQDAKPEDRPNLIGQFGVGFYAAFMVADKVDVVSRRAGSDEAWRWTSDGKGSYTLEPATREKAGTDITLHIKTDADEFLDSWRLQAIIRKWSDHIAWPVSIVRDGKEEAANEGTALWRKPKNEVTEEQLNEFYRHITHNFDTPWDTLHWRAEGTLEFSALLFIPGSRPFEFAEQTRESRVKLHVRRMFITDEADILPPWLRFVQGVVDTEDLPLNVSREMLQATPVLARIRKAVTSKVMGELKTRAKDAEAYATFWENFGPVLKEGMWDDAAHRTEVAGISRFRSSAVEGLTSLDDYISRMKPEQDAIYYLTGDNAETLAASPQIEGFMARGVEVLLLSDPVDSFWPDRLSSYEGKALRNVAQGQNDLEKFGAPEETSAEKADMDTLLPALKTALGDAVSDVRATDRLVNSAMVLTAPEGGPDLQLQKLMQRSGQSLPAVTPVLELNPAHPVVHNLAEKVKAGEPITDLAHILLDIASIQSGEPPKDVNAFSRRLMDYLAGSAPAKDAEPA
>NZ_CP022699.1|WP_061470434.1|524413_525151_+|IclR-family-transcriptional-regulator
MGAPPKLIQSIERSAAILEIIAQEGGGARLQQIAAIAGIGKTTAHNILQTLAHLGYVQRRPGDVRYHLGGRILNLARIAGDDNTLRRRLRPVLETIAHKSNATVWLAVPSGDEATYLDILPAPGQPDPVSSGVQQREKLEGSAVGLIFLAFVPGLGKRVLTTRTPQTNDDILARIETVRTRGYALDLGGYRPGTHGVAIPWREKGEVRASICLTGTEDHLPRARLVRLAWMMMKEVETVPFSNVE
>NZ_CP022699.1|WP_058987909.1|525236_525635_+|heme-binding-protein
MKLSCATAMLNTALAEAQRMGVQVCVSIVDAAAWPVAFARMEGTPLGSIDVCNKKARTAVLFHMDSADFGRIAHPDGHAYSLENTNGGLTSFGGGLVLKTADGAVVGAIGVSGASTEDDIAIARKAASALTT
>NZ_CP022699.1|WP_058987908.1|525666_526902_+|MFS-transporter
MTTETVLPENSVPLVVPPRGRTAALLTLTFGTFVVGTGEFAIMGMLPEFAASLGLSDADAGHAITAYALGVVIGAPLITILGARLSRRELLLSLLLLFCFGNFLSIAMPSPGLVEVARFITGLPHGALFGISALVAASMVERSRRGWAVGRVLSGIAISTLVGAPFSTFAADHFGWRIAYLIIGLFGFLTFLGVWRYIPADRPNRSNSPLREVTAIGNTQVLLTLLTAAVGFGGMFAIYTYLTSVLQNVTLVPEWEIMVFMVVWGLGMLAGANAGAWLVDRNLDLAAILALSGSALAMLVFPVVLHSTAGLMLDVFLVPTFVNGLGPALQTRLMDFAGDAQTLAASLNHSAFNIANALGASLGSVLLANHYGYGALGVGGALLSVGGLLVYLLAIVLLKKSGLTEIRGPIT

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Crispr_ID: NZ_CP022699_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP022699_2

3341832-3341984

Orphan

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP022699_2

>merge|NZ_CP022699|2|3341832-3341984|CRISPRCasFinder
ACGTTCATCCCCGCGCGTGTGCGGGGAATACCCTGGCTCGTCCTCGTCGAACATGAGTATGATCGGTTCATCCCCGCGTGTGCGGGGAACACCCTGCCCGTGTTTCTGGAACGATGGGCCGAACCGGTTCATCCCCGCGCGTGCGGGGAACAC

>NZ_CP022699|2|2|3341832-3341984|CRISPRCasFinder
ACGTTCATCCCCGCGCGTGTGCGGGGAAT	ACCCTGGCTCGTCCTCGTCGAACATGAGTATGAT
CGGTTCATCCCCGCGTGTGCGGGGAACAC	CCTGCCCGTGTTTCTGGAACGATGGGCCGAAC
CGGTTCATCCCCGCGCGTGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP022699.1\|WP_086896824.1\|3352321_3352510_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_014106242.1\|3354293_3354704_-\|tRNA(fMet)-specific-endonuclease-VapC	unknown	unknown	gnl\|CDD\|350312
NZ_CP022699.1\|WP_052051562.1\|3355108_3355528_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_086897127.1\|3331597_3332182_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP022699.1\|WP_086896825.1\|3352523_3354233_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP022699.1\|WP_086897081.1\|3330009_3331410_-\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|271357
NZ_CP022699.1\|WP_010511771.1\|3354704_3354929_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226863
NZ_CP022699.1\|WP_039904892.1\|3340286_3340865_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP022699.1\|WP_157772966.1\|3333826_3334162_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NZ_CP022699.1\|WP_157772967.1\|3347369_3349349_+\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|238824
NZ_CP022699.1\|WP_086897077.1\|3334348_3335809_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP022699.1\|WP_086897080.1\|3331406_3331598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_086896819.1\|3341272_3341749_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP022699.1\|WP_086896820.1\|3342602_3345902_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224037
NZ_CP022699.1\|WP_086896821.1\|3346141_3346711_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238824
NZ_CP022699.1\|WP_014106240.1\|3355753_3356650_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187572
NZ_CP022699.1\|WP_086896822.1\|3346813_3347377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP022699.1\|WP_086896826.1\|3338839_3339841_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP022699.1\|WP_167385512.1\|3335801_3338837_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP022699.1\|WP_086897079.1\|3332382_3333687_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121

Protein	Function_ID	Function_description	E-value
NZ_CP022699.1\|WP_014106242.1\|3354293_3354704_-\|tRNA(fMet)-specific-endonuclease-VapC	gnl\|CDD\|350312	cd18745, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.02442e-55
NZ_CP022699.1\|WP_086897127.1\|3331597_3332182_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.13347e-07
NZ_CP022699.1\|WP_086897081.1\|3330009_3331410_-\|sodium:solute-symporter	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	2.42493e-35
NZ_CP022699.1\|WP_014106240.1\|3355753_3356650_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187572	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7. This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.55127e-43
NZ_CP022699.1\|WP_039904892.1\|3340286_3340865_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.77438e-14
NZ_CP022699.1\|WP_157772966.1\|3333826_3334162_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	1.39424e-18
NZ_CP022699.1\|WP_157772967.1\|3347369_3349349_+\|RNA-directed-DNA-polymerase	gnl\|CDD\|238824	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	1.45617e-30
NZ_CP022699.1\|WP_086897077.1\|3334348_3335809_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	7.24848e-69
NZ_CP022699.1\|WP_086896825.1\|3352523_3354233_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	4.85417e-35
NZ_CP022699.1\|WP_086896819.1\|3341272_3341749_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.64081e-11
NZ_CP022699.1\|WP_086896820.1\|3342602_3345902_+\|hypothetical-protein	gnl\|CDD\|224037	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].	3.12997e-24
NZ_CP022699.1\|WP_086896821.1\|3346141_3346711_+\|hypothetical-protein	gnl\|CDD\|238824	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	8.5629e-05
NZ_CP022699.1\|WP_010511771.1\|3354704_3354929_-\|hypothetical-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	5.00087e-16
NZ_CP022699.1\|WP_086896826.1\|3338839_3339841_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	4.15113e-34
NZ_CP022699.1\|WP_167385512.1\|3335801_3338837_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP022699.1\|WP_086897079.1\|3332382_3333687_-\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	9.93543e-73

>NZ_CP022699.1|WP_086896819.1|3341272_3341749_+|GNAT-family-N-acetyltransferase
MKAHEIRLATPEDLSAIKTIIGRHAYSHYVFRIGSKPGPMLDNYASLVHSGRVHVALHDETVHGILVLIPEADAMLLDNVAVAPVAQGLGIGRRLLEFAENTASKAGFSHIKLFTNEAMTENLSLYQRIGYTETHHAEENDLRRVYVVKVMPQRLCSL
>NZ_CP022699.1|WP_039904892.1|3340286_3340865_-|TetR/AcrR-family-transcriptional-regulator
MTMKPKRANKPDVVKNDLLNAAGQILVTNGIQAFTLELVAKEANVSKGGLLHHFPNKKALLDGLFKREMDLFKHEIIASMEKDPVEFGRAARAYIGLNQDGAKETPVIIRHLLAAMLIDPQLSQEWIQHYWRVIRSVGLFETMTPALLLACMAADGLSLWDILEADILDQKTRDGLHGLMEQLTHESGVLRL
>NZ_CP022699.1|WP_086896826.1|3338839_3339841_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MRRASLPAVQALTVHDASSEKSVFVGTYGTSRSIPLAPTQAGRITAISVVSGQYVHRGDILAALEDRLLLEMEEQAEGEVDAARAEVKQAAATYKRSQGLDTIGGLSSGVVEERAHSWQVAQGKYKSARAALTQAQIQVAEAKIRAPEDGRIISVTGVPGRLVGAGSEIIRLSAGEPEVHFKVPSSSSWTVGDRADVGVSVSQNSQSVHAVIKEIGAVDDSSQMQDVKLKLDHSLPLAVDSLVTIVLVPHEVSHAVRVPLTALISEDQDHAHLWGLTEEQEPHLVLRRVQIVGLRGADALVEGLTAGERIVTNNDESFKSDEPVHVVSQASEG
>NZ_CP022699.1|WP_167385512.1|3335801_3338837_-|efflux-RND-transporter-permease-subunit
MERFNVSRWAVGHPALVSFMMACLFLAGGYAFFHLGRAEDPAFTLKNMVVSAQWPGASAQQMQKQVAEPLEQGLRDVEAIDILSTYCVSEACVTQVFLKDDERKDRVPVIWQQVRNKLSDLAPTLPSGVALAANDDYADVYGYVFALTGGENADLIKNAEYLKKIFQTIHGVGKVQISGEVPRQITVDIDPQQSAARGISLDQVAKALQNRSALASGGSVNFKTVVPLNVSGALDGVRSVENTPIAGRSGTVRVRDIAQVNRDYADPAPSLIRYGGRPAVVIAVAMADGADGLTLGKTLQKVAASAELPAGMMLTQVEDQSSVIREAVNTFLIKFVVALSVVLLVAFVSLGWKAGIIVACSVPLTLSGVSLYMGMDHIGLDRISLGALILSLGLLVDDAIISIEAMVVQLELGRSREEAASFAWSHTAFPMLTGTVLTVISFLPVGLAQSTTGEYAGEIFWVSGAALLFSWIVAVVFIPFLGVHLLPEPKSHMPVSYERRVRTMLRLILGTSLRYKKAVAGGTIALLFLACGGFLLVDQQFFPQSDRPEVIVDVAMPPGTALEETSGAVRILERRLAGSPSLRHMEAHIGDGAPRFYLPYAPATPSVTHATLLLVAQSLEAREDLIQQIEAMSLPVGVHLHVQRLSLGPTADFPVQYRILGPDPETLRAISHEVDEILRGTEGAVSVQADWGNRTPSLTLDADPEKLAYFQTDRVSVAAQLQAAISGEVAGDIPDGHHHIAVMVRAPRPVRSDPGQWKSLPITTGASVVPLGQLGAIRVTTDFPILWQRNGELCMTVQSGVATGVQPATVVQRSAAAIERLRGKLPAGYRIETGGDVELSSTADDAIFAFLPLTGGLMLLVLMIQLQSFSRSLLVLFSAPLGLIGMVSGLLVTGAPFGFVALLGLIALAGMIMRNTILLVDQIQFNHGNGVPLHDAIIEATLTRARPVCLTAVAAVLAFIPLSFNVFWGPMAIVMIGGLVGGAVLTLIAVPAFYALLFDRNAPVQKAPAHV
>NZ_CP022699.1|WP_086897077.1|3334348_3335809_-|efflux-transporter-outer-membrane-subunit
MSEKFFFICRRGMILFAVLFAMVGCAMGPDFVRPKPILPDHWQNADTVARSQPSSALWRGIFNDPVLNSLMRRAETGNLDMVLARERIRAARIQRRAASAESLPSLNGQAAYTHERLATAGVGQVLQPLLGLSPGIQGQEPEGVSYTNYSIGAVASWELDLWGRQRRLQEAAKAEFSAVQADMDAMHLSTQAEIARTYFQWLWVSDRLNQAEKKLERAENILRIDQAVHAHGLLASVDLGSQQALYHEAQGEKEELALKQASLHRALAVLTTGRPDAEIPELAKPANLLDVKIPKIALGIPSDIARNRPDIRAAEARLHAATATIGMAQADFYPQITLTGQISLDALTVAELGWNARNTSFGPTLSLPIFNGGRLSRQLELRRSEQRSAGLFYQNVVLSAWIEIENLLSYEKFFLSRYQSQLSLLKTGQARIDALGKQYQHGDISQRELLQASLLENAGEANLADTYVAFLINAVNLNTALGKNYL
>NZ_CP022699.1|WP_157772966.1|3333826_3334162_+|helix-turn-helix-domain-containing-protein
MDHRAYAEIAHVSVRALHRHIQDTAGLAPSEWLTQQPIACARDLLEETNLSIDEITPSYGFGTTTNFRQHCRTAIGLPPASNRYPFRHHDPTAMDLLSREPDTHFELTSKT
>NZ_CP022699.1|WP_086897079.1|3332382_3333687_-|MFS-transporter
MNNQLTLSVKEKMAYGCGDAASNMMWGMTSSYLMYYYTDIYGLPLSAVSWILLVARVVDAFCDPAIGYIVDRRGGLIVPRLIRILAIPFGITGFLCFLALPLSPTGKILWAGLTYIVFGAIYSCVNTPYGALAVMISHSATGRIGLNAFRMMGCQAGSLFVALLTIPAINWLGGGESVAQHRYGIAIYVLVLSVLGSILWLCVARGCSVRYPPAPVRQDLVDTLRHLFGNRQWVLSNLLAFFYFVGQAALFGFALYYAHVILGGTEQLGANIITFVTVLLFAGVPACLPLARRLGTVRAGLICLIAQGIAYLAMAVSGASMTYFFLSIALLALAQGVMSPLYYTLLAEAVDDGDPRTSTGSAGLAYSINTWVTKLAMGLTGFVLAQFLSQGHYVEAGVMQLPELSAWITAGFVWLPLGAVCMQSLCLLAWPGGE
>NZ_CP022699.1|WP_086897127.1|3331597_3332182_-|TetR/AcrR-family-transcriptional-regulator
MLRDEYAAQTRQRIIEAFIALLEESEDGSISTSALAKKAGVSLRTVYRYFPSRDHLLAATADWLNTEVFGLASQDDTDDVVKGFQIAAGKFDSRPDLARILALTRIGRSMRSTFRNELAVRRRKVLWRNTPDISASDRLRAEAVLACLDNVLSWLTLREEFGMDGKDIGATIGWAMELVLNETRRPTQAGKKKP
>NZ_CP022699.1|WP_086897080.1|3331406_3331598_-|hypothetical-protein
MSARPNRKSLALGLGVPFIAIVFVAPFLSCLSFTVFEIPVVFLWIFAWFPLTSLCLWLCERSI
>NZ_CP022699.1|WP_086897081.1|3330009_3331410_-|sodium:solute-symporter
MSGMIVSSVLLLSLGAAWLARVRSRHMSVETLLVADRALPAPMLFILTVGEIYSIGSIVAFPAGLYAHGVSYGYWFLGYLLLAFPVGYFVGPAIWRRAKQYNACTLPEVFGRHFGSIAFERLTAWACVIALVPWGQFQFIGLRSVLDTMGFSAAPAAGLAGCAVIAFAYVSLGGVRASTYVAFLKDVLMLFGIVAVGVGAIGMQYKLSAGHAVITTPTLPLPTGSSLVFAISTIIYQGVGFYFQPSVTPYLFTARSAQAVRRAMVFMPLYMVMYPFAVFATVFALRFLPSLPDPNAVFFHVAATLLPPWIVALAAAGALLAGLLVLAATSLNIAAMMTRNIAPGLGRRHPKRAINLAVILFLVLALVATAHAPAIMLTALNLSGYVGIQFASLWFLILTGWPVSARIAGLGLLSGAGVAIALFASGVSIGGINPGLIGFLVNCGIVFCPLWRSRSDVRVHNKKDLL
>NZ_CP022699.1|WP_086896820.1|3342602_3345902_+|hypothetical-protein
MSVTPDTVHRVLRSWIALEVLTPQATRESGWNDVAADREGRIRNRRTDATDGPDLWHPPRPDDSTPWPILPDPPPKPPIASVENDPKKPSESQTSKKERVKRRWYNVILGAMPTRASFERLNTAIGENDPDEEDKTDRSTKKGNVIAASVVLDEWGIIVPDTLAIASFAWGVGHILSGGSPSGLAEWDREAEDLQSRFADLLTPPGSGGQPRSLTWTDLHGVADELAEALCVPKDLWIPVPCVIESEKVNAPNGDLLSSFYLPDLGRALRDADTLPPALSAYLGLHPPTAPWDALTDRARLATLLSPDLFPLGRWPGPGLHPLTLLQQAAVNAVTRDLATEGLAAINGPPGTGKTTLLRDLVAQVMVARAEKLADIETPSEGVGDLDLMDFAIVVASSNNAAVENISLELPVREKALDESVWRDEGLDHFGHTATHLLGLKQDAEPAKRAWGLIAARLGRAKNRHQFFDRVWWNEEWGLNDWLNRAAWPNAQHLRERKPSKLAELDPPPRNPEAMVQWRKARDAFRQARDRSRRLRDELVALSRAGDALREAETELPRASEMREQFRLDHEAASRAAIAAQSQVDEADRLERLEATKLTALTSVQPSFLSKMLRTQAWKTHESEVREQVVRLEEAQRTTRDAKARLDIATVEEKQFGKRYTEAEGRLETLLAEAARVGQQLEDGRRELGDCFPGPGFWSQPDDLFQKSSPWNGGRFRLARDELFVAAIRLHHAFVAAGAQPLKRALNTVVNGSANASAQDWGYFFLLVPVVSSTFASIGRMFQTFREASIGWLLIDEAGQAAPQQAVGALWRARRAVVIGDPLQIEPVVTTPEYTTALIFQGNDLLAEPWAAPKVSAQVLADRASIIQGRFPIENPVSGGPMTRDTGMPLLVHRRCEKPMFDLANRIAYAERMVHATGIGRSAIRERLGPSAWIDVDAPSSGKWVEAEGQLITTAIAELCRMQPKGPDLYVISPFRVPAMRLRQLLTRTPGVLPALSQADREDWIERHVGTVHTFQGKEAEAVILMLGAGRGARPGSRTWAGGTPNLLNVAATRAKRVLYIVGNHEEWRGAGVFARAADSFPGISPEEWMGQKSLEAVS
>NZ_CP022699.1|WP_086896821.1|3346141_3346711_+|hypothetical-protein
MYDPTMHVRSIARQFQPGDFITNPTLLNEPDRKAVIANAVEIGANGFAAVAFLKSTLRGKEIYQVTDMAQLLVLRHVSKNIRRITGAKQDNRQFIIECVLTMLREGSSYRVYKFDIKSFYESANIDMILERLKNDEGFSGQSAVALSTFFTIAKAAGVSGLPRGLGLSATLAEYLLRPFDERMADMPHV
>NZ_CP022699.1|WP_086896822.1|3346813_3347377_+|hypothetical-protein
MFNQKSEVFDFEKYAKHQTGCAHTVDFLGYRFHVSRPLRSGDKGVVMRTVTLDIAPAKVRKLKTRIAKSLLRFSVDGNYVDLLSRFRLITGNFNFVDRATGIRRVSGIYFNYPHVDLASSEAIPDLDKFLRNMVMAPHPRNKIRPKLATAQRRELVRLTFRDGHEKKRFYAFGPTRLVELGSVWRHA
>NZ_CP022699.1|WP_157772967.1|3347369_3349349_+|RNA-directed-DNA-polymerase
MRKHVIAKGNIHRSDHLRALVTDTMPGDIPIIISNDGFYRNVKAGPHPNNEHRDFVKRLLESPKPYTKPYRYYITKGGRSSRKLSLIHPGGQLAIAKFYQEDGHLICYHSRKSKASIRSPDKIGSLFFVRGAYSERNKFKKSGIDTVDIETSVSNPASYFSYRGVTRAFKFFNSPQYISLEKKYSVMCLADISKCFHSIYTHTLYWATTDIETAKDNTNHYTFSNRFDRLMQSINFNETNGICVGAEVSRVFAELILSEVDKRIIARLTDKQLKWNIDYEFRRYVDDFFIFSKSENINSQILMAIEIELSNFNLHLNNEKTSLIRRPFVTEKSYLVHEADKALNSFFARFIVSSLAGDEGYGYSYPERLWRSESVFHIFLDDIKTSCFDKGCGYDAIGSYVIGALSARVTALISSFDRAIQREDAKPEDFVSAIGLLLEAIYFFYNVDPTISSSLRVAQSAIQSFDFFKNKIPDRMPFLREKIALWTYDFIKTCKDTGKFRSVEVVPLEAINLLLVLGEVGINEALVRKAIIDFCEPVDQLGYFEIVSYLFCVKNDPYFKDLRHALFKRAEAILLGGEDMRVDAQLTFLALDLLGCPYIDRSSRAKLFNKLRKQIGLAPVAVASAQTAVETFEHNGWFVQWDTTNLLHMIRKKELSSVY
>NZ_CP022699.1|WP_086896824.1|3352321_3352510_+|hypothetical-protein
MTDSPSQSLAPAYRPPKPELRLILKPDAPDPRLMALVRLIARRAARDWFRSQQQEQRRRSGP
>NZ_CP022699.1|WP_086896825.1|3352523_3354233_+|recombinase-family-protein
MKVALYARYSSDNQRDASIADQLCVCRTHAEKQGWTIVEEYTDHAISGSSLMRPGIQALIADAQRGRFAIVLAEAMDRLSRDQEDIAGVFKRMNYAGVRIVTLSEGEVSHLHVGLKGTMNALFLKDLAAKTHRGLRGRVELGKSGGGNAYGYDVVRKLDANGEPIRGDRTINVVEAEVVRRIFRDFASGLGPRAIAFRLNDEGISAPGSGAWGFSTITGNRARGTGILNNEMYVGKLVWNRQRFIKDPDTGKRQARPNPEAEWVIQEVPDLRIVDQELWNAVKARQPSVSASRDTRDTSSPDHFREKRRPRYLFSGLSKCGSCGGGYSMISGTLLGGSTARNKGTCDNRTNMRREELERRVLDALRHHLMDPDLFAEFCNTFTSEMNRLRMEASADISAAESELKRVERDIQRLMDLYLSEAISIETVKERGSKLEARKAELKEFLATAEAPPPLLHPQMAEFYHRQLARLHDMLHSELDEKRQEAAEVIRSLIEAIILTPSDKGLQIDVRGDLAGILTVASGSGQTKTPVRFGTGVGDALASQVQMVAGACNQRKLLLVSGFVERLAA
>NZ_CP022699.1|WP_014106242.1|3354293_3354704_-|tRNA(fMet)-specific-endonuclease-VapC
MLRYLLDTNLCIRVLRDRPQGLRPRFNSCAEELCISDVVLYELLYGAERSSDPVRTRREVERFAARLAVLPFDSEAAAHTADIRAELERNGRIIGPYDLMIAGHARSRGLIVVTGNLREFQRVEGLRTEDWLTDTV
>NZ_CP022699.1|WP_010511771.1|3354704_3354929_-|hypothetical-protein
MLTRTTLFLSNRSQAVRLPKMVAFGEQVRDVVIVSEGSRRIIAPADAAWDDFFAAPGVDLGERNQPAMQEREAL
>NZ_CP022699.1|WP_052051562.1|3355108_3355528_+|hypothetical-protein
MTDRPRTRSDAFARAEERGRHLTATILSGPDMLTGEIFAHRLGLTVSDLHDLEQAHAVLVLPESSPREARYPAWQIDATGQPFPVPPALFDMLGDSGWTIYRFLMQSHPELAGQTALEALRDGRVHWSSGLPTALRKEP
>NZ_CP022699.1|WP_014106240.1|3355753_3356650_-|NAD-dependent-epimerase/dehydratase-family-protein
MRLFVTGASGYIGGSFAAEAVRRGHDVRGLVRSAEKAAACAALGMVPVQGTLADRDLLIEEAQRADVVVNAASSDERDAVDTFLAALSGSGKAFLHTSGSSLVADHAEGEASEAIFDERHMPLPVAEKAPRVALDHAILTTPGIRSIILCNSLIYGKALGPTAHSVQLPLLVDYARENGCARYIGKGLNRWSTVHIADVVDLYFLALEQAPPATFVFVESGEASFRDMAQSIANALRLGEATSMTVEAAIKRWGRQRALYSLASNSRVRSLYSRAWGWKPNSADIHTWILNNISAENP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP022699_1	1.2\|516744\|26\|NZ_CP022699\|CRISPRCasFinder	516744-516769	26	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	134030-134055	5	0.808
NZ_CP022699_2	2.1\|3341861\|34\|NZ_CP022699\|CRISPRCasFinder	3341861-3341894	34	MG757157	Gordonia phage Flapper, complete genome	51614-51647	9	0.735
NZ_CP022699_2	2.2\|3341924\|32\|NZ_CP022699\|CRISPRCasFinder	3341924-3341955	32	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	136176-136207	10	0.688

1. spacer 1.2|516744|26|NZ_CP022699|CRISPRCasFinder matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 5, identity: 0.808

acaccaaagaagggtccgaaaaagcc	CRISPR spacer
ccaccatagaaggggccgaaaaagga	Protospacer
 ***** ******* *********

2. spacer 2.1|3341861|34|NZ_CP022699|CRISPRCasFinder matches to MG757157 (Gordonia phage Flapper, complete genome) position: , mismatch: 9, identity: 0.735

accctggctcgtcctcgtcgaacatga-gtatgat	CRISPR spacer
ggcctgggtcgtcctcggcgaacatggcgtgcgc-	Protospacer
. ***** ********* ********. **..*

3. spacer 2.2|3341924|32|NZ_CP022699|CRISPRCasFinder matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 10, identity: 0.688

cctgcccgtgtttctggaacgatgggccgaac	CRISPR spacer
tctgcgcgtgtttctggaatgatgcgtttgct	Protospacer
.**** *************.**** *.. . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

66948 : 108437

Pseudomonas_phage(15.0%)

plate,head,holin,tail,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086896614.1\|66948_69018_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_086896613.1\|69014_70259_+	hypothetical protein	NA	NA	NA	NA
WP_086896612.1\|70379_71459_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_086896611.1\|71565_72942_+	ethanolamine ammonia-lyase subunit EutB	NA	NA	NA	NA
WP_097802313.1\|72938_73694_+	ethanolamine ammonia-lyase subunit EutC	NA	NA	NA	NA
WP_086896609.1\|73690_75052_+	ethanolamine permease	NA	NA	NA	NA
WP_140385794.1\|75412_75952_-	hypothetical protein	NA	NA	NA	NA
WP_086897553.1\|76023_76791_-	hypothetical protein	A0A0M3LPF9	Mannheimia_phage	1.0e-10	30.5
WP_086897552.1\|76998_77304_+	hypothetical protein	NA	NA	NA	NA
WP_086897551.1\|77300_78131_+	ParB N-terminal domain-containing protein	R9U496	Rhizobium_phage	7.6e-28	35.9
WP_086897550.1\|78127_78406_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_086897549.1\|78402_78858_+	hypothetical protein	A0A0A1IVF5	Pseudomonas_phage	1.3e-08	29.3
WP_086897548.1\|78857_80816_+	hypothetical protein	A0A1B1P6Z4	Rhodovulum_phage	4.3e-138	43.1
WP_086897547.1\|80841_81840_+	AAA family ATPase	A0A2P9JZG8	Alteromonadaceae_phage	5.5e-49	34.7
WP_140385793.1\|81846_82062_+	hypothetical protein	NA	NA	NA	NA
WP_086897545.1\|82058_82709_+\|transposase	transposase	NA	NA	NA	NA
WP_086897544.1\|82708_82996_+	hypothetical protein	NA	NA	NA	NA
WP_086897543.1\|82995_83250_+	hypothetical protein	NA	NA	NA	NA
WP_086897542.1\|83246_83555_+	hypothetical protein	NA	NA	NA	NA
WP_086897541.1\|83551_83854_+	hypothetical protein	NA	NA	NA	NA
WP_086897540.1\|83863_84490_+	DUF3164 family protein	NA	NA	NA	NA
WP_086897539.1\|84486_84780_+	hypothetical protein	A2I2Z3	Vibrio_virus	2.1e-09	45.3
WP_086897538.1\|84776_85085_+	hypothetical protein	A0A2K8HLR2	Pseudomonas_phage	1.2e-18	50.5
WP_086897537.1\|85081_85408_+	hypothetical protein	NA	NA	NA	NA
WP_157772881.1\|85404_85839_+	DUF1018 domain-containing protein	F8TVB3	EBPR_siphovirus	4.7e-13	39.5
WP_086897535.1\|85835_86102_+	hypothetical protein	NA	NA	NA	NA
WP_052051272.1\|86253_86631_+	hypothetical protein	NA	NA	NA	NA
WP_086897534.1\|86693_87404_+	hypothetical protein	A0A191ZDK6	Acinetobacter_phage	1.6e-18	31.6
WP_140385791.1\|87535_87907_+	hypothetical protein	NA	NA	NA	NA
WP_035379150.1\|87911_88211_+	hypothetical protein	NA	NA	NA	NA
WP_140385789.1\|88207_88399_+	hypothetical protein	NA	NA	NA	NA
WP_086897532.1\|88395_88701_+	hypothetical protein	NA	NA	NA	NA
WP_086897531.1\|88704_89268_+	DUF3486 family protein	A0A2I7S9D1	Vibrio_phage	3.7e-10	28.9
WP_086897558.1\|89330_90848_+	hypothetical protein	Q6QIC1	Burkholderia_phage	4.6e-124	52.9
WP_086897530.1\|90844_91087_+	hypothetical protein	NA	NA	NA	NA
WP_140385787.1\|91092_91341_+	hypothetical protein	NA	NA	NA	NA
WP_086897528.1\|91344_93069_+	DUF935 family protein	M4SPR8	Rhodobacter_phage	3.1e-76	32.0
WP_086897527.1\|93061_94255_+	hypothetical protein	J9SWK6	Pseudomonas_phage	4.7e-39	33.5
WP_086897526.1\|94383_94902_+	phage virion morphogenesis protein	A0A219VH84	Ochrobactrum_phage	2.1e-15	34.0
WP_086897525.1\|95095_96109_+	hypothetical protein	M4SNT6	Rhodobacter_phage	1.2e-32	48.8
WP_086897524.1\|96111_96561_+	hypothetical protein	NA	NA	NA	NA
WP_086897523.1\|96569_97520_+\|head	head protein	A0A1B1P742	Rhodovulum_phage	3.0e-60	41.2
WP_086897522.1\|97521_97788_+	hypothetical protein	NA	NA	NA	NA
WP_086897521.1\|97791_98214_+	DUF1320 domain-containing protein	A0A1B0T6F3	Thiobacimonas_phage	1.9e-06	31.6
WP_157772882.1\|98159_98825_+	hypothetical protein	NA	NA	NA	NA
WP_086897519.1\|98821_99028_+	hypothetical protein	NA	NA	NA	NA
WP_086897518.1\|99024_100512_+	hypothetical protein	A0A0C4UQS0	Shigella_phage	4.0e-35	29.5
WP_086897517.1\|100513_100873_+	hypothetical protein	NA	NA	NA	NA
WP_086897516.1\|100872_101208_+	hypothetical protein	NA	NA	NA	NA
WP_086897515.1\|101346_103482_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_086897514.1\|103478_104903_+	hypothetical protein	NA	NA	NA	NA
WP_086897513.1\|104899_106249_+	hypothetical protein	F6MIL3	Haemophilus_phage	2.0e-06	23.9
WP_157772883.1\|106257_106836_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_086897511.1\|106893_107367_+	hypothetical protein	NA	NA	NA	NA
WP_086897510.1\|107363_108437_+\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	7.3e-15	29.7

DBSCAN-SWA_2

357644 : 383885

Staphylococcus_phage(40.0%)

holin,integrase,transposase

attL 362667:362692|attR 389190:389215

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035382474.1\|357644_358070_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_006560365.1\|358108_358411_-	hypothetical protein	NA	NA	NA	NA
WP_167385441.1\|358478_359603_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_086898013.1\|359749_360739_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_140385855.1\|360873_361218_+	hypothetical protein	NA	NA	NA	NA
WP_086898015.1\|361222_361744_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_086898016.1\|361786_362503_+	DUF45 domain-containing protein	NA	NA	NA	NA
362667:362692	attL	NA	NA	NA	NA
WP_086898017.1\|362780_364154_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_086898019.1\|364422_365265_-	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_053323893.1\|365802_366993_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_006560376.1\|367012_367924_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	5.2e-22	27.4
WP_140385849.1\|367995_368292_-	hypothetical protein	NA	NA	NA	NA
WP_097802320.1\|368296_368995_-	hypothetical protein	NA	NA	NA	NA
WP_086897922.1\|369268_369613_-	endoribonuclease MazF	Q708N9	Streptococcus_phage	2.9e-05	42.0
WP_086897921.1\|369609_369852_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_097802517.1\|371226_371787_+\|integrase	tyrosine-type recombinase/integrase	A0A0E3Y5J2	Fusobacterium_phage	2.7e-05	27.3
WP_086897919.1\|371948_375050_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_086897918.1\|375042_376203_-	AAA family ATPase	NA	NA	NA	NA
WP_086897917.1\|376203_377469_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	5.1e-07	30.4
WP_086897916.1\|377465_379013_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.5e-106	42.7
WP_086897915.1\|379009_379201_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_086897914.1\|379801_380191_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_086897930.1\|380960_382004_+	hypothetical protein	NA	NA	NA	NA
WP_086897913.1\|382253_383885_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
389190:389215	attR	NA	NA	NA	NA

DBSCAN-SWA_3

877756 : 885581

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035378766.1\|877756_878509_+	phage antirepressor KilAC domain-containing protein	A0A2P1JTZ2	Anoxybacillus_phage	4.5e-27	31.5
WP_035378782.1\|878517_879114_+	hypothetical protein	NA	NA	NA	NA
WP_086897846.1\|879100_880168_+	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	4.3e-07	31.5
WP_086897845.1\|880136_882056_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	3.9e-51	32.1
WP_039905113.1\|882283_882853_+	recombinase family protein	M9Q1K0	Clostridium_phage	3.7e-26	43.0
WP_086897031.1\|883878_884787_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	4.6e-18	39.9
WP_006557795.1\|884789_885581_-	ParA family protein	Q8JL10	Natrialba_phage	3.6e-19	36.3

DBSCAN-SWA_4

1502664 : 1512801

Brucella_phage(85.71%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086896662.1\|1502664_1503507_+	hypothetical protein	X2CY04	Brucella_phage	3.7e-22	54.7
WP_086896663.1\|1503487_1503673_+	hypothetical protein	NA	NA	NA	NA
WP_157772908.1\|1503669_1505433_+	hypothetical protein	NA	NA	NA	NA
WP_086898591.1\|1505539_1505899_+	hypothetical protein	NA	NA	NA	NA
WP_086898590.1\|1505895_1507068_+	hypothetical protein	X2CY95	Brucella_phage	1.8e-19	33.6
WP_086898589.1\|1507085_1508111_+\|capsid	phage major capsid protein	A0A0H4IR21	Brucella_phage	2.4e-92	51.0
WP_097802375.1\|1508114_1508405_+	hypothetical protein	NA	NA	NA	NA
WP_086898597.1\|1508487_1509165_+	hypothetical protein	X2CXR4	Brucella_phage	1.9e-40	41.3
WP_086898587.1\|1509167_1509851_+	hypothetical protein	X2CYK7	Brucella_phage	4.8e-36	35.3
WP_086898586.1\|1509847_1511671_+	hypothetical protein	X2CY96	Brucella_phage	8.9e-106	38.2
WP_086898585.1\|1511809_1511989_-	hypothetical protein	NA	NA	NA	NA
WP_140385981.1\|1512039_1512801_-	hypothetical protein	A0A2H4IZE1	uncultured_Caudovirales_phage	1.3e-10	32.9

DBSCAN-SWA_5

1633751 : 1641818

Aeromonas_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086897429.1\|1633751_1634087_+	hypothetical protein	K4I3B0	Acinetobacter_phage	2.7e-08	37.6
WP_157772914.1\|1634202_1634346_-	hypothetical protein	NA	NA	NA	NA
WP_086897430.1\|1634400_1635375_+	hypothetical protein	H9C0X5	Aeromonas_phage	3.9e-23	31.6
WP_058987269.1\|1635374_1636028_+	hypothetical protein	Q2NPA1	Xanthomonas_phage	2.0e-31	45.3
WP_086897431.1\|1636152_1638270_-	catalase	A0A2K9L0T1	Tupanvirus	1.0e-137	49.5
WP_058987267.1\|1638576_1638930_+	hypothetical protein	NA	NA	NA	NA
WP_086897432.1\|1638916_1640176_+	hypothetical protein	A0A2R3UAL9	Myoviridae_environmental_samples	5.5e-62	40.1
WP_058987265.1\|1640175_1640745_+	DUF2612 domain-containing protein	H9C0Y0	Aeromonas_phage	6.6e-31	41.1
WP_086897433.1\|1640747_1641818_+	hypothetical protein	A0A077KC23	Edwardsiella_phage	4.0e-13	33.3

DBSCAN-SWA_6

1765588 : 1781001

Azospirillum_phage(40.0%)

head,portal,terminase,protease,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097802394.1\|1765588_1770946_-\|tail	phage tail protein	NA	NA	NA	NA
WP_097802395.1\|1770945_1771587_-	hypothetical protein	F8TVA4	EBPR_siphovirus	1.6e-17	31.2
WP_086896747.1\|1771590_1771965_-	hypothetical protein	NA	NA	NA	NA
WP_086896748.1\|1771964_1772426_-	hypothetical protein	NA	NA	NA	NA
WP_086896749.1\|1772504_1773809_-\|tail	phage tail protein	NA	NA	NA	NA
WP_086896750.1\|1773894_1774356_-	hypothetical protein	NA	NA	NA	NA
WP_086896751.1\|1774352_1774796_-	hypothetical protein	NA	NA	NA	NA
WP_086898355.1\|1774795_1775113_-	hypothetical protein	NA	NA	NA	NA
WP_140385915.1\|1775109_1775757_-	hypothetical protein	NA	NA	NA	NA
WP_086898353.1\|1775722_1775968_-	hypothetical protein	NA	NA	NA	NA
WP_086898352.1\|1776019_1777321_-\|capsid	phage major capsid protein	A0A1B5FPI9	Escherichia_phage	2.6e-91	44.8
WP_052051553.1\|1777345_1778044_-\|head,protease	HK97 family phage prohead protease	B0VK32	Azospirillum_phage	4.4e-45	51.0
WP_052051552.1\|1778066_1779314_-\|portal	phage portal protein	B0VK31	Azospirillum_phage	6.0e-77	41.3
WP_086898357.1\|1779345_1781001_-\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	1.2e-125	44.3

DBSCAN-SWA_7

1795214 : 1817208

Rhodobacter_phage(20.0%)

portal,terminase,capsid,integrase,transposase

attL 1793088:1793101|attR 1801513:1801526

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1793088:1793101	attL	NA	NA	NA	NA
WP_086898888.1\|1795214_1796279_+\|integrase	tyrosine-type recombinase/integrase	A0A291AUF0	Sinorhizobium_phage	1.2e-46	34.8
WP_086898889.1\|1798450_1799458_+\|integrase	site-specific integrase	A0A1B1P9F9	Acinetobacter_phage	3.5e-51	37.8
WP_157772925.1\|1799686_1800202_-	hypothetical protein	NA	NA	NA	NA
WP_157772926.1\|1800207_1800372_-	hypothetical protein	NA	NA	NA	NA
WP_086898891.1\|1800571_1800835_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_086898892.1\|1800852_1801083_-	hypothetical protein	NA	NA	NA	NA
WP_086898893.1\|1801111_1801366_-	hypothetical protein	NA	NA	NA	NA
WP_097802399.1\|1801362_1801698_-	hypothetical protein	NA	NA	NA	NA
1801513:1801526	attR	NA	NA	NA	NA
WP_086898292.1\|1801694_1802114_-	hypothetical protein	NA	NA	NA	NA
WP_157772927.1\|1802262_1802553_+	superinfection immunity protein	A0A0S2SY85	Pseudomonas_phage	1.2e-07	50.0
WP_157772928.1\|1802544_1803327_-	hypothetical protein	NA	NA	NA	NA
WP_140385994.1\|1803514_1804918_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	4.7e-30	34.2
WP_086898289.1\|1805005_1805470_+	hypothetical protein	NA	NA	NA	NA
WP_086898288.1\|1805469_1805958_+	hypothetical protein	NA	NA	NA	NA
WP_086898287.1\|1805957_1806242_+	hypothetical protein	NA	NA	NA	NA
WP_097802400.1\|1806231_1806417_+	hypothetical protein	NA	NA	NA	NA
WP_097802401.1\|1806409_1806607_+	hypothetical protein	NA	NA	NA	NA
WP_086898727.1\|1806599_1807019_+	hypothetical protein	NA	NA	NA	NA
WP_086898726.1\|1807021_1807594_+	hypothetical protein	NA	NA	NA	NA
WP_086898725.1\|1807586_1809116_+	helicase	O80281	Escherichia_phage	1.8e-46	30.5
WP_086898724.1\|1809112_1809400_+	hypothetical protein	NA	NA	NA	NA
WP_086898723.1\|1809402_1810341_+	hypothetical protein	NA	NA	NA	NA
WP_097802402.1\|1810337_1810829_+	hypothetical protein	NA	NA	NA	NA
WP_086898534.1\|1810892_1811213_+	HNH endonuclease	NA	NA	NA	NA
WP_086898535.1\|1811428_1811902_+\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	5.8e-17	33.6
WP_086898536.1\|1811908_1813639_+\|terminase	terminase large subunit	A0A141GEV8	Brucella_phage	5.2e-156	49.7
WP_086898537.1\|1813645_1814920_+\|portal	phage portal protein	I3ULZ7	Rhodobacter_phage	4.6e-109	50.4
WP_086898538.1\|1814924_1815881_+	S49 family peptidase	I3ULZ8	Rhodobacter_phage	5.8e-64	47.4
WP_086898539.1\|1815882_1817208_+\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	4.6e-59	37.3

DBSCAN-SWA_8

2570914 : 2631409

Erwinia_phage(10.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006557057.1\|2570914_2571520_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_006557058.1\|2571519_2572833_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A2H5BJT2	Erwinia_phage	1.8e-44	30.6
WP_086896701.1\|2572832_2573279_+	SufE family protein	NA	NA	NA	NA
WP_086896700.1\|2573466_2574579_+	hypothetical protein	NA	NA	NA	NA
WP_086896699.1\|2575037_2577362_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_006557063.1\|2577354_2577831_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_039903083.1\|2577851_2579180_-	cytochrome c	NA	NA	NA	NA
WP_086896698.1\|2579561_2581037_-	mannitol dehydrogenase family protein	G9E6E2	Micromonas_pusilla_virus	2.4e-48	29.0
WP_006557067.1\|2581495_2581699_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_006557068.1\|2581713_2582073_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_035382384.1\|2582279_2583350_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	7.0e-26	35.2
WP_086896697.1\|2583353_2585813_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_086896718.1\|2585925_2586921_+	phosphate ABC transporter substrate-binding protein PstS	E3SM63	Prochlorococcus_phage	1.5e-38	36.0
WP_097802445.1\|2587315_2588395_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_157772947.1\|2588459_2588780_-	DUF3325 family protein	NA	NA	NA	NA
WP_086896695.1\|2588779_2590246_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_086896694.1\|2590242_2590539_-	hypothetical protein	NA	NA	NA	NA
WP_086896716.1\|2591054_2592623_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_140385707.1\|2592804_2593062_-	hypothetical protein	NA	NA	NA	NA
WP_039903094.1\|2593203_2594652_-	class II fumarate hydratase	NA	NA	NA	NA
WP_006557081.1\|2594998_2597617_+	cyclic nucleotide-binding domain-containing protein	A0A2H4J178	uncultured_Caudovirales_phage	5.2e-06	27.3
WP_061488941.1\|2597708_2598263_-	HdeD family acid-resistance protein	NA	NA	NA	NA
WP_039903125.1\|2598625_2599243_+	30S ribosomal protein S4	NA	NA	NA	NA
WP_039903097.1\|2599345_2600893_+	peptide chain release factor 3	E4ZFJ7	Streptococcus_phage	5.9e-34	29.4
WP_006557086.1\|2601252_2602431_+	hypothetical protein	NA	NA	NA	NA
WP_086896715.1\|2602930_2604088_-	MFS transporter	NA	NA	NA	NA
WP_086896714.1\|2604138_2604855_-	NUDIX hydrolase	NA	NA	NA	NA
WP_006557089.1\|2604980_2606012_-	isocitrate dehydrogenase	NA	NA	NA	NA
WP_086896693.1\|2606106_2607891_-	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	4.1e-87	34.5
WP_086896692.1\|2607975_2608887_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_086896713.1\|2608886_2611052_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	3.8e-103	36.1
WP_061472404.1\|2611166_2611979_+	RadC family protein	NA	NA	NA	NA
WP_086896712.1\|2612020_2612758_+	DNA repair protein RadC	NA	NA	NA	NA
WP_086896691.1\|2612779_2613985_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_086896690.1\|2613981_2614521_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.1e-17	41.3
WP_006557097.1\|2614554_2614761_-	DUF465 domain-containing protein	NA	NA	NA	NA
WP_081473503.1\|2614995_2615160_+	DUF465 domain-containing protein	NA	NA	NA	NA
WP_039903101.1\|2615225_2615828_-	DUF1013 domain-containing protein	NA	NA	NA	NA
WP_086896689.1\|2616037_2616550_-	Hsp20 family protein	A0A218MMV3	uncultured_virus	8.8e-19	36.9
WP_006557103.1\|2616747_2616975_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_086896688.1\|2616971_2617220_-	hypothetical protein	NA	NA	NA	NA
WP_006557105.1\|2617254_2617713_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_086896687.1\|2617762_2618134_+	hypothetical protein	NA	NA	NA	NA
WP_167385503.1\|2618362_2619472_+	hypothetical protein	NA	NA	NA	NA
WP_086896685.1\|2619713_2620793_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157772948.1\|2621246_2622380_-	hypothetical protein	NA	NA	NA	NA
WP_097802447.1\|2624567_2625572_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_157772949.1\|2626770_2628327_-	glycosyltransferase family 92 protein	NA	NA	NA	NA
WP_157772950.1\|2629875_2630325_+\|transposase	transposase	NA	NA	NA	NA
WP_167385453.1\|2630651_2631409_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2892270 : 2906211

Aeromonas_phage(27.27%)

capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086897002.1\|2892270_2894199_-	lytic transglycosylase domain-containing protein	H9C0W9	Aeromonas_phage	5.9e-15	25.2
WP_140385742.1\|2894282_2894579_-	hypothetical protein	NA	NA	NA	NA
WP_086897000.1\|2895182_2895623_-	hypothetical protein	NA	NA	NA	NA
WP_086896999.1\|2895625_2896777_-	DUF3383 family protein	Q8HAQ4	Burkholderia_phage	7.0e-40	35.8
WP_140385740.1\|2896783_2897350_-	hypothetical protein	NA	NA	NA	NA
WP_086896997.1\|2897301_2897685_-	hypothetical protein	Q2NPC8	Xanthomonas_phage	1.5e-10	31.7
WP_086896996.1\|2897681_2898260_-	hypothetical protein	A0A1X9SFJ7	Acinetobacter_phage	4.3e-14	33.1
WP_086896995.1\|2898250_2898667_-	DUF4054 domain-containing protein	H9C0W0	Aeromonas_phage	6.3e-15	41.4
WP_086896994.1\|2898677_2899025_-	hypothetical protein	NA	NA	NA	NA
WP_086896993.1\|2899028_2900066_-	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	5.9e-78	46.2
WP_086896992.1\|2900065_2900566_-	hypothetical protein	A0A220NQI9	Acinetobacter_phage	3.6e-25	43.2
WP_086896991.1\|2901922_2902747_-\|capsid	minor capsid protein	A0A077KGU5	Edwardsiella_phage	1.5e-39	38.0
WP_097802460.1\|2902743_2904270_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	8.6e-94	43.1
WP_086898443.1\|2904278_2905724_-\|terminase	phage terminase large subunit	A0A1X9SGU8	Bradyrhizobium_phage	1.0e-120	48.9
WP_086898444.1\|2905686_2906211_-\|terminase	terminase small subunit	A0A0M3LSU1	Mannheimia_phage	3.0e-22	48.3

DBSCAN-SWA_10

3002822 : 3066818

Paenibacillus_phage(12.5%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167385453.1\|3002822_3003579_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_167385506.1\|3004204_3005479_+	DUF1800 domain-containing protein	NA	NA	NA	NA
WP_086898556.1\|3005483_3006695_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_086898555.1\|3006753_3007458_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_140385966.1\|3007601_3008378_+	hypothetical protein	NA	NA	NA	NA
WP_086898553.1\|3008517_3010989_+	TonB-dependent receptor	NA	NA	NA	NA
WP_086898552.1\|3011052_3012543_+	NCS1 family nucleobase:cation symporter-1	NA	NA	NA	NA
WP_167385507.1\|3013318_3021808_+	glycosyl transferase	NA	NA	NA	NA
WP_097802470.1\|3024614_3025377_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.0e-12	32.3
WP_086897559.1\|3025694_3026312_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_086897555.1\|3026437_3027979_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	2.9e-25	23.4
WP_086897556.1\|3028470_3029061_-	hypothetical protein	NA	NA	NA	NA
WP_086897557.1\|3029097_3029790_-	hypothetical protein	NA	NA	NA	NA
WP_167385453.1\|3029980_3030738_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_097802553.1\|3030847_3031717_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_086897440.1\|3031815_3032220_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_157772957.1\|3033422_3034196_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_086897443.1\|3034234_3035503_-	hypothetical protein	NA	NA	NA	NA
WP_086897444.1\|3035559_3036183_-	hypothetical protein	NA	NA	NA	NA
WP_167385469.1\|3036737_3036896_-	hypothetical protein	NA	NA	NA	NA
WP_089179463.1\|3037442_3038390_-	TIGR03571 family LLM class oxidoreductase	NA	NA	NA	NA
WP_086897452.1\|3038465_3039653_-	MFS transporter	NA	NA	NA	NA
WP_086897447.1\|3039845_3040769_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_086897448.1\|3041115_3041307_+	hypothetical protein	NA	NA	NA	NA
WP_164076295.1\|3041316_3041457_+	hypothetical protein	NA	NA	NA	NA
WP_086897449.1\|3041696_3042014_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_086897450.1\|3042615_3043320_-	hypothetical protein	NA	NA	NA	NA
WP_086897451.1\|3043368_3043836_-	hypothetical protein	NA	NA	NA	NA
WP_089179083.1\|3043860_3045046_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_086898728.1\|3045104_3045833_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	NA	NA	NA
WP_086898729.1\|3046008_3046761_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_086898730.1\|3047001_3048738_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_081938981.1\|3048985_3049651_-	lytic transglycosylase domain-containing protein	Q3T4W4	Enterobacteria_phage	7.5e-10	47.3
WP_035378658.1\|3049650_3050247_-	hypothetical protein	NA	NA	NA	NA
WP_035378660.1\|3050243_3050585_-	DUF736 domain-containing protein	NA	NA	NA	NA
WP_035378662.1\|3050631_3051261_-	S26 family signal peptidase	NA	NA	NA	NA
WP_035378664.1\|3051257_3051734_-	DUF2840 domain-containing protein	NA	NA	NA	NA
WP_035378666.1\|3051730_3052474_-	site-specific DNA-methyltransferase	O03956	Myxococcus_phage	5.2e-60	50.0
WP_157772959.1\|3052721_3053537_-	RepA replication protein	NA	NA	NA	NA
WP_081938982.1\|3053545_3053812_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_035378745.1\|3054023_3054665_-	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_035378669.1\|3054959_3055397_-	hypothetical protein	NA	NA	NA	NA
WP_164076296.1\|3055560_3055707_-	hypothetical protein	NA	NA	NA	NA
WP_035378674.1\|3056048_3056372_-	DUF736 domain-containing protein	NA	NA	NA	NA
WP_035378676.1\|3056390_3056606_-	hypothetical protein	NA	NA	NA	NA
WP_035378678.1\|3057103_3057550_-	hypothetical protein	NA	NA	NA	NA
WP_035378681.1\|3057546_3058482_-	DUF2493 domain-containing protein	NA	NA	NA	NA
WP_035378747.1\|3058839_3059901_-	DNA primase	A0A2I7R8M6	Vibrio_phage	2.9e-08	27.2
WP_035378682.1\|3059900_3064205_-	DEAD/DEAH box helicase family protein	A0A076FMQ0	Aureococcus_anophage	4.6e-36	26.7
WP_035378684.1\|3064403_3064679_+	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	8.6e-13	45.7
WP_035378686.1\|3064793_3065225_+	hypothetical protein	NA	NA	NA	NA
WP_097802310.1\|3065695_3066818_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.6e-52	42.5

DBSCAN-SWA_11

3354293 : 3408314

Stx2-converting_phage(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014106242.1\|3354293_3354704_-\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
WP_010511771.1\|3354704_3354929_-	hypothetical protein	NA	NA	NA	NA
WP_052051562.1\|3355108_3355528_+	hypothetical protein	NA	NA	NA	NA
WP_014106240.1\|3355753_3356650_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_052051561.1\|3356699_3357356_-	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A1X6WG33	Pacmanvirus	2.6e-15	38.0
WP_014106238.1\|3357549_3358659_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_014106237.1\|3358854_3359742_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_157772968.1\|3360074_3360686_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_035352878.1\|3360958_3362446_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_050856126.1\|3365612_3366629_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_014106232.1\|3367044_3367662_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_035352921.1\|3368036_3368633_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_035382359.1\|3368687_3369617_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014106229.1\|3369779_3370481_+	pirin family protein	NA	NA	NA	NA
WP_035382358.1\|3370711_3372163_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_089179083.1\|3373125_3374311_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_035382356.1\|3374553_3376191_-	MFS transporter	NA	NA	NA	NA
WP_164076300.1\|3376401_3377316_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014106224.1\|3377523_3378729_+	MFS transporter	NA	NA	NA	NA
WP_014106223.1\|3378863_3379226_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_123809134.1\|3379540_3379642_+	hypothetical protein	NA	NA	NA	NA
WP_035378536.1\|3379654_3380491_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_089179083.1\|3380701_3381888_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_035353783.1\|3382416_3384162_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_086898669.1\|3384409_3385075_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	6.5e-14	43.8
WP_086898668.1\|3385074_3385275_-	hypothetical protein	NA	NA	NA	NA
WP_086898667.1\|3385271_3385613_-	DUF736 domain-containing protein	NA	NA	NA	NA
WP_086898666.1\|3385667_3386297_-	S26 family signal peptidase	NA	NA	NA	NA
WP_086898665.1\|3386293_3386770_-	DUF2840 domain-containing protein	NA	NA	NA	NA
WP_086898664.1\|3386766_3387510_-	site-specific DNA-methyltransferase	O03956	Myxococcus_phage	1.4e-57	49.1
WP_157772579.1\|3387763_3388579_-	RepA replication protein	NA	NA	NA	NA
WP_123809135.1\|3388587_3388854_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_086898671.1\|3389067_3389721_-	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_086898661.1\|3389994_3390432_-	hypothetical protein	NA	NA	NA	NA
WP_162853394.1\|3390596_3390743_-	hypothetical protein	NA	NA	NA	NA
WP_035378674.1\|3391081_3391405_-	DUF736 domain-containing protein	NA	NA	NA	NA
WP_086898781.1\|3391423_3391639_-	hypothetical protein	NA	NA	NA	NA
WP_086898773.1\|3392178_3392754_-	hypothetical protein	NA	NA	NA	NA
WP_086898774.1\|3392913_3393849_-	DUF2493 domain-containing protein	NA	NA	NA	NA
WP_167385474.1\|3393829_3394144_-	hypothetical protein	NA	NA	NA	NA
WP_086898782.1\|3394163_3395225_-	DNA primase	NA	NA	NA	NA
WP_086898775.1\|3395224_3399529_-	DEAD/DEAH box helicase family protein	A0A076FMQ0	Aureococcus_anophage	1.9e-29	25.4
WP_086898776.1\|3399726_3400002_+	HU family DNA-binding protein	M4SRV7	Rhodobacter_phage	1.1e-12	45.7
WP_086898783.1\|3400268_3400823_+	hypothetical protein	NA	NA	NA	NA
WP_086898777.1\|3400823_3401438_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_075594769.1\|3401764_3402148_+\|transposase	transposase	NA	NA	NA	NA
WP_019092242.1\|3402144_3402492_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	9.5e-33	59.8
WP_086898778.1\|3402557_3404126_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.5e-104	45.2
WP_086898779.1\|3404648_3405059_-	hypothetical protein	NA	NA	NA	NA
WP_086898780.1\|3405139_3406321_-	DUF932 domain-containing protein	A0A1V0DX75	Synechococcus_virus	1.7e-73	40.9
WP_167385475.1\|3406319_3406460_+	hypothetical protein	NA	NA	NA	NA
WP_089179083.1\|3407127_3408314_-\|transposase	IS3 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP022700

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1104 : 61842

uncultured_virus(18.75%)

transposase,integrase

attL 1047:1106|attR 48403:49718

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1047:1106	attL	NA	NA	NA	NA
WP_061470237.1\|1104_2328_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.4e-38	42.2
WP_086898523.1\|4200_5274_-	alkene reductase	NA	NA	NA	NA
WP_157772978.1\|5429_6455_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_086898812.1\|6377_6836_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_086898813.1\|7521_8052_+	DUF2867 domain-containing protein	NA	NA	NA	NA
WP_035379786.1\|8355_8652_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_086898344.1\|8648_8990_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_086898345.1\|9212_9689_-	hypothetical protein	NA	NA	NA	NA
WP_086898346.1\|9913_10651_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_097802560.1\|10640_13709_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	1.7e-56	27.4
WP_167385521.1\|13754_14987_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_086898349.1\|14986_17428_-	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	9.0e-69	35.0
WP_053323893.1\|17955_19146_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_006560376.1\|19165_20077_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	5.2e-22	27.4
WP_086898207.1\|20386_21895_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_082823252.1\|22338_23433_+	plasmid replication protein	NA	NA	NA	NA
WP_086898206.1\|23429_24437_-	plasmid partitioning protein RepB	A0A240F4U0	Ochrobactrum_phage	2.9e-50	36.9
WP_063355056.1\|24488_25691_-	plasmid partitioning protein RepA	A0A240F4U1	Ochrobactrum_phage	1.1e-144	65.1
WP_097802562.1\|26236_31372_+	DEAD/DEAH box helicase family protein	I6NW45	Burkholderia_virus	0.0e+00	39.1
WP_086898204.1\|31559_33464_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_157772979.1\|33468_33879_-	hypothetical protein	NA	NA	NA	NA
WP_086898203.1\|33998_35222_-	hypothetical protein	A0A1L5C2A4	Pseudoalteromonas_phage	9.5e-11	30.3
WP_167385520.1\|35319_35637_+	hypothetical protein	NA	NA	NA	NA
WP_157772980.1\|36388_36553_+	hypothetical protein	NA	NA	NA	NA
WP_086898200.1\|36575_37481_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	3.9e-54	39.4
WP_086898209.1\|37682_37868_+	hypothetical protein	A0A1B1P707	Rhodovulum_phage	5.8e-05	57.8
WP_086898199.1\|37911_38301_+	hypothetical protein	NA	NA	NA	NA
WP_086898198.1\|38563_38959_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	1.2e-15	39.7
WP_140385889.1\|38992_39208_+	hypothetical protein	NA	NA	NA	NA
WP_167385525.1\|39417_40596_+	DUF3991 domain-containing protein	NA	NA	NA	NA
WP_140385887.1\|40855_41290_+	hypothetical protein	NA	NA	NA	NA
WP_097802575.1\|41808_42150_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_097802564.1\|42171_43344_+	ATP-binding domain-containing protein	A7KV33	Bacillus_phage	1.6e-39	32.0
WP_167385522.1\|43411_43699_-	hypothetical protein	NA	NA	NA	NA
WP_167385523.1\|43732_44437_+	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	6.7e-17	31.1
WP_086898772.1\|46283_47498_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	4.5e-37	41.8
WP_061470237.1\|48460_49684_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.4e-38	42.2
WP_157772982.1\|49612_52222_-	hypothetical protein	NA	NA	NA	NA
48403:49718	attR	NA	NA	NA	NA
WP_086898761.1\|52218_52767_-	hypothetical protein	NA	NA	NA	NA
WP_086898760.1\|52928_53849_+\|transposase	transposase	NA	NA	NA	NA
WP_140386035.1\|53936_54440_-	hypothetical protein	NA	NA	NA	NA
WP_097802358.1\|54655_55615_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_086897738.1\|56125_56740_+	hypothetical protein	NA	NA	NA	NA
WP_140385814.1\|56736_57111_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_086897737.1\|57171_57807_+	hypothetical protein	NA	NA	NA	NA
WP_167385524.1\|57761_58340_-	NERD domain-containing protein	NA	NA	NA	NA
WP_086897735.1\|58363_58630_-	hypothetical protein	NA	NA	NA	NA
WP_140385812.1\|58921_59668_+	hypothetical protein	NA	NA	NA	NA
WP_097802567.1\|59835_60489_+	hypothetical protein	NA	NA	NA	NA
WP_086897732.1\|60657_61842_+\|transposase	transposase	I4AZI9	Saccharomonospora_phage	2.0e-58	39.0

DBSCAN-SWA_2

144388 : 149913

uncultured_Caudovirales_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086898768.1\|144388_144868_-	hypothetical protein	A0A2H4PFW0	Mycobacterium_phage	5.5e-15	42.1
WP_086898769.1\|145056_145971_+	hypothetical protein	A0A2H4J8H9	uncultured_Caudovirales_phage	8.9e-38	37.0
WP_086898153.1\|146387_147467_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	6.7e-77	54.4
WP_086898152.1\|147475_148174_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.3e-83	69.7
WP_086898151.1\|148195_149491_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	5.5e-134	60.2
WP_086898150.1\|149490_149913_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	67.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP022699

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP022700

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection