CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP023958	Escherichia coli strain FDAARGOS_448 plasmid unnamed4, complete sequence	0 crisprs	NA	0	0
NZ_CP023957	Escherichia coli strain FDAARGOS_448 plasmid unnamed3, complete sequence	0 crisprs	RT	0	0
NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	0 crisprs	NA	0	1
NZ_CP023959	Escherichia coli strain FDAARGOS_448 plasmid unnamed1, complete sequence	0 crisprs	csa3	0	1
NZ_CP023960	Escherichia coli strain FDAARGOS_448 chromosome, complete genome	3 crisprs	cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	5	10

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 94149

108

Escherichia_phage(61.54%)

head,integrase,terminase,holin,tail

attL 35984:36000|attR 91390:91406

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000175491.1\|331_697_-	hypothetical protein	A0A1B0V846	Salmonella_phage	9.3e-47	98.3
WP_032333432.1\|693_2613_-	phage protein DarA	A0A1B0V7H1	Salmonella_phage	0.0e+00	98.6
WP_032333430.1\|2614_3217_-	hypothetical protein	Q1MVM6	Enterobacteria_phage	1.2e-99	99.5
WP_000580776.1\|3203_3647_-	hypothetical protein	A0A077SK09	Escherichia_phage	1.3e-82	100.0
WP_000887652.1\|3643_3973_-\|holin	holin	Q37876	Escherichia_phage	1.3e-52	100.0
WP_000145199.1\|4047_4311_-	hypothetical protein	Q71TD9	Escherichia_phage	1.1e-22	67.1
WP_001165547.1\|4746_5319_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.4e-83	85.0
WP_071961622.1\|5390_5888_+\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.9e-50	60.1
WP_000503756.1\|5898_6396_+\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	9.1e-45	59.1
WP_000367942.1\|6401_7013_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	3.6e-83	78.6
WP_071961623.1\|7012_7471_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.4e-44	57.4
WP_071991362.1\|7481_7958_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	1.9e-47	59.4
WP_001703197.1\|7968_8472_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	3.5e-44	54.7
WP_032333521.1\|8482_8944_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	2.2e-53	68.3
WP_032245979.1\|8954_9440_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	5.8e-36	50.6
WP_099004489.1\|9468_12318_-\|tail	tail fiber protein	A0A1B0V7G4	Salmonella_phage	2.8e-13	44.7
WP_001286325.1\|12329_12764_-	hypothetical protein	A0A077SLL3	Escherichia_phage	7.4e-75	99.3
WP_001189832.1\|12842_13679_-	hypothetical protein	A0A1B0V7F2	Salmonella_phage	1.4e-154	100.0
WP_000047923.1\|13678_15112_-	bleomycin hydrolase	A0A1B0VAD6	Salmonella_phage	3.7e-272	100.0
WP_000002797.1\|15108_15465_-	hypothetical protein	Q71TP1	Escherichia_phage	6.5e-61	99.2
WP_033560574.1\|15464_19190_-	transglycosylase SLT domain-containing protein	A0A1B0VDM8	Salmonella_phage	0.0e+00	85.8
WP_000926342.1\|19271_20153_-	hypothetical protein	Q71TC9	Escherichia_phage	2.7e-172	98.6
WP_000523980.1\|20167_20779_-	hypothetical protein	Q71TN8	Escherichia_phage	2.9e-109	99.5
WP_023153778.1\|20789_21356_-	hypothetical protein	Q1MVL0	Enterobacteria_phage	1.1e-99	99.5
WP_032192786.1\|21586_22480_+	DUF4760 domain-containing protein	A0A1B5FPC5	Escherichia_phage	3.4e-26	30.3
WP_001057312.1\|22531_23008_-	hypothetical protein	NA	NA	NA	NA
WP_000093548.1\|23030_23381_-	hypothetical protein	NA	NA	NA	NA
WP_001396852.1\|23739_23859_+	ash family protein	NA	NA	NA	NA
WP_071550046.1\|23877_24099_+	host cell division inhibitor Icd-like protein	Q38557	Escherichia_phage	9.3e-26	80.3
WP_033560573.1\|24095_25187_+	phage antirepressor KilAC domain-containing protein	A0A077SLR9	Escherichia_phage	7.1e-159	79.8
WP_001187875.1\|25351_26152_+	phage antirepressor KilAC domain-containing protein	Q1MVK4	Enterobacteria_phage	1.9e-148	100.0
WP_033560572.1\|26181_27027_+	hypothetical protein	Q1MVK3	Enterobacteria_phage	4.2e-151	98.6
WP_001426344.1\|27077_27323_+	hypothetical protein	A0A1B0VDM5	Salmonella_phage	3.5e-13	45.0
WP_000268409.1\|27505_28102_-	hypothetical protein	A0A077SLI4	Escherichia_phage	5.3e-108	99.5
WP_000509939.1\|28273_28783_-	hypothetical protein	Q1MVJ9	Enterobacteria_phage	1.3e-91	100.0
WP_000035251.1\|28794_29376_-	hypothetical protein	Q71TM4	Escherichia_phage	3.8e-103	99.5
WP_033559105.1\|29411_30227_-	hypothetical protein	A0A1B0V835	Salmonella_phage	4.9e-112	98.9
WP_099004490.1\|30236_31826_-	hypothetical protein	Q71TB2	Escherichia_phage	3.2e-301	98.7
WP_023153705.1\|31886_33593_-	hypothetical protein	Q1MVJ5	Enterobacteria_phage	4.7e-311	94.4
WP_000038866.1\|33819_34821_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.7e-178	100.0
WP_001285362.1\|34837_36034_-	AAA family ATPase	A0A077SL49	Escherichia_phage	1.6e-225	100.0
35984:36000	attL	NA	NA	NA	NA
WP_001076427.1\|36591_37452_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	4.7e-158	100.0
WP_033559551.1\|37778_38180_-	hypothetical protein	Q71TL7	Escherichia_phage	1.2e-31	53.2
WP_001281923.1\|38250_38610_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	4.6e-38	69.1
WP_000336811.1\|38621_38762_-	hypothetical protein	Q71TL6	Escherichia_phage	3.1e-19	97.8
WP_000007769.1\|38787_39210_-	hypothetical protein	A0A1B0VCB0	Salmonella_phage	2.7e-58	100.0
WP_033550813.1\|39249_40038_-	hypothetical protein	A0A1B0V830	Salmonella_phage	7.5e-118	97.3
WP_001177862.1\|40499_40784_+	hypothetical protein	Q71TA2	Escherichia_phage	2.5e-47	97.9
WP_000472529.1\|40776_41682_+	recombination-associated protein RdgC	A0A077SK17	Escherichia_phage	1.6e-159	99.7
WP_033559547.1\|41678_44267_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1B0V7P0	Salmonella_phage	0.0e+00	87.9
WP_000751808.1\|46241_47069_+	hypothetical protein	A0A077SLJ6	Escherichia_phage	1.6e-131	100.0
WP_001276603.1\|47458_48823_+	replicative DNA helicase	O80281	Escherichia_phage	1.6e-253	99.8
WP_001198660.1\|48822_49821_+	hypothetical protein	Q71TK3	Escherichia_phage	5.8e-192	97.3
WP_000535205.1\|49867_50500_-	hypothetical protein	A0A1B0V872	Salmonella_phage	6.9e-90	100.0
WP_023153696.1\|50492_51509_-	hypothetical protein	A0A077SLQ1	Escherichia_phage	4.5e-192	99.7
WP_000602713.1\|51510_52296_-	hypothetical protein	A0A1B0V7N6	Salmonella_phage	7.2e-145	100.0
WP_000896806.1\|52282_53011_-	hypothetical protein	Q71TJ9	Escherichia_phage	4.2e-139	100.0
WP_001141908.1\|53014_54232_-	hypothetical protein	A0A077SL53	Escherichia_phage	1.1e-224	100.0
WP_000235786.1\|54241_54619_-	hypothetical protein	Q38620	Escherichia_phage	2.2e-67	100.0
WP_000840931.1\|54765_55011_+	hypothetical protein	Q71T86	Escherichia_phage	5.7e-40	100.0
WP_000943609.1\|55013_55592_+	VRR-NUC domain-containing protein	Q71T85	Escherichia_phage	1.5e-107	100.0
WP_000095381.1\|55658_55814_+	hypothetical protein	Q71TJ4	Escherichia_phage	2.7e-19	96.1
WP_012817939.1\|55755_56418_+	hypothetical protein	Q71T83	Escherichia_phage	4.5e-124	100.0
WP_000484112.1\|56315_56942_+	norphogenetic protein	A0A077SK52	Escherichia_phage	2.3e-122	99.0
WP_001354545.1\|56938_57616_+	metallophosphoesterase	A0A077SLQ6	Escherichia_phage	7.6e-135	100.0
WP_000684845.1\|57612_58314_+	hypothetical protein	Q1MVG6	Enterobacteria_phage	4.2e-144	100.0
WP_000107675.1\|58615_59878_+	hypothetical protein	A0A1B0V7L1	Salmonella_phage	7.8e-234	99.3
WP_000021755.1\|59950_60457_+	hypothetical protein	A0A077SK53	Escherichia_phage	5.4e-93	98.8
WP_033559671.1\|60651_61380_+	hypothetical protein	Q71T76	Escherichia_phage	9.3e-139	98.3
WP_000158003.1\|61463_61667_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	6.8e-31	94.0
WP_000476202.1\|61659_61899_+	hypothetical protein	S5MQM0	Escherichia_phage	2.0e-34	92.4
WP_033559672.1\|61895_62444_+	ead/Ea22-like family protein	A0A077SLK5	Escherichia_phage	1.3e-65	65.9
WP_000797289.1\|62616_62793_+	hypothetical protein	A0A077SK22	Escherichia_phage	5.3e-24	100.0
WP_000797279.1\|62789_62978_+	hypothetical protein	A0A1I9LJM4	Stx_converting_phage	1.4e-30	98.4
WP_023356290.1\|63491_64376_+	DUF551 domain-containing protein	Q1MVF7	Enterobacteria_phage	6.9e-120	97.7
WP_000516537.1\|64458_64692_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	1.6e-36	97.4
WP_001677496.1\|64870_65164_+	hypothetical protein	A0A077SK23	Escherichia_phage	9.1e-45	91.8
WP_023154376.1\|65170_65545_+	hypothetical protein	A0A1B0VBU7	Salmonella_phage	1.1e-66	97.6
WP_077780118.1\|65526_66459_+	hypothetical protein	A0A1B0VDS6	Salmonella_phage	2.6e-178	97.7
WP_001261544.1\|66455_66818_+	hypothetical protein	Q71TI4	Escherichia_phage	2.2e-56	100.0
WP_000123562.1\|66892_67030_-	hypothetical protein	NA	NA	NA	NA
WP_001377386.1\|67479_67731_+	DNA polymerase III subunit theta	Q71T70	Escherichia_phage	4.6e-37	94.0
WP_000506726.1\|67854_68244_+	DNA repair protein	Q1MVE7	Enterobacteria_phage	1.4e-69	99.2
WP_001190712.1\|68316_68538_+	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
WP_001216045.1\|68537_68918_+	type II toxin-antitoxin system death-on-curing family toxin	Q71T66	Escherichia_phage	1.9e-63	100.0
WP_000113019.1\|68922_69102_+	hypothetical protein	Q71TH5	Escherichia_phage	2.7e-23	98.3
WP_000648825.1\|69129_70173_+	DUF968 domain-containing protein	A0A1B0VBU2	Salmonella_phage	3.9e-207	99.4
WP_001369802.1\|70261_70714_+	hypothetical protein	Q71T63	Escherichia_phage	1.1e-78	98.7
WP_000219604.1\|70800_71994_+\|terminase	terminase	Q5QBP3	Enterobacteria_phage	5.7e-210	100.0
WP_000124155.1\|71993_73478_+	hypothetical protein	Q5QBP2	Enterobacteria_phage	2.5e-292	100.0
WP_000611656.1\|73502_74354_-	hypothetical protein	A0A077SLM8	Escherichia_phage	6.1e-158	99.6
WP_000874154.1\|74464_74674_-	hypothetical protein	Q5XLQ8	Enterobacteria_phage	4.8e-32	100.0
WP_000542336.1\|75278_75500_+	hypothetical protein	Q5QBN7	Enterobacteria_phage	4.5e-36	100.0
WP_029396411.1\|75507_76539_+\|integrase	tyrosine-type recombinase/integrase	A0A077SLE7	Escherichia_phage	1.3e-194	100.0
WP_001224234.1\|76589_76901_+	hypothetical protein	A0A077SK03	Escherichia_phage	1.0e-46	100.0
WP_023356281.1\|77146_77707_+	Ref family protein	Q5QBN4	Enterobacteria_phage	1.5e-99	98.9
WP_001376241.1\|77896_78538_+	hypothetical protein	A0A077SK30	Escherichia_phage	1.8e-114	99.1
WP_000006034.1\|78594_79899_+	SIR2 family protein	Q38324	Lactococcus_phage	3.4e-06	30.4
WP_000747846.1\|79940_80189_-	hypothetical protein	Q71TG0	Escherichia_phage	1.8e-41	100.0
WP_000224043.1\|80185_80626_-	hypothetical protein	A0A077SLF0	Escherichia_phage	1.7e-79	100.0
WP_033560569.1\|80659_87427_-	N-6 DNA methylase	A0A077SK04	Escherichia_phage	0.0e+00	98.4
WP_029490287.1\|87502_89212_+	hypothetical protein	A0A077SL38	Escherichia_phage	0.0e+00	99.8
WP_000132937.1\|89204_90224_+\|head	head processing protein	Q71TR6	Escherichia_phage	4.4e-179	96.8
WP_033558614.1\|90515_91073_-	lysozyme	Q71TF3	Escherichia_phage	3.0e-105	98.9
WP_023351703.1\|91242_91731_+	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	2.4e-74	87.0
91390:91406	attR	NA	NA	NA	NA
WP_023351704.1\|91933_92722_+	hypothetical protein	A0A077SK34	Escherichia_phage	2.1e-144	99.6
WP_000610388.1\|92714_93809_+	hypothetical protein	Q5QBP2	Enterobacteria_phage	6.7e-40	36.7
WP_001165936.1\|93840_94149_-	hypothetical protein	O21974	Escherichia_phage	5.4e-48	97.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023959

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

85163 : 126204

Escherichia_phage(33.33%)

transposase,integrase

attL 79218:79232|attR 123992:124006

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
79218:79232	attL	NA	NA	NA	NA
WP_061856962.1\|85163_86381_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	2.0e-226	100.0
WP_087758690.1\|86402_87522_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
WP_039052454.1\|88505_89282_+	hypothetical protein	NA	NA	NA	NA
WP_039052447.1\|89283_91548_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_039052448.1\|91890_92871_+\|transposase	IS5 family transposase	A0A077SK28	Escherichia_phage	2.9e-180	97.2
WP_039052449.1\|94379_94772_-	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_039052450.1\|94776_95748_-	plasmid segregation protein parM	A0A222YXF2	Escherichia_phage	9.7e-67	42.6
WP_000633913.1\|95976_96621_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	1.9e-39	43.0
WP_000239529.1\|96614_96890_+	hypothetical protein	NA	NA	NA	NA
WP_157916581.1\|97509_97749_-	resolvase	NA	NA	NA	NA
WP_039052451.1\|97855_98464_-	hypothetical protein	NA	NA	NA	NA
WP_039052452.1\|98533_98884_-	hypothetical protein	NA	NA	NA	NA
WP_000246635.1\|99561_100557_+	hypothetical protein	NA	NA	NA	NA
WP_000991831.1\|100560_101493_+	hypothetical protein	NA	NA	NA	NA
WP_001586223.1\|101785_101971_+	hypothetical protein	NA	NA	NA	NA
WP_024187432.1\|101971_102874_+	hypothetical protein	NA	NA	NA	NA
WP_001586225.1\|102875_103745_+	hypothetical protein	NA	NA	NA	NA
WP_001586226.1\|103801_105367_-	ATP-binding protein	NA	NA	NA	NA
WP_001586228.1\|105653_106166_+	hypothetical protein	NA	NA	NA	NA
WP_000545985.1\|106199_107333_-	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_001403958.1\|108300_108786_-	hypothetical protein	NA	NA	NA	NA
WP_001586230.1\|109176_111798_+	hypothetical protein	A0A1B1IUG5	uncultured_Mediterranean_phage	5.9e-18	23.7
WP_001261274.1\|111996_112227_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_000348883.1\|112813_113344_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001275013.1\|113347_113617_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_123002471.1\|114504_115494_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	2.5e-102	63.7
WP_001586233.1\|115816_116557_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	56.9
WP_042004909.1\|116677_116860_-	hypothetical protein	NA	NA	NA	NA
WP_001440647.1\|116926_117088_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_029702141.1\|117767_118508_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
WP_029702172.1\|119460_119910_-	hypothetical protein	NA	NA	NA	NA
WP_000027057.1\|123537_124398_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
123992:124006	attR	NA	NA	NA	NA
WP_001235713.1\|124580_125138_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_001389365.1\|125439_126204_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP023960

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023960_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023960_1

2858812-2858961

Orphan

Consensus_repeat	Method
TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023960_1

>merge|NZ_CP023960|1|2858812-2858961|CRISPRCasFinder
TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAATGCTGTTATTGTCGGATGCGGCATGAACGCCTTATCCGACCTACACAGCACCGAACTCGTAGGCCTGATAAGACGCG

>NZ_CP023960|1|1|2858812-2858961|CRISPRCasFinder
TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	CAAGCGTCGCATCAGGCAATGCTGTTATTGTCGGATGCGGCA
TGAACGCCTTATCCGACCTACACAGCACCGAACTCGTAGGCCTGATAAGACGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023960.1\|WP_000500687.1\|2869037_2869751_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NZ_CP023960.1\|WP_000584114.1\|2855896_2856997_-\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP023960.1\|WP_001318460.1\|2847004_2848024_+\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP023960.1\|WP_001197411.1\|2848807_2849839_+\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NZ_CP023960.1\|WP_000036448.1\|2866058_2867654_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023960.1\|WP_000896738.1\|2848027_2848591_-\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NZ_CP023960.1\|WP_000786399.1\|2859128_2859572_+\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP023960.1\|WP_000012907.1\|2864998_2866003_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP023960.1\|WP_001309159.1\|2852075_2853074_+\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NZ_CP023960.1\|WP_000998695.1\|2849862_2850627_+\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225
NZ_CP023960.1\|WP_000416387.1\|2859571_2862427_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP023960.1\|WP_001059412.1\|2863871_2864375_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023960.1\|WP_001295681.1\|2854814_2855897_-\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP023960.1\|WP_001128347.1\|2850689_2852009_+\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873
NZ_CP023960.1\|WP_021523335.1\|2853151_2854654_+\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP023960.1\|WP_016245205.1\|2862482_2863679_-\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP023960.1\|WP_001326836.1\|2867776_2868229_-\|toxin-antitoxin-biofilm-protein-TabA	unknown	unknown	gnl\|CDD\|225345
NZ_CP023960.1\|WP_000397144.1\|2857263_2858775_+\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP023960.1\|WP_000256681.1\|2868373_2868967_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP023960.1\|WP_000002953.1\|2864420_2864837_-\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876

Protein	Function_ID	Function_description	E-value
NZ_CP023960.1\|WP_000500687.1\|2869037_2869751_+\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	5.2218e-149
NZ_CP023960.1\|WP_000584114.1\|2855896_2856997_-\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP023960.1\|WP_001318460.1\|2847004_2848024_+\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.21683e-169
NZ_CP023960.1\|WP_001197411.1\|2848807_2849839_+\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NZ_CP023960.1\|WP_000896738.1\|2848027_2848591_-\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	1.3617e-126
NZ_CP023960.1\|WP_000786399.1\|2859128_2859572_+\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP023960.1\|WP_000012907.1\|2864998_2866003_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP023960.1\|WP_001309159.1\|2852075_2853074_+\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	1.4437e-109
NZ_CP023960.1\|WP_000998695.1\|2849862_2850627_+\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0
NZ_CP023960.1\|WP_000416387.1\|2859571_2862427_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP023960.1\|WP_001059412.1\|2863871_2864375_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.73712e-19
NZ_CP023960.1\|WP_001295681.1\|2854814_2855897_-\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP023960.1\|WP_001128347.1\|2850689_2852009_+\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP023960.1\|WP_021523335.1\|2853151_2854654_+\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP023960.1\|WP_016245205.1\|2862482_2863679_-\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	3.05031e-150
NZ_CP023960.1\|WP_001326836.1\|2867776_2868229_-\|toxin-antitoxin-biofilm-protein-TabA	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.64234e-69
NZ_CP023960.1\|WP_000397144.1\|2857263_2858775_+\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP023960.1\|WP_000256681.1\|2868373_2868967_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.07846e-09
NZ_CP023960.1\|WP_000002953.1\|2864420_2864837_-\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69

>NZ_CP023960.1|WP_000397144.1|2857263_2858775_+|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP023960.1|WP_000584114.1|2855896_2856997_-|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP023960.1|WP_001295681.1|2854814_2855897_-|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP023960.1|WP_021523335.1|2853151_2854654_+|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAQAGTVSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDETHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NZ_CP023960.1|WP_001309159.1|2852075_2853074_+|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NZ_CP023960.1|WP_001128347.1|2850689_2852009_+|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIVFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGHYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NZ_CP023960.1|WP_000998695.1|2849862_2850627_+|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NZ_CP023960.1|WP_001197411.1|2848807_2849839_+|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLRGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NZ_CP023960.1|WP_000896738.1|2848027_2848591_-|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NZ_CP023960.1|WP_001318460.1|2847004_2848024_+|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADY
>NZ_CP023960.1|WP_000786399.1|2859128_2859572_+|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP023960.1|WP_000416387.1|2859571_2862427_+|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADNKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP023960.1|WP_016245205.1|2862482_2863679_-|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSLKRFWWVTFFLPILMAIGMGAVFFISTKMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLARISRGIMPSLPFL
>NZ_CP023960.1|WP_001059412.1|2863871_2864375_+|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTQQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEFDGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
>NZ_CP023960.1|WP_000002953.1|2864420_2864837_-|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>NZ_CP023960.1|WP_000012907.1|2864998_2866003_+|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NZ_CP023960.1|WP_000036448.1|2866058_2867654_-|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARNAEGQDNTRNILDPKTFLEFLVKIFTLGYVDFSNRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADLSKVEIEITLSTITTMGTRQGHTAIIFQQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQREANKEVALLLNNHQLNWKDAIDYNELLEKPLASTLEKIKKEHLLLMPHVCDDTIPYLLGEGGILEEINGLKTLHDTKIDSGTEGNDEINNIKINLSNILIDSLDDAKINLEKVIDSMLETFFKLPYINDVKILEWCFNQSMQYSDDTTKIKHARSVIDHIDFNCDQSKIAETLFFNLNKEPYKNSPELQELIWEKLVVYVNDFNLSNQEKSRLILRLFDDVKLVFDKVPLSILVNDIFLKDFFMKQPDFAKWYFYQLLKSYEGEQMYLNELGYVYGDEEKTKEIVNKLPGYVVKIFEEKIDNELKIRTRMMEILRDEQINIYEYINEKQLEKLNPQGNLRIAIEKFGWNNKPITA
>NZ_CP023960.1|WP_001326836.1|2867776_2868229_-|toxin-antitoxin-biofilm-protein-TabA
MIIGNIHNLQPWLPQELRQAIEHIKAHVTPETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLRGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP023960.1|WP_000256681.1|2868373_2868967_-|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKVGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE
>NZ_CP023960.1|WP_000500687.1|2869037_2869751_+|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAEHLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

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Crispr_ID: NZ_CP023960_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023960_2

4690360-4690693

Orphan

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

5 spacers

The CRISPR arrays of NZ_CP023960_2

>merge|NZ_CP023960|2|4690360-4690693|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGACATTGACTGCCCGTGGCGTCCCCGCGACCTTGAGTTCCCCGCGCCAGCGGGGATAAACCGAGTTTGTCGAACACGGAGCGGAGCATACCCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGTGCACGCCCTGCCGGAATCTCCCCTCGCTCTCGAGTTCCCCGCGCCAGCGGGGATAAACCGAGTAAGCCGGTTGATTATCGCCAGGGATATTAGAGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTAGCTCCGCAATGTTGGATATCACTGATGAGTTCCCCGCACCAGCGGGAATAAACCA

>NZ_CP023960|2|1|4690360-4690632|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACATTGACTGCCCGTGGCGTCCCCGCGACCTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTTGTCGAACACGGAGCGGAGCATACCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TGCACGCCCTGCCGGAATCTCCCCTCGCTCTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTAAGCCGGTTGATTATCGCCAGGGATATTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP023960|2|2|4690360-4690693|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACATTGACTGCCCGTGGCGTCCCCGCGACCTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTTGTCGAACACGGAGCGGAGCATACCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TGCACGCCCTGCCGGAATCTCCCCTCGCTCTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTAAGCCGGTTGATTATCGCCAGGGATATTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTAGCTCCGCAATGTTGGATATCACTGAT
GAGTTCCCCGCACCAGCGGGAATAAACCA

>NZ_CP023960|2|1|4690360-4690693|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACATTGACTGCCCGTGGCGTCCCCGCGACCTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTTGTCGAACACGGAGCGGAGCATACCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TGCACGCCCTGCCGGAATCTCCCCTCGCTCTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGTAAGCCGGTTGATTATCGCCAGGGATATTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTAGCTCCGCAATGTTGGATATCACTGAT
GAGTTCCCCGCACCAGCGGGAATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023960.1\|WP_000254738.1\|4683675_4684011_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP023960.1\|WP_000581937.1\|4683427_4683676_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP023960.1\|WP_001521172.1\|4679766_4681068_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP023960.1\|WP_001521167.1\|4698149_4698929_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP023960.1\|WP_001130266.1\|4701368_4701944_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP023960.1\|WP_000210878.1\|4685101_4686739_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP023960.1\|WP_000059301.1\|4695286_4696741_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP023960.1\|WP_000147654.1\|4696762_4698172_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP023960.1\|WP_033559144.1\|4688183_4689056_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP023960.1\|WP_001071643.1\|4684082_4684874_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP023960.1\|WP_100190663.1\|4699885_4701234_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP023960.1\|WP_021523232.1\|4694431_4695217_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP023960.1\|WP_020233775.1\|4692835_4694113_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP023960.1\|WP_000186450.1\|4676953_4679710_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP023960.1\|WP_099004487.1\|4691330_4692809_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP023960.1\|WP_000226798.1\|4681115_4683350_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP023960.1\|WP_000109536.1\|4701960_4702221_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP023960.1\|WP_001199973.1\|4689349_4690021_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP023960.1\|WP_001521165.1\|4698925_4699786_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP023960.1\|WP_000036723.1\|4686825_4688124_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617

Protein	Function_ID	Function_description	E-value
NZ_CP023960.1\|WP_000254738.1\|4683675_4684011_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP023960.1\|WP_000581937.1\|4683427_4683676_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP023960.1\|WP_001521172.1\|4679766_4681068_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP023960.1\|WP_001521167.1\|4698149_4698929_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	8.81851e-61
NZ_CP023960.1\|WP_001130266.1\|4701368_4701944_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP023960.1\|WP_000210878.1\|4685101_4686739_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP023960.1\|WP_000059301.1\|4695286_4696741_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.6361e-82
NZ_CP023960.1\|WP_000147654.1\|4696762_4698172_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.45668e-51
NZ_CP023960.1\|WP_033559144.1\|4688183_4689056_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.25439e-93
NZ_CP023960.1\|WP_001071643.1\|4684082_4684874_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.36315e-160
NZ_CP023960.1\|WP_100190663.1\|4699885_4701234_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.29095e-52
NZ_CP023960.1\|WP_021523232.1\|4694431_4695217_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.07958e-139
NZ_CP023960.1\|WP_020233775.1\|4692835_4694113_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.01506e-28
NZ_CP023960.1\|WP_000186450.1\|4676953_4679710_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP023960.1\|WP_099004487.1\|4691330_4692809_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.38e-106
NZ_CP023960.1\|WP_000226798.1\|4681115_4683350_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP023960.1\|WP_000109536.1\|4701960_4702221_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	4.39108e-42
NZ_CP023960.1\|WP_001199973.1\|4689349_4690021_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP023960.1\|WP_001521165.1\|4698925_4699786_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	8.34461e-89
NZ_CP023960.1\|WP_000036723.1\|4686825_4688124_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0

>NZ_CP023960.1|WP_001199973.1|4689349_4690021_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP023960.1|WP_033559144.1|4688183_4689056_-|YgcG-family-protein
MRYFILIFTFVCSFIAAQPTIVPSLQQQVTDLTSSLNSQEKKELTYKLESIFNNTQVQIAVLIVPTTKDETIEKYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPANPSEIESASSSAHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSSVCISAIYLLDLFLFSDKTFSIAVFFFFFTFTTIMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSDGGGSSGGGGASGRW
>NZ_CP023960.1|WP_000036723.1|4686825_4688124_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP023960.1|WP_000210878.1|4685101_4686739_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP023960.1|WP_001071643.1|4684082_4684874_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP023960.1|WP_000254738.1|4683675_4684011_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP023960.1|WP_000581937.1|4683427_4683676_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP023960.1|WP_000226798.1|4681115_4683350_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRECVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP023960.1|WP_001521172.1|4679766_4681068_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDNPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLDSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVAGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLHNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP023960.1|WP_000186450.1|4676953_4679710_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG
>NZ_CP023960.1|WP_099004487.1|4691330_4692809_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKLLPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPYYATAVDKMVRVKDIFMPVESNAKRYNAMNKGIFKELTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP023960.1|WP_020233775.1|4692835_4694113_-|MFS-transporter
MQHNSYRRWIALAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP023960.1|WP_021523232.1|4694431_4695217_+|SDR-family-oxidoreductase
MSIESLNALSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILINNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP023960.1|WP_000059301.1|4695286_4696741_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWTLLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP023960.1|WP_000147654.1|4696762_4698172_+|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGIKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISESPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP023960.1|WP_001521167.1|4698149_4698929_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADEQAAAALLLAQRKNGTSMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQYQNPLELIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTENGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAVGKAAIIRKTVAAESPAMQCLQLARAEQQRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP023960.1|WP_001521165.1|4698925_4699786_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAATASWQAAQDFSGCTLAHWKIEPQPAVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGADKNATLPSGMQQLNIVPGALPDWLVSIENLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHAECQ
>NZ_CP023960.1|WP_100190663.1|4699885_4701234_-|IS3-family-transposase
MKHSFEVKLAAVNHYLAGHAGIISTAKLFQLSHTSLSHWINLFLLHGPRALDCRHKRSYSPEDKLCVVLYALGHSESLPRVAARFNIPSHNTVKNWIKGYRKSGNEAFIRRRKEKSMTRSDDTHENEANMTPEEMKNELRYLRAENAYLKAMQEHLLEKKPPGAGEKTKVIRSLRCGHCQSDLLKAAGLARSTLYYQLSLQKAKDKYADVKQLIASIFHEHRGCYGYRRIHCELQKRGLKFSGKTVRKLMQQLGLKSPVRLKKYRSYRGNMGLAAENILQRQFKAEAPCEKWVTDITEFRAGGQKLYLSPILDLFNGEIVAWETACRPTEELVKRMLNKGLESLAEGEKPLLHSDQGWHYRIKSYQSALADRGLVQSMSRKGNCLDNAVMENFFGHLKEEMYYRRDYRNVEELENAVNEYITYWNQKRIKLSLGGLSPVEYRTEHQKAG
>NZ_CP023960.1|WP_001130266.1|4701368_4701944_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP023960.1|WP_000109536.1|4701960_4702221_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTVQRLINACPAGLFSLTPEGDLRVDYRGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG

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Crispr_ID: NZ_CP023960_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023960_3

4717831-4718405

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAA	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAA	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAA	CRT

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP023960_3

>merge|NZ_CP023960|3|4717831-4718405|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAATCGCCGAATAGACAATGACCGCAAAGTGTCTATCGGTGTTCCCCGCGCCAGCGGGGATAAATCGCTTTCCTACTGAATCCGCGTCGGTTGCCTCTGGTGTTCCCCGCGCCAGCGGGGATAAATCGAGCCAGACACATTGCTTTATCGCGCCACGCTGGTGTTCCCCGCGCCAGCGGGGATAAATCGGCGAGTAAGAGTACTGAGTATTTTAATCTCATGTGTTCCCCGCGCCAGCGGGGATAAATCGGCCATAGACTTTATTAACTTCATTGGGGGTTAGTGTTCCCCGCGCCAGCGGGGATAAATCGCGTATCACAACCGGCCTCAGTACGTATCAGAAGTGTTCCCCGCGCCAGCGGGGATAAATCGAGGGGCAGGGAGTGACGCTGGAGCAGGCGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGGAAACCGTTCGTACTTATCGACCTCAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAGGGGACGGCTACGGGACGCCGCCTATTGACGTGTTCCCCGCGTCAGCGGGGATAAA

>NZ_CP023960|3|2|4717831-4718344|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCCGAATAGACAATGACCGCAAAGTGTCTATCG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCTTTCCTACTGAATCCGCGTCGGTTGCCTCTG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGAGCCAGACACATTGCTTTATCGCGCCACGCTG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGCGAGTAAGAGTACTGAGTATTTTAATCTCAT
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGCCATAGACTTTATTAACTTCATTGGGGGTTA
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCGTATCACAACCGGCCTCAGTACGTATCAGAA
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGAGGGGCAGGGAGTGACGCTGGAGCAGGCGATC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCAGGGAAACCGTTCGTACTTATCGACCTCAAC
GTGTTCCCCGCGCCAGCGGGGATAAA

>NZ_CP023960|3|3|4717831-4718405|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCCGAATAGACAATGACCGCAAAGTGTCTATCG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCTTTCCTACTGAATCCGCGTCGGTTGCCTCTG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGAGCCAGACACATTGCTTTATCGCGCCACGCTG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGCGAGTAAGAGTACTGAGTATTTTAATCTCAT
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGCCATAGACTTTATTAACTTCATTGGGGGTTA
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCGTATCACAACCGGCCTCAGTACGTATCAGAA
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGAGGGGCAGGGAGTGACGCTGGAGCAGGCGATC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCAGGGAAACCGTTCGTACTTATCGACCTCAAC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGAAGGGGACGGCTACGGGACGCCGCCTATTGAC
GTGTTCCCCGCGTCAGCGGGGATAAA

>NZ_CP023960|3|2|4717831-4718405|CRT
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCCGAATAGACAATGACCGCAAAGTGTCTATCG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCTTTCCTACTGAATCCGCGTCGGTTGCCTCTG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGAGCCAGACACATTGCTTTATCGCGCCACGCTG
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGCGAGTAAGAGTACTGAGTATTTTAATCTCAT
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGGCCATAGACTTTATTAACTTCATTGGGGGTTA
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGCGTATCACAACCGGCCTCAGTACGTATCAGAA
GTGTTCCCCGCGCCAGCGGGGATAAA	TCGAGGGGCAGGGAGTGACGCTGGAGCAGGCGATC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGCAGGGAAACCGTTCGTACTTATCGACCTCAAC
GTGTTCCCCGCGCCAGCGGGGATAAA	CCGAAGGGGACGGCTACGGGACGCCGCCTATTGAC
GTGTTCCCCGCGTCAGCGGGGATAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023960.1\|WP_000029331.1\|4713528_4714065_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP023960.1\|WP_000517476.1\|4723287_4723599_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP023960.1\|WP_001521153.1\|4718489_4719527_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP023960.1\|WP_001090361.1\|4720688_4722116_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP023960.1\|WP_001521160.1\|4707826_4708561_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP023960.1\|WP_000568924.1\|4724803_4725853_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP023960.1\|WP_001521157.1\|4714079_4715135_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP023960.1\|WP_001173673.1\|4722115_4722721_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP023960.1\|WP_001521158.1\|4709172_4711872_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP023960.1\|WP_020234039.1\|4715145_4715892_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP023960.1\|WP_000956458.1\|4708825_4708978_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP023960.1\|WP_001295182.1\|4725833_4726595_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP023960.1\|WP_001521155.1\|4715873_4716524_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP023960.1\|WP_001084115.1\|4711969_4713532_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP023960.1\|WP_000372392.1\|4719778_4720687_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP023960.1\|WP_001521152.1\|4724327_4724807_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP023960.1\|WP_001521154.1\|4717440_4717734_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP023960.1\|WP_001246104.1\|4722770_4723094_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP023960.1\|WP_000144858.1\|4716520_4717444_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP023960.1\|WP_000246138.1\|4723617_4724328_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670

Protein	Function_ID	Function_description	E-value
NZ_CP023960.1\|WP_000029331.1\|4713528_4714065_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.72866e-28
NZ_CP023960.1\|WP_000517476.1\|4723287_4723599_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP023960.1\|WP_001521153.1\|4718489_4719527_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP023960.1\|WP_001090361.1\|4720688_4722116_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP023960.1\|WP_001521160.1\|4707826_4708561_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.91666e-137
NZ_CP023960.1\|WP_000568924.1\|4724803_4725853_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP023960.1\|WP_001521157.1\|4714079_4715135_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	7.45078e-156
NZ_CP023960.1\|WP_001173673.1\|4722115_4722721_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP023960.1\|WP_001521158.1\|4709172_4711872_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP023960.1\|WP_020234039.1\|4715145_4715892_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.25317e-47
NZ_CP023960.1\|WP_000956458.1\|4708825_4708978_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP023960.1\|WP_001295182.1\|4725833_4726595_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP023960.1\|WP_001521155.1\|4715873_4716524_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	3.05036e-90
NZ_CP023960.1\|WP_001084115.1\|4711969_4713532_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP023960.1\|WP_000372392.1\|4719778_4720687_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP023960.1\|WP_001521152.1\|4724327_4724807_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	2.39634e-105
NZ_CP023960.1\|WP_001521154.1\|4717440_4717734_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	9.65861e-64
NZ_CP023960.1\|WP_001246104.1\|4722770_4723094_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP023960.1\|WP_000144858.1\|4716520_4717444_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.11358e-157
NZ_CP023960.1\|WP_000246138.1\|4723617_4724328_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121

>NZ_CP023960.1|WP_001521154.1|4717440_4717734_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRIAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGVRLVSFLPVDNQ
>NZ_CP023960.1|WP_000144858.1|4716520_4717444_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP023960.1|WP_001521155.1|4715873_4716524_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLLPAQLLHLVGRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDIFTIECRPFAPELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVRGQVEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP023960.1|WP_020234039.1|4715145_4715892_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRDYYTDAWWMVAVATTPDASYRLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDSFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP023960.1|WP_001521157.1|4714079_4715135_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECVSFDVMNKQGSMKDVLDFICA
>NZ_CP023960.1|WP_000029331.1|4713528_4714065_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSEGRFTRLSAVKTPDDLLRQLRRAVKLLNGSVNLISLAEDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP023960.1|WP_001084115.1|4711969_4713532_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRYKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLESEKLREALLSLEHAFQFGPDSPSFMQDFEALTGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRHIEEGQDADELLSKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQNAKAAREKKQEAAE
>NZ_CP023960.1|WP_001521158.1|4709172_4711872_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKSNCFGLTDYFRQLGFADTEQAAQFFAWLLCWHDTGKFARSFQQLYLHPQLKVPEGARKNYEKISHSTLGYWLWHHYLSEYEELLPSSSLSPRKLKRVMEMWMPITTGHHGRPPDRIDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKGYWQKTLVQAQNALTVFPLKAKVAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQCDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDSSQRAGKVLICTQVLESSVDCDMDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIASVVKPYANGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRQWCIEQRKDPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP023960.1|WP_000956458.1|4708825_4708978_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP023960.1|WP_001521160.1|4707826_4708561_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRTNLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP023960.1|WP_001521153.1|4718489_4719527_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSAKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP023960.1|WP_000372392.1|4719778_4720687_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP023960.1|WP_001090361.1|4720688_4722116_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP023960.1|WP_001173673.1|4722115_4722721_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP023960.1|WP_001246104.1|4722770_4723094_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP023960.1|WP_000517476.1|4723287_4723599_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP023960.1|WP_000246138.1|4723617_4724328_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP023960.1|WP_001521152.1|4724327_4724807_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPLIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP023960.1|WP_000568924.1|4724803_4725853_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP023960.1|WP_001295182.1|4725833_4726595_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023960_3	3.4\|4718040\|35\|NZ_CP023960\|PILER-CR,CRISPRCasFinder,CRT	4718040-4718074	35	NZ_CP037443	Klebsiella sp. PO552 plasmid p2, complete sequence	42676-42710	2	0.943
NZ_CP023960_2	2.3\|4690511\|32\|NZ_CP023960\|PILER-CR,CRISPRCasFinder,CRT	4690511-4690542	32	NC_016040	Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence	37866-37897	6	0.812
NZ_CP023960_2	2.1\|4690389\|32\|NZ_CP023960\|PILER-CR,CRISPRCasFinder,CRT	4690389-4690420	32	NZ_CP045381	Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence	107507-107538	8	0.75
NZ_CP023960_2	2.1\|4690389\|32\|NZ_CP023960\|PILER-CR,CRISPRCasFinder,CRT	4690389-4690420	32	NZ_CP019631	Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence	199281-199312	8	0.75
NZ_CP023960_2	2.4\|4690572\|32\|NZ_CP023960\|PILER-CR,CRISPRCasFinder,CRT	4690572-4690603	32	MN855878	Bacteriophage sp. isolate 336, complete genome	5171-5202	8	0.75
NZ_CP023960_3	3.5\|4718101\|35\|NZ_CP023960\|PILER-CR,CRISPRCasFinder,CRT	4718101-4718135	35	NZ_CP038863	Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence	20152-20186	12	0.657

1. spacer 3.4|4718040|35|NZ_CP023960|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037443 (Klebsiella sp. PO552 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.943

tcggcgagtaagagtactgagtattttaatctcat	CRISPR spacer
acggcgagtaagagtgctgagtattttaatctcat	Protospacer
 **************.*******************

2. spacer 2.3|4690511|32|NZ_CP023960|PILER-CR,CRISPRCasFinder,CRT matches to NC_016040 (Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence) position: , mismatch: 6, identity: 0.812

tgcacgccctgccggaatctcccctcgctctc	CRISPR spacer
tgcacgccctgccggaagatcccctcacgatt	Protospacer
*****************  *******.*  *.

3. spacer 2.1|4690389|32|NZ_CP023960|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 8, identity: 0.75

acattgactgcccgtggcgtccccgcgacctt	CRISPR spacer
ccgtcgactgcccgtggggtcccagcgaaatc	Protospacer
 *.*.************ ***** ****  *.

4. spacer 2.1|4690389|32|NZ_CP023960|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019631 (Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acattgactgcccgtggcgtccccgcgacctt	CRISPR spacer
ccgtcgactgcccgtggggtcccagcgaaatc	Protospacer
 *.*.************ ***** ****  *.

5. spacer 2.4|4690572|32|NZ_CP023960|PILER-CR,CRISPRCasFinder,CRT matches to MN855878 (Bacteriophage sp. isolate 336, complete genome) position: , mismatch: 8, identity: 0.75

agtaagccggttgattatcgcca----gggatatta	CRISPR spacer
agtaagcaggatgattatcgccaccatggcgt----	Protospacer
******* ** ************    ** .*

6. spacer 3.5|4718101|35|NZ_CP023960|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038863 (Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.657

tcggccatagactttattaacttcattgggggtta	CRISPR spacer
atcgccatagaattttttaacttcattgcctaaag	Protospacer
 . ******** *** ************   .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

193815 : 203258

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569374.1\|193815_194742_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	4.8e-23	30.8
WP_000783145.1\|194746_195478_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|195458_195566_-	protein YohO	NA	NA	NA	NA
WP_001240398.1\|195625_196357_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.8e-111	99.0
WP_001309587.1\|196578_198264_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	7.3e-304	99.5
WP_000598641.1\|198260_198980_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|199026_199497_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001295429.1\|199538_200000_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_021523183.1\|200124_202125_-	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001520842.1\|202121_203258_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	2.5e-162	97.4

DBSCAN-SWA_2

214697 : 313482

Escherichia_phage(41.67%)

integrase,head,lysis,tRNA,capsid,tail,portal,terminase,holin,plate

attL 196271:196288|attR 321348:321365

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
196271:196288	attL	NA	NA	NA	NA
WP_001520834.1\|214697_216731_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	2.3e-54	27.3
WP_001005448.1\|216862_217972_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_001328276.1\|218234_218516_+	YehE family protein	NA	NA	NA	NA
WP_000830468.1\|218811_219354_+	fimbrial protein	NA	NA	NA	NA
WP_000677340.1\|219434_220109_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_001520833.1\|220124_222605_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000702203.1\|222620_223655_+	putative fimbrial-like adhesin protein	NA	NA	NA	NA
WP_000153067.1\|223736_224075_-	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_000134572.1\|224293_225118_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000019944.1\|225238_225511_+	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_001195594.1\|225733_226522_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_000822277.1\|226518_227319_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_020233504.1\|227383_228202_+	glycoside hydrolase family 25 protein	D0R7H8	Paenibacillus_phage	1.1e-23	38.0
WP_000434044.1\|228253_229000_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001520829.1\|228973_229939_-	kinase	NA	NA	NA	NA
WP_001520828.1\|229935_230940_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	4.4e-14	29.7
WP_000858471.1\|230936_232214_-	MFS transporter	NA	NA	NA	NA
WP_000129551.1\|232470_233523_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_001308759.1\|233752_234607_+	tagatose-bisphosphate aldolase subunit GatY	NA	NA	NA	NA
WP_085701420.1\|235902_236355_+	PTS galactitol transporter subunit IIA	NA	NA	NA	NA
WP_000823282.1\|236385_236670_+	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_000490663.1\|236673_238029_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_001520826.1\|238076_239117_+	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
WP_000178552.1\|239216_239996_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000807371.1\|240077_240977_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	4.8e-12	29.0
WP_001303579.1\|241391_241709_+	hypothetical protein	NA	NA	NA	NA
WP_099004451.1\|241985_242999_-\|integrase	site-specific integrase	Q83VS6	Escherichia_phage	2.7e-192	98.8
WP_000020919.1\|243114_243414_-	helix-turn-helix domain-containing protein	Q1JS61	Enterobacteria_phage	2.4e-48	100.0
WP_029701703.1\|243535_243811_+	hypothetical protein	Q1JS60	Enterobacteria_phage	2.2e-48	98.9
WP_162852172.1\|243821_243992_+	hypothetical protein	S4TNZ7	Salmonella_phage	3.9e-24	98.2
WP_029701701.1\|243988_244489_+	hypothetical protein	S4TTB7	Salmonella_phage	1.9e-90	98.8
WP_000557703.1\|244552_244777_+	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_001754915.1\|244776_245079_+	DUF5405 family protein	A0A0F7LCL4	Escherichia_phage	3.5e-47	100.0
WP_029701699.1\|245078_245303_+	TraR/DksA family transcriptional regulator	A0A0F7LDG9	Escherichia_phage	3.8e-35	98.6
WP_029701698.1\|245299_245575_+	DUF5405 family protein	U5N3W1	Enterobacteria_phage	1.5e-44	100.0
WP_029401229.1\|247910_249062_+	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	1.4e-32	31.2
WP_029401228.1\|249012_250005_-	hypothetical protein	NA	NA	NA	NA
WP_029401227.1\|250001_251426_-	ATP-binding protein	NA	NA	NA	NA
WP_001533791.1\|251812_252847_-\|portal	phage portal protein	A0A0F7LDI7	Escherichia_phage	2.7e-200	99.7
WP_000156861.1\|252846_254619_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001085952.1\|254792_255647_+\|capsid	GPO family capsid scaffolding protein	Q778Z1	Enterobacteria_phage	8.6e-136	99.3
WP_023148837.1\|255701_256775_+\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	7.4e-201	99.2
WP_033559479.1\|257620_258130_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	7.3e-90	98.8
WP_000846409.1\|258129_258333_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000123123.1\|258336_258618_+\|holin	phage holin family protein	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_023148834.1\|258617_259115_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	1.2e-92	99.4
WP_000736597.1\|259129_259555_+	hypothetical protein	A0A0F7LBP4	Escherichia_phage	4.7e-58	95.0
WP_032152948.1\|259542_259968_+\|lysis	LysB family phage lysis regulatory protein	Q858W0	Yersinia_virus	1.4e-65	96.5
WP_001440152.1\|259939_260113_+	hypothetical protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
WP_001774102.1\|260075_260543_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	9.7e-81	98.1
WP_023148832.1\|260535_260988_+	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	2.4e-76	99.3
WP_023148831.1\|261090_262164_-	hypothetical protein	NA	NA	NA	NA
WP_024176299.1\|262250_262880_+\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.8e-106	95.2
WP_000127163.1\|262876_263224_+	GPW/gp25 family protein	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
WP_001121474.1\|263228_264137_+\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	1.2e-162	100.0
WP_023148828.1\|264129_264660_+\|tail	phage tail protein I	A0A0F7LDF3	Escherichia_phage	3.9e-102	98.9
WP_023148827.1\|264670_266695_+\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	6.5e-299	71.9
WP_023148826.1\|266696_267224_+\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	8.3e-89	92.6
WP_023148825.1\|267514_268741_+	DUF4263 domain-containing protein	Q858S8	Enterobacteria_phage	1.1e-181	99.4
WP_032152801.1\|269027_270218_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.1e-224	99.5
WP_001251408.1\|270230_270749_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001031303.1\|270805_271081_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_000785970.1\|271113_271233_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_023148822.1\|271225_273673_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	96.0
WP_023140595.1\|273687_274167_+\|tail	phage tail protein	O64315	Escherichia_phage	2.5e-84	98.7
WP_023148821.1\|274166_275330_+	phage late control D family protein	U5N3V4	Enterobacteria_phage	4.1e-205	99.2
WP_000468308.1\|275412_275631_+	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001292809.1\|275950_278233_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.3e-162	41.4
WP_000642546.1\|278287_279145_-	formate transporter FocA	NA	NA	NA	NA
WP_001328457.1\|279550_281311_-	YcaO-like family protein	NA	NA	NA	NA
WP_000642852.1\|281440_282133_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_000057149.1\|282331_283420_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.5e-81	46.8
WP_001522761.1\|283490_284774_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_001313710.1\|284943_285708_+	metallopeptidase YcaL	NA	NA	NA	NA
WP_001522762.1\|285880_286564_+	(d)CMP kinase	NA	NA	NA	NA
WP_085695551.1\|286674_288348_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_000167336.1\|288507_288792_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
WP_021523053.1\|288998_291263_+	ComEC family protein	NA	NA	NA	NA
WP_000551270.1\|291299_293048_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	2.5e-57	29.8
WP_000570527.1\|293044_294031_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_001522765.1\|294067_295300_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000350058.1\|295351_295534_+	protein YcaR	NA	NA	NA	NA
WP_021523054.1\|295530_296277_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_000436922.1\|296430_297324_+	YcbJ family phosphotransferase	NA	NA	NA	NA
WP_001522767.1\|297300_298080_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_001298300.1\|298215_299001_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288850.1\|298997_300320_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_001295931.1\|300300_301005_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_021523055.1\|301004_305465_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_020232980.1\|305725_307573_+	L,D-transpeptidase	NA	NA	NA	NA
WP_001295932.1\|307753_308302_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	7.0e-06	33.7
WP_001109449.1\|308328_308976_+	hydroxyacylglutathione hydrolase GloC	NA	NA	NA	NA
WP_000462687.1\|309026_310217_-	aspartate transaminase	NA	NA	NA	NA
WP_000117881.1\|312081_313482_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	5.3e-82	36.1
321348:321365	attR	NA	NA	NA	NA

DBSCAN-SWA_3

498839 : 554821

Escherichia_phage(39.62%)

integrase,head,lysis,tRNA,capsid,tail,terminase,holin

attL 492295:492309|attR 519435:519449

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
492295:492309	attL	NA	NA	NA	NA
WP_000074983.1\|498839_499958_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	7.7e-84	44.2
WP_000003742.1\|499926_500196_-	excisionase	NA	NA	NA	NA
WP_099004452.1\|500257_502714_-	exonuclease	V5UQJ3	Shigella_phage	2.5e-103	42.6
WP_001093951.1\|502791_502995_-	DUF1482 family protein	NA	NA	NA	NA
WP_000450218.1\|502991_503180_-	cell division inhibitor	NA	NA	NA	NA
WP_000935596.1\|503190_504045_-	Rha family phage regulatory protein	A0A0P0ZE80	Stx2-converting_phage	3.6e-65	63.2
WP_000394557.1\|504575_504950_-	hypothetical protein	NA	NA	NA	NA
WP_000379564.1\|504961_505114_-	DUF1391 family protein	NA	NA	NA	NA
WP_000787428.1\|505320_505728_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	9.8e-29	49.6
WP_000912294.1\|505804_506032_+	transcriptional regulator	NA	NA	NA	NA
WP_000705383.1\|506015_506567_+	hypothetical protein	NA	NA	NA	NA
WP_000020541.1\|506538_507579_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-90	87.2
WP_001309414.1\|507490_508033_+	hypothetical protein	A0A0U2JGJ0	Escherichia_phage	3.6e-79	90.2
WP_000450706.1\|508066_508837_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.1e-86	68.4
WP_001141099.1\|508852_509245_+	DUF977 family protein	A0A088CBK9	Shigella_phage	1.5e-39	63.3
WP_001266130.1\|509241_509538_+	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	95.8
WP_001209475.1\|509534_509996_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	2.6e-38	94.0
WP_000403791.1\|509973_510330_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.1e-57	98.3
WP_000137948.1\|510425_510833_+	hypothetical protein	A0A0N7KZJ2	Stx2-converting_phage	1.0e-22	60.4
WP_001229301.1\|510834_511200_+	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	1.9e-68	99.2
WP_000208092.1\|511196_512183_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.8e-44	41.5
WP_000813254.1\|512741_512897_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001309416.1\|513113_513365_+	hypothetical protein	NA	NA	NA	NA
WP_001309417.1\|513431_513710_+	hypothetical protein	I6PCV7	Cronobacter_phage	6.3e-11	45.3
WP_001265256.1\|513711_514770_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.8e-90	48.3
WP_000140038.1\|514770_515139_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	2.4e-34	62.8
WP_001064909.1\|515131_515821_+	antiterminator	I6PDF8	Cronobacter_phage	7.1e-56	48.1
WP_001309418.1\|516033_516231_+	hypothetical protein	S5MQK8	Escherichia_phage	1.7e-26	93.8
WP_157835956.1\|516206_516320_+	DUF3927 family protein	NA	NA	NA	NA
WP_000871291.1\|516600_516936_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_001309419.1\|517181_517385_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	2.7e-27	96.8
WP_001309421.1\|517381_517543_+	hypothetical protein	Q08JA2	Stx2-converting_phage	1.6e-14	89.1
WP_000284506.1\|517692_517908_+\|holin	class II holin family protein	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001037014.1\|517912_518803_+	YdfR family protein	Q08JA0	Stx2-converting_phage	2.1e-108	70.9
WP_001092866.1\|518839_519373_+	lysozyme	Q6H9V6	Enterobacteria_phage	6.7e-102	97.2
WP_001446668.1\|519529_519712_+	hypothetical protein	NA	NA	NA	NA
519435:519449	attR	NA	NA	NA	NA
WP_001280932.1\|519726_519858_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.6e-07	79.1
WP_032142285.1\|519860_520328_+\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	6.7e-66	84.4
WP_000830178.1\|520638_520965_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_001322427.1\|521087_521441_-	hypothetical protein	NA	NA	NA	NA
WP_000235436.1\|521923_522433_+\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_170920044.1\|522404_523652_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.5e-165	68.4
WP_001253888.1\|523641_525147_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.0e-99	53.1
WP_000256814.1\|525183_525531_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.8e-23	59.1
WP_000522603.1\|525588_526617_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.4e-116	62.2
WP_000201530.1\|526668_527043_+	hypothetical protein	NA	NA	NA	NA
WP_001204533.1\|527035_527389_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.9e-41	70.1
WP_000975005.1\|527404_527980_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.6e-48	56.8
WP_000683079.1\|527976_528372_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235111.1\|528379_529132_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	2.7e-133	98.0
WP_000479111.1\|529145_529577_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.8e-41	68.1
WP_000533402.1\|529603_530017_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000082417.1\|529997_532559_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	87.5
WP_000847298.1\|532555_532885_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_001328631.1\|532884_533583_+\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	3.2e-128	97.0
WP_000194723.1\|533593_534337_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	5.0e-148	98.0
WP_032300536.1\|534282_534915_+\|tail	tail assembly protein	Q9EYE5	Enterobacteria_phage	4.2e-103	91.8
WP_000514726.1\|535258_538951_+	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	86.0
WP_001233148.1\|539018_539618_+	Ail/Lom family protein	H6WZM8	Escherichia_phage	7.7e-107	94.0
WP_000216486.1\|539769_542796_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0K2FIZ6	Escherichia_phage	1.4e-55	54.6
WP_000885577.1\|542795_543380_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	94.8
WP_000240999.1\|543434_544103_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937481.1\|544159_544426_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-17	81.8
WP_000799406.1\|544657_545521_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531594.1\|545504_546641_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_001522887.1\|546890_548117_+	peptidase T	NA	NA	NA	NA
WP_000456506.1\|548165_549287_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000735412.1\|549362_550823_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|550822_551494_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423742.1\|551663_553034_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001297479.1\|553037_553679_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000004751.1\|553714_554821_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_4

777405 : 880850

100

Escherichia_phage(48.28%)

lysis,tRNA,tail,terminase,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020233353.1\|777405_778338_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.3e-17	39.5
WP_000387388.1\|779669_780653_+	zinc transporter ZntB	NA	NA	NA	NA
WP_000123748.1\|781130_782504_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_001523172.1\|782632_783568_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
WP_000040839.1\|783619_784855_-	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	3.8e-241	99.5
WP_000079604.1\|784856_785072_-	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_001302840.1\|785171_785360_-	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
WP_001443846.1\|785397_785547_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	2.5e-22	95.9
WP_000166313.1\|785602_786412_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	4.0e-106	71.5
WP_000105140.1\|786404_789005_-	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	6.1e-249	63.5
WP_001344816.1\|789106_789382_-	hypothetical protein	A0A0U2QW85	Escherichia_phage	4.0e-42	95.6
WP_001352098.1\|789456_789627_-	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
WP_000560223.1\|789626_789848_-	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_001312793.1\|790289_790778_+	superinfection exclusion protein B	NA	NA	NA	NA
WP_001169151.1\|790774_790930_-	YdaF family protein	M4QQ57	Salicola_phage	6.1e-08	55.3
WP_001326317.1\|790940_791120_-	hypothetical protein	NA	NA	NA	NA
WP_000233319.1\|791362_791782_-	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	5.5e-19	46.5
WP_099004454.1\|791861_792116_+	hypothetical protein	A0A2I6PIE5	Escherichia_phage	2.2e-18	60.3
WP_000693803.1\|792112_792535_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	1.3e-68	92.9
WP_001396581.1\|792612_793401_+	hypothetical protein	G9L6A8	Escherichia_phage	2.0e-41	64.3
WP_020233967.1\|793407_794154_+	ATP-binding protein	V5UQI5	Shigella_phage	1.1e-110	78.5
WP_000450716.1\|794176_794938_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	3.4e-115	87.4
WP_029702111.1\|794953_795376_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	7.4e-64	90.6
WP_000137958.1\|795537_796041_+	hypothetical protein	Q9G078	Enterobacteria_phage	4.3e-18	39.7
WP_000200358.1\|796161_796935_-	KilA-N domain-containing protein	A0A1L2BWW1	Bacteriophage	9.6e-09	42.6
WP_001445775.1\|797457_797583_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	4.0e-10	90.2
WP_001445776.1\|797665_798007_-	DUF1971 domain-containing protein	NA	NA	NA	NA
WP_000940344.1\|798874_799474_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.9e-106	92.0
WP_000228032.1\|799473_799764_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	7.4e-47	88.5
WP_000640106.1\|799760_800303_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.8e-77	76.3
WP_001208722.1\|800524_801094_+	hypothetical protein	NA	NA	NA	NA
WP_001328752.1\|801062_801365_-	hypothetical protein	NA	NA	NA	NA
WP_000781775.1\|801441_801783_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	6.2e-53	90.1
WP_023153991.1\|801786_802263_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	5.0e-85	95.6
WP_001228696.1\|802479_802665_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.8e-15	98.2
WP_001097895.1\|802861_804319_+	Trk system potassium uptake protein TrkG	NA	NA	NA	NA
WP_001291105.1\|804456_805248_+	ParB N-terminal domain-containing protein	R4TG31	Halovirus	2.8e-48	40.2
WP_020233805.1\|805240_806173_+	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.1e-83	54.9
WP_000613571.1\|806108_806360_+	hypothetical protein	NA	NA	NA	NA
WP_000089448.1\|806363_807458_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	4.5e-113	80.5
WP_000625348.1\|807438_808740_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	59.6
WP_000763701.1\|808742_810149_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	3.0e-186	69.0
WP_001363932.1\|810132_811245_+	hypothetical protein	I6PD76	Cronobacter_phage	7.1e-114	54.5
WP_029702112.1\|811349_812114_+	hypothetical protein	G8C7P6	Escherichia_phage	9.0e-84	64.2
WP_020233804.1\|812212_813352_+	hypothetical protein	G8C7P7	Escherichia_phage	9.7e-159	75.0
WP_000908084.1\|813394_813571_+	hypothetical protein	G8C7P8	Escherichia_phage	4.7e-12	62.3
WP_000634214.1\|813574_813970_+	hypothetical protein	NA	NA	NA	NA
WP_000524260.1\|813969_814353_+	hypothetical protein	A0A0P0I456	Acinetobacter_phage	2.2e-14	39.4
WP_001029815.1\|814353_814734_+	hypothetical protein	A0A059VF88	Pseudomonas_phage	1.1e-18	44.4
WP_000673077.1\|814730_815123_+	hypothetical protein	NA	NA	NA	NA
WP_001328756.1\|815149_816112_+	hypothetical protein	A0A059VG08	Pseudomonas_phage	8.4e-55	38.6
WP_122452218.1\|816262_816622_+	hypothetical protein	NA	NA	NA	NA
WP_032139919.1\|816729_816930_+	hypothetical protein	NA	NA	NA	NA
WP_023153989.1\|817093_820327_+\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	7.4e-103	33.0
WP_000024051.1\|820319_820658_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	4.0e-28	50.0
WP_001152432.1\|820657_821356_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-125	93.5
WP_064755709.1\|821361_822105_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.0e-145	96.3
WP_049286672.1\|822041_822644_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-88	85.6
WP_021523093.1\|822704_826184_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.6
WP_001542091.1\|826251_826851_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	9.8e-102	91.5
WP_042099016.1\|826915_829291_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A1X7QGG5	Escherichia_phage	1.8e-167	69.0
WP_000654155.1\|829290_829572_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.4e-18	50.0
WP_001314683.1\|829581_830622_+\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	2.9e-125	67.9
WP_001405873.1\|830664_830958_+	hypothetical protein	NA	NA	NA	NA
WP_000354607.1\|831503_832298_-	hypothetical protein	NA	NA	NA	NA
WP_000968125.1\|832770_833628_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_001101728.1\|833624_834482_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_033559630.1\|834478_835306_-	iron/manganese ABC transporter ATP-binding protein SitB	G9BWD6	Planktothrix_phage	6.4e-11	28.5
WP_000286865.1\|835305_836220_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_001295593.1\|836804_837239_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
WP_000837924.1\|837379_838513_-	porin OmpN	Q1MVN1	Enterobacteria_phage	8.3e-118	58.8
WP_021517097.1\|838879_842404_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_001295715.1\|842677_842944_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_001523197.1\|842940_843363_-	heat shock protein HslJ	NA	NA	NA	NA
WP_000762229.1\|843473_844463_-	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
WP_020233705.1\|844670_847310_+	YdbH family protein	NA	NA	NA	NA
WP_000698145.1\|847306_847492_+	YnbE family lipoprotein	NA	NA	NA	NA
WP_001523200.1\|847499_847823_+	YdbL family protein	NA	NA	NA	NA
WP_059321765.1\|851896_854305_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_021523074.1\|854512_855373_+	pyridoxine 4-dehydrogenase	NA	NA	NA	NA
WP_001523206.1\|855436_857743_+	DUF2773 domain-containing bactofilin	NA	NA	NA	NA
WP_000177498.1\|857913_858519_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_021523075.1\|859430_861188_+	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_020233384.1\|861177_862494_+	phosphatase PAP2/dual specificity phosphatase family protein	NA	NA	NA	NA
WP_000048963.1\|862547_863153_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_021517100.1\|863353_867256_+	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
WP_001523214.1\|867540_867879_+	hypothetical protein	NA	NA	NA	NA
WP_001314706.1\|867865_868315_+	hypothetical protein	NA	NA	NA	NA
WP_000343026.1\|868434_868812_+	hypothetical protein	NA	NA	NA	NA
WP_001027943.1\|868927_869728_+	YdcF family protein	NA	NA	NA	NA
WP_000115969.1\|869924_871364_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_000048645.1\|871405_872407_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_001390056.1\|872595_873126_+	cytochrome b561	A0A0U2QLA7	Escherichia_phage	2.0e-18	43.9
WP_000731851.1\|873370_873544_+	hypothetical protein	A0A0R6PI25	Moraxella_phage	4.4e-07	59.6
WP_029702060.1\|873615_873765_-	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_001523216.1\|874163_875804_+	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_000414564.1\|875841_876765_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001523218.1\|876981_878325_+	VOC family protein	NA	NA	NA	NA
WP_033559627.1\|878549_880205_+	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_000526135.1\|880391_880850_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1028652 : 1094017

Enterobacteria_phage(40.0%)

head,lysis,capsid,tail,portal,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099004457.1\|1028652_1030113_-	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	3.9e-43	29.7
WP_029701979.1\|1030201_1031485_-	MHS family MFS transporter	NA	NA	NA	NA
WP_120795384.1\|1032088_1032202_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|1032270_1032504_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000086527.1\|1032820_1033411_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000355609.1\|1033638_1033932_-	hypothetical protein	NA	NA	NA	NA
WP_000235967.1\|1033942_1034647_-\|tail	tail fiber domain-containing protein	A0A1X7QGH6	Escherichia_phage	1.2e-58	61.7
WP_000654154.1\|1034656_1034938_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.2e-17	47.8
WP_032152843.1\|1034934_1037334_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M194	Enterobacteria_phage	3.9e-133	55.3
WP_021523093.1\|1038064_1041544_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.6
WP_049286672.1\|1041604_1042207_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	8.1e-88	85.6
WP_032153655.1\|1042143_1042887_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	9.5e-147	96.7
WP_001551186.1\|1042892_1043591_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.4
WP_000847345.1\|1043590_1043920_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
WP_032153656.1\|1043916_1046478_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	95.9
WP_000459457.1\|1046470_1046905_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_000479153.1\|1046886_1047309_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	6.7e-73	100.0
WP_001349920.1\|1047324_1048065_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	7.8e-133	100.0
WP_000683128.1\|1048072_1048468_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	6.5e-70	99.2
WP_033559746.1\|1048464_1049043_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.3e-79	99.5
WP_000752979.1\|1049054_1049408_-\|head,tail	head-tail joining protein	A0A0K2FJB7	Enterobacteria_phage	2.0e-62	100.0
WP_020233914.1\|1049419_1049818_-	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	2.3e-62	98.5
WP_000063277.1\|1049859_1050885_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.7e-192	99.7
WP_001708751.1\|1050939_1051272_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_020233915.1\|1051281_1052601_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.2e-231	97.7
WP_001356819.1\|1052581_1054183_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
WP_000198149.1\|1054179_1054386_-	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027269.1\|1054382_1056308_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.5
WP_000453587.1\|1056282_1056828_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_001368374.1\|1057216_1057450_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	84.1
WP_000373090.1\|1057507_1057918_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.5e-56	79.4
WP_001019606.1\|1058069_1058243_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001309517.1\|1058414_1058570_-	hypothetical protein	NA	NA	NA	NA
WP_120795388.1\|1058649_1058715_-	Qin prophage; protein YnfR	NA	NA	NA	NA
WP_138069336.1\|1058717_1058894_-	cold-shock protein	NA	NA	NA	NA
WP_000066495.1\|1059692_1059905_-	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_001071769.1\|1060267_1060765_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
WP_001092971.1\|1060761_1061295_-	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
WP_000189916.1\|1061291_1061603_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
WP_000839590.1\|1061607_1061823_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.1e-31	94.4
WP_000526135.1\|1062379_1062838_-\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_162895303.1\|1063174_1064387_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	5.5e-168	98.6
WP_000066484.1\|1064601_1064817_-	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
WP_000087756.1\|1065117_1065330_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_120795389.1\|1065384_1065474_+	Qin prophage; protein YnfS	NA	NA	NA	NA
WP_001047135.1\|1065751_1066504_-	antitermination protein	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
WP_001265199.1\|1066517_1067567_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-112	57.0
WP_012304870.1\|1067568_1067847_-	hypothetical protein	NA	NA	NA	NA
WP_000980994.1\|1067913_1068165_-	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|1068381_1068537_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000323025.1\|1068608_1068896_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|1068895_1069135_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_001326990.1\|1069159_1069465_+	hypothetical protein	NA	NA	NA	NA
WP_001301033.1\|1069667_1070000_+	protein FlxA	NA	NA	NA	NA
WP_033559771.1\|1070436_1071750_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000915483.1\|1072233_1073256_-	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_001265627.1\|1073258_1073873_-	hypothetical protein	NA	NA	NA	NA
WP_021523102.1\|1074081_1074747_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_001151242.1\|1074949_1075348_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	7.7e-63	93.9
WP_000054487.1\|1075388_1076354_-	hypothetical protein	U5P0A0	Shigella_phage	2.6e-56	60.8
WP_000705355.1\|1076334_1076856_-	hypothetical protein	NA	NA	NA	NA
WP_000921596.1\|1076839_1077067_-	transcriptional regulator	NA	NA	NA	NA
WP_000381212.1\|1077147_1077555_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	7.2e-32	51.9
WP_000379575.1\|1077723_1077879_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_000344950.1\|1077880_1078456_+	hypothetical protein	NA	NA	NA	NA
WP_000854559.1\|1078942_1079131_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001083276.1\|1079127_1079319_+\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000048363.1\|1079412_1081884_+	exonuclease	A0A192Y6E0	Salmonella_phage	1.2e-57	56.1
WP_000005552.1\|1081956_1082208_+	excisionase family protein	S4TND0	Salmonella_phage	2.2e-15	50.0
WP_001339397.1\|1082278_1082956_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_000624622.1\|1082955_1083303_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_029392005.1\|1083322_1084894_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-169	58.5
WP_021523105.1\|1084949_1086230_+	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	3.9e-156	62.6
WP_001389342.1\|1086231_1086360_-	hypothetical protein	NA	NA	NA	NA
WP_000836037.1\|1086417_1087437_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001295394.1\|1087448_1088663_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_001314753.1\|1088868_1089195_-	YnfA family protein	A0A218MNG8	uncultured_virus	2.2e-23	54.5
WP_000705205.1\|1089329_1089671_+	DUF1283 family protein	NA	NA	NA	NA
WP_001138584.1\|1089705_1090266_+	spermidine N1-acetyltransferase	NA	NA	NA	NA
WP_001445899.1\|1090268_1090979_-	YnfC family lipoprotein	NA	NA	NA	NA
WP_001295396.1\|1091086_1091392_+	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_001551145.1\|1091590_1094017_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.7e-213	49.2

DBSCAN-SWA_6

1579982 : 1587500

Escherichia_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021523155.1\|1579982_1580531_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.4e-48	54.4
WP_085695534.1\|1580535_1581414_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	8.7e-107	64.5
WP_021523157.1\|1581471_1582371_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.7e-28	35.1
WP_001515524.1\|1582370_1583456_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.3e-101	54.2
WP_021523158.1\|1583827_1584721_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_021523159.1\|1584952_1585948_-	SDR family oxidoreductase	A0A1V0QG29	Shearwaterpox_virus	2.5e-09	26.0
WP_021523160.1\|1586105_1587500_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	9.8e-20	31.9

DBSCAN-SWA_7

1634905 : 1699293

Escherichia_phage(39.62%)

integrase,lysis,head,tRNA,capsid,tail,protease,portal,terminase,holin,plate

attL 1644466:1644484|attR 1704134:1704152

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000675148.1\|1634905_1636309_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	2.7e-33	29.4
WP_000137877.1\|1636305_1637028_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	3.7e-31	33.6
WP_000929408.1\|1637207_1637540_+	YegP family protein	NA	NA	NA	NA
WP_001520824.1\|1637687_1639049_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.6e-216	99.2
WP_000468308.1\|1639321_1639540_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_000882966.1\|1639621_1640785_-	phage late control D family protein	U5N3V4	Enterobacteria_phage	1.8e-205	99.7
WP_001565024.1\|1640784_1641264_-\|tail	phage tail protein	O64315	Escherichia_phage	9.6e-84	98.1
WP_021523174.1\|1641278_1643726_-\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	0.0e+00	95.7
WP_000785970.1\|1643718_1643838_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_020233494.1\|1643870_1644146_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.2e-40	98.9
WP_001251412.1\|1644202_1644721_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	3.2e-93	99.4
1644466:1644484	attL	NA	NA	NA	NA
WP_033559300.1\|1644733_1645924_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.4e-223	99.0
WP_021523176.1\|1646253_1646799_-	hypothetical protein	Q858S7	Enterobacteria_phage	1.1e-96	98.9
WP_021523177.1\|1647068_1647596_-\|tail	tail fiber assembly protein	A0A0C4UR05	Shigella_phage	4.9e-89	92.6
WP_021523178.1\|1647597_1649619_-\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	2.7e-260	64.5
WP_001285325.1\|1649629_1650160_-\|tail	phage tail protein I	U5N0U8	Enterobacteria_phage	2.3e-102	100.0
WP_001121453.1\|1650152_1651061_-\|plate	baseplate assembly protein	U5N3T9	Enterobacteria_phage	4.4e-162	99.7
WP_000127164.1\|1651065_1651413_-	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	1.3e-58	100.0
WP_020233499.1\|1651409_1652045_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	1.2e-113	99.5
WP_021523179.1\|1652128_1652914_+	hypothetical protein	NA	NA	NA	NA
WP_085695613.1\|1652985_1653438_-	phage virion morphogenesis protein	A0A0F7LDR6	Escherichia_phage	5.3e-76	98.7
WP_001774102.1\|1653430_1653898_-\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	9.7e-81	98.1
WP_072174950.1\|1653860_1654034_-\|lysis	phage lysis protein	Q7Y4E1	Escherichia_virus	9.8e-23	91.2
WP_033560494.1\|1654005_1654431_-\|lysis	LysB family phage lysis regulatory protein	Q858W0	Yersinia_virus	1.5e-67	98.6
WP_000736597.1\|1654418_1654844_-	hypothetical protein	A0A0F7LBP4	Escherichia_phage	4.7e-58	95.0
WP_023148834.1\|1654858_1655356_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	1.2e-92	99.4
WP_001476703.1\|1655355_1655601_-\|holin	phage holin family protein	A0A0F7LA12	Escherichia_phage	4.5e-37	100.0
WP_000846409.1\|1655639_1655843_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_033559479.1\|1655842_1656352_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	7.3e-90	98.8
WP_000203438.1\|1656451_1657195_-\|terminase	terminase endonuclease subunit	Q94MK6	Enterobacteria_phage	1.6e-122	97.6
WP_038817499.1\|1658325_1659150_-\|capsid	GPO family capsid scaffolding protein	Q778Z1	Enterobacteria_phage	2.0e-129	98.9
WP_048219351.1\|1661123_1662158_+\|portal	phage portal protein	Q858W8	Yersinia_virus	7.1e-201	99.4
WP_023148838.1\|1662670_1664035_+	FRG domain-containing protein	Q9AZ51	Lactococcus_phage	6.7e-05	34.1
WP_023148839.1\|1664143_1665094_-	RNA-directed DNA polymerase	E5E3S8	Burkholderia_phage	4.6e-37	40.8
WP_016239054.1\|1665059_1665380_-	helix-turn-helix transcriptional regulator	E5E3S9	Burkholderia_phage	5.9e-13	38.7
WP_001754918.1\|1665416_1665572_-	hypothetical protein	NA	NA	NA	NA
WP_023148841.1\|1665988_1668277_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.2
WP_000027664.1\|1668266_1668542_-	DUF5405 family protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
WP_023148842.1\|1668538_1668763_-	TraR/DksA family transcriptional regulator	A0A0F7LDI3	Escherichia_phage	5.0e-35	98.6
WP_001277957.1\|1668762_1669065_-	DUF5405 family protein	A0A0F7LDT6	Escherichia_phage	2.2e-46	99.0
WP_000557703.1\|1669064_1669289_-	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_000217677.1\|1669353_1669854_-	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
WP_000022051.1\|1670031_1670388_-	hypothetical protein	A0A0F7LDH4	Escherichia_phage	1.1e-63	100.0
WP_000072552.1\|1670492_1670804_+	helix-turn-helix transcriptional regulator	Q1JS25	Enterobacteria_phage	4.3e-53	100.0
WP_000023391.1\|1670897_1671893_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	7.1e-190	99.7
WP_000067977.1\|1671924_1672722_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.3e-21	26.6
WP_000918505.1\|1672931_1674362_-	amino acid permease	NA	NA	NA	NA
WP_000109288.1\|1674571_1675720_-	MFS transporter	NA	NA	NA	NA
WP_001522756.1\|1676034_1676661_+	hydrolase	NA	NA	NA	NA
WP_000534633.1\|1676696_1677560_-	dimethyl sulfoxide reductase anchor subunit DmsC	NA	NA	NA	NA
WP_000213098.1\|1677561_1678179_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
WP_000850305.1\|1678189_1680634_-	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.0e-221	49.8
WP_000886683.1\|1680872_1682165_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
WP_000067755.1\|1682255_1683599_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	2.1e-80	40.8
WP_001522754.1\|1683609_1684221_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_001522753.1\|1684379_1688447_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
WP_000228473.1\|1688581_1689076_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_001522752.1\|1689620_1690586_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.1e-62	44.6
WP_001043595.1\|1690708_1692475_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	7.0e-23	24.3
WP_001522751.1\|1692475_1694197_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	2.2e-21	25.2
WP_001241678.1\|1694238_1694943_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|1695227_1695446_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_000934041.1\|1696665_1698942_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_000520781.1\|1698972_1699293_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
1704134:1704152	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2798537 : 2842447

Stx2-converting_phage(25.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001298859.1\|2798537_2800079_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|2800093_2800840_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_001295723.1\|2801503_2801872_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000692345.1\|2802034_2802256_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001186775.1\|2802318_2802795_-	RadC family protein	NA	NA	NA	NA
WP_001234656.1\|2803623_2804442_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	1.6e-46	39.7
WP_001323397.1\|2804596_2804755_-	DUF905 family protein	NA	NA	NA	NA
WP_099004470.1\|2804825_2807945_-	autotransporter adhesin Ag43	NA	NA	NA	NA
WP_001069701.1\|2808317_2809190_-	GTPase family protein	NA	NA	NA	NA
WP_001297234.1\|2810420_2811905_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_000813451.1\|2812226_2812829_-	hypothetical protein	NA	NA	NA	NA
WP_001322501.1\|2812923_2813202_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_000221515.1\|2814653_2815223_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_000270981.1\|2815482_2815884_+	hypothetical protein	NA	NA	NA	NA
WP_001221615.1\|2815871_2816306_+	hypothetical protein	NA	NA	NA	NA
WP_001171523.1\|2816660_2817041_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612591.1\|2817037_2817385_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_000998019.1\|2817434_2818820_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.4e-259	89.3
WP_000823243.1\|2819058_2820417_-	esterase-like activity of phytase family protein	NA	NA	NA	NA
WP_000555341.1\|2821167_2821425_-	hypothetical protein	NA	NA	NA	NA
WP_001283626.1\|2823174_2823696_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_001068913.1\|2823692_2824646_+	fec operon regulator FecR	NA	NA	NA	NA
WP_033559184.1\|2824732_2827057_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_000879164.1\|2827101_2828004_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_000125187.1\|2828000_2828999_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_000684855.1\|2828995_2829952_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	2.4e-17	26.1
WP_000175457.1\|2829952_2830720_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	6.4e-13	24.8
WP_000177057.1\|2831276_2831534_-	hypothetical protein	NA	NA	NA	NA
WP_085947616.1\|2832467_2833623_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.6e-68	45.1
WP_001293436.1\|2833777_2835775_+\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	7.4e-21	25.9
WP_000625671.1\|2835837_2836251_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_085948656.1\|2836185_2837353_-\|transposase	IS3-like element IS911 family transposase	Q716C2	Shigella_phage	1.8e-184	99.3
WP_000254999.1\|2837666_2837924_+	hypothetical protein	NA	NA	NA	NA
WP_000594405.1\|2837976_2838102_-	hypothetical protein	NA	NA	NA	NA
WP_000611568.1\|2838144_2839263_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000179691.1\|2839274_2840492_-	MFS transporter	NA	NA	NA	NA
WP_024166525.1\|2841100_2842447_+\|transposase	IS4-like element IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

4401515 : 4454516

Stx2-converting_phage(30.0%)

integrase,lysis,protease,transposase

attL 4452502:4452516|attR 4461094:4461108

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000998107.1\|4401515_4403054_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.6e-281	93.8
WP_000624646.1\|4404181_4404532_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	5.4e-36	62.1
WP_000435657.1\|4404528_4404954_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	5.2e-33	73.2
WP_001149834.1\|4405615_4406533_+	N-acetylneuraminate lyase	NA	NA	NA	NA
WP_000629094.1\|4406566_4407442_+	N-acetylmannosamine kinase	NA	NA	NA	NA
WP_000376547.1\|4407490_4408963_+	MFS transporter	Q6JIH2	Burkholderia_virus	2.2e-06	22.7
WP_000948500.1\|4408966_4409797_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001296386.1\|4409842_4410553_+	N-acetylneuraminic acid channel protein	NA	NA	NA	NA
WP_000865295.1\|4410565_4411675_+	N-acetylneuraminate epimerase	NA	NA	NA	NA
WP_001305022.1\|4411724_4412660_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001282578.1\|4412695_4413430_-	transcriptional regulator NanR	NA	NA	NA	NA
WP_000274668.1\|4413529_4414516_+	hypothetical protein	Q08JA2	Stx2-converting_phage	4.0e-108	57.7
WP_103103189.1\|4414667_4415895_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	7.2e-168	94.4
WP_001223344.1\|4416395_4418486_+	bifunctional siderophore receptor/adhesin Iha	A0A0P0I887	Acinetobacter_phage	2.6e-08	31.5
WP_001296383.1\|4419347_4419590_+	hypothetical protein	NA	NA	NA	NA
WP_001296382.1\|4419880_4420240_+	hypothetical protein	NA	NA	NA	NA
WP_000266542.1\|4420243_4420459_+	hypothetical protein	NA	NA	NA	NA
WP_001254932.1\|4425239_4426391_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_001034083.1\|4426987_4430875_-\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
WP_011076574.1\|4431124_4431268_+	hypothetical protein	NA	NA	NA	NA
WP_000973516.1\|4431818_4434020_-	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_000750130.1\|4434101_4435379_-	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001015715.1\|4435375_4437118_-	aerobactin synthase IucC	NA	NA	NA	NA
WP_001287500.1\|4437117_4438065_-	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001296374.1\|4438065_4439790_-	aerobactin synthase IucA	NA	NA	NA	NA
WP_000074472.1\|4439925_4441119_+	MFS transporter	NA	NA	NA	NA
WP_001296373.1\|4441836_4442265_-	DUF417 family protein	NA	NA	NA	NA
WP_000109147.1\|4442304_4442865_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001110186.1\|4442906_4443167_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001513409.1\|4445000_4445114_+\|lysis	lysis protein	NA	NA	NA	NA
WP_001296368.1\|4446981_4447203_-	pap operon regulatory protein PapI	NA	NA	NA	NA
WP_001774069.1\|4449706_4450258_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000147017.1\|4451951_4452995_-	hypothetical protein	NA	NA	NA	NA
4452502:4452516	attL	NA	NA	NA	NA
WP_001218869.1\|4453250_4454516_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_001218869.1\|4453250_4454516_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
4461094:4461108	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4734763 : 4741903

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278994.1\|4734763_4735402_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_001521147.1\|4735398_4736661_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
WP_000847993.1\|4736657_4737566_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.1e-117	76.5
WP_001295181.1\|4737761_4738529_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_001141345.1\|4738579_4739236_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	5.0e-51	47.0
WP_001272917.1\|4739341_4741903_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	9.2e-32	20.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023961

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023959

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP023960

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection